>SNX2_MOUSE (Q9CWK8) Sorting nexin-2|
          Length = 519

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 26/129 (20%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
 Frame = -3

Query: 642 FEEPLKDYVRAVQSIKATMLDRANAFRQHFDLDQERKYKELNLEKMKFMN-PXXXXXXXX 466
           F E L DY+R + ++K     R   +++  D       K     KM   N P        
Sbjct: 389 FSELLSDYIRLIAAVKGVFDHRMKCWQKWEDAQITLLKKRETEAKMMVANKPDKIQQAKN 448

Query: 465 XXXELKAASEEATKRYEHIVSVMNDELARFQEQKTADIGLAFHEFAKGQAKLAKDIADAW 286
              E +A  ++  + +E I   +  E+ RF++++  D      ++ +   +  + +   W
Sbjct: 449 EIREWEAKVQQGERDFEQISKTIRKEVGRFEKERVKDFKAVIIKYLESLVQTQQQLIKYW 508

Query: 285 RSVLPKLEA 259
            + LP+ +A
Sbjct: 509 EAFLPEAKA 517

>SNX2_HUMAN (O60749) Sorting nexin-2|
          Length = 519

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
 Frame = -3

Query: 642 FEEPLKDYVRAVQSIKATMLDRANAFRQHFDLDQER-KYKELNLEKMKFMNPXXXXXXXX 466
           F E L DY+R + ++K     R   +++  D      K +E   + M    P        
Sbjct: 389 FSELLSDYIRLIAAVKGVFDHRMKCWQKWEDAQITLLKKREAEAKMMVANKPDKIQQAKN 448

Query: 465 XXXELKAASEEATKRYEHIVSVMNDELARFQEQKTADIGLAFHEFAKGQAKLAKDIADAW 286
              E +A  ++  + +E I   +  E+ RF++++  D      ++ +   +  + +   W
Sbjct: 449 EIREWEAKVQQGERDFEQISKTIRKEVGRFEKERVKDFKTVIIKYLESLVQTQQQLIKYW 508

Query: 285 RSVLPKLEA 259
            + LP+ +A
Sbjct: 509 EAFLPEAKA 517

>SNX1_MOUSE (Q9WV80) Sorting nexin-1|
          Length = 522

 Score = 37.4 bits (85), Expect = 0.039
 Identities = 26/129 (20%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
 Frame = -3

Query: 636 EPLKDYVRAVQSIKATMLDRANAFRQHFDLDQERKYKELNLEKMKFMN-PXXXXXXXXXX 460
           E L DY+R +  ++A    R   +++  D     + K  +  ++ + N P          
Sbjct: 394 ELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKRESEARLLWANKPDKLQQAKDEI 453

Query: 459 XELKAASEEATKRYEHIVSVMNDELARFQEQKTADIGLAFHEFAKGQAKLAKDIADAWRS 280
            E ++   +  + +E I +V+  E+ RF+++K+ D      ++ +      + +A  W +
Sbjct: 454 TEWESRVTQYERDFERISTVVRKEVTRFEKEKSKDFKNHVMKYLETLLHSQQQLAKYWEA 513

Query: 279 VLPKLEACS 253
            LP+ +A S
Sbjct: 514 FLPEAKAIS 522


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,014,322
Number of Sequences: 219361
Number of extensions: 1559385
Number of successful extensions: 3994
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3994
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6086476506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)