ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18n14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC140197.4| Mus musculus BAC clone RP23-253A22 from chromosom... 44 0.38
2gb|AC027279.4| Homo sapiens chromosome 16 clone RP11-319G9, comp... 44 0.38
3gb|AC009145.4|AC009145 Homo sapiens chromosome 16 clone RP11-556... 44 0.38
4gb|AC149599.3| Mus musculus BAC clone RP23-193A3 from 18, comple... 44 0.38
5gb|AC134592.5| Mus musculus BAC clone RP23-381O3 from chromosome... 42 1.5
6gb|AC117616.8| Mus musculus chromosome 9, clone RP23-111P13, com... 42 1.5
7gb|AC155324.4| Mus musculus 10 BAC RP24-143N7 (Roswell Park Canc... 42 1.5
8gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Canc... 40 6.0
9gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, comp... 40 6.0
10gb|AC093198.3| Drosophila melanogaster clone BACR03G24, complete... 40 6.0
11gb|AC099025.2| Drosophila melanogaster clone BACR04O19, complete... 40 6.0
12gb|AC006402.12| Drosophila melanogaster clone BACR08D17, complet... 40 6.0
13gb|AC186551.1| Pan troglodytes chromosome 7 clone CH251-720G4, c... 40 6.0
14gb|BC070464.1| Mus musculus RIKEN cDNA 4921537D05 gene, mRNA (cD... 40 6.0
15gb|AC123654.9| Mus musculus chromosome 15, clone RP23-161D16, co... 40 6.0
16ref|NM_029852.1| Mus musculus RIKEN cDNA 4921537D05 gene (492153... 40 6.0
17gb|AC124226.12| Mus musculus chromosome 15, clone RP23-94G21, co... 40 6.0
18ref|XM_001003243.1| PREDICTED: Mus musculus RIKEN cDNA 4921537D0... 40 6.0
19ref|XM_001003229.1| PREDICTED: Mus musculus RIKEN cDNA 4921537D0... 40 6.0
20gb|AC116119.12| Mus musculus chromosome 12, clone RP23-76D19, co... 40 6.0
21emb|CR388416.6| Zebrafish DNA sequence from clone DKEY-165B20 in... 40 6.0
22gb|AY223438.1| Schistosoma japonicum clone ZZZ439 mRNA sequence 40 6.0
23gb|AC004485.2| Homo sapiens BAC clone CTB-118E13 from 7, complet... 40 6.0
24gb|AC109240.30| Mus musculus chromosome 1, clone RP23-445I23, co... 40 6.0
25gb|AC147877.10| Medicago truncatula clone mth2-9b13, complete se... 40 6.0
26gb|AC139526.22| Medicago truncatula clone mth2-9b23, complete se... 40 6.0
27emb|AL772284.5| Human DNA sequence from clone RP13-347D8 on chro... 40 6.0
28emb|AL590427.15| Human DNA sequence from clone RP11-396N10 on ch... 40 6.0
29gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7... 40 6.0
30emb|BX324210.12| Zebrafish DNA sequence from clone DKEY-20I20 in... 40 6.0
31emb|CR354432.6| Zebrafish DNA sequence from clone CH211-66E2 in ... 40 6.0
32gb|AF411807.1| Lycopersicon esculentum BAC clone Clemson_Id 127E... 40 6.0
33gb|AC091078.7| Homo sapiens, clone RP11-164C12, complete sequence 40 6.0
34gb|AC107877.4| Homo sapiens chromosome 8, clone RP11-74P9, compl... 40 6.0
35dbj|AK152801.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 6.0
36dbj|AK153515.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 6.0
37dbj|AK152465.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 6.0
38ref|XM_939565.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 6.0
39ref|XM_928538.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 6.0
40dbj|AK151291.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 6.0
41gb|AC022929.6| Homo sapiens, clone RP11-326N17, complete sequence 40 6.0
42gb|AC113815.6| Rattus norvegicus BAC CH230-221C20 (Children's H... 40 6.0
43gb|AC159542.8| Mus musculus 10 BAC RP23-137B10 (Roswell Park Can... 40 6.0
44gb|AC009724.9| Homo sapiens, clone RP11-45N10, complete sequence 40 6.0
45gb|AC027016.4|AC027016 Homo sapiens chromosome 11, clone RP11-43... 40 6.0
46gb|AC020915.6|AC020915 Homo sapiens chromosome 19 clone CTD-3138... 40 6.0
47ref|NM_064947.3| Caenorhabditis elegans Y119D3B.12a (Y119D3B.12)... 40 6.0
48ref|NM_181939.2| Caenorhabditis elegans Y119D3B.12b (Y119D3B.12)... 40 6.0
49dbj|AK015007.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.0
50dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
51gb|AC007755.6|AC007755 Drosophila melanogaster, chromosome 3R, r... 40 6.0
52gb|AC007726.7|AC007726 Drosophila melanogaster, chromosome 3R, r... 40 6.0
53gb|AC156792.2| Mus musculus BAC clone RP24-160P13 from chromosom... 40 6.0
54emb|AL935065.7| Zebrafish DNA sequence from clone CH211-69I14 in... 40 6.0
55gb|AC026736.4|AC026736 Homo sapiens chromosome 5 clone CTD-2350M... 40 6.0
56gb|BC081969.1| Rattus norvegicus similar to RIKEN cDNA 4921537D0... 40 6.0
57dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
58dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
59emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on ch... 40 6.0
60dbj|AK130778.1| Homo sapiens cDNA FLJ27268 fis, clone TMS00396 40 6.0
61gb|AC147906.2| Xenopus tropicalis clone CH216-71H3, complete seq... 40 6.0
62emb|Z83230.1|CEF56A8 Caenorhabditis elegans Cosmid F56A8, comple... 40 6.0
63gb|AE003711.3| Drosophila melanogaster chromosome 3R, section 49... 40 6.0
64gb|AE003666.6| Drosophila melanogaster chromosome 2L, section 75... 40 6.0
65gb|AE003808.4| Drosophila melanogaster chromosome 2R, section 42... 40 6.0
66dbj|AP001793.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.0
67gb|AC151531.3| Mus musculus BAC clone RP24-387D22 from chromosom... 40 6.0
68dbj|AP004710.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.0
69dbj|AP005364.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.0
70ref|NM_001014266.1| Rattus norvegicus similar to RIKEN cDNA 4921... 40 6.0
71gb|BC028960.1| Mus musculus cDNA clone IMAGE:5364255, containing... 40 6.0
72gb|AC004516.1|AC004516 Drosophila melanogaster DNA sequence (P1 ... 40 6.0
73gb|AC145910.2| Gallus gallus BAC clone CH261-44O1 from chromosom... 40 6.0
74emb|AL929179.6| Mouse DNA sequence from clone RP23-428M4 on chro... 40 6.0
75emb|AL928901.8| Zebrafish DNA sequence from clone CH211-155M12 i... 40 6.0
76dbj|AP000864.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.0
77gb|AC006714.3| Caenorhabditis elegans cosmid Y119D3B, complete s... 40 6.0
78emb|AL672270.12| Mouse DNA sequence from clone RP23-351A10 on ch... 40 6.0
79gb|AC160635.2| Mus musculus BAC clone RP23-396N20 from chromosom... 40 6.0
80gb|AC166160.3| Mus musculus BAC clone RP24-86O19 from chromosome... 40 6.0 
>gb|AC140197.4| Mus musculus BAC clone RP23-253A22 from chromosome 18, complete
             sequence
          Length = 192563

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 34    aaaaccaaaacagtttccctgt 55
             ||||||||||||||||||||||
Sbjct: 96727 aaaaccaaaacagtttccctgt 96706
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>gb|AC027279.4| Homo sapiens chromosome 16 clone RP11-319G9, complete sequence
          Length = 194594

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1     attttcttaaacagctgaatcttttg 26
             ||||||||||||||||| ||||||||
Sbjct: 21857 attttcttaaacagctgcatcttttg 21832
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>gb|AC009145.4|AC009145 Homo sapiens chromosome 16 clone RP11-556H2, complete sequence
          Length = 182302

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 1      attttcttaaacagctgaatcttttg 26
              ||||||||||||||||| ||||||||
Sbjct: 155961 attttcttaaacagctgcatcttttg 155936
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>gb|AC149599.3| Mus musculus BAC clone RP23-193A3 from 18, complete sequence
          Length = 208349

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 34    aaaaccaaaacagtttccctgt 55
             ||||||||||||||||||||||
Sbjct: 32948 aaaaccaaaacagtttccctgt 32927
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>gb|AC134592.5| Mus musculus BAC clone RP23-381O3 from chromosome 9, complete sequence
          Length = 184917

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 57     gcattttgtatatatacaaataatt 81
              ||||||||| |||||||||||||||
Sbjct: 131705 gcattttgtttatatacaaataatt 131729
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>gb|AC117616.8| Mus musculus chromosome 9, clone RP23-111P13, complete sequence
          Length = 242288

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 57     gcattttgtatatatacaaataatt 81
              ||||||||| |||||||||||||||
Sbjct: 167988 gcattttgtttatatacaaataatt 168012
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>gb|AC155324.4| Mus musculus 10 BAC RP24-143N7 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 179677

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 59    attttgtatatatacaaataa 79
             |||||||||||||||||||||
Sbjct: 64231 attttgtatatatacaaataa 64211
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>gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 224115

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    tttcctttttctccctccat 151
              ||||||||||||||||||||
Sbjct: 109408 tttcctttttctccctccat 109389
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>gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, complete sequence
          Length = 218755

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 118    ccacaaataacaaatttccttttt 141
              |||||||||||||||||| |||||
Sbjct: 134742 ccacaaataacaaatttcattttt 134765
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>gb|AC093198.3| Drosophila melanogaster clone BACR03G24, complete sequence
          Length = 182901

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cattttgtatatatacaaat 77
              ||||||||||||||||||||
Sbjct: 113920 cattttgtatatatacaaat 113939
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>gb|AC099025.2| Drosophila melanogaster clone BACR04O19, complete sequence
          Length = 160827

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    aaaaccaaaacagtttccct 53
             ||||||||||||||||||||
Sbjct: 45105 aaaaccaaaacagtttccct 45086
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>gb|AC006402.12| Drosophila melanogaster clone BACR08D17, complete sequence
          Length = 174735

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    cattttgtatatatacaaat 77
             ||||||||||||||||||||
Sbjct: 52630 cattttgtatatatacaaat 52649
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>gb|AC186551.1| Pan troglodytes chromosome 7 clone CH251-720G4, complete sequence
          Length = 173362

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    aaaacccataaactgtatac 197
              ||||||||||||||||||||
Sbjct: 115259 aaaacccataaactgtatac 115240
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>gb|BC070464.1| Mus musculus RIKEN cDNA 4921537D05 gene, mRNA (cDNA clone MGC:96625
            IMAGE:30608497), complete cds
          Length = 3006

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcttttgacaatgcaaaa 37
            ||||||||||||||||||||
Sbjct: 2656 aatcttttgacaatgcaaaa 2675
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>gb|AC123654.9| Mus musculus chromosome 15, clone RP23-161D16, complete sequence
          Length = 182376

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 59    attttgtatatatacaaataattt 82
             |||||||||||||| |||||||||
Sbjct: 16170 attttgtatatataaaaataattt 16147
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>ref|NM_029852.1| Mus musculus RIKEN cDNA 4921537D05 gene (4921537D05Rik), mRNA
          Length = 2832

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcttttgacaatgcaaaa 37
            ||||||||||||||||||||
Sbjct: 2793 aatcttttgacaatgcaaaa 2812
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>gb|AC124226.12| Mus musculus chromosome 15, clone RP23-94G21, complete sequence
          Length = 189787

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 59     attttgtatatatacaaataattt 82
              |||||||||||||| |||||||||
Sbjct: 156576 attttgtatatataaaaataattt 156553
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>ref|XM_001003243.1| PREDICTED: Mus musculus RIKEN cDNA 4921537D05 gene, transcript
            variant 5 (4921537D05Rik), mRNA
          Length = 2164

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcttttgacaatgcaaaa 37
            ||||||||||||||||||||
Sbjct: 1831 aatcttttgacaatgcaaaa 1850
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>ref|XM_001003229.1| PREDICTED: Mus musculus RIKEN cDNA 4921537D05 gene, transcript
            variant 2 (4921537D05Rik), mRNA
          Length = 3111

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcttttgacaatgcaaaa 37
            ||||||||||||||||||||
Sbjct: 2778 aatcttttgacaatgcaaaa 2797
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>gb|AC116119.12| Mus musculus chromosome 12, clone RP23-76D19, complete sequence
          Length = 264410

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tgcattttgtatatatacaa 75
             ||||||||||||||||||||
Sbjct: 24426 tgcattttgtatatatacaa 24445
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>emb|CR388416.6| Zebrafish DNA sequence from clone DKEY-165B20 in linkage group 14,
             complete sequence
          Length = 207245

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   caatgaaaactctaaatctt 247
             ||||||||||||||||||||
Sbjct: 19904 caatgaaaactctaaatctt 19923
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>gb|AY223438.1| Schistosoma japonicum clone ZZZ439 mRNA sequence
          Length = 1337

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 58   cattttgtatatatacaaataatt 81
            |||| |||||||||||||||||||
Sbjct: 1274 cattatgtatatatacaaataatt 1251
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>gb|AC004485.2| Homo sapiens BAC clone CTB-118E13 from 7, complete sequence
          Length = 185516

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     tatatatacaaataatttga 84
              ||||||||||||||||||||
Sbjct: 160350 tatatatacaaataatttga 160369
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>gb|AC109240.30| Mus musculus chromosome 1, clone RP23-445I23, complete sequence
          Length = 189545

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 118  ccacaaataacaaatttccttttt 141
            |||||||||||||||||| |||||
Sbjct: 3460 ccacaaataacaaatttcattttt 3437
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>gb|AC147877.10| Medicago truncatula clone mth2-9b13, complete sequence
          Length = 122251

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   ttcctttttctccctccatt 152
             ||||||||||||||||||||
Sbjct: 79531 ttcctttttctccctccatt 79550
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>gb|AC139526.22| Medicago truncatula clone mth2-9b23, complete sequence
          Length = 141491

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   ttcctttttctccctccatt 152
             ||||||||||||||||||||
Sbjct: 13807 ttcctttttctccctccatt 13826
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>emb|AL772284.5| Human DNA sequence from clone RP13-347D8 on chromosome X Contains a
              pseudogene similar to part of KIAA0633 protein (COBL), the
              RNF127 gene for ring finger protein 127 (FLJ40322,
              FLJ34458, FLJ22612), gene KIAA1210 and three CpG islands,
              complete sequence
          Length = 186148

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    tttctccctccatttcagga 158
              ||||||||||||||||||||
Sbjct: 181840 tttctccctccatttcagga 181821
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>emb|AL590427.15| Human DNA sequence from clone RP11-396N10 on chromosome 1 Contains
            the 5' end of the NTNG1 gene for netrin G1 and a CpG
            island, complete sequence
          Length = 160135

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  gaggcaatgaaaactctaaa 243
            ||||||||||||||||||||
Sbjct: 5542 gaggcaatgaaaactctaaa 5561
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>gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete
              sequence
          Length = 253924

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     tttgtatatatacaaataat 80
              ||||||||||||||||||||
Sbjct: 111197 tttgtatatatacaaataat 111216
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>emb|BX324210.12| Zebrafish DNA sequence from clone DKEY-20I20 in linkage group 22,
             complete sequence
          Length = 230738

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     tttcttaaacagctgaatct 22
             ||||||||||||||||||||
Sbjct: 62794 tttcttaaacagctgaatct 62813
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>emb|CR354432.6| Zebrafish DNA sequence from clone CH211-66E2 in linkage group 3,
             complete sequence
          Length = 193960

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    ttttgtatatatacaaataa 79
             ||||||||||||||||||||
Sbjct: 40838 ttttgtatatatacaaataa 40819
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>gb|AF411807.1| Lycopersicon esculentum BAC clone Clemson_Id 127E11, complete sequence
          Length = 95845

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    attttgtatatatacaaata 78
             ||||||||||||||||||||
Sbjct: 91938 attttgtatatatacaaata 91919
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>gb|AC091078.7| Homo sapiens, clone RP11-164C12, complete sequence
          Length = 182776

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 33    caaaaccaaaacagtttccctgttgcat 60
             ||||||||||| ||||||||| ||||||
Sbjct: 93182 caaaaccaaaaaagtttcccttttgcat 93155
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>gb|AC107877.4| Homo sapiens chromosome 8, clone RP11-74P9, complete sequence
          Length = 181925

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     ttttgtatatatacaaataa 79
              ||||||||||||||||||||
Sbjct: 129974 ttttgtatatatacaaataa 129993
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>dbj|AK152801.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830086H19 product:Adult male testis cDNA,
            RIKEN full-length enriched library, clone:4921537D05
            product:NY-REN-58 antigen homolog [Mus musculus], full
            insert sequence
          Length = 1692

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcttttgacaatgcaaaa 37
            ||||||||||||||||||||
Sbjct: 1505 aatcttttgacaatgcaaaa 1524
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>dbj|AK153515.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830169I16 product:NY-REN-58 antigen
            homolog [Homo sapiens], full insert sequence
          Length = 1692

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcttttgacaatgcaaaa 37
            ||||||||||||||||||||
Sbjct: 1505 aatcttttgacaatgcaaaa 1524
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>dbj|AK152465.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830073M03 product:NY-REN-58 antigen
            homolog [Homo sapiens], full insert sequence
          Length = 1692

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcttttgacaatgcaaaa 37
            ||||||||||||||||||||
Sbjct: 1505 aatcttttgacaatgcaaaa 1524
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>ref|XM_939565.1| PREDICTED: Homo sapiens hypothetical protein LOC648469 (LOC648469),
            mRNA
          Length = 2415

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   ttttgtatatatacaaataa 79
            ||||||||||||||||||||
Sbjct: 2158 ttttgtatatatacaaataa 2177
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>ref|XM_928538.1| PREDICTED: Homo sapiens hypothetical protein LOC643608 (LOC643608),
            mRNA
          Length = 2415

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   ttttgtatatatacaaataa 79
            ||||||||||||||||||||
Sbjct: 2158 ttttgtatatatacaaataa 2177
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>dbj|AK151291.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830027M01 product:NY-REN-58 antigen
            homolog [Homo sapiens], full insert sequence
          Length = 1692

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcttttgacaatgcaaaa 37
            ||||||||||||||||||||
Sbjct: 1505 aatcttttgacaatgcaaaa 1524
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>gb|AC022929.6| Homo sapiens, clone RP11-326N17, complete sequence
          Length = 165328

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    tttgtatatatacaaataat 80
             ||||||||||||||||||||
Sbjct: 55592 tttgtatatatacaaataat 55611



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    tttgtatatatacaaataat 80
             ||||||||||||||||||||
Sbjct: 55607 tttgtatatatacaaataat 55588
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>gb|AC113815.6| Rattus norvegicus  BAC CH230-221C20 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 229621

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    atacaacagaaaccaacagc 213
              ||||||||||||||||||||
Sbjct: 121007 atacaacagaaaccaacagc 121026
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>gb|AC159542.8| Mus musculus 10 BAC RP23-137B10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 198525

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     aatcttttgacaatgcaaaa 37
              ||||||||||||||||||||
Sbjct: 120522 aatcttttgacaatgcaaaa 120541
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>gb|AC009724.9| Homo sapiens, clone RP11-45N10, complete sequence
          Length = 155630

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     tttgtatatatacaaataat 80
              ||||||||||||||||||||
Sbjct: 124196 tttgtatatatacaaataat 124215



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     tttgtatatatacaaataat 80
              ||||||||||||||||||||
Sbjct: 124211 tttgtatatatacaaataat 124192
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>gb|AC027016.4|AC027016 Homo sapiens chromosome 11, clone RP11-439M19, complete sequence
          Length = 165843

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    tttgtatatatacaaataat 80
             ||||||||||||||||||||
Sbjct: 67869 tttgtatatatacaaataat 67888
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>gb|AC020915.6|AC020915 Homo sapiens chromosome 19 clone CTD-3138B18, complete sequence
          Length = 160852

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    aacagcaaagagcactgagg 227
              ||||||||||||||||||||
Sbjct: 138726 aacagcaaagagcactgagg 138707
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>ref|NM_064947.3| Caenorhabditis elegans Y119D3B.12a (Y119D3B.12) mRNA, complete cds
          Length = 1346

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 atttcctttttctccctcca 150
           ||||||||||||||||||||
Sbjct: 465 atttcctttttctccctcca 446
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>ref|NM_181939.2| Caenorhabditis elegans Y119D3B.12b (Y119D3B.12) mRNA, complete cds
          Length = 783

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 atttcctttttctccctcca 150
           ||||||||||||||||||||
Sbjct: 470 atttcctttttctccctcca 451
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>dbj|AK015007.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4921537D05 product:NY-REN-58 ANTIGEN
            homolog [Homo sapiens], full insert sequence
          Length = 2832

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcttttgacaatgcaaaa 37
            ||||||||||||||||||||
Sbjct: 2793 aatcttttgacaatgcaaaa 2812
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 59       attttgtatatatacaaata 78
                ||||||||||||||||||||
Sbjct: 12699898 attttgtatatatacaaata 12699917
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>gb|AC007755.6|AC007755 Drosophila melanogaster, chromosome 3R, region 89A-89B, BAC clone
            BACR04C07, complete sequence
          Length = 173660

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 53   tgttgcattttgtatatatacaaataat 80
            ||||| ||||||||||||| ||||||||
Sbjct: 3722 tgttgtattttgtatatatccaaataat 3749
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>gb|AC007726.7|AC007726 Drosophila melanogaster, chromosome 3R, region 89B-89B, BAC clone
             BACR05C20, complete sequence
          Length = 177278

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 53    tgttgcattttgtatatatacaaataat 80
             ||||| ||||||||||||| ||||||||
Sbjct: 78011 tgttgtattttgtatatatccaaataat 77984
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>gb|AC156792.2| Mus musculus BAC clone RP24-160P13 from chromosome 12, complete sequence
          Length = 187170

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     tgcattttgtatatatacaa 75
              ||||||||||||||||||||
Sbjct: 169525 tgcattttgtatatatacaa 169544
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>emb|AL935065.7| Zebrafish DNA sequence from clone CH211-69I14 in linkage group 5,
             complete sequence
          Length = 167740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 60    ttttgtatatatacaaataatttg 83
             |||||||| |||||||||||||||
Sbjct: 91991 ttttgtatgtatacaaataatttg 91968
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>gb|AC026736.4|AC026736 Homo sapiens chromosome 5 clone CTD-2350M8, complete sequence
          Length = 108661

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     tttcttaaacagctgaatct 22
             ||||||||||||||||||||
Sbjct: 86871 tttcttaaacagctgaatct 86890
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>gb|BC081969.1| Rattus norvegicus similar to RIKEN cDNA 4921537D05, mRNA (cDNA clone
            MGC:94102 IMAGE:7125504), complete cds
          Length = 2711

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcttttgacaatgcaaaa 37
            ||||||||||||||||||||
Sbjct: 2355 aatcttttgacaatgcaaaa 2374
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>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0041C07
          Length = 179047

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     attttgtatatatacaaata 78
              ||||||||||||||||||||
Sbjct: 165836 attttgtatatatacaaata 165855
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>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0027G10
          Length = 184759

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   attttgtatatatacaaata 78
            ||||||||||||||||||||
Sbjct: 7675 attttgtatatatacaaata 7694
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>emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on chromosome X, complete
             sequence
          Length = 226471

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   atttcctttttctccctcca 150
             ||||||||||||||||||||
Sbjct: 24758 atttcctttttctccctcca 24777
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>dbj|AK130778.1| Homo sapiens cDNA FLJ27268 fis, clone TMS00396
          Length = 2199

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   ttttgtatatatacaaataa 79
            ||||||||||||||||||||
Sbjct: 2163 ttttgtatatatacaaataa 2182
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>gb|AC147906.2| Xenopus tropicalis clone CH216-71H3, complete sequence
          Length = 147503

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 53     tgttgcattttgtatatatacaaa 76
              ||||||| ||||||||||||||||
Sbjct: 138411 tgttgcactttgtatatatacaaa 138388
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>emb|Z83230.1|CEF56A8 Caenorhabditis elegans Cosmid F56A8, complete sequence
          Length = 40279

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   tcctttttctccctccattt 153
             ||||||||||||||||||||
Sbjct: 24334 tcctttttctccctccattt 24353
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>gb|AE003711.3| Drosophila melanogaster chromosome 3R, section 49 of 118 of the complete
              sequence
          Length = 236475

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 53     tgttgcattttgtatatatacaaataat 80
              ||||| ||||||||||||| ||||||||
Sbjct: 169485 tgttgtattttgtatatatccaaataat 169458
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>gb|AE003666.6| Drosophila melanogaster chromosome 2L, section 75 of 83 of the complete
              sequence
          Length = 318277

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cattttgtatatatacaaat 77
              ||||||||||||||||||||
Sbjct: 259647 cattttgtatatatacaaat 259666
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>gb|AE003808.4| Drosophila melanogaster chromosome 2R, section 42 of 73 of the complete
             sequence
          Length = 260367

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    aaaaccaaaacagtttccct 53
             ||||||||||||||||||||
Sbjct: 71360 aaaaccaaaacagtttccct 71341
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>dbj|AP001793.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-661O13, complete
              sequence
          Length = 195743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    tttttctccctccatttcag 156
              ||||||||||||||||||||
Sbjct: 176651 tttttctccctccatttcag 176632
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>gb|AC151531.3| Mus musculus BAC clone RP24-387D22 from chromosome 7, complete sequence
          Length = 213801

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    caaaacagtttccctgttgc 58
             ||||||||||||||||||||
Sbjct: 14893 caaaacagtttccctgttgc 14874
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>dbj|AP004710.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1429D6, complete
            sequence
          Length = 179115

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   ttttgtatatatacaaataa 79
            ||||||||||||||||||||
Sbjct: 3353 ttttgtatatatacaaataa 3372
to top
>dbj|AP005364.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1970D8, complete
              sequence
          Length = 168850

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     ttttgtatatatacaaataa 79
              ||||||||||||||||||||
Sbjct: 151580 ttttgtatatatacaaataa 151599
to top
>ref|NM_001014266.1| Rattus norvegicus similar to RIKEN cDNA 4921537D05 (RGD1359593), mRNA
          Length = 2711

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcttttgacaatgcaaaa 37
            ||||||||||||||||||||
Sbjct: 2355 aatcttttgacaatgcaaaa 2374
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>gb|BC028960.1| Mus musculus cDNA clone IMAGE:5364255, containing frame-shift errors
          Length = 2417

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcttttgacaatgcaaaa 37
            ||||||||||||||||||||
Sbjct: 2356 aatcttttgacaatgcaaaa 2375
to top
>gb|AC004516.1|AC004516 Drosophila melanogaster DNA sequence (P1 DS08018 (D164)), complete
            sequence
          Length = 68727

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   aaaaccaaaacagtttccct 53
            ||||||||||||||||||||
Sbjct: 3988 aaaaccaaaacagtttccct 4007
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>gb|AC145910.2| Gallus gallus BAC clone CH261-44O1 from chromosome unknown, complete
            sequence
          Length = 213878

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    ttaaacagctgaatcttttg 26
            ||||||||||||||||||||
Sbjct: 8867 ttaaacagctgaatcttttg 8886
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>emb|AL929179.6| Mouse DNA sequence from clone RP23-428M4 on chromosome 2, complete
              sequence
          Length = 117995

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     aatcttttgacaatgcaaaa 37
              ||||||||||||||||||||
Sbjct: 103817 aatcttttgacaatgcaaaa 103836
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>emb|AL928901.8| Zebrafish DNA sequence from clone CH211-155M12 in linkage group 5,
             complete sequence
          Length = 145957

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    ttgcattttgtatatataca 74
             ||||||||||||||||||||
Sbjct: 39009 ttgcattttgtatatataca 39028
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>dbj|AP000864.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-674N23, complete
            sequence
          Length = 171200

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  tttttctccctccatttcag 156
            ||||||||||||||||||||
Sbjct: 3207 tttttctccctccatttcag 3188
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>gb|AC006714.3| Caenorhabditis elegans cosmid Y119D3B, complete sequence
          Length = 87780

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   atttcctttttctccctcca 150
             ||||||||||||||||||||
Sbjct: 25470 atttcctttttctccctcca 25451
to top
>emb|AL672270.12| Mouse DNA sequence from clone RP23-351A10 on chromosome X, complete
              sequence
          Length = 220691

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     aaaaccaaaacagtttccct 53
              ||||||||||||||||||||
Sbjct: 146709 aaaaccaaaacagtttccct 146728
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>gb|AC160635.2| Mus musculus BAC clone RP23-396N20 from chromosome 9, complete sequence
          Length = 207088

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    atttcctttttctccctcca 150
              ||||||||||||||||||||
Sbjct: 111312 atttcctttttctccctcca 111331
to top
>gb|AC166160.3| Mus musculus BAC clone RP24-86O19 from chromosome 7, complete sequence
          Length = 221792

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     caaaacagtttccctgttgc 58
              ||||||||||||||||||||
Sbjct: 124863 caaaacagtttccctgttgc 124844


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,165,382
Number of Sequences: 3902068
Number of extensions: 5165382
Number of successful extensions: 119044
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118798
Number of HSP's gapped (non-prelim): 246
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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