ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19c20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK099999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 426 e-116
2gb|AY108425.1| Zea mays PCO146490 mRNA sequence 375 e-100
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 319 6e-84
4gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare str... 319 6e-84
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 319 6e-84
6gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome... 319 6e-84
7gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-2... 50 0.009
8emb|Z95331.2|HS941F9 Human DNA sequence from clone CTA-941F9 on ... 44 0.53
9gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, com... 44 0.53
10gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete ... 44 0.53
11dbj|AB051572.1| Aphis gossypii mRNA for GrpE, complete cds 44 0.53
12dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 44 0.53
13emb|AL646090.5| Human DNA sequence from clone RP11-542F9 on chro... 42 2.1
14emb|AL593844.4| Human DNA sequence from clone RP11-406O16 on chr... 42 2.1
15emb|AL356500.14| Human DNA sequence from clone RP11-307G7 on chr... 42 2.1
16gb|AC128692.11| Homo sapiens 3 BAC RP11-743G11 (Roswell Park Can... 42 2.1
17emb|AL731688.14| Mouse DNA sequence from clone RP23-291K6 on chr... 42 2.1
18emb|AL732401.6| Mouse DNA sequence from clone RP23-405K20 on chr... 42 2.1
19gb|AC019306.10| Homo sapiens chromosome 18, clone RP11-326M20, c... 42 2.1
20gb|AC025159.28| Homo sapiens 12 BAC RP11-1082K22 (Roswell Park C... 42 2.1
21gb|AC007768.5| Homo sapiens chromosome 18, clone RP11-540M4, com... 42 2.1
22gb|AC024942.18|AC024942 Homo sapiens 12 BAC RP11-1115M13 (Roswel... 42 2.1
23gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 ... 42 2.1
24ref|NM_001035934.1| Arabidopsis thaliana protein transporter AT1... 40 8.3
25ref|NM_179292.1| Arabidopsis thaliana protein transporter AT1G09... 40 8.3
26ref|NM_100797.4| Arabidopsis thaliana protein transporter AT1G09... 40 8.3
27gb|AC150387.2| Branchiostoma floridae clone CH302-103N24, comple... 40 8.3
28gb|DQ011272.1| Oikopleura dioica eyes absent (eya) gene, complet... 40 8.3
29gb|AC116321.4| Mus musculus BAC clone RP23-270L15 from chromosom... 40 8.3
30gb|AC005029.1| Homo sapiens BAC clone GS1-588G18 from 7, complet... 40 8.3
31emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chrom... 40 8.3
32gb|AY050888.1| Arabidopsis thaliana At1g09270 mRNA sequence 40 8.3
33emb|Y14616.1|ATIMPA4 Arabidopsis thaliana partial mRNA for impor... 40 8.3
34gb|AY117313.1| Arabidopsis thaliana putative importin alpha prot... 40 8.3
35gb|AY090944.1| Arabidopsis thaliana putative importin alpha prot... 40 8.3
36emb|AJ291298.1|PSA291298 Pisum sativum peam4 gene for MADS-box t... 40 8.3
37emb|BX005379.9| Zebrafish DNA sequence from clone DKEY-184P9 in ... 40 8.3
38emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in ... 40 8.3
39gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, comp... 40 8.3
40emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 i... 40 8.3
41gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosom... 40 8.3
42gb|AF367284.1|AF367284 Arabidopsis thaliana At1g09270/T12M4_2 mR... 40 8.3
43gb|AC013602.4|AC013602 Homo sapiens, clone RP11-10C6, complete s... 40 8.3
44gb|AC009750.7|AC009750 Drosophila melanogaster, chromosome 2L, r... 40 8.3
45emb|BX815301.1|CNS0AALB Arabidopsis thaliana Full-length cDNA Co... 40 8.3
46gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O... 40 8.3
47gb|AC069550.4|AC069550 Sequence of chromosome 2 clone RP11-471B2... 40 8.3
48gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, com... 40 8.3
49gb|AC103681.4| Homo sapiens chromosome 11, clone CTD-2560E9, com... 40 8.3
50gb|AC105029.7| Homo sapiens chromosome 8, clone CTD-2210A23, com... 40 8.3
51gb|AF254136.3| Homo sapiens chromosome 8 clone RP11-386F22, RP11... 40 8.3
52gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q... 40 8.3
53gb|AC011088.8|AC011088 Homo sapiens chromosome 11, clone RP11-29... 40 8.3
54dbj|BS000245.1| Pan troglodytes chromosome 22 clone:PTB-059I14, ... 40 8.3
55dbj|BS000244.1| Pan troglodytes chromosome 22 clone:PTB-070F15, ... 40 8.3
56gb|AE003580.3| Drosophila melanogaster chromosome 2L, section 11... 40 8.3
57emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chr... 40 8.3
58gb|AC154126.2| Mus musculus BAC clone RP23-471O11 from chromosom... 40 8.3
59emb|AL672184.13| Mouse DNA sequence from clone RP23-421G11 on ch... 40 8.3 
>dbj|AK099999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134K18, full
            insert sequence
          Length = 3073

 Score =  426 bits (215), Expect = e-116
 Identities = 332/371 (89%)
 Strand = Plus / Minus

                                                                        
Query: 240  tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 299
            |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 2691 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 2632

                                                                        
Query: 300  tgccacaaggttcgcaatctttgacttgacagcacgcagggtcccatcggtatctctaac 359
            |||||| ||||| || |||||||||||||| ||||||| ||||||||| |||||||||||
Sbjct: 2631 tgccacgaggtttgcgatctttgacttgactgcacgcaaggtcccatcagtatctctaac 2572

                                                                        
Query: 360  attgtccatgcagtttagagcaaccttcaggagatctggcacacaagcttgaacatgggg 419
            ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 2571 attgtccatacaatttagagcaaccttcaagagatctggcacacaagcttgaacatgcgg 2512

                                                                        
Query: 420  tgataaattcctgaatacatcgactgatacattcggagactgtggatccaaatgaagaaa 479
            ||| || || ||||| ||||| ||||  ||||| |||| ||| |||||||||||||||||
Sbjct: 2511 tgacaagtttctgaacacatcaactgtcacatttggagcctgaggatccaaatgaagaaa 2452

                                                                        
Query: 480  tggaagtttgatggtttccctcagagcgtcaacagtttgtccagcacgagctagcctata 539
            ||| ||||||||||||||||||| ||| || | ||| |||||||| ||||| ||||||||
Sbjct: 2451 tgggagtttgatggtttccctcaaagcatctaaagtctgtccagctcgagcaagcctata 2392

                                                                        
Query: 540  aatgtgaagaatagcttcaagctgtctcagtacaatttgctgttcagaaatgagatcctt 599
             || || ||||||||||||||||||||||||||| |||| || ||||| ||||| |||||
Sbjct: 2391 gatatggagaatagcttcaagctgtctcagtacagtttgttgctcagatatgaggtcctt 2332

                       
Query: 600  gtcttgaacac 610
            |||||||||||
Sbjct: 2331 gtcttgaacac 2321
to top
>gb|AY108425.1| Zea mays PCO146490 mRNA sequence
          Length = 775

 Score =  375 bits (189), Expect = e-100
 Identities = 324/369 (87%)
 Strand = Plus / Minus

                                                                       
Query: 239 ttcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgc 298
           ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 609 ttcatatgcactgtgccaccttctgatacaaatcctgtggccaattccggctcatgttgc 550

                                                                       
Query: 299 ttgccacaaggttcgcaatctttgacttgacagcacgcagggtcccatcggtatctctaa 358
           |||| |||||||| || |||||||| |||||||| |||| ||||||||| ||||||||||
Sbjct: 549 ttgctacaaggtttgcgatctttgatttgacagcgcgcaaggtcccatcagtatctctaa 490

                                                                       
Query: 359 cattgtccatgcagtttagagcaaccttcaggagatctggcacacaagcttgaacatggg 418
           ||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 489 cattgtcaatgcaatttagagcaaccttcaggagatctggcacgcaagcttgaacatggg 430

                                                                       
Query: 419 gtgataaattcctgaatacatcgactgatacattcggagactgtggatccaaatgaagaa 478
           |||| || |||||||| |  || || |  ||||| |||| ||  || ||||||||||| |
Sbjct: 429 gtgacaagttcctgaaaatgtcaacagtcacatttggagccttggggtccaaatgaagga 370

                                                                       
Query: 479 atggaagtttgatggtttccctcagagcgtcaacagtttgtccagcacgagctagcctat 538
           | || ||  ||||||||||||||| ||| || |||||||| ||||| |||||||||||||
Sbjct: 369 agggtagcctgatggtttccctcaaagcatctacagtttgcccagctcgagctagcctat 310

                                                                       
Query: 539 aaatgtgaagaatagcttcaagctgtctcagtacaatttgctgttcagaaatgagatcct 598
           |||| || ||||||||||||||||||||||| ||| |||| || ||||||||||| ||||
Sbjct: 309 aaatatggagaatagcttcaagctgtctcagcacagtttgttgctcagaaatgaggtcct 250

                    
Query: 599 tgtcttgaa 607
           | |||||||
Sbjct: 249 tctcttgaa 241
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  319 bits (161), Expect = 6e-84
 Identities = 260/293 (88%)
 Strand = Plus / Plus

                                                                            
Query: 318      ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 377
                |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || |||||
Sbjct: 13075933 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 13075992

                                                                            
Query: 378      agcaaccttcaggagatctggcacacaagcttgaacatggggtgataaattcctgaatac 437
                ||||||||||| ||||||||||||||||||||||||||| ||||| || || ||||| ||
Sbjct: 13075993 agcaaccttcaagagatctggcacacaagcttgaacatgcggtgacaagtttctgaacac 13076052

                                                                            
Query: 438      atcgactgatacattcggagactgtggatccaaatgaagaaatggaagtttgatggtttc 497
                ||| ||||  ||||| |||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 13076053 atcaactgtcacatttggagcctgaggatccaaatgaagaaatgggagtttgatggtttc 13076112

                                                                            
Query: 498      cctcagagcgtcaacagtttgtccagcacgagctagcctataaatgtgaagaatagcttc 557
                ||||| ||| || | ||| |||||||| ||||| |||||||| || || |||||||||||
Sbjct: 13076113 cctcaaagcatctaaagtctgtccagctcgagcaagcctatagatatggagaatagcttc 13076172

                                                                     
Query: 558      aagctgtctcagtacaatttgctgttcagaaatgagatccttgtcttgaacac 610
                |||||||||||||||| |||| || ||||| ||||| ||||||||||||||||
Sbjct: 13076173 aagctgtctcagtacagtttgttgctcagatatgaggtccttgtcttgaacac 13076225



 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                            
Query: 240      tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 299
                |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 13075155 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 13075214

                            
Query: 300      tgccacaaggtt 311
                |||||| |||||
Sbjct: 13075215 tgccacgaggtt 13075226
to top
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07,
              from chromosome 3, complete sequence
          Length = 151173

 Score =  319 bits (161), Expect = 6e-84
 Identities = 260/293 (88%)
 Strand = Plus / Minus

                                                                          
Query: 318    ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 377
              |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || |||||
Sbjct: 150683 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 150624

                                                                          
Query: 378    agcaaccttcaggagatctggcacacaagcttgaacatggggtgataaattcctgaatac 437
              ||||||||||| ||||||||||||||||||||||||||| ||||| || || ||||| ||
Sbjct: 150623 agcaaccttcaagagatctggcacacaagcttgaacatgcggtgacaagtttctgaacac 150564

                                                                          
Query: 438    atcgactgatacattcggagactgtggatccaaatgaagaaatggaagtttgatggtttc 497
              ||| ||||  ||||| |||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 150563 atcaactgtcacatttggagcctgaggatccaaatgaagaaatgggagtttgatggtttc 150504

                                                                          
Query: 498    cctcagagcgtcaacagtttgtccagcacgagctagcctataaatgtgaagaatagcttc 557
              ||||| ||| || | ||| |||||||| ||||| |||||||| || || |||||||||||
Sbjct: 150503 cctcaaagcatctaaagtctgtccagctcgagcaagcctatagatatggagaatagcttc 150444

                                                                   
Query: 558    aagctgtctcagtacaatttgctgttcagaaatgagatccttgtcttgaacac 610
              |||||||||||||||| |||| || ||||| ||||| ||||||||||||||||
Sbjct: 150443 aagctgtctcagtacagtttgttgctcagatatgaggtccttgtcttgaacac 150391
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  319 bits (161), Expect = 6e-84
 Identities = 260/293 (88%)
 Strand = Plus / Plus

                                                                            
Query: 318      ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 377
                |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || |||||
Sbjct: 13072708 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 13072767

                                                                            
Query: 378      agcaaccttcaggagatctggcacacaagcttgaacatggggtgataaattcctgaatac 437
                ||||||||||| ||||||||||||||||||||||||||| ||||| || || ||||| ||
Sbjct: 13072768 agcaaccttcaagagatctggcacacaagcttgaacatgcggtgacaagtttctgaacac 13072827

                                                                            
Query: 438      atcgactgatacattcggagactgtggatccaaatgaagaaatggaagtttgatggtttc 497
                ||| ||||  ||||| |||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 13072828 atcaactgtcacatttggagcctgaggatccaaatgaagaaatgggagtttgatggtttc 13072887

                                                                            
Query: 498      cctcagagcgtcaacagtttgtccagcacgagctagcctataaatgtgaagaatagcttc 557
                ||||| ||| || | ||| |||||||| ||||| |||||||| || || |||||||||||
Sbjct: 13072888 cctcaaagcatctaaagtctgtccagctcgagcaagcctatagatatggagaatagcttc 13072947

                                                                     
Query: 558      aagctgtctcagtacaatttgctgttcagaaatgagatccttgtcttgaacac 610
                |||||||||||||||| |||| || ||||| ||||| ||||||||||||||||
Sbjct: 13072948 aagctgtctcagtacagtttgttgctcagatatgaggtccttgtcttgaacac 13073000



 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                            
Query: 240      tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 299
                |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 13071930 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 13071989

                            
Query: 300      tgccacaaggtt 311
                |||||| |||||
Sbjct: 13071990 tgccacgaggtt 13072001
to top
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11,
              complete sequence
          Length = 176637

 Score =  319 bits (161), Expect = 6e-84
 Identities = 260/293 (88%)
 Strand = Plus / Plus

                                                                          
Query: 318    ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 377
              |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || |||||
Sbjct: 153631 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 153690

                                                                          
Query: 378    agcaaccttcaggagatctggcacacaagcttgaacatggggtgataaattcctgaatac 437
              ||||||||||| ||||||||||||||||||||||||||| ||||| || || ||||| ||
Sbjct: 153691 agcaaccttcaagagatctggcacacaagcttgaacatgcggtgacaagtttctgaacac 153750

                                                                          
Query: 438    atcgactgatacattcggagactgtggatccaaatgaagaaatggaagtttgatggtttc 497
              ||| ||||  ||||| |||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 153751 atcaactgtcacatttggagcctgaggatccaaatgaagaaatgggagtttgatggtttc 153810

                                                                          
Query: 498    cctcagagcgtcaacagtttgtccagcacgagctagcctataaatgtgaagaatagcttc 557
              ||||| ||| || | ||| |||||||| ||||| |||||||| || || |||||||||||
Sbjct: 153811 cctcaaagcatctaaagtctgtccagctcgagcaagcctatagatatggagaatagcttc 153870

                                                                   
Query: 558    aagctgtctcagtacaatttgctgttcagaaatgagatccttgtcttgaacac 610
              |||||||||||||||| |||| || ||||| ||||| ||||||||||||||||
Sbjct: 153871 aagctgtctcagtacagtttgttgctcagatatgaggtccttgtcttgaacac 153923



 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                          
Query: 240    tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 299
              |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 152853 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 152912

                          
Query: 300    tgccacaaggtt 311
              |||||| |||||
Sbjct: 152913 tgccacgaggtt 152924
to top
>gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-22d10, complete
             sequence
          Length = 105618

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 376   agagcaaccttcaggagatctggcacacaagcttgaacatggggtgataaatt 428
             ||||||||||||| ||| ||||| | ||||||||| ||||| || ||||||||
Sbjct: 48601 agagcaaccttcaagaggtctggtatacaagcttggacatgaggagataaatt 48653
to top
>emb|Z95331.2|HS941F9 Human DNA sequence from clone CTA-941F9 on chromosome 22q13, complete
              sequence
          Length = 127587

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 147    ccttcaactacctgttcaaatg 168
              ||||||||||||||||||||||
Sbjct: 116078 ccttcaactacctgttcaaatg 116057
to top
>gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, complete sequence
          Length = 158297

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 36    atgaaaagtggcagttttcttg 57
             ||||||||||||||||||||||
Sbjct: 92561 atgaaaagtggcagttttcttg 92540
to top
>gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete sequence
          Length = 172914

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 353    ctctaacattgtccatgcagtttaga 378
              |||||||||||| |||||||||||||
Sbjct: 139697 ctctaacattgtacatgcagtttaga 139672
to top
>dbj|AB051572.1| Aphis gossypii mRNA for GrpE, complete cds
          Length = 881

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 146 accttcaactacctgttcaaat 167
           ||||||||||||||||||||||
Sbjct: 666 accttcaactacctgttcaaat 645
to top
>dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1433G4, complete
              sequence
          Length = 175784

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 353    ctctaacattgtccatgcagtttaga 378
              |||||||||||| |||||||||||||
Sbjct: 133427 ctctaacattgtacatgcagtttaga 133452
to top
>emb|AL646090.5| Human DNA sequence from clone RP11-542F9 on chromosome 6 Contains a
             novel gene, complete sequence
          Length = 88711

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 87    aacaagacagacatggttcca 107
             |||||||||||||||||||||
Sbjct: 87086 aacaagacagacatggttcca 87106
to top
>emb|AL593844.4| Human DNA sequence from clone RP11-406O16 on chromosome 6 Contains
           the 3' part of a novel gene, complete sequence
          Length = 157929

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  aacaagacagacatggttcca 107
           |||||||||||||||||||||
Sbjct: 375 aacaagacagacatggttcca 395
to top
>emb|AL356500.14| Human DNA sequence from clone RP11-307G7 on chromosome 1, complete
             sequence
          Length = 41741

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 467   ccaaatgaagaaatggaagtttgat 491
             ||||||||||||||||||| |||||
Sbjct: 34755 ccaaatgaagaaatggaaggttgat 34731
to top
>gb|AC128692.11| Homo sapiens 3 BAC RP11-743G11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 83627

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 419   gtgataaattcctgaatacat 439
             |||||||||||||||||||||
Sbjct: 32634 gtgataaattcctgaatacat 32614
to top
>emb|AL731688.14| Mouse DNA sequence from clone RP23-291K6 on chromosome 11 Contains
           the 3' end of the Slit3 gene for slit homolog 3
           (Drosophila), complete sequence
          Length = 113164

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 198 gatagcccatttccctagcac 218
           |||||||||||||||||||||
Sbjct: 16  gatagcccatttccctagcac 36
to top
>emb|AL732401.6| Mouse DNA sequence from clone RP23-405K20 on chromosome 11 Contains
             part of the Slit3 gene for slit homolog 3 (Drosophila),
             complete sequence
          Length = 89624

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 198   gatagcccatttccctagcac 218
             |||||||||||||||||||||
Sbjct: 87640 gatagcccatttccctagcac 87660
to top
>gb|AC019306.10| Homo sapiens chromosome 18, clone RP11-326M20, complete sequence
          Length = 175840

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    aaacaagacagacatggttcc 106
             |||||||||||||||||||||
Sbjct: 10044 aaacaagacagacatggttcc 10064
to top
>gb|AC025159.28| Homo sapiens 12 BAC RP11-1082K22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 209961

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 198    gatagcccatttccctagcac 218
              |||||||||||||||||||||
Sbjct: 113002 gatagcccatttccctagcac 112982
to top
>gb|AC007768.5| Homo sapiens chromosome 18, clone RP11-540M4, complete sequence
          Length = 175579

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    aaacaagacagacatggttcc 106
             |||||||||||||||||||||
Sbjct: 97179 aaacaagacagacatggttcc 97199
to top
>gb|AC024942.18|AC024942 Homo sapiens 12 BAC RP11-1115M13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 146120

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 198   gatagcccatttccctagcac 218
             |||||||||||||||||||||
Sbjct: 94042 gatagcccatttccctagcac 94022
to top
>gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 sequence, complete
            sequence
          Length = 59261

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 155  tacctgttcaaatggtgttgg 175
            |||||||||||||||||||||
Sbjct: 6168 tacctgttcaaatggtgttgg 6188
to top
>ref|NM_001035934.1| Arabidopsis thaliana protein transporter AT1G09270 transcript
           variant AT1G09270.3 mRNA, complete cds
          Length = 2475

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 acctgttcaaatggtgttgg 175
           ||||||||||||||||||||
Sbjct: 828 acctgttcaaatggtgttgg 809
to top
>ref|NM_179292.1| Arabidopsis thaliana protein transporter AT1G09270 transcript
           variant AT1G09270.2 mRNA, complete cds
          Length = 2404

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 acctgttcaaatggtgttgg 175
           ||||||||||||||||||||
Sbjct: 838 acctgttcaaatggtgttgg 819
to top
>ref|NM_100797.4| Arabidopsis thaliana protein transporter AT1G09270 transcript
           variant AT1G09270.1 mRNA, complete cds
          Length = 2710

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 acctgttcaaatggtgttgg 175
           ||||||||||||||||||||
Sbjct: 838 acctgttcaaatggtgttgg 819
to top
>gb|AC150387.2| Branchiostoma floridae clone CH302-103N24, complete sequence
          Length = 193376

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     gctgctgcaacagttcttgg 20
             ||||||||||||||||||||
Sbjct: 10662 gctgctgcaacagttcttgg 10643
to top
>gb|DQ011272.1| Oikopleura dioica eyes absent (eya) gene, complete cds
          Length = 43001

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    gcagttttcttgaattttga 65
             ||||||||||||||||||||
Sbjct: 35618 gcagttttcttgaattttga 35599
to top
>gb|AC116321.4| Mus musculus BAC clone RP23-270L15 from chromosome 2, complete sequence
          Length = 183636

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 582   ttcagaaatgagatccttgt 601
             ||||||||||||||||||||
Sbjct: 89591 ttcagaaatgagatccttgt 89610
to top
>gb|AC005029.1| Homo sapiens BAC clone GS1-588G18 from 7, complete sequence
          Length = 184949

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 531   tagcctataaatgtgaagaa 550
             ||||||||||||||||||||
Sbjct: 19318 tagcctataaatgtgaagaa 19337
to top
>emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chromosome Xq22.2-23 Contains
              a thyroid autoantigen 70kDa (Ku antigen) (G22P1)
              pseudogene, complete sequence
          Length = 133402

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    tgttggggaatggggagctt 189
              ||||||||||||||||||||
Sbjct: 108770 tgttggggaatggggagctt 108789
to top
>gb|AY050888.1| Arabidopsis thaliana At1g09270 mRNA sequence
          Length = 2406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 acctgttcaaatggtgttgg 175
           ||||||||||||||||||||
Sbjct: 877 acctgttcaaatggtgttgg 858
to top
>emb|Y14616.1|ATIMPA4 Arabidopsis thaliana partial mRNA for importin alpha-like protein 4
          Length = 1778

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 acctgttcaaatggtgttgg 175
           ||||||||||||||||||||
Sbjct: 713 acctgttcaaatggtgttgg 694
to top
>gb|AY117313.1| Arabidopsis thaliana putative importin alpha protein (At1g09270)
           mRNA, complete cds
          Length = 1648

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 acctgttcaaatggtgttgg 175
           ||||||||||||||||||||
Sbjct: 740 acctgttcaaatggtgttgg 721
to top
>gb|AY090944.1| Arabidopsis thaliana putative importin alpha protein (At1g09270)
           mRNA, complete cds
          Length = 2001

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 acctgttcaaatggtgttgg 175
           ||||||||||||||||||||
Sbjct: 838 acctgttcaaatggtgttgg 819
to top
>emb|AJ291298.1|PSA291298 Pisum sativum peam4 gene for MADS-box transcription factor, exons 1-8
          Length = 3333

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 403  caagcttgaacatggggtga 422
            ||||||||||||||||||||
Sbjct: 3029 caagcttgaacatggggtga 3048
to top
>emb|BX005379.9| Zebrafish DNA sequence from clone DKEY-184P9 in linkage group 21,
              complete sequence
          Length = 185814

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 30     taaatcatgaaaagtggcagtttt 53
              |||||||| |||||||||||||||
Sbjct: 154062 taaatcataaaaagtggcagtttt 154085
to top
>emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in linkage group 11,
             complete sequence
          Length = 252675

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    cttgaattttgacacacaca 73
             ||||||||||||||||||||
Sbjct: 38706 cttgaattttgacacacaca 38725
to top
>gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, complete sequence
          Length = 151712

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     aacaagacagacatggttcc 106
              ||||||||||||||||||||
Sbjct: 138418 aacaagacagacatggttcc 138399
to top
>emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 in linkage group 17,
              complete sequence
          Length = 173690

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     ttagtaataaatcatgaaaa 42
              ||||||||||||||||||||
Sbjct: 121635 ttagtaataaatcatgaaaa 121616
to top
>gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosome 14, complete sequence
          Length = 154626

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    acaaatcctgtggccaattc 285
              ||||||||||||||||||||
Sbjct: 128798 acaaatcctgtggccaattc 128817
to top
>gb|AF367284.1|AF367284 Arabidopsis thaliana At1g09270/T12M4_2 mRNA, partial cds
          Length = 1126

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 acctgttcaaatggtgttgg 175
           ||||||||||||||||||||
Sbjct: 828 acctgttcaaatggtgttgg 809
to top
>gb|AC013602.4|AC013602 Homo sapiens, clone RP11-10C6, complete sequence
          Length = 152770

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     aacaagacagacatggttcc 106
              ||||||||||||||||||||
Sbjct: 111271 aacaagacagacatggttcc 111252
to top
>gb|AC009750.7|AC009750 Drosophila melanogaster, chromosome 2L, region 23F-24A, BAC clone
             BACR15P13, complete sequence
          Length = 187049

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 545   gaagaatagcttcaagctgt 564
             ||||||||||||||||||||
Sbjct: 78850 gaagaatagcttcaagctgt 78869
to top
>emb|BX815301.1|CNS0AALB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS50ZB07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1954

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 acctgttcaaatggtgttgg 175
           ||||||||||||||||||||
Sbjct: 798 acctgttcaaatggtgttgg 779
to top
>gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O12 genomic sequence, complete
             sequence
          Length = 39456

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    tggatttagtaataaatcatgaaa 41
             ||||||||||||| ||||||||||
Sbjct: 9978  tggatttagtaatgaatcatgaaa 10001
to top
>gb|AC069550.4|AC069550 Sequence of chromosome 2 clone RP11-471B2 containing Homo sapiens NRXNI
              gene, partial cds, complete sequence
          Length = 166054

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     aacaagacagacatggttcc 106
              ||||||||||||||||||||
Sbjct: 140103 aacaagacagacatggttcc 140122
to top
>gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, complete sequence
          Length = 200622

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    aacaagacagacatggttcc 106
             ||||||||||||||||||||
Sbjct: 96245 aacaagacagacatggttcc 96264
to top
>gb|AC103681.4| Homo sapiens chromosome 11, clone CTD-2560E9, complete sequence
          Length = 215485

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    aacaagacagacatggttcc 106
             ||||||||||||||||||||
Sbjct: 98729 aacaagacagacatggttcc 98710
to top
>gb|AC105029.7| Homo sapiens chromosome 8, clone CTD-2210A23, complete sequence
          Length = 123934

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   gctcatgttgcttgccacaa 307
             ||||||||||||||||||||
Sbjct: 27805 gctcatgttgcttgccacaa 27786
to top
>gb|AF254136.3| Homo sapiens chromosome 8 clone RP11-386F22, RP11-820H12 map q24.2,
              complete sequence
          Length = 184865

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     aacaagacagacatggttcc 106
              ||||||||||||||||||||
Sbjct: 159177 aacaagacagacatggttcc 159196
to top
>gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q24.2, complete
             sequence
          Length = 170376

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    aacaagacagacatggttcc 106
             ||||||||||||||||||||
Sbjct: 34385 aacaagacagacatggttcc 34404
to top
>gb|AC011088.8|AC011088 Homo sapiens chromosome 11, clone RP11-292E14, complete sequence
          Length = 164991

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 420  tgataaattcctgaatacat 439
            ||||||||||||||||||||
Sbjct: 8067 tgataaattcctgaatacat 8048
to top
>dbj|BS000245.1| Pan troglodytes chromosome 22 clone:PTB-059I14, map 22, complete
              sequences
          Length = 201304

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 420    tgataaattcctgaatacat 439
              ||||||||||||||||||||
Sbjct: 104988 tgataaattcctgaatacat 104969
to top
>dbj|BS000244.1| Pan troglodytes chromosome 22 clone:PTB-070F15, map 22, complete
              sequences
          Length = 155086

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 420    tgataaattcctgaatacat 439
              ||||||||||||||||||||
Sbjct: 151737 tgataaattcctgaatacat 151718
to top
>gb|AE003580.3| Drosophila melanogaster chromosome 2L, section 11 of 83 of the complete
              sequence
          Length = 286920

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 545    gaagaatagcttcaagctgt 564
              ||||||||||||||||||||
Sbjct: 191512 gaagaatagcttcaagctgt 191531
to top
>emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chromosome 2, complete
             sequence
          Length = 212028

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 582   ttcagaaatgagatccttgt 601
             ||||||||||||||||||||
Sbjct: 61531 ttcagaaatgagatccttgt 61550
to top
>gb|AC154126.2| Mus musculus BAC clone RP23-471O11 from chromosome 7, complete sequence
          Length = 198860

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    tttccctagcacttcaggcc 226
              ||||||||||||||||||||
Sbjct: 107023 tttccctagcacttcaggcc 107004
to top
>emb|AL672184.13| Mouse DNA sequence from clone RP23-421G11 on chromosome X, complete
              sequence
          Length = 211206

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 471    atgaagaaatggaagtttga 490
              ||||||||||||||||||||
Sbjct: 108098 atgaagaaatggaagtttga 108117


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,167,291
Number of Sequences: 3902068
Number of extensions: 6167291
Number of successful extensions: 123512
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123359
Number of HSP's gapped (non-prelim): 153
length of query: 610
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 587
effective length of database: 17,143,297,704
effective search space: 10063115752248
effective search space used: 10063115752248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top