ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18o04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla... 37 0.020
2CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 36 0.026
3CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl... 36 0.026
4CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl... 36 0.026
5CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 36 0.026
6CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 36 0.026
7CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 prot... 36 0.026
8CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 36 0.026
9CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 36 0.026
10CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 36 0.026
11CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 36 0.026
12CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 36 0.026
13CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl... 36 0.026
14CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 36 0.026
15CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl... 36 0.026
16CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 35 0.059
17CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 35 0.059
18CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 35 0.059
19CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 35 0.059
20CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 35 0.059
21CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 35 0.059
22CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 35 0.059
23CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 35 0.059
24CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 35 0.059
25CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 35 0.059
26CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 35 0.059
27CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 35 0.059
28CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 35 0.059
29CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 35 0.059
30CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 35 0.076
31CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 34 0.100
32CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 34 0.13
33CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 34 0.13
34CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 34 0.13
35CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 34 0.13
36CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 34 0.13
37CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII ty... 34 0.13
38CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 34 0.13
39CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 34 0.13
40CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 34 0.13
41CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 33 0.17
42CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 33 0.17
43CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 33 0.22
44CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 33 0.22
45CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 33 0.29
46CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 32 0.38
47CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 membe... 32 0.50
48CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 32 0.50
49CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 32 0.50
50CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 32 0.50
51CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 32 0.50
52CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 32 0.50
53CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo... 32 0.50
54CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 30 1.4
55CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 30 1.9
56CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 29 4.2
57CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 28 7.2

>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 36.6 bits (83), Expect = 0.020
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+AT  CP
Sbjct: 238 ADPVNNNAWAYATKLCP 254



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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 249 ADPVNNNAWAFATNFVP 265



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>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor|
           (LHCII type I CAB-3B) (LHCP) (Fragments)
          Length = 267

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 249 ADPVNNNAWAFATNFVP 265



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>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 249 ADPVNNNAWAFATNFVP 265



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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 249 ADPVNNNAWAFATNFVP 265



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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 249 ADPVNNNAWAFATNFVP 265



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>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein|
           (Chlorophyll a-b binding of LHCII type I protein) (CAB)
           (LHCP) (Fragment)
          Length = 124

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 106 ADPVNNNAWAFATNFVP 122



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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 246 ADPVNNNAWAFATNFVP 262



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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 246 ADPVNNNAWAFATNFVP 262



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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 248 ADPVNNNAWAFATNFVP 264



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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 248 ADPVNNNAWAFATNFVP 264



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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 248 ADPVNNNAWAFATNFVP 264



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>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 247 ADPVNNNAWAFATNFVP 263



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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 247 ADPVNNNAWAFATNFVP 263



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>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWAFATN  P
Sbjct: 247 ADPVNNNAWAFATNFVP 263



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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 247 ADPVNNNAWAYATNFVP 263



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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 247 ADPVNNNAWAYATNFVP 263



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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 247 ADPVNNNAWAYATNFVP 263



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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 247 ADPVNNNAWAYATNFVP 263



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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 237 ADPVNNNAWAYATNFVP 253



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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 260 ADPVNNNAWAYATNFVP 276



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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 260 ADPVNNNAWAYATNFVP 276



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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 188 ADPVNNNAWAYATNFVP 204



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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 249 ADPVNNNAWAYATNFVP 265



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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 249 ADPVNNNAWAYATNFVP 265



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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 249 ADPVNNNAWAYATNFVP 265



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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 256 ADPVNNNAWAYATNFVP 272



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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 243 ADPVNNNAWAYATNFVP 259



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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAWA+ATN  P
Sbjct: 244 ADPVNNNAWAYATNFVP 260



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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 34.7 bits (78), Expect = 0.076
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = -2

Query: 113 DPINNNAWAFATNSCPRQ 60
           DP+NNNAW++ATN  PR+
Sbjct: 250 DPVNNNAWSYATNFVPRK 267



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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 34.3 bits (77), Expect = 0.100
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCPRQ 60
           ADP+ NNAWAFATN  P Q
Sbjct: 247 ADPVANNAWAFATNFVPGQ 265



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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAW++ATN  P
Sbjct: 251 ADPVNNNAWSYATNFVP 267



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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAW FATN  P
Sbjct: 249 ADPVNNNAWNFATNFVP 265



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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAW++ATN  P
Sbjct: 249 ADPVNNNAWSYATNFVP 265



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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAW++ATN  P
Sbjct: 249 ADPVNNNAWSYATNFVP 265



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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAW++ATN  P
Sbjct: 249 ADPVNNNAWSYATNFVP 265



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>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)|
           (LHCP) (Fragment)
          Length = 116

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAW++ATN  P
Sbjct: 98  ADPVNNNAWSYATNFVP 114



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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAW++ATN  P
Sbjct: 210 ADPVNNNAWSYATNFVP 226



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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAW++ATN  P
Sbjct: 248 ADPVNNNAWSYATNFVP 264



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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAW++ATN  P
Sbjct: 248 ADPVNNNAWSYATNFVP 264



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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -2

Query: 113 DPINNNAWAFATNSCP 66
           DP+NNNAWA+ATN  P
Sbjct: 247 DPVNNNAWAYATNFVP 262



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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           A+P+NNNAWA+ATN  P
Sbjct: 227 AEPVNNNAWAYATNFVP 243



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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+ NNAWAFATN  P
Sbjct: 247 ADPVANNAWAFATNFVP 263



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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+ NNAWAFATN  P
Sbjct: 246 ADPVANNAWAFATNFVP 262



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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 32.7 bits (73), Expect = 0.29
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           +DP+NNNAW++ATN  P
Sbjct: 250 SDPVNNNAWSYATNFVP 266



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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 32.3 bits (72), Expect = 0.38
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           A P+NNNAWA+ATN  P
Sbjct: 245 AGPVNNNAWAYATNFVP 261



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>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2|
           (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP)
           (Fragment)
          Length = 150

 Score = 32.0 bits (71), Expect = 0.50
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+ NNAWA+ATN  P
Sbjct: 132 ADPVANNAWAYATNFVP 148



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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.50
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+ NNAWA+ATN  P
Sbjct: 247 ADPVANNAWAYATNFVP 263



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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.50
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+ NNAWA+ATN  P
Sbjct: 247 ADPVANNAWAYATNFVP 263



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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 32.0 bits (71), Expect = 0.50
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+ NNAWA+ATN  P
Sbjct: 245 ADPVANNAWAYATNFVP 261



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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 32.0 bits (71), Expect = 0.50
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+ NNAWA+ATN  P
Sbjct: 219 ADPVANNAWAYATNFVP 235



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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 32.0 bits (71), Expect = 0.50
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+NNNAW  ATN  P
Sbjct: 248 ADPVNNNAWLIATNFVP 264



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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 32.0 bits (71), Expect = 0.50
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+ NNAWA+ATN  P
Sbjct: 248 ADPVANNAWAYATNFVP 264



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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 113 DPINNNAWAFATNSCP 66
           DP+ NNAWA+ATN  P
Sbjct: 248 DPVANNAWAYATNFVP 263



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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP  NNAWA+ATN  P
Sbjct: 247 ADPAVNNAWAYATNFTP 263



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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -2

Query: 116 ADPINNNAWAFATNSCP 66
           ADP+ NNAWA+A  S P
Sbjct: 250 ADPVANNAWAYAPTSPP 266



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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 113 DPINNNAWAFATNSCP 66
           DP+ NNAW FAT   P
Sbjct: 251 DPVANNAWVFATKFAP 266


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,465,861
Number of Sequences: 219361
Number of extensions: 183079
Number of successful extensions: 651
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 80,573,946
effective HSP length: 14
effective length of database: 77,502,892
effective search space used: 1860069408
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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