Clone Information

BLAST Search Result

Clone Name	rbasd19c13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	KING1_ARATH (Q8LBB2) SNF1-related protein kinase regulatory gamm...	155	7e-38
2	IMDH_METJA (Q59011) Inosine-5'-monophosphate dehydrogenase (EC 1...	40	0.006
3	SNF4_YEAST (P12904) Nuclear protein SNF4 (Regulatory protein CAT3)	38	0.016
4	CORC_PASMU (Q9CM13) Magnesium and cobalt efflux protein corC	37	0.047
5	SNF4_KLULA (Q9P869) Nuclear protein SNF4	37	0.047
6	CORC_HAEIN (Q57368) Magnesium and cobalt efflux protein corC	35	0.14
7	YL28_SCHPO (Q10343) Hypothetical protein C1556.08c in chromosome I	35	0.14
8	IMDH_AQUAE (O67820) Inosine-5'-monophosphate dehydrogenase (EC 1...	35	0.18
9	YUGS_BACSU (O05241) Hypothetical UPF0053 protein yugS	33	0.52
10	YRKA_BACSU (P54428) Hypothetical UPF0053 protein yrkA	33	0.52
11	AAKG2_MOUSE (Q91WG5) 5'-AMP-activated protein kinase, gamma-2 su...	33	0.52
12	AAKG2_HUMAN (Q9UGJ0) 5'-AMP-activated protein kinase, gamma-2 su...	33	0.67
13	AAKG1_HUMAN (P54619) 5'-AMP-activated protein kinase, gamma-1 su...	32	0.88
14	AAKG1_PIG (Q09138) 5'-AMP-activated protein kinase, gamma-1 subu...	32	0.88
15	AAKG1_BOVIN (P58108) 5'-AMP-activated protein kinase, gamma-1 su...	32	0.88
16	AAKG1_RAT (P80385) 5'-AMP-activated protein kinase, gamma-1 subu...	32	1.1
17	AAKG1_MOUSE (O54950) 5'-AMP-activated protein kinase, gamma-1 su...	32	1.1
18	Y1426_METJA (Q58821) Hypothetical protein MJ1426	32	1.1
19	YHDP_BACSU (O07585) Hypothetical UPF0053 protein yhdP	31	2.0
20	AAKG3_MOUSE (Q8BGM7) 5'-AMP-activated protein kinase, gamma-3 su...	31	2.0
21	AAKG3_HUMAN (Q9UGI9) 5'-AMP-activated protein kinase, gamma-3 su...	31	2.0
22	AAKG2_PONPY (Q5R4S0) 5'-AMP-activated protein kinase, gamma-2 su...	31	2.0
23	AAKG3_PIG (Q9MYP4) 5'-AMP-activated protein kinase, gamma-3 subu...	31	2.6
24	Y107_HAEIN (Q57017) Hypothetical UPF0053 protein HI0107	31	2.6
25	YHDT_BACSU (O07589) Hypothetical UPF0053 protein yhdT	31	2.6
26	IMDH_HELPY (P56088) Inosine-5'-monophosphate dehydrogenase (EC 1...	31	2.6
27	IMDH_HELPJ (Q9ZL14) Inosine-5'-monophosphate dehydrogenase (EC 1...	31	2.6
28	Y1842_MYCTU (Q50592) Hypothetical UPF0053 protein Rv1842c/MT1890	30	3.3
29	IMDH_BACHD (Q9KGN8) Inosine-5'-monophosphate dehydrogenase (EC 1...	30	3.3
30	DSRAD_MOUSE (Q99MU3) Double-stranded RNA-specific adenosine deam...	30	4.4
31	IMDH_CHLVI (O50316) Inosine-5'-monophosphate dehydrogenase (EC 1...	30	4.4
32	Y740_RICPR (O05961) Hypothetical UPF0053 protein RP740	30	4.4
33	MVL_DROME (P49283) Protein Malvolio	30	4.4
34	IMDH_PYRHO (O58045) Inosine-5'-monophosphate dehydrogenase (EC 1...	30	4.4
35	Y1404_METJA (Q58799) Hypothetical protein MJ1404	30	4.4
36	CORC_SHIFL (P0AE81) Magnesium and cobalt efflux protein corC	30	4.4
37	CORC_ECOLI (P0AE78) Magnesium and cobalt efflux protein corC	30	4.4
38	CORC_ECOL6 (P0AE79) Magnesium and cobalt efflux protein corC	30	4.4
39	CORC_ECO57 (P0AE80) Magnesium and cobalt efflux protein corC	30	4.4
40	IMDH_CHLTE (Q8KCW4) Inosine-5'-monophosphate dehydrogenase (EC 1...	30	5.7
41	CORC_VIBCH (Q9KTE3) Magnesium and cobalt efflux protein corC	30	5.7
42	CORC_SALTY (P0A2L3) Magnesium and cobalt efflux protein corC	30	5.7
43	CORC_SALTI (P0A2L4) Magnesium and cobalt efflux protein corC	30	5.7
44	Y1254_SYNY3 (P74078) Hypothetical UPF0053 protein sll1254	29	9.7
45	CORC_BUCAP (Q8K9C0) Magnesium and cobalt efflux protein corC	29	9.7
46	YC19_KLEPN (Q48445) Hypothetical UPF0053 protein in cps region (...	29	9.7

>KING1_ARATH (Q8LBB2) SNF1-related protein kinase regulatory gamma subunit 1|
           (AKIN gamma1) (AKING1)
          Length = 424

 Score =  155 bits (392), Expect = 7e-38
 Identities = 76/138 (55%), Positives = 101/138 (73%), Gaps = 1/138 (0%)
 Frame = -1

Query: 544 KGVGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEA 365
           K +GG+PV++ N  K +GNIS+RDVQ+LL+AP+IY  YR+I+ K+FL +VR HL++  + 
Sbjct: 287 KRIGGIPVIERNSEKPVGNISLRDVQFLLTAPEIYHDYRSITTKNFLVSVREHLEKCGDT 346

Query: 364 S-PLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLVHEPRH 188
           S P++  VI C +           D+ KIHRIYVVDD G+ EG+ITLRDII++LVHEP  
Sbjct: 347 SAPIMSGVIACTKNHTLKELILMLDAEKIHRIYVVDDFGNLEGLITLRDIIARLVHEPSG 406

Query: 187 YFGDFFDGVVPLPANSTV 134
           YFGDFFDGV+PLP N  V
Sbjct: 407 YFGDFFDGVMPLPENYRV 424

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>IMDH_METJA (Q59011) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 496

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 29/110 (26%), Positives = 49/110 (44%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           + G+PV+D N  K +G I+ RDV+ +        + +T   KD +T              
Sbjct: 121 ISGLPVVD-NEDKLVGIITHRDVKAI--------EDKTKKVKDVMTK------------- 158

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISK 209
              DV+  K             + ++ R+ +VDD+    G+ITLRDI+ +
Sbjct: 159 ---DVVCAKEDVEEEEALELMYANRVERLPIVDDENRLIGIITLRDILKR 205

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>SNF4_YEAST (P12904) Nuclear protein SNF4 (Regulatory protein CAT3)|
          Length = 322

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 3/115 (2%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISA---KDFLTAVRHHLQEQHE 368
           V  VP++D NG             YL++  + Y     I      D   +V   L  + +
Sbjct: 220 VSSVPIIDENG-------------YLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSD 266

Query: 367 ASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLV 203
                  V TC +              ++HR +VVDD G   GV+TL DI+  ++
Sbjct: 267 D---FEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 318

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>CORC_PASMU (Q9CM13) Magnesium and cobalt efflux protein corC|
          Length = 300

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 21/83 (25%), Positives = 37/83 (44%)
 Frame = -1

Query: 424 ISAKDFLTAVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDT 245
           + AKD L  +R + +E  +  PLL   +                S + H   VVD+ G  
Sbjct: 119 LHAKDLLRFLRSNAEE-FDLMPLLRPAVIVPESKRVDRMLKDFRSERFHMAIVVDEFGAV 177

Query: 244 EGVITLRDIISKLVHEPRHYFGD 176
            G++T+ DI+ ++V +    F +
Sbjct: 178 SGLVTIEDILEQIVGDIEDEFDE 200

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>SNF4_KLULA (Q9P869) Nuclear protein SNF4|
          Length = 328

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 30/113 (26%), Positives = 45/113 (39%)
 Frame = -1

Query: 541 GVGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEAS 362
           GV  VP++D  G K +      DV  L+    IY         D   +V   L  + +  
Sbjct: 225 GVSSVPIVDEQG-KLVNVYEAVDVLGLIKGG-IYN--------DLSLSVGEALMRRSDD- 273

Query: 361 PLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLV 203
                V TC               +++HR +VVD  G   GV+TL DI+  ++
Sbjct: 274 --FEGVFTCTENDKLSSILDTVRKSRVHRFFVVDSNGFLTGVLTLSDILKYIL 324

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>CORC_HAEIN (Q57368) Magnesium and cobalt efflux protein corC|
          Length = 299

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 22/83 (26%), Positives = 36/83 (43%)
 Frame = -1

Query: 424 ISAKDFLTAVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDT 245
           + AKD L  +R    E  + S LL  V+                S + H   VVD+ G  
Sbjct: 119 LHAKDLLKFLREDA-EVFDLSSLLRPVVIVPESKRVDRMLKDFRSERFHMAIVVDEFGAV 177

Query: 244 EGVITLRDIISKLVHEPRHYFGD 176
            G++T+ DI+ ++V +    F +
Sbjct: 178 SGLVTIEDILEQIVGDIEDEFDE 200

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>YL28_SCHPO (Q10343) Hypothetical protein C1556.08c in chromosome I|
          Length = 334

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = -1

Query: 346 VITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLVHE 197
           V TC+              +++HR++VVD+    EG+++L DI++ ++++
Sbjct: 267 VHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYD 316

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>IMDH_AQUAE (O67820) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 490

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 26/110 (23%), Positives = 50/110 (45%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           + GVPV+D    K IG ++ RD++++   P+ Y +       +F+T              
Sbjct: 121 ISGVPVVDEE-RKLIGILTNRDLRFI--KPEDYSK----PVSEFMTK------------- 160

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISK 209
              ++IT                 KI ++ +VD +G  +G+IT++DI+ +
Sbjct: 161 --ENLITAPEGITLDEAEEIFRKYKIEKLPIVDKEGKIKGLITIKDIVKR 208

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>YUGS_BACSU (O05241) Hypothetical UPF0053 protein yugS|
          Length = 434

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 21/78 (26%), Positives = 37/78 (47%)
 Frame = -1

Query: 424 ISAKDFLTAVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDT 245
           I++KD   A  + L +  + + ++  VI                  +IH   +VD+ G T
Sbjct: 269 INSKDMFKA--YFLGQPIKLNQIMRPVIRVIESIPVQQLLIRMQKERIHMAILVDEYGGT 326

Query: 244 EGVITLRDIISKLVHEPR 191
            G++T+ DII ++V E R
Sbjct: 327 AGLVTVEDIIEEIVGEIR 344

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>YRKA_BACSU (P54428) Hypothetical UPF0053 protein yrkA|
          Length = 434

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
 Frame = -1

Query: 424 ISAKDFLTA-------VRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYV 266
           I+AK+FL+A       ++   + ++  +P++H +                   + H   +
Sbjct: 264 INAKEFLSAYIDTDQKIKEDFKLENHINPVIHVI----ESVPIHDVLVKMQKERTHIAIL 319

Query: 265 VDDKGDTEGVITLRDIISKLVHEPRHYF 182
           VD+ G T G++T  DI+ ++V E R  F
Sbjct: 320 VDEYGGTSGLVTAEDILEEIVGEIRDEF 347

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>AAKG2_MOUSE (Q91WG5) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2)
          Length = 566

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 28/115 (24%), Positives = 48/115 (41%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           +  +PV+D +G K +   S  DV   L+A K Y        +    A++H  Q       
Sbjct: 454 ISALPVVDESG-KVVDIYSKFDV-INLAAEKTYNNLDITVTQ----ALQHRSQ------- 500

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLVHEP 194
               V+ C +              ++HR+ VV++     G+I+L DI+  L+  P
Sbjct: 501 YFEGVVKCSKLETLETIVDRIVRAEVHRLVVVNEADSIVGIISLSDILQALILTP 555

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>AAKG2_HUMAN (Q9UGJ0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2) (H91620p)
          Length = 569

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 28/115 (24%), Positives = 48/115 (41%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           +  +PV+D +G K +   S  DV   L+A K Y        +    A++H  Q       
Sbjct: 457 ISALPVVDESG-KVVDIYSKFDV-INLAAEKTYNNLDITVTQ----ALQHRSQ------- 503

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLVHEP 194
               V+ C +              ++HR+ VV++     G+I+L DI+  L+  P
Sbjct: 504 YFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSIVGIISLSDILQALILTP 558

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>AAKG1_HUMAN (P54619) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 331

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 29/112 (25%), Positives = 46/112 (41%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           V  +PV+D  G + +   S  DV   L+A K Y        K    A++H        S 
Sbjct: 225 VSALPVVDEKG-RVVDIYSKFDV-INLAAEKTYNNLDVSVTK----ALQHR-------SH 271

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLV 203
               V+ C                ++HR+ VVD+    +G+++L DI+  LV
Sbjct: 272 YFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 323

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>AAKG1_PIG (Q09138) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg) (38 kDa subunit)
          Length = 330

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 29/112 (25%), Positives = 46/112 (41%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           V  +PV+D  G + +   S  DV   L+A K Y        K    A++H        S 
Sbjct: 225 VSALPVVDEKG-RVVDIYSKFDV-INLAAEKTYNNLDVSVTK----ALQHR-------SH 271

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLV 203
               V+ C                ++HR+ VVD+    +G+++L DI+  LV
Sbjct: 272 YFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 323

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>AAKG1_BOVIN (P58108) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 330

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 29/112 (25%), Positives = 46/112 (41%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           V  +PV+D  G + +   S  DV   L+A K Y        K    A++H        S 
Sbjct: 225 VSALPVVDEKG-RVVDIYSKFDV-INLAAEKTYNNLDVSVTK----ALQHR-------SH 271

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLV 203
               V+ C                ++HR+ VVD+    +G+++L DI+  LV
Sbjct: 272 YFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 323

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>AAKG1_RAT (P80385) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 330

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 29/112 (25%), Positives = 46/112 (41%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           V  +PV+D  G + +   S  DV   L+A K Y        K    A++H        S 
Sbjct: 224 VSALPVVDEKG-RVVDIYSKFDV-INLAAEKTYNNLDVSVTK----ALQHR-------SH 270

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLV 203
               V+ C                ++HR+ VVD+    +G+++L DI+  LV
Sbjct: 271 YFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALV 322

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>AAKG1_MOUSE (O54950) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 330

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 29/112 (25%), Positives = 46/112 (41%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           V  +PV+D  G + +   S  DV   L+A K Y        K    A++H        S 
Sbjct: 224 VSALPVVDEKG-RVVDIYSKFDV-INLAAEKTYNNLDVSVTK----ALQHR-------SH 270

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLV 203
               V+ C                ++HR+ VVD+    +G+++L DI+  LV
Sbjct: 271 YFEGVLKCYLHETLETIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALV 322

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>Y1426_METJA (Q58821) Hypothetical protein MJ1426|
          Length = 168

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDV-----------QYLLSAPK--IYKQYRT-ISAKDFLT 401
           + G PV++ +G K +G IS  D+             +L +P   I    +T +  ++F+ 
Sbjct: 45  ISGAPVLNKDG-KLVGIISESDIVKTIVTHNEDLNLILPSPLDLIELPLKTALKIEEFME 103

Query: 400 AVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRD 221
            +++ L+ +     +   VI  K                I R+ VVDD+G+  G++T  D
Sbjct: 104 DLKNALKTKVR-DVMTRKVIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGD 162

Query: 220 IISKLV 203
           +I  L+
Sbjct: 163 LIEALI 168

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>YHDP_BACSU (O07585) Hypothetical UPF0053 protein yhdP|
          Length = 444

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 286 KIHRIYVVDDKGDTEGVITLRDIISKLVHEPRHYF 182
           ++H   + D+ G T G++T+ DII ++V E R  F
Sbjct: 311 RVHMAILSDEYGGTAGLVTVEDIIEEIVGEIRDEF 345

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>AAKG3_MOUSE (Q8BGM7) 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK|
           gamma-3 chain) (AMPK gamma3)
          Length = 489

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = -1

Query: 355 LHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLVHEP 194
           L  V++C+               ++HR+ +VD+     GV++L DI+  LV  P
Sbjct: 428 LEGVLSCQPHESLGEVIDRIAREQVHRLVLVDETQHLLGVVSLSDILQALVLSP 481

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>AAKG3_HUMAN (Q9UGI9) 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK|
           gamma-3 chain) (AMPK gamma3)
          Length = 489

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = -1

Query: 355 LHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLVHEP 194
           L  V++C+               ++HR+ +VD+     GV++L DI+  LV  P
Sbjct: 428 LEGVLSCQPHESLGEVIDRIAREQVHRLVLVDETQHLLGVVSLSDILQALVLSP 481

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>AAKG2_PONPY (Q5R4S0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2)
          Length = 524

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 27/115 (23%), Positives = 47/115 (40%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           +  +PV+D +G K +   S  DV   L+A K Y        +    A++H  Q       
Sbjct: 412 ISALPVVDESG-KVVDIYSKFDV-INLAAEKTYNNLDITVTQ----ALQHRSQ------- 458

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLVHEP 194
               V+ C +              ++HR+ V ++     G+I+L DI+  L+  P
Sbjct: 459 YFEGVVKCNKLEILETIVDRIVRAEVHRLVVANEADSIVGIISLSDILQALILTP 513

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>AAKG3_PIG (Q9MYP4) 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK|
           gamma-3 chain) (AMPK gamma3)
          Length = 514

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = -1

Query: 355 LHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLVHEP 194
           L  V++C+               ++HR+ +VD+     GV++L DI+  LV  P
Sbjct: 453 LEGVLSCQPHETLGEVIDRIVREQVHRLVLVDETQHLLGVVSLSDILQALVLSP 506

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>Y107_HAEIN (Q57017) Hypothetical UPF0053 protein HI0107|
          Length = 420

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 268 VVDDKGDTEGVITLRDIISKLVHEPRHYFGDFFDGVVP 155
           VVD+ GD +G++TL DI+ ++V       GDF     P
Sbjct: 306 VVDEYGDIKGLVTLEDILEEIV-------GDFTTSTAP 336

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>YHDT_BACSU (O07589) Hypothetical UPF0053 protein yhdT|
          Length = 461

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -1

Query: 286 KIHRIYVVDDKGDTEGVITLRDIISKLVHEPRHYFGD 176
           +IH   + D+ G T G++T  DI+ ++V E R  F +
Sbjct: 314 RIHMAILSDEYGGTSGLVTTEDILEEIVGEIRDEFDE 350

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>IMDH_HELPY (P56088) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 481

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 34/122 (27%), Positives = 52/122 (42%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           + GVPV+D  G   IG ++ RDV++     K  K    ++    +TA  H      EAS 
Sbjct: 117 ISGVPVVDDKGL-LIGILTNRDVRFETDLSK--KVGDVMTKMPLVTA--HVGISLDEASD 171

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLVHEPRHYFG 179
           L+H                     KI ++ +VD     +G+IT++D I K +  P     
Sbjct: 172 LMH-------------------KHKIEKLPIVDKDNVLKGLITIKD-IQKRIEYPEANKD 211

Query: 178 DF 173
           DF
Sbjct: 212 DF 213



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = -1

Query: 412 DFLTAVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVI 233
           D  T V+   + +   S +++D I               D+ KI  + VVDDKG   G++
Sbjct: 74  DIQTQVKEITKVKKSESGVINDPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGIL 133

Query: 232 TLRDI 218
           T RD+
Sbjct: 134 TNRDV 138

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>IMDH_HELPJ (Q9ZL14) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 481

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 34/122 (27%), Positives = 52/122 (42%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           + GVPV+D  G   IG ++ RDV++     K  K    ++    +TA  H      EAS 
Sbjct: 117 ISGVPVVDDKGL-LIGILTNRDVRFETDLSK--KVGDVMTKMPLVTA--HVGISLDEASD 171

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLVHEPRHYFG 179
           L+H                     KI ++ +VD     +G+IT++D I K +  P     
Sbjct: 172 LMH-------------------KHKIEKLPIVDKDNVLKGLITIKD-IQKRIEYPEANKD 211

Query: 178 DF 173
           DF
Sbjct: 212 DF 213



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = -1

Query: 412 DFLTAVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVI 233
           D  T V+   + +   S +++D I               D+ KI  + VVDDKG   G++
Sbjct: 74  DIQTQVKEITKVKKSESGVINDPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGIL 133

Query: 232 TLRDI 218
           T RD+
Sbjct: 134 TNRDV 138

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>Y1842_MYCTU (Q50592) Hypothetical UPF0053 protein Rv1842c/MT1890|
          Length = 455

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 268 VVDDKGDTEGVITLRDIISKLVHEPRHYFGDFFDGVV 158
           VVD+ G T G++TL D+I ++V + R    D    VV
Sbjct: 319 VVDEYGGTAGMVTLEDLIEEIVGDVRDEHDDATPDVV 355

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>IMDH_BACHD (Q9KGN8) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 485

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 23/115 (20%), Positives = 53/115 (46%)
 Frame = -1

Query: 538 VGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEASP 359
           + GVP++D +  K +G ++ RD++++               +D+ T +   + +++    
Sbjct: 120 ISGVPIVDED-QKLVGILTNRDLRFI---------------EDYSTLIDDVMTKEN---- 159

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLVHEP 194
               ++T                 KI ++ +VD+ G  +G+IT++D I K++  P
Sbjct: 160 ----LVTAPVGTTLKEAEEILQKHKIEKLPLVDESGTLKGLITIKD-IEKVIEFP 209

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>DSRAD_MOUSE (Q99MU3) Double-stranded RNA-specific adenosine deaminase (EC|
           3.5.4.-) (DRADA) (RNA adenosine deaminase 1)
          Length = 1178

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = -3

Query: 479 QRCTISSECPQDIQTIQDNLSQGFPYCGPAPSPGATRSVAAAARRDHMQK 330
           +R T S+  P      +   S  FP C P P+ GA+ SVAA+ R ++ Q+
Sbjct: 319 KRSTHSAPAPTPTAVPEATRSPSFPACHPPPA-GASSSVAASKRVENGQE 367

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>IMDH_CHLVI (O50316) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 493

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -1

Query: 349 DVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDI 218
           D+IT +               KI ++ V+D++G  +G+IT +DI
Sbjct: 161 DLITAQEDIDLLAAEEILMQNKIEKLLVIDEEGYLKGLITFKDI 204

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>Y740_RICPR (O05961) Hypothetical UPF0053 protein RP740|
          Length = 303

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -1

Query: 286 KIHRIYVVDDKGDTEGVITLRDIISKLV 203
           + H   VVD+ G T+G++T+ D+I ++V
Sbjct: 170 RTHIAIVVDEYGGTDGLVTIEDLIEEIV 197

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>MVL_DROME (P49283) Protein Malvolio|
          Length = 596

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
 Frame = +3

Query: 384 RWCRTAVRKSLAEIVLYCLYILGALRRYCTS-------LMLMLPIAFVPFVSIT 524
           RWCR  V + +A I  +CL +   +    +        + L LP A +P ++ T
Sbjct: 420 RWCRVLVTRCIAIIPTFCLAMFSKMEDLTSMNDILNAVMSLQLPFAAIPTIAFT 473

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>IMDH_PYRHO (O58045) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 486

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 26/111 (23%), Positives = 51/111 (45%)
 Frame = -1

Query: 541 GVGGVPVMDTNGTKAIGNISIRDVQYLLSAPKIYKQYRTISAKDFLTAVRHHLQEQHEAS 362
           G+ G+PV++    K +G I+ +D+     A +  K  + +  K+ +T     + E  E  
Sbjct: 123 GIDGLPVVEDE--KVVGIITKKDI-----AAREGKLVKELMTKEVIT-----VPESIEVE 170

Query: 361 PLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISK 209
             L  +I                  +I R+ VVD++G   G+IT+ D++++
Sbjct: 171 EALKIMI----------------ENRIDRLPVVDERGKLVGLITMSDLVAR 205

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>Y1404_METJA (Q58799) Hypothetical protein MJ1404|
          Length = 421

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = -1

Query: 358 LLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDIISKLVHEPRHYFG 179
           +  +VIT                  I R+ VVDD+G+  G++T  DI+ K+    +    
Sbjct: 139 MTRNVITINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTEVDILKKVFKPKKKMTA 198

Query: 178 DFFDG 164
             F G
Sbjct: 199 GEFKG 203

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>CORC_SHIFL (P0AE81) Magnesium and cobalt efflux protein corC|
          Length = 292

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 18/76 (23%), Positives = 30/76 (39%)
 Frame = -1

Query: 424 ISAKDFLTAVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDT 245
           + AKD L  +R    E      +L   +                S + H   V+D+ G  
Sbjct: 117 LMAKDLLPFMRSDA-EAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGV 175

Query: 244 EGVITLRDIISKLVHE 197
            G++T+ DI+  +V E
Sbjct: 176 SGLVTIEDILELIVGE 191

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>CORC_ECOLI (P0AE78) Magnesium and cobalt efflux protein corC|
          Length = 292

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 18/76 (23%), Positives = 30/76 (39%)
 Frame = -1

Query: 424 ISAKDFLTAVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDT 245
           + AKD L  +R    E      +L   +                S + H   V+D+ G  
Sbjct: 117 LMAKDLLPFMRSDA-EAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGV 175

Query: 244 EGVITLRDIISKLVHE 197
            G++T+ DI+  +V E
Sbjct: 176 SGLVTIEDILELIVGE 191

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>CORC_ECOL6 (P0AE79) Magnesium and cobalt efflux protein corC|
          Length = 292

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 18/76 (23%), Positives = 30/76 (39%)
 Frame = -1

Query: 424 ISAKDFLTAVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDT 245
           + AKD L  +R    E      +L   +                S + H   V+D+ G  
Sbjct: 117 LMAKDLLPFMRSDA-EAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGV 175

Query: 244 EGVITLRDIISKLVHE 197
            G++T+ DI+  +V E
Sbjct: 176 SGLVTIEDILELIVGE 191

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>CORC_ECO57 (P0AE80) Magnesium and cobalt efflux protein corC|
          Length = 292

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 18/76 (23%), Positives = 30/76 (39%)
 Frame = -1

Query: 424 ISAKDFLTAVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDT 245
           + AKD L  +R    E      +L   +                S + H   V+D+ G  
Sbjct: 117 LMAKDLLPFMRSDA-EAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGV 175

Query: 244 EGVITLRDIISKLVHE 197
            G++T+ DI+  +V E
Sbjct: 176 SGLVTIEDILELIVGE 191

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>IMDH_CHLTE (Q8KCW4) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 494

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -1

Query: 349 DVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEGVITLRDI 218
           +++T K               KI ++ ++DD G  +G+IT +DI
Sbjct: 161 NLVTAKEGIDLLTAEDILMRNKIEKLLIIDDNGYLKGLITFKDI 204

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>CORC_VIBCH (Q9KTE3) Magnesium and cobalt efflux protein corC|
          Length = 291

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 286 KIHRIYVVDDKGDTEGVITLRDIISKLVHEPRHYFGD 176
           + H   VVD+ G   G++T+ DI+ ++V +    F D
Sbjct: 160 RYHMAIVVDEFGGVSGLVTIEDILEEIVGDIEDEFDD 196

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>CORC_SALTY (P0A2L3) Magnesium and cobalt efflux protein corC|
          Length = 292

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 18/76 (23%), Positives = 30/76 (39%)
 Frame = -1

Query: 424 ISAKDFLTAVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDT 245
           + AKD L  +R    E      +L   +                S + H   V+D+ G  
Sbjct: 117 LMAKDLLPFMRSDA-EAFSMDKVLRTAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGV 175

Query: 244 EGVITLRDIISKLVHE 197
            G++T+ DI+  +V E
Sbjct: 176 SGLVTIEDILELIVGE 191

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>CORC_SALTI (P0A2L4) Magnesium and cobalt efflux protein corC|
          Length = 292

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 18/76 (23%), Positives = 30/76 (39%)
 Frame = -1

Query: 424 ISAKDFLTAVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDT 245
           + AKD L  +R    E      +L   +                S + H   V+D+ G  
Sbjct: 117 LMAKDLLPFMRSDA-EAFSMDKVLRTAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGV 175

Query: 244 EGVITLRDIISKLVHE 197
            G++T+ DI+  +V E
Sbjct: 176 SGLVTIEDILELIVGE 191

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>Y1254_SYNY3 (P74078) Hypothetical UPF0053 protein sll1254|
          Length = 346

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 280 HRIYVVDDKGDTEGVITLRDIISKLVHE 197
           H + V+D+ G   GVITL D++  L  E
Sbjct: 289 HLMVVIDEYGGVAGVITLEDVVEVLTGE 316

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>CORC_BUCAP (Q8K9C0) Magnesium and cobalt efflux protein corC|
          Length = 291

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 17/81 (20%), Positives = 33/81 (40%)
 Frame = -1

Query: 418 AKDFLTAVRHHLQEQHEASPLLHDVITCKRXXXXXXXXXXXDSTKIHRIYVVDDKGDTEG 239
           AKD L  ++H  ++      +L   +                  + H   V+D+ G   G
Sbjct: 118 AKDLLPFMKHP-EDAFCIKNILRSAVVVPESKSVDTMLKEFRLKRSHMAIVIDEFGAVSG 176

Query: 238 VITLRDIISKLVHEPRHYFGD 176
           ++T+ DI+  +V E +  + D
Sbjct: 177 LVTIEDILELIVGEIQDEYDD 197

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>YC19_KLEPN (Q48445) Hypothetical UPF0053 protein in cps region (ORF19)|
           (Fragment)
          Length = 320

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 286 KIHRIYVVDDKGDTEGVITLRDIISKL 206
           + H  +VVD+ G  EG++TL D++  +
Sbjct: 210 RTHFAFVVDEFGSVEGIVTLSDVMETI 236


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,507,564
Number of Sequences: 219361
Number of extensions: 1540516
Number of successful extensions: 4925
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 4740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4910
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result