ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18n19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472365.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 786 Score = 101 bits (51), Expect = 3e-18 Identities = 105/123 (85%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 707 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 648 Query: 590 ggcttggctccatatccagcatcagctagataaaattttccttatggtacacgaagacca 649 | ||||||||||||||||||||| ||||||| |||||||||| ||| ||| |||| ||| Sbjct: 647 tgtttggctccatatccagcatcaactagatagaattttccttgtgggacatgaaggcca 588 Query: 650 ttt 652 ||| Sbjct: 587 ttt 585
>dbj|AK070418.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049E23, full insert sequence Length = 1593 Score = 101 bits (51), Expect = 3e-18 Identities = 105/123 (85%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 1153 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 1094 Query: 590 ggcttggctccatatccagcatcagctagataaaattttccttatggtacacgaagacca 649 | ||||||||||||||||||||| ||||||| |||||||||| ||| ||| |||| ||| Sbjct: 1093 tgtttggctccatatccagcatcaactagatagaattttccttgtgggacatgaaggcca 1034 Query: 650 ttt 652 ||| Sbjct: 1033 ttt 1031
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 506 aacaactccttctcatttataggaggattgttcccccactcattcaaatggtatctcact 565 |||||||||||||||||| | ||||| ||||||||||| ||||| ||||| | || Sbjct: 147495 aacaactccttctcattttgaaccggattattcccccactctttcaagtggtaccggaca 147554 Query: 566 ccacgaaaagggggcaagaaccctggcttggctccatatccagcatcagctagataaaat 625 |||||||||| |||||||| ||| | ||||||||||||||||||||| ||||||| ||| Sbjct: 147555 gcacgaaaaggaggcaagaatccttgtttggctccatatccagcatcaactagatagaat 147614 Query: 626 tttcct 631 |||||| Sbjct: 147615 tttcct 147620
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 506 aacaactccttctcatttataggaggattgttcccccactcattcaaatggtatctcact 565 |||||||||||||||||| | ||||| ||||||||||| ||||| ||||| | || Sbjct: 10762895 aacaactccttctcattttgaaccggattattcccccactctttcaagtggtaccggaca 10762954 Query: 566 ccacgaaaagggggcaagaaccctggcttggctccatatccagcatcagctagataaaat 625 |||||||||| |||||||| ||| | ||||||||||||||||||||| ||||||| ||| Sbjct: 10762955 gcacgaaaaggaggcaagaatccttgtttggctccatatccagcatcaactagatagaat 10763014 Query: 626 tttcct 631 |||||| Sbjct: 10763015 tttcct 10763020 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 16299954 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 16300013 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 16300014 tgtttggctccatatccagcatcaactagata 16300045 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 2105176 ggcggcggcggcggcgaggcggtgg 2105200 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgagggat 124 ||||||||||||||||| ||||||| Sbjct: 28021272 ttaggtggtgtttggttggagggat 28021248 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tctggcggcggcggcggcga 20 |||||||||||||||||||| Sbjct: 29088000 tctggcggcggcggcggcga 29088019 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 24006217 ctggcggcggcggcggcgag 24006198 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 9127599 ttaggtggtgtttggttggaggga 9127576 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 taggtggtgtttggtttgagggat 124 |||||||||||||||| ||||||| Sbjct: 6965172 taggtggtgtttggttggagggat 6965195 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 6885556 ttaggtggtgtttggttggaggga 6885533
>ref|NM_194710.1| Oryza sativa (japonica cultivar-group) putative transposase (OSJNBb0072F04.7), mRNA Length = 1608 Score = 93.7 bits (47), Expect = 7e-16 Identities = 104/123 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 488 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 429 Query: 590 ggcttggctccatatccagcatcagctagataaaattttccttatggtacacgaagacca 649 | ||||||||||||||| ||||| ||||||| |||||||||| ||| ||| |||| ||| Sbjct: 428 tgtttggctccatatccaccatcaactagatagaattttccttgtgggacatgaaggcca 369 Query: 650 ttt 652 ||| Sbjct: 368 ttt 366
>ref|NM_192116.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1617 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 650 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 591 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcctt 632 | ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 590 tgtttggctccatatccagcatcaactagatagaattttcctt 548
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 91.7 bits (46), Expect = 3e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||| ||||||| ||||| ||||| | ||| |||||||||| |||||||| ||| Sbjct: 6677 ggattattctcccactctttcaagtggtaccgcacagcacgaaaaggaggcaagaatcct 6736 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||||||||| ||||||| ||||||||| Sbjct: 6737 tgtttggctccatatccagcatcaactagatagaattttcct 6778
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 91.7 bits (46), Expect = 3e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||| ||||||| ||||| ||||| | ||| |||||||||| |||||||| ||| Sbjct: 105978 ggattattctcccactctttcaagtggtaccgcacagcacgaaaaggaggcaagaatcct 106037 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||||||||| ||||||| ||||||||| Sbjct: 106038 tgtttggctccatatccagcatcaactagatagaattttcct 106079
>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08, complete sequence Length = 106975 Score = 91.7 bits (46), Expect = 3e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 29252 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 29311 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||||||||| ||||||| ||||||||| Sbjct: 29312 tgtttggctccatatccagcatcaactagatagaattttcct 29353
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 91.7 bits (46), Expect = 3e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 19874444 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 19874503 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||||||||| ||||||| ||||||||| Sbjct: 19874504 tgtttggctccatatccagcatcaactagatagaattttcct 19874545 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 28117237 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 28117178 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 28117177 tgtttggctccatatccagcatcaactagata 28117146 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 538 cccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccctggcttggc 597 ||||||||||||||| || || ||||| |||||||||||||| || || || || || || Sbjct: 1561873 cccccactcattcaagtgatacctcacaccacgaaaagggggtaaaaatccaggttttgc 1561814 Query: 598 tccatatccagcatcagctagataaaattttcct 631 ||||||||| ||||| |||| || ||||||||| Sbjct: 1561813 tccatatcccacatcaactaggtagaattttcct 1561780 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 tttaggtggtgtttggtttgaggga 123 |||||||||||||||||| |||||| Sbjct: 21849217 tttaggtggtgtttggttggaggga 21849193 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 29853146 ttaggtggtgtttggttggaggga 29853169 Score = 40.1 bits (20), Expect = 9.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 8 gcggcggcggcgagncggtgggggtgg 34 |||||||||||||| |||||| ||||| Sbjct: 14182068 gcggcggcggcgaggcggtggcggtgg 14182042
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 91.7 bits (46), Expect = 3e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||| ||||||| ||||| ||||| | ||| |||||||||| |||||||| ||| Sbjct: 3308308 ggattattctcccactctttcaagtggtaccgcacagcacgaaaaggaggcaagaatcct 3308249 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||||||||| ||||||| ||||||||| Sbjct: 3308248 tgtttggctccatatccagcatcaactagatagaattttcct 3308207 Score = 75.8 bits (38), Expect = 2e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||||||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 8143435 ggattattcccccactcattcaagtggtaccggacagcacgaaaaggaggcaagaatcct 8143376 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | |||| |||||||||||||| ||||||| ||||||||| Sbjct: 8143375 ttttaggcttcatatccagcatcaactagatagaattttcct 8143334 Score = 44.1 bits (22), Expect = 0.61 Identities = 30/33 (90%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggtgggggtggga 36 |||||||||||||||||| ||| || ||||||| Sbjct: 4393744 ggcggcggcggcggcgagccggcggtggtggga 4393712 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 479 gtgcgaagagaagaatgccaaagattaaa 507 ||||||||||| ||||||| ||||||||| Sbjct: 23993503 gtgcgaagagaggaatgccgaagattaaa 23993531 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctatttaggtggtgtttgg 114 |||||||||||||||||||| Sbjct: 5090360 gctatttaggtggtgtttgg 5090341
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 91.7 bits (46), Expect = 3e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 28416587 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 28416528 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||||||||| ||||||| ||||||||| Sbjct: 28416527 tgtttggctccatatccagcatcaactagatagaattttcct 28416486 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 |||||||||||||||||||||||| Sbjct: 30941388 ttaggtggtgtttggtttgaggga 30941365 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 tttaggtggtgtttggtttgaggga 123 |||||||||||||||||| |||||| Sbjct: 18965173 tttaggtggtgtttggttggaggga 18965197
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 91.7 bits (46), Expect = 3e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 131687 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 131628 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||||||||| ||||||| ||||||||| Sbjct: 131627 tgtttggctccatatccagcatcaactagatagaattttcct 131586
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 91.7 bits (46), Expect = 3e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||| ||||||| ||||| ||||| | ||| |||||||||| |||||||| ||| Sbjct: 3317021 ggattattctcccactctttcaagtggtaccgcacagcacgaaaaggaggcaagaatcct 3316962 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||||||||| ||||||| ||||||||| Sbjct: 3316961 tgtttggctccatatccagcatcaactagatagaattttcct 3316920 Score = 75.8 bits (38), Expect = 2e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||||||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 8214198 ggattattcccccactcattcaagtggtaccggacagcacgaaaaggaggcaagaatcct 8214139 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | |||| |||||||||||||| ||||||| ||||||||| Sbjct: 8214138 ttttaggcttcatatccagcatcaactagatagaattttcct 8214097 Score = 44.1 bits (22), Expect = 0.61 Identities = 30/33 (90%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggtgggggtggga 36 |||||||||||||||||| ||| || ||||||| Sbjct: 4402438 ggcggcggcggcggcgagccggcggtggtggga 4402406 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 479 gtgcgaagagaagaatgccaaagattaaa 507 ||||||||||| ||||||| ||||||||| Sbjct: 24305172 gtgcgaagagaggaatgccgaagattaaa 24305200 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctatttaggtggtgtttgg 114 |||||||||||||||||||| Sbjct: 5156837 gctatttaggtggtgtttgg 5156818
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 83.8 bits (42), Expect = 7e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 1787525 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 1787584 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 1787585 tgtttggctccatatccaccatcaactagatagaattttcct 1787626 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggt 26 |||||||||||||||||| |||| Sbjct: 2230749 ggcggcggcggcggcgaggcggt 2230727
>gb|AC122147.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0072F04, complete sequence Length = 137724 Score = 83.8 bits (42), Expect = 7e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 5978 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 6037 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 6038 tgtttggctccatatccaccatcaactagatagaattttcct 6079
>gb|AC092553.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0072F04, complete sequence Length = 133121 Score = 83.8 bits (42), Expect = 7e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 39099 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 39158 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 39159 tgtttggctccatatccaccatcaactagatagaattttcct 39200
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 83.8 bits (42), Expect = 7e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 1787525 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 1787584 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 1787585 tgtttggctccatatccaccatcaactagatagaattttcct 1787626 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 18359202 ttaggtggtgtttggttggaggga 18359179 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 13385404 ctggcggcggcggcggcgag 13385423 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggt 26 |||||||||||||||||| |||| Sbjct: 2230749 ggcggcggcggcggcgaggcggt 2230727
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 83.8 bits (42), Expect = 7e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 1787476 ggattattcccccactctttcaagtggtaccggacagcacgaaaaggaggcaagaatcct 1787535 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 1787536 tgtttggctccatatccaccatcaactagatagaattttcct 1787577 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 18369255 ttaggtggtgtttggttggaggga 18369232 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 13392744 ctggcggcggcggcggcgag 13392763 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggt 26 |||||||||||||||||| |||| Sbjct: 2230700 ggcggcggcggcggcgaggcggt 2230678
>ref|XM_471107.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1206 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 538 cccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccctggcttggc 597 ||||||||||||||| || || ||||| |||||||||||||| || || || || || || Sbjct: 663 cccccactcattcaagtgatacctcacaccacgaaaagggggtaaaaatccaggttttgc 604 Query: 598 tccatatccagcatcagctagataaaattttccttatggtacacgaagaccat 650 ||||||||| ||||| |||| || |||||||||| ||| |||||||| |||| Sbjct: 603 tccatatcccacatcaactaggtagaattttccttgtgggacacgaaggccat 551
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||||| |||||| | || |||||||||| |||||||| ||| Sbjct: 1243167 ggattattcccccattcattcagatggtaccggacagcacgaaaaggaggcaagaatcct 1243226 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 1243227 tgtttggctccatatccagcatcaactagata 1243258 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 25203683 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 25203624 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 25203623 tgtttggctccatatccagcatcaactagata 25203592 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 16433863 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 16433922 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 16433923 tgtttggctccatatccagcatcaactagata 16433954 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 537 tcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccctggcttgg 596 |||||||||||||||| || || ||||| ||| |||||||||| || || || || || | Sbjct: 5796508 tcccccactcattcaagtgatacctcacaccatgaaaagggggtaaaaatccaggttttg 5796449 Query: 597 ctccatatccagcatcagctagataaaattttcct 631 |||||||||| |||||| |||| || ||||||||| Sbjct: 5796448 ctccatatcccgcatcaactaggtagaattttcct 5796414 Score = 46.1 bits (23), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtggg 29 |||||||||||||||||| ||||||| Sbjct: 9208846 ggcggcggcggcggcgagtcggtggg 9208871 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggtgggggtggg 35 |||||||||||||||||| |||||||||||| Sbjct: 18375618 ggcggcggcggcggcgagg-ggtgggggtggg 18375588 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 26708072 ttaggtggtgtttggttggaggga 26708049 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tctggcggcggcggcggcga 20 |||||||||||||||||||| Sbjct: 25150210 tctggcggcggcggcggcga 25150229 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||| |||||||| Sbjct: 23910688 ttaggtggtgtttggattgaggga 23910665
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||||| |||||| | || |||||||||| |||||||| ||| Sbjct: 1243167 ggattattcccccattcattcagatggtaccggacagcacgaaaaggaggcaagaatcct 1243226 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 1243227 tgtttggctccatatccagcatcaactagata 1243258 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 25131859 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 25131800 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 25131799 tgtttggctccatatccagcatcaactagata 25131768 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 16387095 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 16387154 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 16387155 tgtttggctccatatccagcatcaactagata 16387186 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 537 tcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccctggcttgg 596 |||||||||||||||| || || ||||| ||| |||||||||| || || || || || | Sbjct: 5796501 tcccccactcattcaagtgatacctcacaccatgaaaagggggtaaaaatccaggttttg 5796442 Query: 597 ctccatatccagcatcagctagataaaattttcct 631 |||||||||| |||||| |||| || ||||||||| Sbjct: 5796441 ctccatatcccgcatcaactaggtagaattttcct 5796407 Score = 46.1 bits (23), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtggg 29 |||||||||||||||||| ||||||| Sbjct: 9208731 ggcggcggcggcggcgagtcggtggg 9208756 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggtgggggtggg 35 |||||||||||||||||| |||||||||||| Sbjct: 18301844 ggcggcggcggcggcgagg-ggtgggggtggg 18301814 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 26636242 ttaggtggtgtttggttggaggga 26636219 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tctggcggcggcggcggcga 20 |||||||||||||||||||| Sbjct: 25078386 tctggcggcggcggcggcga 25078405 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||| |||||||| Sbjct: 23838893 ttaggtggtgtttggattgaggga 23838870
>emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121556 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||||| |||||| | || |||||||||| |||||||| ||| Sbjct: 49615 ggattattcccccattcattcagatggtaccggacagcacgaaaaggaggcaagaatcct 49556 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 49555 tgtttggctccatatccagcatcaactagata 49524
>gb|AC135503.8| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0117L20 map S2137, complete sequence Length = 125303 Score = 75.8 bits (38), Expect = 2e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||||||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 46790 ggattattcccccactcattcaagtggtaccggacagcacgaaaaggaggcaagaatcct 46731 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | |||| |||||||||||||| ||||||| ||||||||| Sbjct: 46730 ttttaggcttcatatccagcatcaactagatagaattttcct 46689
>gb|AY362810.1| Saccharum hybrid cultivar clone Shc-PIF02 transposon PIF-like nonfunctional transposase gene, partial sequence Length = 418 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 |||||| ||||||| |||||||| ||||||| || | ||||||||||| || || ||| Sbjct: 381 ggattgctcccccattcattcaagtggtatcgtacagcccgaaaagggggtaaaaatcct 322 Query: 590 ggcttggctccatatccagcatcagctagataaaattt 627 || ||||||||||||||||||||| |||| ||| |||| Sbjct: 321 ggtttggctccatatccagcatcatctaggtaatattt 284
>ref|XM_473499.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1134 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 791 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 732 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 731 tgtttggctccatatccagcatcaactagata 700
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 147311 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 147370 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 147371 tgtttggctccatatccagcatcaactagata 147402
>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0052F16, complete sequence Length = 162082 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 91307 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 91366 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 91367 tgtttggctccatatccagcatcaactagata 91398
>emb|AL606694.3|OSJN00110 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0078D11, complete sequence Length = 115006 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 3674 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 3615 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 3614 tgtttggctccatatccagcatcaactagata 3583
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 124462 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 124403 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 124402 tgtttggctccatatccagcatcaactagata 124371
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 2282614 ggattattcccccattcattcaggtggtaccggacagcacgaaaaggaggcaagaatcct 2282555 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 2282554 tgtttggctccatatccagcatcaactagata 2282523 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 tttaggtggtgtttggtttgaggga 123 |||||||||||||||||| |||||| Sbjct: 31420698 tttaggtggtgtttggttggaggga 31420674 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtg 27 |||||||||||||||||| ||||| Sbjct: 23905337 ggcggcggcggcggcgaggcggtg 23905360 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 28257172 ttaggtggtgtttggttggaggga 28257149 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 12720233 tggcggcggcggcggcgaggcgg 12720255
>dbj|AP005776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0018G11 Length = 121084 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 18691 ggattattcccccattcattcaggtggtaccggacagcacgaaaaggaggcaagaatcct 18632 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 18631 tgtttggctccatatccagcatcaactagata 18600
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||||| ||||| | || |||||||||| |||||||| ||| Sbjct: 69563 ggattattcccccattcattcaggtggtaccggacagcacgaaaaggaggcaagaatcct 69504 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 69503 tgtttggctccatatccagcatcaactagata 69472
>emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa0054H15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155947 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 139928 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 139869 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 139868 tgtttggctccatatccagcatcaactagata 139837
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 133507 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 133566 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 133567 tgtttggctccatatccagcatcaactagata 133598
>emb|AL713907.3|CNS07YQ7 Oryza sativa chromosome 12, . BAC OJ1057_E03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127989 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| |||||||| ||||| | |||||| | || |||||||||| |||||||| ||| Sbjct: 18528 ggattattcccccattcatttagatggtaccgaacagcacgaaaaggaggcaagaatcct 18469 Query: 590 ggcttggctccatatccagcatcagctagata 621 | ||||||||||||||||||||| ||||||| Sbjct: 18468 tgtttggctccatatccagcatcaactagata 18437
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 537 tcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccctggcttgg 596 |||||||||||||||| || || ||||| |||||||||||||| || || | || || | Sbjct: 15031691 tcccccactcattcaagtgatacctcacaccacgaaaagggggtaaaaatctaggttttg 15031632 Query: 597 ctccatatccagcatcagctagataaaattttcct 631 |||||||||| |||||| |||| || ||||||||| Sbjct: 15031631 ctccatatcccgcatcaactaggtagaattttcct 15031597 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 12815060 ggcggcggcggcggcgaggcggtgg 12815036 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 21554728 ttaggtggtgtttggttggaggga 21554705 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ttgtgtgtttggttgagagg 402 |||||||||||||||||||| Sbjct: 18800913 ttgtgtgtttggttgagagg 18800932
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 537 tcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccctggcttgg 596 |||||||||||||| | || || ||||| |||||||||||||| || || || || || | Sbjct: 27350751 tcccccactcattctagtgatacctcacaccacgaaaagggggtaaaaatccaggttttg 27350810 Query: 597 ctccatatccagcatcagctagataaaattttcct 631 |||||||||| |||||| |||| || ||||||||| Sbjct: 27350811 ctccatatcccgcatcaactaggtagaattttcct 27350845 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || ||||||| || || | ||| ||| Sbjct: 28869633 ggattattcccccactctttcaagtggtaccggacagcacgaaatggagggaggaatcct 28869574 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 || ||||||||||||||||||||| |||| || ||||||||| Sbjct: 28869573 ggtttggctccatatccagcatcaactaggtagaattttcct 28869532 Score = 48.1 bits (24), Expect = 0.039 Identities = 29/31 (93%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgggggtgg 34 |||||||||||||||||| || ||||||||| Sbjct: 5472597 ggcggcggcggcggcgaggcgatgggggtgg 5472627 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 26651634 tggcggcggcggcggcgagtcgg 26651656 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 14530008 ttaggtggtgtttggttggaggga 14529985
>dbj|AP006460.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003M19 Length = 171790 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 537 tcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccctggcttgg 596 |||||||||||||| | || || ||||| |||||||||||||| || || || || || | Sbjct: 56412 tcccccactcattctagtgatacctcacaccacgaaaagggggtaaaaatccaggttttg 56471 Query: 597 ctccatatccagcatcagctagataaaattttcct 631 |||||||||| |||||| |||| || ||||||||| Sbjct: 56472 ctccatatcccgcatcaactaggtagaattttcct 56506
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04 Length = 148848 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 537 tcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccctggcttgg 596 |||||||||||||||| || || ||||| |||||||||||||| || || | || || | Sbjct: 23334 tcccccactcattcaagtgatacctcacaccacgaaaagggggtaaaaatctaggttttg 23275 Query: 597 ctccatatccagcatcagctagataaaattttcct 631 |||||||||| |||||| |||| || ||||||||| Sbjct: 23274 ctccatatcccgcatcaactaggtagaattttcct 23240
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 537 tcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccctggcttgg 596 |||||||||||||||| || || ||||| |||||||||||||| || || | || || | Sbjct: 101137 tcccccactcattcaagtgatacctcacaccacgaaaagggggtaaaaatctaggttttg 101078 Query: 597 ctccatatccagcatcagctagataaaattttcct 631 |||||||||| |||||| |||| || ||||||||| Sbjct: 101077 ctccatatcccgcatcaactaggtagaattttcct 101043
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 537 tcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccctggcttgg 596 |||||||||||||||| || || ||||| ||| |||||||||| || || || || || | Sbjct: 151031 tcccccactcattcaagtgatacctcacaccatgaaaagggggtaaaaatccaggttttg 150972 Query: 597 ctccatatccagcatcagctagataaaattttcct 631 |||||||||| |||||| |||| || ||||||||| Sbjct: 150971 ctccatatcccgcatcaactaggtagaattttcct 150937
>emb|AL606689.4|OSJN00078 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042N22, complete sequence Length = 152676 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 538 cccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccctggcttggc 597 ||||||||||||||| || || ||||| |||||||||||||| || || || || || || Sbjct: 82039 cccccactcattcaagtgatacctcacaccacgaaaagggggtaaaaatccaggttttgc 81980 Query: 598 tccatatccagcatcagctagataaaattttcct 631 ||||||||| ||||| |||| || ||||||||| Sbjct: 81979 tccatatcccacatcaactaggtagaattttcct 81946
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||| ||||| ||||| | || ||||||| || || | ||| ||| Sbjct: 127319 ggattattcccccactctttcaagtggtaccggacagcacgaaatggagggaggaatcct 127260 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 || ||||||||||||||||||||| |||| || ||||||||| Sbjct: 127259 ggtttggctccatatccagcatcaactaggtagaattttcct 127218
>gb|AY362811.1| Zea mays clone Zm-PIF02 transposon PIF-like transposase gene, partial cds Length = 437 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 567 cacgaaaagggggcaagaaccctggcttggctccatatccagcatcagctagataaaatt 626 |||||||||||||||| || || || ||||||||||||||||| || ||||||| |||| Sbjct: 366 cacgaaaagggggcaaaaatccaggtttggctccatatccagcgtccactagatagaatt 307 Query: 627 ttcct 631 ||||| Sbjct: 306 ttcct 302
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 60.0 bits (30), Expect = 1e-05 Identities = 84/102 (82%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||||||||| ||||| | || ||||||| || || | ||| ||| Sbjct: 330527 ggattattcccccactcattcaagtggtaccggacagcacgaaagggaggaaggaatcct 330586 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||||||||| |||| || |||||||| Sbjct: 330587 tgtttggctccatatccagcatcaactaggtagtattttcct 330628 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 2912364 ggcggcggcggcggcgaggcggtgg 2912388 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 5397999 tggcggcggcggcggcgagacgg 5398021 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggt 26 |||||||||||||||||| |||| Sbjct: 3245206 ggcggcggcggcggcgagccggt 3245228
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 60.0 bits (30), Expect = 1e-05 Identities = 84/102 (82%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||||||||| ||||| | || ||||||| || || | ||| ||| Sbjct: 40041 ggattattcccccactcattcaagtggtaccggacagcacgaaagggaggaaggaatcct 40100 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||||||||| |||| || |||||||| Sbjct: 40101 tgtttggctccatatccagcatcaactaggtagtattttcct 40142
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1300_E01 Length = 103022 Score = 60.0 bits (30), Expect = 1e-05 Identities = 84/102 (82%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggtatctcactccacgaaaagggggcaagaaccct 589 ||||| ||||||||||||||||| ||||| | || ||||||| || || | ||| ||| Sbjct: 96953 ggattattcccccactcattcaagtggtaccggacagcacgaaagggaggaaggaatcct 97012 Query: 590 ggcttggctccatatccagcatcagctagataaaattttcct 631 | ||||||||||||||||||||| |||| || |||||||| Sbjct: 97013 tgtttggctccatatccagcatcaactaggtagtattttcct 97054
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 587 cctggcttggctccatatccagcatcagctagataaaattttcct 631 ||||| ||||||||||||||||||||| |||| || ||||||||| Sbjct: 7337677 cctggtttggctccatatccagcatcaactaggtagaattttcct 7337721 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 98 atttaggtggtgtttggtttgagggat 124 ||||||||||||||||||| ||||||| Sbjct: 28188989 atttaggtggtgtttggttggagggat 28188963 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtg 27 |||||||||||||||||| ||||| Sbjct: 33526509 ggcggcggcggcggcgaggcggtg 33526532 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 tttaggtggtgtttggtttgaggga 123 |||||||||||||||||| |||||| Sbjct: 28896076 tttaggtggtgtttggttggaggga 28896100 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggta 558 ||||| ||||||||||||||||| ||||| Sbjct: 7337626 ggattattcccccactcattcaagtggta 7337654 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 tggcggcggcggcggcgagncggt 26 ||||||||||||||||||| |||| Sbjct: 4161680 tggcggcggcggcggcgagacggt 4161657 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 29744311 ctggcggcggcggcggcgag 29744292 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 27754439 ttaggtggtgtttggttggaggga 27754462
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 587 cctggcttggctccatatccagcatcagctagataaaattttcct 631 ||||| ||||||||||||||||||||| |||| || ||||||||| Sbjct: 88933 cctggtttggctccatatccagcatcaactaggtagaattttcct 88977 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggta 558 ||||| ||||||||||||||||| ||||| Sbjct: 88882 ggattattcccccactcattcaagtggta 88910
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 587 cctggcttggctccatatccagcatcagctagataaaattttcct 631 ||||| ||||||||||||||||||||| |||| || ||||||||| Sbjct: 7335572 cctggtttggctccatatccagcatcaactaggtagaattttcct 7335616 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 98 atttaggtggtgtttggtttgagggat 124 ||||||||||||||||||| ||||||| Sbjct: 28280313 atttaggtggtgtttggttggagggat 28280287 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtg 27 |||||||||||||||||| ||||| Sbjct: 33616981 ggcggcggcggcggcgaggcggtg 33617004 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 tttaggtggtgtttggtttgaggga 123 |||||||||||||||||| |||||| Sbjct: 28987498 tttaggtggtgtttggttggaggga 28987522 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 530 ggattgttcccccactcattcaaatggta 558 ||||| ||||||||||||||||| ||||| Sbjct: 7335521 ggattattcccccactcattcaagtggta 7335549 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 tggcggcggcggcggcgagncggt 26 ||||||||||||||||||| |||| Sbjct: 4161789 tggcggcggcggcggcgagacggt 4161766 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 29835733 ctggcggcggcggcggcgag 29835714 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 27845762 ttaggtggtgtttggttggaggga 27845785
>ref|XM_463137.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1998 Score = 48.1 bits (24), Expect = 0.039 Identities = 51/60 (85%) Strand = Plus / Minus Query: 593 ttggctccatatccagcatcagctagataaaattttccttatggtacacgaagaccattt 652 |||||||| |||||| ||||| |||| || |||||||||| || ||| ||||||||||| Sbjct: 677 ttggctccgtatccaacatcaactaggtagaattttccttgggggacatgaagaccattt 618
>ref|XM_477025.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1533 Score = 48.1 bits (24), Expect = 0.039 Identities = 29/31 (93%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgggggtgg 34 |||||||||||||||||| || ||||||||| Sbjct: 89 ggcggcggcggcggcgaggcgatgggggtgg 119
>emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for S-adenosylmethionine decarboxylase Length = 1893 Score = 48.1 bits (24), Expect = 0.039 Identities = 29/31 (93%) Strand = Plus / Minus Query: 5 gcggcggcggcggcgagncggtgggggtggg 35 |||| |||||||||||| ||||||||||||| Sbjct: 31 gcggtggcggcggcgagacggtgggggtggg 1
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 600 catatccagcatcagctagataaaattttcct 631 |||||||||||||||||| | ||||||||||| Sbjct: 19803119 catatccagcatcagctaaaaaaaattttcct 19803150 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgagggat 124 ||||||||||||||||| ||||||| Sbjct: 9392657 ttaggtggtgtttggttggagggat 9392633 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtg 27 |||||||||||||||||| ||||| Sbjct: 7780838 ggcggcggcggcggcgagccggtg 7780861 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 22953780 ttaggtggtgtttggttggaggga 22953757
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12 Length = 161277 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 |||||||||||||||||||||||| Sbjct: 141755 ttaggtggtgtttggtttgaggga 141732
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0551A03 Length = 173027 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 600 catatccagcatcagctagataaaattttcct 631 |||||||||||||||||| | ||||||||||| Sbjct: 70164 catatccagcatcagctaaaaaaaattttcct 70195
>dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E02 Length = 139321 Score = 48.1 bits (24), Expect = 0.039 Identities = 29/31 (93%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgggggtgg 34 |||||||||||||||||| || ||||||||| Sbjct: 106578 ggcggcggcggcggcgaggcgatgggggtgg 106608
>dbj|AK066005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045L13, full insert sequence Length = 1653 Score = 48.1 bits (24), Expect = 0.039 Identities = 51/60 (85%) Strand = Plus / Minus Query: 593 ttggctccatatccagcatcagctagataaaattttccttatggtacacgaagaccattt 652 |||||||| |||||| ||||| |||| || |||||||||| || ||| ||||||||||| Sbjct: 1079 ttggctccgtatccaacatcaactaggtagaattttccttgggggacatgaagaccattt 1020
>dbj|AK063341.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-B01, full insert sequence Length = 1533 Score = 48.1 bits (24), Expect = 0.039 Identities = 29/31 (93%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgggggtgg 34 |||||||||||||||||| || ||||||||| Sbjct: 89 ggcggcggcggcggcgaggcgatgggggtgg 119
>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete sequence Length = 122497 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 98 atttaggtggtgtttggtttgagggat 124 ||||||||||||||||||| ||||||| Sbjct: 40130 atttaggtggtgtttggttggagggat 40104
>dbj|AK106352.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A01, full insert sequence Length = 2036 Score = 46.1 bits (23), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtggg 29 |||||||||||||||||| ||||||| Sbjct: 221 ggcggcggcggcggcgagtcggtggg 246
>emb|AL731760.2|CNS07YPJ Oryza sativa chromosome 12, . BAC OJ1005_C11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104533 Score = 46.1 bits (23), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtggg 29 |||||||||||||||||| ||||||| Sbjct: 64736 ggcggcggcggcggcgagtcggtggg 64761
>ref|XM_480119.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1133 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 73 ggcggcggcggcggcgaggcggtgg 97
>ref|XM_475574.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3831 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 55 ggcggcggcggcggcgaggcggtgg 79
>ref|XM_450796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 586 ggcggcggcggcggcgaggcggtgg 610
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 44.1 bits (22), Expect = 0.61 Identities = 30/33 (90%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggtgggggtggga 36 |||||||||||||||||| ||| || ||||||| Sbjct: 45107 ggcggcggcggcggcgagccggcggtggtggga 45075
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 122837 ggcggcggcggcggcgaggcggtgg 122813
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 85426 ggcggcggcggcggcgaggcggtgg 85450
>dbj|AK121325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117E05, full insert sequence Length = 2093 Score = 44.1 bits (22), Expect = 0.61 Identities = 30/33 (90%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggtgggggtggga 36 |||||||||||||||||| ||| || ||||||| Sbjct: 107 ggcggcggcggcggcgagccggcggtggtggga 75
>dbj|AK110841.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-B06, full insert sequence Length = 1565 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 332 ggcggcggcggcggcgaggcggtgg 356
>dbj|AK109659.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-G02, full insert sequence Length = 1135 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 75 ggcggcggcggcggcgaggcggtgg 99
>dbj|AK107339.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-G01, full insert sequence Length = 1750 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 1221 ggcggcggcggcggcgaggcggtgg 1197
>emb|AJ535068.1|OSA535068 Oryza sativa (japonica cultivar-group) mdr3 gene for MDR-like ABC transporter, exons 1-10 Length = 5693 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 55 ggcggcggcggcggcgaggcggtgg 79
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 44.1 bits (22), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtgg 28 |||||||||||||||||| |||||| Sbjct: 72017 ggcggcggcggcggcgaggcggtgg 72041
>ref|XM_470533.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 537 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 tggcggcggcggcggcgagncggt 26 ||||||||||||||||||| |||| Sbjct: 56 tggcggcggcggcggcgagacggt 79
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgagggat 124 ||||||||||||||||| ||||||| Sbjct: 101437 ttaggtggtgtttggttggagggat 101413
>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete sequence Length = 166888 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggtg 27 |||||||||||||||||| ||||| Sbjct: 138571 ggcggcggcggcggcgaggcggtg 138548
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 tttaggtggtgtttggtttgaggga 123 |||||||||||||||||| |||||| Sbjct: 79371 tttaggtggtgtttggttggaggga 79395
>gb|AC125780.2| Oryza sativa (japonica culitvar-group) chromosome 11 BAC clone OSJNBa0030I15, complete sequence Length = 148498 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 479 gtgcgaagagaagaatgccaaagattaaa 507 ||||||||||| ||||||| ||||||||| Sbjct: 61370 gtgcgaagagaggaatgccgaagattaaa 61398
>gb|AC148106.1| Homo sapiens chromosome 8 clone RP11-65P161 map p22-p21, complete sequence Length = 165799 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 gggggtgggaggaaattcttg 47 ||||||||||||||||||||| Sbjct: 9346 gggggtgggaggaaattcttg 9326
>ref|XM_850851.1| PREDICTED: Canis familiaris similar to Ca2+-dependent secretion activator isoform 3, transcript variant 7 (LOC484705), mRNA Length = 4874 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 tctggcggcggcggcggcgag 21 ||||||||||||||||||||| Sbjct: 124 tctggcggcggcggcggcgag 144
>ref|XM_850805.1| PREDICTED: Canis familiaris similar to Ca2+-dependent secretion activator isoform 3, transcript variant 6 (LOC484705), mRNA Length = 4745 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 tctggcggcggcggcggcgag 21 ||||||||||||||||||||| Sbjct: 124 tctggcggcggcggcggcgag 144
>gb|AC131269.3| Homo sapiens chromosome 8, clone RP11-416I21, complete sequence Length = 190031 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 gggggtgggaggaaattcttg 47 ||||||||||||||||||||| Sbjct: 9342 gggggtgggaggaaattcttg 9322
>gb|AC000385.2| Homo sapiens chromosome 11 clone PAC pDJ392a17, complete sequence Length = 164155 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 gggggtgggaggaaattcttg 47 ||||||||||||||||||||| Sbjct: 103853 gggggtgggaggaaattcttg 103833 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 gggggtgggaggaaattcttg 47 ||||||||||||||||||||| Sbjct: 45582 gggggtgggaggaaattcttg 45562
>gb|AC092766.4| Homo sapiens chromosome 8, clone RP11-483N3, complete sequence Length = 155847 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 gggggtgggaggaaattcttg 47 ||||||||||||||||||||| Sbjct: 15626 gggggtgggaggaaattcttg 15646
>gb|AC073057.6| Homo sapiens BAC clone RP11-114G11 from 7, complete sequence Length = 178105 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 102 aggtggtgtttggtttgagggataa 126 ||||||||||||||| ||||||||| Sbjct: 138048 aggtggtgtttggttagagggataa 138072
>gb|AC134684.5| Homo sapiens chromosome 8, clone RP11-1118M6, complete sequence Length = 175202 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 gggggtgggaggaaattcttg 47 ||||||||||||||||||||| Sbjct: 173115 gggggtgggaggaaattcttg 173135
>gb|AC153461.2| Homo sapiens chromosome 7 clone WI2-948H7, complete sequence Length = 38508 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 102 aggtggtgtttggtttgagggataa 126 ||||||||||||||| ||||||||| Sbjct: 8147 aggtggtgtttggttagagggataa 8123
>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01, complete sequence Length = 127713 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 tttaggtggtgtttggtttgaggga 123 |||||||||||||||||| |||||| Sbjct: 33818 tttaggtggtgtttggttggaggga 33794
>gb|AC068587.16| Homo sapiens chromosome 8, clone RP11-303G3, complete sequence Length = 174171 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 gggggtgggaggaaattcttg 47 ||||||||||||||||||||| Sbjct: 126288 gggggtgggaggaaattcttg 126268 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 gggggtgggaggaaattcttg 47 ||||||||||||||||||||| Sbjct: 68312 gggggtgggaggaaattcttg 68292
>gb|AC105233.12| Homo sapiens chromosome 8, clone RP11-52B19, complete sequence Length = 151841 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 gggggtgggaggaaattcttg 47 ||||||||||||||||||||| Sbjct: 67021 gggggtgggaggaaattcttg 67001
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 tggcggcggcggcggcgagncggt 26 ||||||||||||||||||| |||| Sbjct: 62317 tggcggcggcggcggcgagacggt 62294
>dbj|AP004357.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1074C08 Length = 165701 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 tttaggtggtgtttggtttgaggga 123 |||||||||||||||||| |||||| Sbjct: 137563 tttaggtggtgtttggttggaggga 137587
>dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129H01 Length = 101104 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 tttaggtggtgtttggtttgaggga 123 |||||||||||||||||| |||||| Sbjct: 22216 tttaggtggtgtttggttggaggga 22240
>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03 Length = 119796 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 tttaggtggtgtttggtttgaggga 123 |||||||||||||||||| |||||| Sbjct: 103272 tttaggtggtgtttggttggaggga 103248
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgagggat 124 ||||||||||||||||| ||||||| Sbjct: 121067 ttaggtggtgtttggttggagggat 121043
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtg 27 |||||||||||||||||| ||||| Sbjct: 93336 ggcggcggcggcggcgagccggtg 93359
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtg 27 |||||||||||||||||| ||||| Sbjct: 127003 ggcggcggcggcggcgaggcggtg 127026
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0496E03 Length = 138622 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtg 27 |||||||||||||||||| ||||| Sbjct: 39301 ggcggcggcggcggcgaggcggtg 39324
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 tttaggtggtgtttggtttgaggga 123 |||||||||||||||||| |||||| Sbjct: 56095 tttaggtggtgtttggttggaggga 56071
>dbj|AK065100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N01, full insert sequence Length = 2646 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggtg 27 |||||||||||||||||| ||||| Sbjct: 405 ggcggcggcggcggcgaggcggtg 428
>dbj|AK059573.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A04, full insert sequence Length = 1843 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggtgggggtggg 35 |||||||||||||||||| |||||||||||| Sbjct: 72 ggcggcggcggcggcgagg-ggtgggggtggg 42
>gb|U42555.1|PBU42555 Peanut bud necrosis virus non-structural protein (NSm) and glycoprotein precursor (GPp) genes, complete cds Length = 4801 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 attttttgttgtttggttaca 310 ||||||||||||||||||||| Sbjct: 2377 attttttgttgtttggttaca 2397
>gb|AY871097.2| Groundnut bud necrosis virus movement protein (NSm) and glycoprotein (G1/G2) genes, complete cds Length = 4815 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 attttttgttgtttggttaca 310 ||||||||||||||||||||| Sbjct: 2391 attttttgttgtttggttaca 2411
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggtgggggtggg 35 |||||||||||||||||| |||||||||||| Sbjct: 27517 ggcggcggcggcggcgagg-ggtgggggtggg 27487
>dbj|AP004528.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT03B03, TM0057b, complete sequence Length = 77452 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 603 atccagcatcagctagataaaattttcct 631 ||||||||||||| |||||| |||||||| Sbjct: 12857 atccagcatcagcaagataatattttcct 12829
>gb|AF125163.2| Bacteriophage K139, complete genome Length = 33106 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 gagttggataaccgcattatt 342 ||||||||||||||||||||| Sbjct: 25590 gagttggataaccgcattatt 25610
>emb|Z49275.1|TM5S25SRR T.matsutake genes for 5S and 25S (partial) ribosomal RNA Length = 1016 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 gggtgggaggaaattcttgtg 49 ||||||||||||||||||||| Sbjct: 984 gggtgggaggaaattcttgtg 1004
>ref|XM_475466.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 70 ctggcggcggcggcggcgag 89
>ref|NM_194771.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase 4 (OSJNBa0087H07.8), mRNA Length = 1923 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggt 26 |||||||||||||||||| |||| Sbjct: 492 ggcggcggcggcggcgaggcggt 514
>ref|NM_196422.1| Oryza sativa (japonica cultivar-group) putative glucosyltransferase (OSJNBa0060A14.12), mRNA Length = 1485 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 68 ctggcggcggcggcggcgag 49
>ref|XM_479298.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1063 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 30 tggcggcggcggcggcgagtcgg 8
>ref|XM_506507.1| PREDICTED Oryza sativa (japonica cultivar-group), P0524G08.115 mRNA Length = 1566 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 30 tggcggcggcggcggcgagtcgg 8
>ref|XM_471773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 40.1 bits (20), Expect = 9.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 8 gcggcggcggcgagncggtgggggtgg 34 |||||||||||||| |||||| ||||| Sbjct: 35 gcggcggcggcgaggcggtggcggtgg 9
>gb|AC145323.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018N12, complete sequence Length = 137127 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctatttaggtggtgtttgg 114 |||||||||||||||||||| Sbjct: 67353 gctatttaggtggtgtttgg 67372
>gb|AC121362.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009N21, complete sequence Length = 164925 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 4254 ttaggtggtgtttggttggaggga 4231
>gb|AC104274.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1171_H02, complete sequence Length = 109969 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 109597 ttaggtggtgtttggttggaggga 109574
>ref|XM_363612.1| Magnaporthe grisea 70-15 hypothetical protein (MG01538.4) partial mRNA Length = 4047 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ggaatattccttcaaaagct 235 |||||||||||||||||||| Sbjct: 1011 ggaatattccttcaaaagct 992
>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete sequence Length = 112892 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 105150 ctggcggcggcggcggcgag 105169
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 27066 ctggcggcggcggcggcgag 27085
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 11354 ttaggtggtgtttggttggaggga 11331
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 74706 ctggcggcggcggcggcgag 74687
>ref|XM_956312.1| Neurospora crassa OR74A hypothetical protein (NCU01319.1) partial mRNA Length = 1866 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 1721 ctggcggcggcggcggcgag 1740
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tctggcggcggcggcggcga 20 |||||||||||||||||||| Sbjct: 98055 tctggcggcggcggcggcga 98074
>ref|XM_326811.1| Neurospora crassa OR74A hypothetical protein (NCU01319.1) partial mRNA Length = 1866 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 1721 ctggcggcggcggcggcgag 1740
>gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0067H15, complete sequence Length = 184316 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 taggtggtgtttggtttgagggat 124 |||||||||||||||| ||||||| Sbjct: 90095 taggtggtgtttggttggagggat 90118 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 10479 ttaggtggtgtttggttggaggga 10456
>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0074P11, complete sequence Length = 148753 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 116510 ttaggtggtgtttggttggaggga 116487
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tctggcggcggcggcggcga 20 |||||||||||||||||||| Sbjct: 14224 tctggcggcggcggcggcga 14243
>gb|AC101915.7| Mus musculus chromosome 1, clone RP24-388P13, complete sequence Length = 207724 Score = 40.1 bits (20), Expect = 9.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 7 ggcggcggcggcgagncggtgggggtg 33 ||||||||||||||| ||| ||||||| Sbjct: 108056 ggcggcggcggcgagccggcgggggtg 108030
>ref|XM_989786.1| PREDICTED: Mus musculus RIKEN cDNA 9630037P07 gene (9630037P07Rik), mRNA Length = 2273 Score = 40.1 bits (20), Expect = 9.6 Identities = 25/27 (92%) Strand = Plus / Plus Query: 7 ggcggcggcggcgagncggtgggggtg 33 ||||||||||||||| ||| ||||||| Sbjct: 667 ggcggcggcggcgagccggcgggggtg 693
>ref|XM_909322.2| PREDICTED: Mus musculus RIKEN cDNA 9630037P07 gene (9630037P07Rik), mRNA Length = 2213 Score = 40.1 bits (20), Expect = 9.6 Identities = 25/27 (92%) Strand = Plus / Plus Query: 7 ggcggcggcggcgagncggtgggggtg 33 ||||||||||||||| ||| ||||||| Sbjct: 667 ggcggcggcggcgagccggcgggggtg 693
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 6182 ctggcggcggcggcggcgag 6201
>gb|AC126682.3| Mus musculus BAC clone RP23-8E3 from 15, complete sequence Length = 221352 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 ttggctccatatccagcatc 612 |||||||||||||||||||| Sbjct: 195299 ttggctccatatccagcatc 195318
>ref|XM_547149.2| PREDICTED: Canis familiaris similar to transcription factor AP-4 (activating enhancer-binding protein 4) (LOC490029), mRNA Length = 1398 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 95 ctggcggcggcggcggcgag 76
>emb|AL133340.27| Human DNA sequence from clone RP11-204H22 on chromosome 20 Contains part of a novel gene, ESTs, STSs and GSSs, complete sequence Length = 138442 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gtagggtggggataaacaga 209 |||||||||||||||||||| Sbjct: 47284 gtagggtggggataaacaga 47303
>gb|AC092489.4| Oryza sativa chromosome 10 BAC OSJNBa0066I08 genomic sequence, complete sequence Length = 25375 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 9793 ttaggtggtgtttggttggaggga 9770
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 40.1 bits (20), Expect = 9.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 8 gcggcggcggcgagncggtgggggtgg 34 |||||||||||||| |||||| ||||| Sbjct: 19834 gcggcggcggcgaggcggtggcggtgg 19808
>emb|AL513464.1|NCB12K8 Neurospora crassa DNA linkage group V BAC clone B12K8 Length = 67453 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 51771 ctggcggcggcggcggcgag 51790
>emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cosmid contig 12F11 Length = 74317 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 1236 ctggcggcggcggcggcgag 1255
>emb|AL138652.1|ATT18B22 Arabidopsis thaliana DNA chromosome 3, BAC clone T18B22 Length = 91567 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 600 catatccagcatcagctagataaaattttcct 631 |||||||| |||| ||||||||||||||||| Sbjct: 36974 catatccacaatcaactagataaaattttcct 37005
>tpg|BK002574.1| TPA: TPA_inf: Drosophila melanogaster HDC13937 (HDC13937) gene, complete cds Length = 1561 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 attagatgagttggataacc 334 |||||||||||||||||||| Sbjct: 888 attagatgagttggataacc 907
>gb|AE011766.1| Xanthomonas axonopodis pv. citri str. 306, section 144 of 469 of the complete genome Length = 10807 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 5657 ctggcggcggcggcggcgag 5638
>tpg|BK005052.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 49 (WRKY49) gene, complete cds Length = 2920 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 2645 ctggcggcggcggcggcgag 2664
>gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, complete sequence Length = 156654 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 4 ggcggcggcggcggcgagncggt 26 |||||||||||||||||| |||| Sbjct: 56403 ggcggcggcggcggcgaggcggt 56381
>gb|AF434665.1|AF434665 Petromyzon marinus Hox1w (hox1w) mRNA, partial cds Length = 1212 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 60 tggcggcggcggcggcgaggcgg 82
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 5227522 ctggcggcggcggcggcgag 5227503
>gb|AC154451.2| Mus musculus BAC clone RP24-171K15 from chromosome 13, complete sequence Length = 162744 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 aatattccttcaaaagctgg 237 |||||||||||||||||||| Sbjct: 43496 aatattccttcaaaagctgg 43477
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 77781 ctggcggcggcggcggcgag 77800
>tpg|BK000092.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like A2 gene, complete cds Length = 10800 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 2980 ctggcggcggcggcggcgag 2961
>gb|AC074136.4| Homo sapiens chromosome 16 clone CTD-2318B16, complete sequence Length = 105956 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 gttgagaggattgaagaggg 413 |||||||||||||||||||| Sbjct: 76601 gttgagaggattgaagaggg 76582
>gb|AC011615.4|AC011615 Drosophila melanogaster, chromosome 3R, region 89D-89D, BAC clone BACR01H23, complete sequence Length = 199653 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 attagatgagttggataacc 334 |||||||||||||||||||| Sbjct: 60618 attagatgagttggataacc 60637
>gb|AC093894.2| Homo sapiens BAC clone RP11-714E5 from 2, complete sequence Length = 105489 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 ccccactcattcaaatggta 558 |||||||||||||||||||| Sbjct: 24743 ccccactcattcaaatggta 24762
>gb|AC007595.9| Homo sapiens chromosome 16 clone RP11-109M19, complete sequence Length = 186303 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gttgagaggattgaagaggg 413 |||||||||||||||||||| Sbjct: 165036 gttgagaggattgaagaggg 165055
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 59455 ttaggtggtgtttggttggaggga 59432
>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056O06 Length = 151038 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 67810 tggcggcggcggcggcgagacgg 67832
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 116338 ttaggtggtgtttggttggaggga 116315
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 128602 ttaggtggtgtttggttggaggga 128579
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 20265 ttaggtggtgtttggttggaggga 20242
>dbj|AP005783.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0095H08 Length = 140777 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 43273 ttaggtggtgtttggttggaggga 43250
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0086N11 Length = 146185 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 68510 tggcggcggcggcggcgaggcgg 68532
>dbj|AP001311.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MVA11 Length = 83339 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 aacaactccttctcatttat 525 |||||||||||||||||||| Sbjct: 41591 aacaactccttctcatttat 41572
>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1743_B12 Length = 175645 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 48929 ttaggtggtgtttggttggaggga 48906
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 4 ggcggcggcggcggcgagncggt 26 |||||||||||||||||| |||| Sbjct: 22773 ggcggcggcggcggcgagccggt 22795
>emb|AJ277210.1|ASA277210 Avena sativa mRNA for chlorophyll synthase (chlG gene) Length = 1428 Score = 40.1 bits (20), Expect = 9.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 3 tggcggcggcggcggcgagncggtggg 29 ||||||||||||||||||| |||||| Sbjct: 37 tggcggcggcggcggcgagagggtggg 11
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 69238 tggcggcggcggcggcgagtcgg 69260
>dbj|AK107986.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-F01, full insert sequence Length = 959 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggcggcggcggcggcgag 21 |||||||||||||||||||| Sbjct: 142 ctggcggcggcggcggcgag 161
>dbj|AK073802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066O20, full insert sequence Length = 1063 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 30 tggcggcggcggcggcgagtcgg 8
>dbj|AK071948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078J21, full insert sequence Length = 1334 Score = 40.1 bits (20), Expect = 9.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 8 gcggcggcggcgagncggtgggggtgg 34 |||||||||||||| |||||| ||||| Sbjct: 89 gcggcggcggcgaggcggtggcggtgg 63
>dbj|AK068695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160G01, full insert sequence Length = 3151 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 201 tggcggcggcggcggcgaggcgg 223
>dbj|AK068478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152N07, full insert sequence Length = 1566 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 30 tggcggcggcggcggcgagtcgg 8
>gb|AC007565.1|AC007565 Homo sapiens chromosome 19, cosmid R27656, complete sequence Length = 42030 Score = 40.1 bits (20), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 tggcggcggcggcggcgagncgg 25 ||||||||||||||||||| ||| Sbjct: 30742 tggcggcggcggcggcgaggcgg 30764
>gb|AE003713.3| Drosophila melanogaster chromosome 3R, section 51 of 118 of the complete sequence Length = 226561 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 attagatgagttggataacc 334 |||||||||||||||||||| Sbjct: 58786 attagatgagttggataacc 58805
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 134072 ttaggtggtgtttggttggaggga 134095
>emb|AL731743.2|CNS08C7S Oryza sativa chromosome 12, . BAC OSJNBa0001B02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 93872 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tctggcggcggcggcggcga 20 |||||||||||||||||||| Sbjct: 50853 tctggcggcggcggcggcga 50834
>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144767 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||| |||||||| Sbjct: 62495 ttaggtggtgtttggattgaggga 62518
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 63052 ttaggtggtgtttggttggaggga 63075
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 ttaggtggtgtttggtttgaggga 123 ||||||||||||||||| |||||| Sbjct: 90906 ttaggtggtgtttggttggaggga 90929
>gb|AC147041.3| Mus musculus BAC clone RP23-129J8 from 15, complete sequence Length = 190287 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 ttggctccatatccagcatc 612 |||||||||||||||||||| Sbjct: 14809 ttggctccatatccagcatc 14828
>emb|AL022271.1|CEF32F2 Caenorhabditis elegans Cosmid F32F2, complete sequence Length = 17442 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 caatttgtttgaggtggtaa 451 |||||||||||||||||||| Sbjct: 12929 caatttgtttgaggtggtaa 12948
>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds Length = 2447 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gaatattccttcaaaagctg 236 |||||||||||||||||||| Sbjct: 180 gaatattccttcaaaagctg 199 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,728,655 Number of Sequences: 3902068 Number of extensions: 7728655 Number of successful extensions: 375129 Number of sequences better than 10.0: 181 Number of HSP's better than 10.0 without gapping: 223 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 338176 Number of HSP's gapped (non-prelim): 36915 length of query: 699 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 676 effective length of database: 17,143,297,704 effective search space: 11588869247904 effective search space used: 11588869247904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
