Clone Name | rbasd18n20 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | I10R2_MOUSE (Q61190) Interleukin-10 receptor beta chain precurso... | 32 | 1.6 | 2 | YEBS_ECOLI (P0AD03) Inner membrane protein yebS | 31 | 3.5 | 3 | YEBS_ECO57 (P0AD04) Inner membrane protein yebS | 31 | 3.5 |
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>I10R2_MOUSE (Q61190) Interleukin-10 receptor beta chain precursor (IL-10R-B)| (IL-10R2) (Cytokine receptor family 2 member 4) (Cytokine receptor class-II member 4) (CRF2-4) (CDw210b antigen) Length = 349 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Frame = -2 Query: 136 FLKLTIPIHWLVIPQTKHHLNSGPG-----RGFLSHPHANSLHKNFLPPP 2 FL + WL+ +TKH SG + FL HPH ++ PPP Sbjct: 237 FLLGCFVVLWLIYKKTKHTFRSGTSLPQHLKEFLGHPHHSTFLLFSFPPP 286
>YEBS_ECOLI (P0AD03) Inner membrane protein yebS| Length = 427 Score = 30.8 bits (68), Expect = 3.5 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 Query: 201 LQKLAKVAFGSRXRIPGGWG*PFFVVWLQGIR 296 L +LA +AF +P WG P +WL GIR Sbjct: 66 LTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIR 97
>YEBS_ECO57 (P0AD04) Inner membrane protein yebS| Length = 427 Score = 30.8 bits (68), Expect = 3.5 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 Query: 201 LQKLAKVAFGSRXRIPGGWG*PFFVVWLQGIR 296 L +LA +AF +P WG P +WL GIR Sbjct: 66 LTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIR 97 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 108,237,339 Number of Sequences: 219361 Number of extensions: 2516663 Number of successful extensions: 4768 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4572 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4765 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)