Clone Name | rbasd19d09 |
---|---|
Clone Library Name | barley_pub |
>gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0081F16 map E50055S, complete sequence Length = 148220 Score = 79.8 bits (40), Expect = 1e-11 Identities = 115/140 (82%) Strand = Plus / Minus Query: 371 ctcaagctctagctccttgtctcttagctgaatttccaaatgcttatgctgaaacatctt 430 |||||| ||||||||||||| |||||| | || || || |||||| ||||| |||| | Sbjct: 80307 ctcaagttctagctccttgtgtcttaggtcaagctcaaaccgcttattctgaagcatcat 80248 Query: 431 ttgttcattctccaatgccagcctttcaatttccctgtccttcttcatcctaaatctctc 490 ||||||||||||||| |||| | |||| | |||| |||||| ||| |||| || |||| Sbjct: 80247 ttgttcattctccaacgccaacttttccaattccaagtccttgttcttcctgaacatctc 80188 Query: 491 ccacttgagacgttgttttg 510 ||||||||||||||| |||| Sbjct: 80187 ccacttgagacgttgctttg 80168
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 79.8 bits (40), Expect = 1e-11 Identities = 115/140 (82%) Strand = Plus / Minus Query: 371 ctcaagctctagctccttgtctcttagctgaatttccaaatgcttatgctgaaacatctt 430 |||||| ||||||||||||| |||||| | || || || |||||| ||||| |||| | Sbjct: 3074937 ctcaagttctagctccttgtgtcttaggtcaagctcaaaccgcttattctgaagcatcat 3074878 Query: 431 ttgttcattctccaatgccagcctttcaatttccctgtccttcttcatcctaaatctctc 490 ||||||||||||||| |||| | |||| | |||| |||||| ||| |||| || |||| Sbjct: 3074877 ttgttcattctccaacgccaacttttccaattccaagtccttgttcttcctgaacatctc 3074818 Query: 491 ccacttgagacgttgttttg 510 ||||||||||||||| |||| Sbjct: 3074817 ccacttgagacgttgctttg 3074798
>dbj|AK101154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027D16, full insert sequence Length = 2583 Score = 79.8 bits (40), Expect = 1e-11 Identities = 115/140 (82%) Strand = Plus / Minus Query: 371 ctcaagctctagctccttgtctcttagctgaatttccaaatgcttatgctgaaacatctt 430 |||||| ||||||||||||| |||||| | || || || |||||| ||||| |||| | Sbjct: 2236 ctcaagttctagctccttgtgtcttaggtcaagctcaaaccgcttattctgaagcatcat 2177 Query: 431 ttgttcattctccaatgccagcctttcaatttccctgtccttcttcatcctaaatctctc 490 ||||||||||||||| |||| | |||| | |||| |||||| ||| |||| || |||| Sbjct: 2176 ttgttcattctccaacgccaacttttccaattccaagtccttgttcttcctgaacatctc 2117 Query: 491 ccacttgagacgttgttttg 510 ||||||||||||||| |||| Sbjct: 2116 ccacttgagacgttgctttg 2097
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 79.8 bits (40), Expect = 1e-11 Identities = 115/140 (82%) Strand = Plus / Minus Query: 371 ctcaagctctagctccttgtctcttagctgaatttccaaatgcttatgctgaaacatctt 430 |||||| ||||||||||||| |||||| | || || || |||||| ||||| |||| | Sbjct: 3083968 ctcaagttctagctccttgtgtcttaggtcaagctcaaaccgcttattctgaagcatcat 3083909 Query: 431 ttgttcattctccaatgccagcctttcaatttccctgtccttcttcatcctaaatctctc 490 ||||||||||||||| |||| | |||| | |||| |||||| ||| |||| || |||| Sbjct: 3083908 ttgttcattctccaacgccaacttttccaattccaagtccttgttcttcctgaacatctc 3083849 Query: 491 ccacttgagacgttgttttg 510 ||||||||||||||| |||| Sbjct: 3083848 ccacttgagacgttgctttg 3083829
>gb|AC129335.4| Mus musculus BAC clone RP23-109H7 from chromosome 1, complete sequence Length = 201274 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 428 cttttgttcattctccaatgccagcctt 455 |||||| ||||||||||||||||||||| Sbjct: 60766 cttttgatcattctccaatgccagcctt 60739
>emb|CR792443.13| Zebrafish DNA sequence from clone DKEY-52K1 in linkage group 13, complete sequence Length = 217981 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 aagaaaaagaagaaaatcattt 158 |||||||||||||||||||||| Sbjct: 32318 aagaaaaagaagaaaatcattt 32297
>ref|XM_789741.1| PREDICTED: Strongylocentrotus purpuratus similar to regulator of telomere elongation helicase 1 isoform 2 (LOC590124), partial mRNA Length = 693 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatcat 156 |||||||||||||||||||||| Sbjct: 575 ccaagaaaaagaagaaaatcat 596
>ref|XM_967827.1| PREDICTED: Tribolium castaneum similar to MAGUK p55 subfamily member 6 (Protein associated with Lin-7 2) (Dlgh4 protein) (P55T protein) (LOC661679), mRNA Length = 1677 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 aagaaaaagaagaaaatcattt 158 |||||||||||||||||||||| Sbjct: 877 aagaaaaagaagaaaatcattt 898
>ref|NM_105547.2| Arabidopsis thaliana unknown protein AT1G68740 mRNA, complete cds Length = 2724 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 gttctttcttgatcaaccata 286 ||||||||||||||||||||| Sbjct: 2520 gttctttcttgatcaaccata 2540
>gb|DQ508919.1| Influenza B virus (B/Hong Kong/05/1972) polymerase PB1 (PB1) gene, complete cds Length = 2259 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 agaagaaaatcatttcaggtt 164 ||||||||||||||||||||| Sbjct: 547 agaagaaaatcatttcaggtt 527
>emb|Z54216.1|CET24H10 Caenorhabditis elegans Cosmid T24H10, complete sequence Length = 34668 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 628 tatccaatgtgatgccatgcg 648 ||||||||||||||||||||| Sbjct: 20638 tatccaatgtgatgccatgcg 20658
>emb|AL596268.5| Human DNA sequence from clone RP11-504E21 on chromosome X Contains a MAGE family pseudogene, complete sequence Length = 113335 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 425 catcttttgttcattctccaa 445 ||||||||||||||||||||| Sbjct: 108680 catcttttgttcattctccaa 108660
>gb|AC078862.14| Homo sapiens 12 BAC RP11-139B1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 57000 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 127 aaagacttccaagaaaaagaagaaa 151 |||||| |||||||||||||||||| Sbjct: 3749 aaagacctccaagaaaaagaagaaa 3725
>gb|AY057574.1| Arabidopsis thaliana At1g68740/F24J5.8 mRNA, complete cds Length = 2605 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 gttctttcttgatcaaccata 286 ||||||||||||||||||||| Sbjct: 2520 gttctttcttgatcaaccata 2540
>gb|AC011914.9|AC011914 Arabidopsis thaliana chromosome 1 BAC F14K14 genomic sequence, complete sequence Length = 96808 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 gttctttcttgatcaaccata 286 ||||||||||||||||||||| Sbjct: 84835 gttctttcttgatcaaccata 84855
>gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, complete sequence Length = 199954 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 gtttttgttcttggatctgca 540 ||||||||||||||||||||| Sbjct: 134244 gtttttgttcttggatctgca 134264
>gb|AC018717.11| Homo sapiens BAC clone RP11-505H14 from 2, complete sequence Length = 172639 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 aagaaaaagaagaaaatcatt 157 ||||||||||||||||||||| Sbjct: 25654 aagaaaaagaagaaaatcatt 25634
>dbj|AP007256.1| Danio rerio DNA, clone:DKEY-188F22, complete sequence Length = 155274 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 128 aagacttccaagaaaaagaagaaaa 152 ||||||||||||||||| ||||||| Sbjct: 105870 aagacttccaagaaaaaaaagaaaa 105846
>gb|AC009430.2|AC009430 Homo sapiens, clone RP11-45O17, complete sequence Length = 156454 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 425 catcttttgttcattctccaa 445 ||||||||||||||||||||| Sbjct: 154921 catcttttgttcattctccaa 154941
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome Length = 1993564 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 accatattgcaaaccaaaact 328 ||||||||||||||||||||| Sbjct: 1637022 accatattgcaaaccaaaact 1637042
>gb|AC008075.2|F24J5 Arabidopsis thaliana chromosome 1 BAC F24J5 sequence, complete sequence Length = 98942 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 gttctttcttgatcaaccata 286 ||||||||||||||||||||| Sbjct: 16571 gttctttcttgatcaaccata 16591
>gb|AC116797.11| Mus musculus chromosome 13, clone RP24-327I15, complete sequence Length = 145747 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 tttcaatttccctgtccttct 474 ||||||||||||||||||||| Sbjct: 99792 tttcaatttccctgtccttct 99772
>emb|CT033754.8| Mouse DNA sequence from clone RP23-174E11 on chromosome 9, complete sequence Length = 165339 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 aaaaagaagaaaatcatttcaggtt 164 |||||||||||||||| |||||||| Sbjct: 77162 aaaaagaagaaaatcaattcaggtt 77186
>ref|NM_133535.1| Rattus norvegicus COBW domain containing 1 (Cbwd1), mRNA Length = 1623 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatc 154 |||||||||||||||||||| Sbjct: 151 ccaagaaaaagaagaaaatc 170
>gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, complete sequence Length = 166451 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 aaaagacttccaagaaaaag 145 |||||||||||||||||||| Sbjct: 91297 aaaagacttccaagaaaaag 91316
>ref|NM_016341.2| Homo sapiens phospholipase C, epsilon 1 (PLCE1), mRNA Length = 7609 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatc 154 |||||||||||||||||||| Sbjct: 3486 ccaagaaaaagaagaaaatc 3505
>gb|AY617165.1| Sterkiella histriomuscorum clone UGC1O0001_A06_R genomic sequence Length = 1486 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 aaagacttccaagaaaaaga 146 |||||||||||||||||||| Sbjct: 1145 aaagacttccaagaaaaaga 1126
>gb|AC102168.9| Mus musculus chromosome 7, clone RP23-452N21, complete sequence Length = 171392 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 agaaaagacttccaagaaaa 143 |||||||||||||||||||| Sbjct: 103312 agaaaagacttccaagaaaa 103293
>gb|AC158552.5| Mus musculus chromosome 3, clone RP23-97D22, complete sequence Length = 235709 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tccaagaaaaagaagaaaat 153 |||||||||||||||||||| Sbjct: 152123 tccaagaaaaagaagaaaat 152104
>ref|XM_597245.2| PREDICTED: Bos taurus similar to pancreas-enriched phospholipase C (LOC519037), partial mRNA Length = 3910 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatc 154 |||||||||||||||||||| Sbjct: 816 ccaagaaaaagaagaaaatc 835
>ref|XM_425738.1| PREDICTED: Gallus gallus similar to RIKEN cDNA A930027K05 gene (LOC428180), mRNA Length = 1962 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 catcttttgttcattctcca 444 |||||||||||||||||||| Sbjct: 1074 catcttttgttcattctcca 1055
>ref|XM_416757.1| PREDICTED: Gallus gallus similar to periodic tryptophan protein 2 homolog; WD-repeat protein p103 (LOC418551), partial mRNA Length = 2616 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 atcctaaatctctcccactt 496 |||||||||||||||||||| Sbjct: 2430 atcctaaatctctcccactt 2411
>gb|AY339628.1| Homo sapiens plasticity related gene 4 mRNA, complete cds Length = 2380 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttccaagaaaaagaagaaaa 152 |||||||||||||||||||| Sbjct: 2174 ttccaagaaaaagaagaaaa 2155
>ref|XM_853995.1| PREDICTED: Canis familiaris similar to pancreas-enriched phospholipase C, transcript variant 2 (LOC486808), mRNA Length = 6882 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatc 154 |||||||||||||||||||| Sbjct: 3278 ccaagaaaaagaagaaaatc 3297
>ref|XM_543937.2| PREDICTED: Canis familiaris similar to pancreas-enriched phospholipase C, transcript variant 1 (LOC486808), mRNA Length = 6930 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatc 154 |||||||||||||||||||| Sbjct: 3278 ccaagaaaaagaagaaaatc 3297
>ref|XM_384628.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04452.1) partial mRNA Length = 1998 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 gttcattctccaatgccagc 452 |||||||||||||||||||| Sbjct: 983 gttcattctccaatgccagc 1002
>gb|AC121946.3| Mus musculus BAC clone RP24-212F15 from chromosome 10, complete sequence Length = 181828 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 ttccagtttttgttcttgga 534 |||||||||||||||||||| Sbjct: 176990 ttccagtttttgttcttgga 176971
>gb|AC098716.2| Mus musculus BAC clone RP23-2F19 from 9, complete sequence Length = 214654 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gacttccaagaaaaagaaga 149 |||||||||||||||||||| Sbjct: 142919 gacttccaagaaaaagaaga 142900
>gb|AY394701.1| Adineta ricciae 82kD heat-shock protein gene (hsp82), partial sequence Length = 927 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 caagaaaaagaagaaaatca 155 |||||||||||||||||||| Sbjct: 801 caagaaaaagaagaaaatca 820
>gb|AC112943.12| Mus musculus chromosome 16, clone RP23-424C7, complete sequence Length = 219990 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gaacagaccaagcccaggag 188 |||||||||||||||||||| Sbjct: 212370 gaacagaccaagcccaggag 212389
>emb|AL731569.18| Human DNA sequence from clone RP11-77P6 on chromosome 10 Contains the 5' end of the gene for friend of EBNA2 (FOE) (KIAA0261) and two CpG islands, complete sequence Length = 133348 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 caagaaaaagaagaaaatca 155 |||||||||||||||||||| Sbjct: 96985 caagaaaaagaagaaaatca 96966
>emb|Z68223.1|HSE110C7 Human DNA sequence from clone LL22NC01-110C7 on chromosome 22, complete sequence Length = 38924 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ttgttcattctccaatgcca 450 |||||||||||||||||||| Sbjct: 38261 ttgttcattctccaatgcca 38280
>emb|AL442128.7| Human DNA sequence from clone RP11-365P13 on chromosome 13 Contains the 5' end of a novel gene (FLJ20093), an ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase) (ADPRT) pseudogene, a novel gene and a CpG island, complete sequence Length = 155026 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 tcttcatcctaaatctctcccact 495 |||||||| ||||||||||||||| Sbjct: 123766 tcttcatcataaatctctcccact 123743
>emb|AL139124.12| Human DNA sequence from clone RP11-76P2 on chromosome 10 Contains two novel genes and the 3' end of the PLCE1 gene for phospholipase C, epsilon 1 (PLCE, KIAA1516), complete sequence Length = 93276 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatc 154 |||||||||||||||||||| Sbjct: 16065 ccaagaaaaagaagaaaatc 16084
>emb|AL139405.11| Human DNA sequence from clone RP11-393E10 on chromosome 10 Contains the 5' end of a variant of the gene for a novel protein (FLJ10210) and the 3' end of the gene for a novel protein (MGC11034), complete sequence Length = 179829 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 128 aagacttccaagaaaaagaagaaaatca 155 |||| ||||||| ||||||||||||||| Sbjct: 85601 aagaattccaagtaaaagaagaaaatca 85574
>emb|AL132794.25|HSJ343I24 Human DNA sequence from clone RP3-343I24 on chromosome 6q13-14.1, complete sequence Length = 114728 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 aaaaagaagaaaatcatttc 159 |||||||||||||||||||| Sbjct: 32526 aaaaagaagaaaatcatttc 32507
>emb|AL133319.24| Human DNA sequence from clone RP11-394G3 on chromosome 6 Contains the 5' end of the PDE7B gene for phosphodiesterase 7B and a novel gene, complete sequence Length = 150072 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 agaaaagacttccaagaaaa 143 |||||||||||||||||||| Sbjct: 26942 agaaaagacttccaagaaaa 26923
>gb|AY304516.1| Homo sapiens lipid phosphate phosphatase-related protein type 2 mRNA, complete cds Length = 2680 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttccaagaaaaagaagaaaa 152 |||||||||||||||||||| Sbjct: 2474 ttccaagaaaaagaagaaaa 2455
>emb|X56600.1|RNSOD2 Rat SOD-2 gene for manganese-containing superoxide dismutase Length = 9811 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aagaaaaagaagaaaatcat 156 |||||||||||||||||||| Sbjct: 5026 aagaaaaagaagaaaatcat 5007
>emb|CR936652.1| Homo sapiens mRNA; cDNA DKFZp761E1121 (from clone DKFZp761E1121) Length = 3145 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttccaagaaaaagaagaaaa 152 |||||||||||||||||||| Sbjct: 2925 ttccaagaaaaagaagaaaa 2906
>gb|BC086376.1| Rattus norvegicus COBW domain containing 1, mRNA (cDNA clone MGC:105334 IMAGE:7135348), complete cds Length = 1405 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatc 154 |||||||||||||||||||| Sbjct: 95 ccaagaaaaagaagaaaatc 114
>emb|AL935054.11| Mouse DNA sequence from clone RP23-280A12 on chromosome 11 Contains the 5' end of the gene for a novel protein (C330012F17Rik, C130096N06Rik), a ribosomal protein L37a (Rpl37a) pseudogene, a pseudogene similar to part of a novel protein (D130064H19Rik), a fibrillarin (Fbl) pseudogene, the 5' end of the gene for a novel protein (4931428D14Rik) (2300003H10) and three CpG islands, complete sequence Length = 199018 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 gacttccaagaaaaagaaga 149 |||||||||||||||||||| Sbjct: 173677 gacttccaagaaaaagaaga 173696
>emb|BX469896.14| Zebrafish DNA sequence from clone DKEY-52L6 in linkage group 12, complete sequence Length = 157056 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 agaaaaagaagaaaatcatttcag 161 ||||||||||||||| |||||||| Sbjct: 91314 agaaaaagaagaaaagcatttcag 91291
>gb|AC091051.6| Homo sapiens chromosome 11, clone RP11-423H12, complete sequence Length = 177363 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aaagaagaaaatcatttcag 161 |||||||||||||||||||| Sbjct: 144985 aaagaagaaaatcatttcag 145004
>emb|AL353953.1|HSM802645 Homo sapiens mRNA; cDNA DKFZp761J1410 (from clone DKFZp761J1410) Length = 1383 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttccaagaaaaagaagaaaa 152 |||||||||||||||||||| Sbjct: 1158 ttccaagaaaaagaagaaaa 1139
>gb|AC104169.2| Homo sapiens chromosome 1 clone RP4-604P14, complete sequence Length = 142581 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 aaaagaagaaaatcatttcaggtt 164 ||||||||||||||||||| |||| Sbjct: 19056 aaaagaagaaaatcatttctggtt 19079
>gb|AC114482.2| Homo sapiens chromosome 1 clone RP11-484D4, complete sequence Length = 161874 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 aaaagaagaaaatcatttcaggtt 164 ||||||||||||||||||| |||| Sbjct: 132285 aaaagaagaaaatcatttctggtt 132308
>dbj|AK094869.1| Homo sapiens cDNA FLJ37550 fis, clone BRCAN2028036 Length = 2552 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttccaagaaaaagaagaaaa 152 |||||||||||||||||||| Sbjct: 2348 ttccaagaaaaagaagaaaa 2329
>dbj|AK023117.1| Homo sapiens cDNA FLJ13055 fis, clone NT2RP3001538, weakly similar to HYPOTHETICAL 39.0 KD PROTEIN T28D9.3 IN CHROMOSOME II Length = 2686 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttccaagaaaaagaagaaaa 152 |||||||||||||||||||| Sbjct: 2480 ttccaagaaaaagaagaaaa 2461
>gb|AC024575.6| Homo sapiens chromosome 19 clone CTD-2342J14, complete sequence Length = 119638 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttccaagaaaaagaagaaaa 152 |||||||||||||||||||| Sbjct: 40771 ttccaagaaaaagaagaaaa 40752
>gb|AC093917.3| Homo sapiens BAC clone RP11-800K23 from 4, complete sequence Length = 207691 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aaaaagaagaaaatcatttc 159 |||||||||||||||||||| Sbjct: 85846 aaaaagaagaaaatcatttc 85865
>gb|AC096762.3| Homo sapiens BAC clone RP11-621I20 from 4, complete sequence Length = 195937 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tccaagaaaaagaagaaaat 153 |||||||||||||||||||| Sbjct: 16697 tccaagaaaaagaagaaaat 16716
>gb|BC009378.1| Homo sapiens lipid phosphate phosphatase-related protein type 2, mRNA (cDNA clone MGC:15011 IMAGE:4125316), complete cds Length = 2591 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttccaagaaaaagaagaaaa 152 |||||||||||||||||||| Sbjct: 2362 ttccaagaaaaagaagaaaa 2343
>emb|BX072577.14| Zebrafish DNA sequence from clone CH211-151G22 in linkage group 21, complete sequence Length = 160341 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 atgctgaaacatcttttgtt 435 |||||||||||||||||||| Sbjct: 59457 atgctgaaacatcttttgtt 59438
>gb|AC154231.2| Mus musculus BAC clone RP24-339I11 from chromosome 13, complete sequence Length = 141075 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 aagacttccaagaaaaagaa 147 |||||||||||||||||||| Sbjct: 76316 aagacttccaagaaaaagaa 76297
>gb|AF170071.1|AF170071 Homo sapiens phospholipase C epsilon mRNA, partial cds Length = 5982 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatc 154 |||||||||||||||||||| Sbjct: 2327 ccaagaaaaagaagaaaatc 2346
>gb|AF130417.4|AF130417 Homo sapiens chromosome 21 clone PAC P704-97I18 map 21q21, complete sequence Length = 126433 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gtagaaaagacttccaagaa 141 |||||||||||||||||||| Sbjct: 76479 gtagaaaagacttccaagaa 76460
>gb|AF353305.1|AF353305 Rattus norvegicus dopamine responsive protein mRNA, complete cds Length = 1623 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatc 154 |||||||||||||||||||| Sbjct: 151 ccaagaaaaagaagaaaatc 170
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tccaagaaaaagaagaaaat 153 |||||||||||||||||||| Sbjct: 15205798 tccaagaaaaagaagaaaat 15205779
>gb|AC027281.10| Homo sapiens chromosome 16 clone RP11-424M24, complete sequence Length = 221210 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ttccaagaaaaagaagaaaa 152 |||||||||||||||||||| Sbjct: 59853 ttccaagaaaaagaagaaaa 59872
>emb|BX950300.1| Gallus gallus finished cDNA, clone ChEST900n11 Length = 1084 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 atcctaaatctctcccactt 496 |||||||||||||||||||| Sbjct: 898 atcctaaatctctcccactt 879
>gb|AC139766.15| Homo sapiens 3 BAC RP11-688P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187748 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aaaagaagaaaatcatttca 160 |||||||||||||||||||| Sbjct: 156278 aaaagaagaaaatcatttca 156297
>gb|AF190642.2|AF190642 Homo sapiens phosphoinositide-specific phospholipase C PLC-epsilon mRNA, complete cds Length = 7609 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatc 154 |||||||||||||||||||| Sbjct: 3486 ccaagaaaaagaagaaaatc 3505
>ref|NM_022737.1| Homo sapiens lipid phosphate phosphatase-related protein type 2 (LPPR2), mRNA Length = 2686 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttccaagaaaaagaagaaaa 152 |||||||||||||||||||| Sbjct: 2480 ttccaagaaaaagaagaaaa 2461
>gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section 3 of 9 of the complete sequence Length = 253132 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttccaagaaaaagaagaaaa 152 |||||||||||||||||||| Sbjct: 149465 ttccaagaaaaagaagaaaa 149446
>gb|AC078955.25| Homo sapiens 12 BAC RP11-543H12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159577 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 ttccagtttttgttcttgga 534 |||||||||||||||||||| Sbjct: 117454 ttccagtttttgttcttgga 117435
>gb|AC012150.16|AC012150 Homo sapiens 12 BAC RP11-946L16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 227305 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gaaaaagaagaaaatcattt 158 |||||||||||||||||||| Sbjct: 61203 gaaaaagaagaaaatcattt 61222
>gb|AF102001.1|AF102001 Influenza B virus (B/Norway/1/84) polymerase (PB1) gene, complete cds Length = 2259 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 agaagaaaatcatttcaggt 163 |||||||||||||||||||| Sbjct: 547 agaagaaaatcatttcaggt 528
>dbj|AK173729.1| Ciona intestinalis cDNA, clone:cicl006l16, full insert sequence Length = 651 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cttccaagaaaaagaagaaaatca 155 ||||||| |||||||||||||||| Sbjct: 122 cttccaaaaaaaagaagaaaatca 145
>dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0030H06 Length = 147890 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tccaagaaaaagaagaaaat 153 |||||||||||||||||||| Sbjct: 72547 tccaagaaaaagaagaaaat 72528
>emb|AL928946.17| Zebrafish DNA sequence from clone CH211-265D20 in linkage group 20, complete sequence Length = 157379 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 atgctgaaacatcttttgtt 435 |||||||||||||||||||| Sbjct: 81145 atgctgaaacatcttttgtt 81164
>dbj|BS000041.1| Pan troglodytes chromosome 22 clone:PTB-022L23, map 22, complete sequences Length = 190432 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gtagaaaagacttccaagaa 141 |||||||||||||||||||| Sbjct: 76269 gtagaaaagacttccaagaa 76250
>emb|AL807391.10| Mouse DNA sequence from clone RP23-432D24 on chromosome X, complete sequence Length = 111019 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 agaaaaagaagaaaatcatt 157 |||||||||||||||||||| Sbjct: 39484 agaaaaagaagaaaatcatt 39503
>emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 in linkage group 17, complete sequence Length = 187548 Score = 40.1 bits (20), Expect = 9.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 505 gttttgtcacttccagtttttgttcttg 532 ||||||||||||| |||||||||||||| Sbjct: 76383 gttttgtcacttc-agtttttgttcttg 76357
>dbj|D00004.1|FLBFLBL40 Influenza B virus (B/Lee/40) mRNA for PB1 polymerase protein, complete cds Length = 2381 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 gaagaaaatcatttcaggtt 164 |||||||||||||||||||| Sbjct: 579 gaagaaaatcatttcaggtt 560
>dbj|AK119648.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-G08, full insert sequence Length = 1444 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tccaagaaaaagaagaaaat 153 |||||||||||||||||||| Sbjct: 1361 tccaagaaaaagaagaaaat 1342
>dbj|AK025366.1| Homo sapiens cDNA: FLJ21713 fis, clone COL10239 Length = 2013 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatc 154 |||||||||||||||||||| Sbjct: 866 ccaagaaaaagaagaaaatc 885
>dbj|AB040949.2| Homo sapiens mRNA for KIAA1516 protein, partial cds Length = 7989 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaagaaaaagaagaaaatc 154 |||||||||||||||||||| Sbjct: 3885 ccaagaaaaagaagaaaatc 3904
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gctgagcaggatgcccttct 67 |||||||||||||||||||| Sbjct: 29161 gctgagcaggatgcccttct 29142
>dbj|AK114439.1| Ciona intestinalis cDNA, clone:cieg002c04, full insert sequence Length = 1893 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cttccaagaaaaagaagaaaatca 155 ||||||| |||||||||||||||| Sbjct: 534 cttccaaaaaaaagaagaaaatca 557
>gb|AC140338.3| Mus musculus BAC clone RP23-240M3 from 10, complete sequence Length = 232876 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 ttccagtttttgttcttgga 534 |||||||||||||||||||| Sbjct: 201815 ttccagtttttgttcttgga 201834
>emb|AL163217.2|HS21C017 Homo sapiens chromosome 21 segment HS21C017 Length = 340000 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gtagaaaagacttccaagaa 141 |||||||||||||||||||| Sbjct: 87346 gtagaaaagacttccaagaa 87327
>gb|M14880.1|FLBPB1 Influenza B/Lee/40, PB1 polymerase (seg 1) RNA, complete Length = 2368 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 gaagaaaatcatttcaggtt 164 |||||||||||||||||||| Sbjct: 566 gaagaaaatcatttcaggtt 547 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,918,407 Number of Sequences: 3902068 Number of extensions: 7918407 Number of successful extensions: 173250 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 172879 Number of HSP's gapped (non-prelim): 368 length of query: 656 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 633 effective length of database: 17,143,297,704 effective search space: 10851707446632 effective search space used: 10851707446632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)