Clone Name | rbasd18n14 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TILS_MYCH2 (Q601M6) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... | 30 | 2.7 | 2 | K0427_HUMAN (O43310) Protein KIAA0427 | 29 | 4.5 | 3 | K0427_MOUSE (Q6PEE2) Protein KIAA0427 homolog | 29 | 4.5 | 4 | LGT_MYCGA (Q7NAE3) Prolipoprotein diacylglyceryl transferase (EC... | 29 | 4.5 | 5 | CYB_ARTJA (Q95738) Cytochrome b | 29 | 4.5 | 6 | CYB_ARTTL (Q95750) Cytochrome b | 29 | 5.9 | 7 | ATS19_MOUSE (P59509) ADAMTS-19 precursor (EC 3.4.24.-) (A disint... | 28 | 7.7 |
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>TILS_MYCH2 (Q601M6) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 297 Score = 30.0 bits (66), Expect = 2.7 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = -2 Query: 159 FLKWREKKEICYLWCGLQLTRLDDRSNYLYIYKMQQGNCFGFALSKDS 16 FL WR KK+I + ++ LDD+SN+ Y Q N F L K S Sbjct: 145 FLYWRTKKQIIRICQQKKIPYLDDQSNFTGKY---QRNQIRFLLEKKS 189
>K0427_HUMAN (O43310) Protein KIAA0427| Length = 598 Score = 29.3 bits (64), Expect = 4.5 Identities = 19/63 (30%), Positives = 31/63 (49%) Frame = -2 Query: 291 FICYVQLTMRVQTGERFRVFIASVLFAVGFCCIQFMGFRRNECCFLKWREKKEICYLWCG 112 F+C V TMR TGE FRV + + + C++ + L+ ++ KE L C Sbjct: 480 FLCEVFGTMRSSTGEPFRVLVCPI-----YTCLREL---------LQSQDVKEDAVLCCS 525 Query: 111 LQL 103 ++L Sbjct: 526 MEL 528
>K0427_MOUSE (Q6PEE2) Protein KIAA0427 homolog| Length = 623 Score = 29.3 bits (64), Expect = 4.5 Identities = 19/63 (30%), Positives = 31/63 (49%) Frame = -2 Query: 291 FICYVQLTMRVQTGERFRVFIASVLFAVGFCCIQFMGFRRNECCFLKWREKKEICYLWCG 112 F+C V TMR TGE FRV + + + C++ + L+ ++ KE L C Sbjct: 505 FLCEVFGTMRSSTGEPFRVLVCPI-----YTCLREL---------LQSQDVKEDAVLCCS 550 Query: 111 LQL 103 ++L Sbjct: 551 MEL 553
>LGT_MYCGA (Q7NAE3) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 369 Score = 29.3 bits (64), Expect = 4.5 Identities = 19/73 (26%), Positives = 38/73 (52%) Frame = -2 Query: 279 VQLTMRVQTGERFRVFIASVLFAVGFCCIQFMGFRRNECCFLKWREKKEICYLWCGLQLT 100 ++L + Q +F+ F+ S++ +V F +GF + F ++R KK +L+ +++ Sbjct: 259 IRLIIETQRDSQFK-FVTSIVTSVLFLLGGSIGFIFTQWIFPRFRNKKNYFFLFNKVKIY 317 Query: 99 RLDDRSNYLYIYK 61 + NYL YK Sbjct: 318 FIGLFKNYLNKYK 330
>CYB_ARTJA (Q95738) Cytochrome b| Length = 379 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = +1 Query: 133 FLFLPPFQETALIPAKTHKLYTTETNSKEH*GNENSKSFARLHPH 267 F FLPPF TAL+ H L+ ET S G + HP+ Sbjct: 181 FHFLPPFIVTALV--MVHLLFLHETGSNNPTGIPSDPDMIHSHPY 223
>CYB_ARTTL (Q95750) Cytochrome b| Length = 379 Score = 28.9 bits (63), Expect = 5.9 Identities = 21/65 (32%), Positives = 29/65 (44%) Frame = +1 Query: 133 FLFLPPFQETALIPAKTHKLYTTETNSKEH*GNENSKSFARLHPHGQLHITNEGMTMMSR 312 F FL PF TAL+ H L+ ET S G + LHP+ + + M++ Sbjct: 181 FHFLLPFIVTALV--MVHLLFLHETGSNNPTGFPSDPDMIPLHPYYTIKDILGFLVMLTA 238 Query: 313 SFPLV 327 PLV Sbjct: 239 LAPLV 243
>ATS19_MOUSE (P59509) ADAMTS-19 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 19) (ADAM-TS 19) (ADAM-TS19) Length = 1210 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +1 Query: 130 NFLFLPPFQETALIPAKTHKLYTTETNSKE 219 +FLF+ PF +T I H+LY + +++E Sbjct: 255 DFLFIEPFNDTMAIIGHPHRLYRQKRSTEE 284 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,019,384 Number of Sequences: 219361 Number of extensions: 1056657 Number of successful extensions: 2477 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2429 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2476 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)