Clone Name | rbasd18n19 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YEBS_ECOLI (P0AD03) Inner membrane protein yebS | 32 | 2.4 | 2 | YEBS_ECO57 (P0AD04) Inner membrane protein yebS | 32 | 2.4 | 3 | IRS2B_XENLA (Q5RJW5) Insulin receptor substrate 2-B (IRS-2-B) | 30 | 9.2 | 4 | GDA0_WHEAT (P02863) Alpha/beta-gliadin precursor (Prolamin) | 30 | 9.2 | 5 | IRS2A_XENLA (Q9DF49) Insulin receptor substrate 2-A (IRS-2-A) (I... | 30 | 9.2 |
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>YEBS_ECOLI (P0AD03) Inner membrane protein yebS| Length = 427 Score = 31.6 bits (70), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 Query: 225 LQKLAKVAFGSRVRIPGGWG*PFFVVWLQGIR 320 L +LA +AF + +P WG P +WL GIR Sbjct: 66 LTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIR 97
>YEBS_ECO57 (P0AD04) Inner membrane protein yebS| Length = 427 Score = 31.6 bits (70), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 Query: 225 LQKLAKVAFGSRVRIPGGWG*PFFVVWLQGIR 320 L +LA +AF + +P WG P +WL GIR Sbjct: 66 LTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIR 97
>IRS2B_XENLA (Q5RJW5) Insulin receptor substrate 2-B (IRS-2-B)| Length = 1077 Score = 29.6 bits (65), Expect = 9.2 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = -1 Query: 669 DALTRPNGLRV---P*GKFYLADAGYGAKPGFLPPFRGVRYHLNEWGNNPPINEK 514 + LTRP+ V P +++ YG+ PG L FR + GN PPI E+ Sbjct: 439 ETLTRPSSSSVCGSPSDGGFISSDEYGSSPGDLRYFRVRSNTPDSLGNTPPIQEE 493
>GDA0_WHEAT (P02863) Alpha/beta-gliadin precursor (Prolamin)| Length = 286 Score = 29.6 bits (65), Expect = 9.2 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -2 Query: 266 PHP*TKRHLSQLLKEYS*VSVYPHPTLPSNQTSGIFPKTDYPYPLVGYPSNQTP 105 P+P + SQL Y + +P P LP +Q P+ YP P Y Q P Sbjct: 62 PYPQPQPFPSQL--PYLQLQPFPQPQLPYSQPQPFRPQQPYPQPQPQYSQPQQP 113
>IRS2A_XENLA (Q9DF49) Insulin receptor substrate 2-A (IRS-2-A) (Insulin receptor| substrate-unique) (Insulin receptor substrate-undetermined designation) (xIRS-u) Length = 1074 Score = 29.6 bits (65), Expect = 9.2 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = -1 Query: 669 DALTRPNGLRV---P*GKFYLADAGYGAKPGFLPPFRGVRYHLNEWGNNPPINEK 514 + LTRP+ V P +++ YG+ PG L FR + GN PPI E+ Sbjct: 436 ETLTRPSSSSVCGSPSDGGFISSDEYGSSPGDLRYFRVRSNTPDSLGNTPPIQEE 490 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 112,865,323 Number of Sequences: 219361 Number of extensions: 2655867 Number of successful extensions: 5303 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5080 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5302 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)