ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19c13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104588.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
2dbj|AK104732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
3dbj|AK101795.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
4dbj|AK071912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
5ref|XM_472247.1| Oryza sativa (japonica cultivar-group), predic... 377 e-101
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 285 7e-74
7emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4,... 285 7e-74
8gb|AY105248.1| Zea mays PCO134665 mRNA sequence 266 7e-68
9gb|AY971683.1| Cirsium arvense microsatellite CarvC128 sequence 50 0.008
10emb|AL589942.10| Human DNA sequence from clone RP11-4F1 on chrom... 46 0.12
11emb|AL445492.10| Human DNA sequence from clone RP11-137O18 on ch... 46 0.12
12gb|AC114825.4| Mus musculus BAC clone RP24-104P22 from chromosom... 42 1.9
13emb|AL844157.5| Mouse DNA sequence from clone RP24-313C24 on chr... 42 1.9
14dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
16dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
17dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
18dbj|AK105517.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
19gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosom... 40 7.4
20gb|AE014306.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 7.4
21ref|XM_763655.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 7.4
22gb|AC140139.2| Homo sapiens chromosome 5 clone RP11-1417I21, com... 40 7.4
23gb|AC139776.2| Homo sapiens chromosome 5 clone RP11-1005E12, com... 40 7.4
24gb|AC139495.2| Homo sapiens chromosome 5 clone RP11-848G14, comp... 40 7.4
25gb|AC139272.3| Homo sapiens chromosome 5 clone RP11-589F5, compl... 40 7.4
26gb|AC138959.2| Homo sapiens chromosome 5 clone RP11-880C13, comp... 40 7.4
27gb|AC138866.2| Homo sapiens chromosome 5 clone RP11-1415C14, com... 40 7.4
28gb|AC146949.1| Homo sapiens chromosome 5 clone RP11-1198D22, com... 40 7.4
29gb|AC145034.2| Homo sapiens chromosome 5 clone RP11-1414O21, com... 40 7.4
30gb|AC138957.2| Homo sapiens chromosome 5 clone RP11-846E4, compl... 40 7.4
31gb|AC139505.2| Homo sapiens chromosome 5 clone RP11-910M8, compl... 40 7.4
32gb|AC138928.2| Homo sapiens chromosome 5 clone RP11-674O19, comp... 40 7.4
33gb|AC145141.2| Homo sapiens chromosome 5 clone RP11-1364K7, comp... 40 7.4
34gb|AC145144.2| Homo sapiens chromosome 5 clone RP11-1432L1, comp... 40 7.4
35gb|AC145102.2| Homo sapiens chromosome 5 clone RP11-696L12, comp... 40 7.4
36emb|AL590240.5| Human DNA sequence from clone RP11-266I3 on chro... 40 7.4
37emb|AL445226.9| Human DNA sequence from clone RP11-261F2 on chro... 40 7.4
38gb|AC139507.2| Homo sapiens chromosome 5 clone RP11-937A6, compl... 40 7.4
39gb|AC139463.2| Homo sapiens chromosome 5 clone RPCI-11_1264N5, c... 40 7.4
40gb|AC138911.2| Homo sapiens chromosome 5 clone RP11-618O22, comp... 40 7.4
41emb|AL133255.14| Human DNA sequence from clone RP11-239L20 on ch... 40 7.4
42emb|AL031286.2|HS681J21 Human DNA sequence from clone RP4-681J21... 40 7.4
43gb|AC139492.2| Homo sapiens chromosome 5 clone RP11-842C12, comp... 40 7.4
44emb|AL009030.15|HS28I24 Human DNA sequence from clone RP1-28I24 ... 40 7.4
45gb|AC182492.2| Pan troglodytes BAC clone CH251-294F23 from chrom... 40 7.4
46gb|AC139500.2| Homo sapiens chromosome 5 clone RP11-864E4, compl... 40 7.4
47gb|AC138850.2| Homo sapiens chromosome 5 clone RP11-1308P14, com... 40 7.4
48gb|AC140175.2| Homo sapiens chromosome 5 clone RP11-833G1, compl... 40 7.4
49gb|AC108108.2| Homo sapiens chromosome 5 clone RP11-260M21, comp... 40 7.4
50gb|AC138951.2| Homo sapiens chromosome 5 clone RP11-823P9, compl... 40 7.4
51gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene... 40 7.4
52gb|AC138821.2| Homo sapiens chromosome 5 clone RP11-1104E16, com... 40 7.4
53gb|AC093274.4| Homo sapiens chromosome 5 clone RP11-374A4, compl... 40 7.4
54gb|AC131392.2| Homo sapiens chromosome 5 clone RP11-98J23, compl... 40 7.4
55dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.4
56gb|AY785435.1| Uncultured bacterium clone HZ04 genomic sequence 40 7.4
57emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.4
58gb|AY111046.1| Zea mays CL31773_1 mRNA sequence 40 7.4
59gb|AC130537.4| Mus musculus BAC clone RP23-412D3 from 8, complet... 40 7.4
60dbj|AP005329.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 7.4
61dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.4
62gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosom... 40 7.4 
>dbj|AK104588.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G07, full
            insert sequence
          Length = 1239

 Score =  381 bits (192), Expect = e-102
 Identities = 360/416 (86%)
 Strand = Plus / Minus

                                                                        
Query: 129  tgtcatacggtactgtttgcgggtaggggaacgacgccgtcgaagaaatccccaaagtaa 188
            |||||||| || |||||||  || |||||||| || || |||||||||||||||||||||
Sbjct: 1034 tgtcatacagtgctgtttggaggcaggggaacaacaccatcgaagaaatccccaaagtaa 975

                                                                        
Query: 189  tgccgtggctcgtgcaccagcttggagattatgtccctcagtgtgatcaccccctcggtg 248
            || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 974  tggcgtggctcgtgcaccagcttggagattatgtccctcagcgtgatgaccccctcggtg 915

                                                                        
Query: 249  tcccccttgtcgtcgaccacgtagatcctgtggatcttggtcgagtccagcttcagtatg 308
            | ||||||||| |||| |||||||||||||||||||||   |||||||||||||||||||
Sbjct: 914  ttccccttgtcatcgatcacgtagatcctgtggatcttctccgagtccagcttcagtatg 855

                                                                        
Query: 309  atatccttgatcacgtcgtctcttttgcatgtgatcacgtcgtgcagcagcggcgacgct 368
            || |||||||   | || || ||| |||||||||| |||  |   |||| |||||| || 
Sbjct: 854  atgtccttgacttcatcatcccttctgcatgtgatgacggagccgagcaacggcgaggcc 795

                                                                        
Query: 369  tcgtgttgctcctggagatggtgccggaccgcagtaaggaaatccttggctgagattgtc 428
            |||||||||||||| || || ||||||||||| ||||||||||||||||| | |||||||
Sbjct: 794  tcgtgttgctcctgaaggtgttgccggaccgcggtaaggaaatccttggccgtgattgtc 735

                                                                        
Query: 429  ctgtattgtttgtatatcttgggggcactcagaagatattgtacatctctgatgctaatg 488
            ||||| | ||||||||| ||||||||| | ||||||||||| |||||||||||||| || 
Sbjct: 734  ctgtaatctttgtatatgttgggggcagttagaagatattggacatctctgatgctgata 675

                                                                    
Query: 489  ttaccaattgcttttgttccatttgtgtccataacaggcacaccaccaaccccttt 544
            || |||||||||||||| ||| ||||||||||||| || |  |||||||| |||||
Sbjct: 674  ttgccaattgcttttgtgccacttgtgtccataaccgggaggccaccaacgccttt 619
to top
>dbj|AK104732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C08, full
            insert sequence
          Length = 1239

 Score =  381 bits (192), Expect = e-102
 Identities = 360/416 (86%)
 Strand = Plus / Minus

                                                                        
Query: 129  tgtcatacggtactgtttgcgggtaggggaacgacgccgtcgaagaaatccccaaagtaa 188
            |||||||| || |||||||  || |||||||| || || |||||||||||||||||||||
Sbjct: 1034 tgtcatacagtgctgtttggaggcaggggaacaacaccatcgaagaaatccccaaagtaa 975

                                                                        
Query: 189  tgccgtggctcgtgcaccagcttggagattatgtccctcagtgtgatcaccccctcggtg 248
            || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 974  tggcgtggctcgtgcaccagcttggagattatgtccctcagcgtgatgaccccctcggtg 915

                                                                        
Query: 249  tcccccttgtcgtcgaccacgtagatcctgtggatcttggtcgagtccagcttcagtatg 308
            | ||||||||| |||| |||||||||||||||||||||   |||||||||||||||||||
Sbjct: 914  ttccccttgtcatcgatcacgtagatcctgtggatcttctccgagtccagcttcagtatg 855

                                                                        
Query: 309  atatccttgatcacgtcgtctcttttgcatgtgatcacgtcgtgcagcagcggcgacgct 368
            || |||||||   | || || ||| |||||||||| |||  |   |||| |||||| || 
Sbjct: 854  atgtccttgacttcatcatcccttctgcatgtgatgacggagccgagcaacggcgaggcc 795

                                                                        
Query: 369  tcgtgttgctcctggagatggtgccggaccgcagtaaggaaatccttggctgagattgtc 428
            |||||||||||||| || || ||||||||||| ||||||||||||||||| | |||||||
Sbjct: 794  tcgtgttgctcctgaaggtgttgccggaccgcggtaaggaaatccttggccgtgattgtc 735

                                                                        
Query: 429  ctgtattgtttgtatatcttgggggcactcagaagatattgtacatctctgatgctaatg 488
            ||||| | ||||||||| ||||||||| | ||||||||||| |||||||||||||| || 
Sbjct: 734  ctgtaatctttgtatatgttgggggcagttagaagatattggacatctctgatgctgata 675

                                                                    
Query: 489  ttaccaattgcttttgttccatttgtgtccataacaggcacaccaccaaccccttt 544
            || |||||||||||||| ||| ||||||||||||| || |  |||||||| |||||
Sbjct: 674  ttgccaattgcttttgtgccacttgtgtccataaccgggaggccaccaacgccttt 619
to top
>dbj|AK101795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066B14, full
            insert sequence
          Length = 1692

 Score =  381 bits (192), Expect = e-102
 Identities = 360/416 (86%)
 Strand = Plus / Minus

                                                                        
Query: 129  tgtcatacggtactgtttgcgggtaggggaacgacgccgtcgaagaaatccccaaagtaa 188
            |||||||| || |||||||  || |||||||| || || |||||||||||||||||||||
Sbjct: 1481 tgtcatacagtgctgtttggaggcaggggaacaacaccatcgaagaaatccccaaagtaa 1422

                                                                        
Query: 189  tgccgtggctcgtgcaccagcttggagattatgtccctcagtgtgatcaccccctcggtg 248
            || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 1421 tggcgtggctcgtgcaccagcttggagattatgtccctcagcgtgatgaccccctcggtg 1362

                                                                        
Query: 249  tcccccttgtcgtcgaccacgtagatcctgtggatcttggtcgagtccagcttcagtatg 308
            | ||||||||| |||| |||||||||||||||||||||   |||||||||||||||||||
Sbjct: 1361 ttccccttgtcatcgatcacgtagatcctgtggatcttctccgagtccagcttcagtatg 1302

                                                                        
Query: 309  atatccttgatcacgtcgtctcttttgcatgtgatcacgtcgtgcagcagcggcgacgct 368
            || |||||||   | || || ||| |||||||||| |||  |   |||| |||||| || 
Sbjct: 1301 atgtccttgacttcatcatcccttctgcatgtgatgacggagccgagcaacggcgaggcc 1242

                                                                        
Query: 369  tcgtgttgctcctggagatggtgccggaccgcagtaaggaaatccttggctgagattgtc 428
            |||||||||||||| || || ||||||||||| ||||||||||||||||| | |||||||
Sbjct: 1241 tcgtgttgctcctgaaggtgttgccggaccgcggtaaggaaatccttggccgtgattgtc 1182

                                                                        
Query: 429  ctgtattgtttgtatatcttgggggcactcagaagatattgtacatctctgatgctaatg 488
            ||||| | ||||||||| ||||||||| | ||||||||||| |||||||||||||| || 
Sbjct: 1181 ctgtaatctttgtatatgttgggggcagttagaagatattggacatctctgatgctgata 1122

                                                                    
Query: 489  ttaccaattgcttttgttccatttgtgtccataacaggcacaccaccaaccccttt 544
            || |||||||||||||| ||| ||||||||||||| || |  |||||||| |||||
Sbjct: 1121 ttgccaattgcttttgtgccacttgtgtccataaccgggaggccaccaacgccttt 1066
to top
>dbj|AK071912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063J16, full
            insert sequence
          Length = 1487

 Score =  381 bits (192), Expect = e-102
 Identities = 360/416 (86%)
 Strand = Plus / Minus

                                                                        
Query: 129  tgtcatacggtactgtttgcgggtaggggaacgacgccgtcgaagaaatccccaaagtaa 188
            |||||||| || |||||||  || |||||||| || || |||||||||||||||||||||
Sbjct: 1365 tgtcatacagtgctgtttggaggcaggggaacaacaccatcgaagaaatccccaaagtaa 1306

                                                                        
Query: 189  tgccgtggctcgtgcaccagcttggagattatgtccctcagtgtgatcaccccctcggtg 248
            || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 1305 tggcgtggctcgtgcaccagcttggagattatgtccctcagcgtgatgaccccctcggtg 1246

                                                                        
Query: 249  tcccccttgtcgtcgaccacgtagatcctgtggatcttggtcgagtccagcttcagtatg 308
            | ||||||||| |||| |||||||||||||||||||||   |||||||||||||||||||
Sbjct: 1245 ttccccttgtcatcgatcacgtagatcctgtggatcttctccgagtccagcttcagtatg 1186

                                                                        
Query: 309  atatccttgatcacgtcgtctcttttgcatgtgatcacgtcgtgcagcagcggcgacgct 368
            || |||||||   | || || ||| |||||||||| |||  |   |||| |||||| || 
Sbjct: 1185 atgtccttgacttcatcatcccttctgcatgtgatgacggagccgagcaacggcgaggcc 1126

                                                                        
Query: 369  tcgtgttgctcctggagatggtgccggaccgcagtaaggaaatccttggctgagattgtc 428
            |||||||||||||| || || ||||||||||| ||||||||||||||||| | |||||||
Sbjct: 1125 tcgtgttgctcctgaaggtgttgccggaccgcggtaaggaaatccttggccgtgattgtc 1066

                                                                        
Query: 429  ctgtattgtttgtatatcttgggggcactcagaagatattgtacatctctgatgctaatg 488
            ||||| | ||||||||| ||||||||| | ||||||||||| |||||||||||||| || 
Sbjct: 1065 ctgtaatctttgtatatgttgggggcagttagaagatattggacatctctgatgctgata 1006

                                                                    
Query: 489  ttaccaattgcttttgttccatttgtgtccataacaggcacaccaccaaccccttt 544
            || |||||||||||||| ||| ||||||||||||| || |  |||||||| |||||
Sbjct: 1005 ttgccaattgcttttgtgccacttgtgtccataaccgggaggccaccaacgccttt 950
to top
>ref|XM_472247.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1278

 Score =  377 bits (190), Expect = e-101
 Identities = 358/414 (86%)
 Strand = Plus / Minus

                                                                        
Query: 131  tcatacggtactgtttgcgggtaggggaacgacgccgtcgaagaaatccccaaagtaatg 190
            |||||| || |||||||  || |||||||| || || |||||||||||||||||||||||
Sbjct: 1278 tcatacagtgctgtttggaggcaggggaacaacaccatcgaagaaatccccaaagtaatg 1219

                                                                        
Query: 191  ccgtggctcgtgcaccagcttggagattatgtccctcagtgtgatcaccccctcggtgtc 250
             |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| 
Sbjct: 1218 gcgtggctcgtgcaccagcttggagattatgtccctcagcgtgatgaccccctcggtgtt 1159

                                                                        
Query: 251  ccccttgtcgtcgaccacgtagatcctgtggatcttggtcgagtccagcttcagtatgat 310
            ||||||||| |||| |||||||||||||||||||||   |||||||||||||||||||||
Sbjct: 1158 ccccttgtcatcgatcacgtagatcctgtggatcttctccgagtccagcttcagtatgat 1099

                                                                        
Query: 311  atccttgatcacgtcgtctcttttgcatgtgatcacgtcgtgcagcagcggcgacgcttc 370
             |||||||   | || || ||| |||||||||| |||  |   |||| |||||| || ||
Sbjct: 1098 gtccttgacttcatcatcccttctgcatgtgatgacggagccgagcaacggcgaggcctc 1039

                                                                        
Query: 371  gtgttgctcctggagatggtgccggaccgcagtaaggaaatccttggctgagattgtcct 430
            |||||||||||| || || ||||||||||| ||||||||||||||||| | |||||||||
Sbjct: 1038 gtgttgctcctgaaggtgttgccggaccgcggtaaggaaatccttggccgtgattgtcct 979

                                                                        
Query: 431  gtattgtttgtatatcttgggggcactcagaagatattgtacatctctgatgctaatgtt 490
            ||| | ||||||||| ||||||||| | ||||||||||| |||||||||||||| || ||
Sbjct: 978  gtaatctttgtatatgttgggggcagttagaagatattggacatctctgatgctgatatt 919

                                                                  
Query: 491  accaattgcttttgttccatttgtgtccataacaggcacaccaccaaccccttt 544
             |||||||||||||| ||| ||||||||||||| || |  |||||||| |||||
Sbjct: 918  gccaattgcttttgtgccacttgtgtccataaccgggaggccaccaacgccttt 865
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  285 bits (144), Expect = 7e-74
 Identities = 264/304 (86%)
 Strand = Plus / Plus

                                                                            
Query: 129      tgtcatacggtactgtttgcgggtaggggaacgacgccgtcgaagaaatccccaaagtaa 188
                |||||||| || |||||||  || |||||||| || || |||||||||||||||||||||
Sbjct: 18758009 tgtcatacagtgctgtttggaggcaggggaacaacaccatcgaagaaatccccaaagtaa 18758068

                                                                            
Query: 189      tgccgtggctcgtgcaccagcttggagattatgtccctcagtgtgatcaccccctcggtg 248
                || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 18758069 tggcgtggctcgtgcaccagcttggagattatgtccctcagcgtgatgaccccctcggtg 18758128

                                                                            
Query: 249      tcccccttgtcgtcgaccacgtagatcctgtggatcttggtcgagtccagcttcagtatg 308
                | ||||||||| |||| |||||||||||||||||||||   |||||||||||||||||||
Sbjct: 18758129 ttccccttgtcatcgatcacgtagatcctgtggatcttctccgagtccagcttcagtatg 18758188

                                                                            
Query: 309      atatccttgatcacgtcgtctcttttgcatgtgatcacgtcgtgcagcagcggcgacgct 368
                || |||||||   | || || ||| |||||||||| |||  |   |||| |||||| || 
Sbjct: 18758189 atgtccttgacttcatcatcccttctgcatgtgatgacggagccgagcaacggcgaggcc 18758248

                                                                            
Query: 369      tcgtgttgctcctggagatggtgccggaccgcagtaaggaaatccttggctgagattgtc 428
                |||||||||||||| || || ||||||||||| ||||||||||||||||| | |||||||
Sbjct: 18758249 tcgtgttgctcctgaaggtgttgccggaccgcggtaaggaaatccttggccgtgattgtc 18758308

                    
Query: 429      ctgt 432
                ||||
Sbjct: 18758309 ctgt 18758312



 Score =  105 bits (53), Expect = 1e-19
 Identities = 101/117 (86%)
 Strand = Plus / Plus

                                                                            
Query: 428      cctgtattgtttgtatatcttgggggcactcagaagatattgtacatctctgatgctaat 487
                |||||| | ||||||||| ||||||||| | ||||||||||| |||||||||||||| ||
Sbjct: 18758484 cctgtaatctttgtatatgttgggggcagttagaagatattggacatctctgatgctgat 18758543

                                                                         
Query: 488      gttaccaattgcttttgttccatttgtgtccataacaggcacaccaccaaccccttt 544
                 || |||||||||||||| ||| ||||||||||||| || |  |||||||| |||||
Sbjct: 18758544 attgccaattgcttttgtgccacttgtgtccataaccgggaggccaccaacgccttt 18758600
to top
>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21,
              complete sequence
          Length = 160456

 Score =  285 bits (144), Expect = 7e-74
 Identities = 264/304 (86%)
 Strand = Plus / Plus

                                                                          
Query: 129    tgtcatacggtactgtttgcgggtaggggaacgacgccgtcgaagaaatccccaaagtaa 188
              |||||||| || |||||||  || |||||||| || || |||||||||||||||||||||
Sbjct: 107172 tgtcatacagtgctgtttggaggcaggggaacaacaccatcgaagaaatccccaaagtaa 107231

                                                                          
Query: 189    tgccgtggctcgtgcaccagcttggagattatgtccctcagtgtgatcaccccctcggtg 248
              || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 107232 tggcgtggctcgtgcaccagcttggagattatgtccctcagcgtgatgaccccctcggtg 107291

                                                                          
Query: 249    tcccccttgtcgtcgaccacgtagatcctgtggatcttggtcgagtccagcttcagtatg 308
              | ||||||||| |||| |||||||||||||||||||||   |||||||||||||||||||
Sbjct: 107292 ttccccttgtcatcgatcacgtagatcctgtggatcttctccgagtccagcttcagtatg 107351

                                                                          
Query: 309    atatccttgatcacgtcgtctcttttgcatgtgatcacgtcgtgcagcagcggcgacgct 368
              || |||||||   | || || ||| |||||||||| |||  |   |||| |||||| || 
Sbjct: 107352 atgtccttgacttcatcatcccttctgcatgtgatgacggagccgagcaacggcgaggcc 107411

                                                                          
Query: 369    tcgtgttgctcctggagatggtgccggaccgcagtaaggaaatccttggctgagattgtc 428
              |||||||||||||| || || ||||||||||| ||||||||||||||||| | |||||||
Sbjct: 107412 tcgtgttgctcctgaaggtgttgccggaccgcggtaaggaaatccttggccgtgattgtc 107471

                  
Query: 429    ctgt 432
              ||||
Sbjct: 107472 ctgt 107475



 Score =  105 bits (53), Expect = 1e-19
 Identities = 101/117 (86%)
 Strand = Plus / Plus

                                                                          
Query: 428    cctgtattgtttgtatatcttgggggcactcagaagatattgtacatctctgatgctaat 487
              |||||| | ||||||||| ||||||||| | ||||||||||| |||||||||||||| ||
Sbjct: 107647 cctgtaatctttgtatatgttgggggcagttagaagatattggacatctctgatgctgat 107706

                                                                       
Query: 488    gttaccaattgcttttgttccatttgtgtccataacaggcacaccaccaaccccttt 544
               || |||||||||||||| ||| ||||||||||||| || |  |||||||| |||||
Sbjct: 107707 attgccaattgcttttgtgccacttgtgtccataaccgggaggccaccaacgccttt 107763
to top
>gb|AY105248.1| Zea mays PCO134665 mRNA sequence
          Length = 1817

 Score =  266 bits (134), Expect = 7e-68
 Identities = 341/410 (83%)
 Strand = Plus / Minus

                                                                        
Query: 129  tgtcatacggtactgtttgcgggtaggggaacgacgccgtcgaagaaatccccaaagtaa 188
            ||||||||||| |||||||| || |||||||| || || || ||||||||||||||||||
Sbjct: 1530 tgtcatacggtgctgtttgcaggcaggggaacaacaccatcaaagaaatccccaaagtaa 1471

                                                                        
Query: 189  tgccgtggctcgtgcaccagcttggagattatgtccctcagtgtgatcaccccctcggtg 248
            || |||||||| ||||||||||||||||||||||||||||  ||||| || |||||||||
Sbjct: 1470 tggcgtggctcatgcaccagcttggagattatgtccctcaaggtgatgactccctcggtg 1411

                                                                        
Query: 249  tcccccttgtcgtcgaccacgtagatcctgtggatcttggtcgagtccagcttcagtatg 308
            | ||| ||||| || || ||||||||||||||||||||    ||||||||||||||||||
Sbjct: 1410 ttccctttgtcatccacaacgtagatcctgtggatcttctcagagtccagcttcagtatg 1351

                                                                        
Query: 309  atatccttgatcacgtcgtctcttttgcatgtgatcacgtcgtgcagcagcggcgacgct 368
            || ||||||||    || ||  ||||||| ||||| || || ||||||| ||| || || 
Sbjct: 1350 atgtccttgattgtatcatcctttttgcaagtgatgacatcatgcagcaacggtgaggcc 1291

                                                                        
Query: 369  tcgtgttgctcctggagatggtgccggaccgcagtaaggaaatccttggctgagattgtc 428
            ||  | ||||||||||| ||||| || || ||| ||||||||||||| |  | ||||| |
Sbjct: 1290 tcacgctgctcctggaggtggtgtcgaacagcactaaggaaatcctttgtcgtgattgac 1231

                                                                        
Query: 429  ctgtattgtttgtatatcttgggggcactcagaagatattgtacatctctgatgctaatg 488
            ||||  | ||||||||||||||| ||| | | |||||| || ||||||||||||||||| 
Sbjct: 1230 ctgtgctctttgtatatcttgggagcagttaaaagatactggacatctctgatgctaata 1171

                                                              
Query: 489  ttaccaattgcttttgttccatttgtgtccataacaggcacaccaccaac 538
            |||||||| || |||| |||| |||||||||| || ||||  ||||||||
Sbjct: 1170 ttaccaatggcatttgctccacttgtgtccatgactggcaagccaccaac 1121
to top
>gb|AY971683.1| Cirsium arvense microsatellite CarvC128 sequence
          Length = 721

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 428 cctgtattgtttgtatatcttgggggcactcagaagatattgtacatctctgatgctaat 487
           |||||| | |||||| |||| ||||||| | || ||| |||| | |||||||||||| ||
Sbjct: 277 cctgtaatctttgtaaatctcgggggcaattaggagaaattgaatatctctgatgcttat 218

                    
Query: 488 gttaccaat 496
           |||||||||
Sbjct: 217 gttaccaat 209
to top
>emb|AL589942.10| Human DNA sequence from clone RP11-4F1 on chromosome 10, complete
             sequence
          Length = 20938

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 499   cttttgttccatttgtgtccata 521
             |||||||||||||||||||||||
Sbjct: 20818 cttttgttccatttgtgtccata 20840
to top
>emb|AL445492.10| Human DNA sequence from clone RP11-137O18 on chromosome 10 Contains
            part of the gene for VPS10 domain receptor protein SORCS
            3 (SORCS3), complete sequence
          Length = 149248

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 499  cttttgttccatttgtgtccata 521
            |||||||||||||||||||||||
Sbjct: 1888 cttttgttccatttgtgtccata 1910
to top
>gb|AC114825.4| Mus musculus BAC clone RP24-104P22 from chromosome 3, complete sequence
          Length = 202237

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 497   tgcttttgttccatttgtgtc 517
             |||||||||||||||||||||
Sbjct: 86194 tgcttttgttccatttgtgtc 86214
to top
>emb|AL844157.5| Mouse DNA sequence from clone RP24-313C24 on chromosome 4 Contains a
             novel peudogene and a CpG island, complete sequence
          Length = 156075

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 419   tgagattgtcctgtattgtttgtat 443
             ||||||||||||||||||| |||||
Sbjct: 52666 tgagattgtcctgtattgtctgtat 52642
to top
>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1485_B09
          Length = 66599

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 195   ggctcgtgcaccagcttggagattatgtc 223
             ||||||| ||||||||||| |||||||||
Sbjct: 31118 ggctcgtacaccagcttggcgattatgtc 31146
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 195      ggctcgtgcaccagcttggagattatgtc 223
                ||||||| ||||||||||| |||||||||
Sbjct: 40232166 ggctcgtacaccagcttggcgattatgtc 40232194
to top
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1793G04
          Length = 156714

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 195   ggctcgtgcaccagcttggagattatgtc 223
             ||||||| ||||||||||| |||||||||
Sbjct: 97944 ggctcgtacaccagcttggcgattatgtc 97972
to top
>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1425D05, complete sequence
          Length = 66450

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 195   ggctcgtgcaccagcttggagattatgtc 223
             ||||||| ||||||||||| |||||||||
Sbjct: 23516 ggctcgtacaccagcttggcgattatgtc 23544
to top
>dbj|AK105517.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F06, full
            insert sequence
          Length = 1473

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 195  ggctcgtgcaccagcttggagattatgtc 223
            ||||||| ||||||||||| |||||||||
Sbjct: 1255 ggctcgtacaccagcttggcgattatgtc 1227
to top
>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete sequence
          Length = 184079

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 402    gtaaggaaatccttggctgagatt 425
              ||||||||||||| ||||||||||
Sbjct: 110200 gtaaggaaatcctgggctgagatt 110177
to top
>gb|AE014306.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 3 of
              11 of the complete sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     aatgtacattttcttacaga 117
              ||||||||||||||||||||
Sbjct: 196414 aatgtacattttcttacaga 196395
to top
>ref|XM_763655.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_155_30673_36963)
            partial mRNA
          Length = 6291

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 104  cattttcttacagagtacagcgtt 127
            ||||||||| ||||||||||||||
Sbjct: 5448 cattttcttgcagagtacagcgtt 5471
to top
>gb|AC140139.2| Homo sapiens chromosome 5 clone RP11-1417I21, complete sequence
          Length = 216245

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 132552 ttgttccatttgtgtccata 132571
to top
>gb|AC139776.2| Homo sapiens chromosome 5 clone RP11-1005E12, complete sequence
          Length = 217545

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 193087 ttgttccatttgtgtccata 193068



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 119629 ttgttccatttgtgtccata 119648
to top
>gb|AC139495.2| Homo sapiens chromosome 5 clone RP11-848G14, complete sequence
          Length = 185911

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 131267 ttgttccatttgtgtccata 131286
to top
>gb|AC139272.3| Homo sapiens chromosome 5 clone RP11-589F5, complete sequence
          Length = 179723

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 177783 ttgttccatttgtgtccata 177764



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 104320 ttgttccatttgtgtccata 104339
to top
>gb|AC138959.2| Homo sapiens chromosome 5 clone RP11-880C13, complete sequence
          Length = 186787

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 184176 ttgttccatttgtgtccata 184195
to top
>gb|AC138866.2| Homo sapiens chromosome 5 clone RP11-1415C14, complete sequence
          Length = 213824

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 199532 ttgttccatttgtgtccata 199551
to top
>gb|AC146949.1| Homo sapiens chromosome 5 clone RP11-1198D22, complete sequence
          Length = 205574

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 502  ttgttccatttgtgtccata 521
            ||||||||||||||||||||
Sbjct: 6536 ttgttccatttgtgtccata 6517
to top
>gb|AC145034.2| Homo sapiens chromosome 5 clone RP11-1414O21, complete sequence
          Length = 210205

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   ttgttccatttgtgtccata 521
             ||||||||||||||||||||
Sbjct: 98912 ttgttccatttgtgtccata 98931
to top
>gb|AC138957.2| Homo sapiens chromosome 5 clone RP11-846E4, complete sequence
          Length = 177801

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 164005 ttgttccatttgtgtccata 164024
to top
>gb|AC139505.2| Homo sapiens chromosome 5 clone RP11-910M8, complete sequence
          Length = 202970

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   ttgttccatttgtgtccata 521
             ||||||||||||||||||||
Sbjct: 60020 ttgttccatttgtgtccata 60001
to top
>gb|AC138928.2| Homo sapiens chromosome 5 clone RP11-674O19, complete sequence
          Length = 166615

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 164004 ttgttccatttgtgtccata 164023
to top
>gb|AC145141.2| Homo sapiens chromosome 5 clone RP11-1364K7, complete sequence
          Length = 163257

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   ttgttccatttgtgtccata 521
             ||||||||||||||||||||
Sbjct: 28073 ttgttccatttgtgtccata 28092
to top
>gb|AC145144.2| Homo sapiens chromosome 5 clone RP11-1432L1, complete sequence
          Length = 211638

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   ttgttccatttgtgtccata 521
             ||||||||||||||||||||
Sbjct: 31118 ttgttccatttgtgtccata 31099
to top
>gb|AC145102.2| Homo sapiens chromosome 5 clone RP11-696L12, complete sequence
          Length = 186481

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 502  ttgttccatttgtgtccata 521
            ||||||||||||||||||||
Sbjct: 2612 ttgttccatttgtgtccata 2593
to top
>emb|AL590240.5| Human DNA sequence from clone RP11-266I3 on chromosome X Contains a
              likely ortholog of mouse hepatoma-derived growth factor
              related protein 3 pseudogene (HDGFRP3), a novel protein
              similar to PAGE-5 protein (LOC203569), a novel protein
              similar to PAGE-5 protein (LOC139795), gene FLJ20434, a
              cytochrome c oxidase I (MTCO1) pseudogene, a G antigen,
              family D pseudogene and a CpG island, complete sequence
          Length = 130005

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     ataatgtacattttcttaca 115
              ||||||||||||||||||||
Sbjct: 124731 ataatgtacattttcttaca 124712
to top
>emb|AL445226.9| Human DNA sequence from clone RP11-261F2 on chromosome 13, complete
             sequence
          Length = 56239

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    aatgtacattttcttacaga 117
             ||||||||||||||||||||
Sbjct: 53298 aatgtacattttcttacaga 53279
to top
>gb|AC139507.2| Homo sapiens chromosome 5 clone RP11-937A6, complete sequence
          Length = 175073

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 156069 ttgttccatttgtgtccata 156088
to top
>gb|AC139463.2| Homo sapiens chromosome 5 clone RPCI-11_1264N5, complete sequence
          Length = 202179

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   ttgttccatttgtgtccata 521
             ||||||||||||||||||||
Sbjct: 79778 ttgttccatttgtgtccata 79797
to top
>gb|AC138911.2| Homo sapiens chromosome 5 clone RP11-618O22, complete sequence
          Length = 191992

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 160536 ttgttccatttgtgtccata 160555
to top
>emb|AL133255.14| Human DNA sequence from clone RP11-239L20 on chromosome 6 Contains the
              gene for a novel protein similar to spinal muscular atrophy
              region protein SMA3, a beta glucuronidase (GUSB)
              pseudogene, a pseudogene similar to nuclear envelope pore
              membrane protein POM121 (NUP121) ESTs, STSs, GSSs and a CpG
              island, complete sequence
          Length = 152782

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 132162 ttgttccatttgtgtccata 132181
to top
>emb|AL031286.2|HS681J21 Human DNA sequence from clone RP4-681J21 on chromosome 1q23.2-24.3
             Contains the 5' end of a novel gene, the 5' end of the
             gene for expressed in hematopoietic cells (heart, liver)
             (HLL) and a CpG island, complete sequence
          Length = 68770

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    agataatgtacattttctta 113
             ||||||||||||||||||||
Sbjct: 18244 agataatgtacattttctta 18225
to top
>gb|AC139492.2| Homo sapiens chromosome 5 clone RP11-842C12, complete sequence
          Length = 184826

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   ttgttccatttgtgtccata 521
             ||||||||||||||||||||
Sbjct: 51691 ttgttccatttgtgtccata 51710
to top
>emb|AL009030.15|HS28I24 Human DNA sequence from clone RP1-28I24 on chromosome 5 Contains the 5'
              end of the spinal muscular dystrophy region gene (SMA3),
              two beta-glucuronidase pseudogenes and two novel
              pseudogenes containing four membrane protein-like protein
              repeats, one CpG islands, ESTs, GSSs and STSs, complete
              sequence
          Length = 222252

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 197486 ttgttccatttgtgtccata 197467



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 123842 ttgttccatttgtgtccata 123861
to top
>gb|AC182492.2| Pan troglodytes BAC clone CH251-294F23 from chromosome 5, complete
             sequence
          Length = 179551

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   ttgttccatttgtgtccata 521
             ||||||||||||||||||||
Sbjct: 45899 ttgttccatttgtgtccata 45880
to top
>gb|AC139500.2| Homo sapiens chromosome 5 clone RP11-864E4, complete sequence
          Length = 194350

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 139860 ttgttccatttgtgtccata 139879
to top
>gb|AC138850.2| Homo sapiens chromosome 5 clone RP11-1308P14, complete sequence
          Length = 188885

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 180891 ttgttccatttgtgtccata 180872
to top
>gb|AC140175.2| Homo sapiens chromosome 5 clone RP11-833G1, complete sequence
          Length = 161671

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 130205 ttgttccatttgtgtccata 130224
to top
>gb|AC108108.2| Homo sapiens chromosome 5 clone RP11-260M21, complete sequence
          Length = 173597

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 173001 ttgttccatttgtgtccata 172982



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   ttgttccatttgtgtccata 521
             ||||||||||||||||||||
Sbjct: 99303 ttgttccatttgtgtccata 99322
to top
>gb|AC138951.2| Homo sapiens chromosome 5 clone RP11-823P9, complete sequence
          Length = 223346

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 220727 ttgttccatttgtgtccata 220746
to top
>gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene region, part 1 of 2
          Length = 180000

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 378    tcctggagatggtgccggaccgca 401
              |||||||||||||| |||||||||
Sbjct: 174068 tcctggagatggtggcggaccgca 174091
to top
>gb|AC138821.2| Homo sapiens chromosome 5 clone RP11-1104E16, complete sequence
          Length = 182236

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   ttgttccatttgtgtccata 521
             ||||||||||||||||||||
Sbjct: 85973 ttgttccatttgtgtccata 85992
to top
>gb|AC093274.4| Homo sapiens chromosome 5 clone RP11-374A4, complete sequence
          Length = 186608

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 159757 ttgttccatttgtgtccata 159738
to top
>gb|AC131392.2| Homo sapiens chromosome 5 clone RP11-98J23, complete sequence
          Length = 154803

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    ttgttccatttgtgtccata 521
              ||||||||||||||||||||
Sbjct: 118533 ttgttccatttgtgtccata 118552
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 378     tcctggagatggtgccggaccgca 401
               |||||||||||||| |||||||||
Sbjct: 2052553 tcctggagatggtggcggaccgca 2052576
to top
>gb|AY785435.1| Uncultured bacterium clone HZ04 genomic sequence
          Length = 1433

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 348 tcgtgcagcagcggcgacgc 367
           ||||||||||||||||||||
Sbjct: 238 tcgtgcagcagcggcgacgc 257
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 341     gatcacgtcgtgcagcagcg 360
               ||||||||||||||||||||
Sbjct: 2337289 gatcacgtcgtgcagcagcg 2337308
to top
>gb|AY111046.1| Zea mays CL31773_1 mRNA sequence
          Length = 549

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 acgacgccgtcgaagaaatc 178
           ||||||||||||||||||||
Sbjct: 498 acgacgccgtcgaagaaatc 479
to top
>gb|AC130537.4| Mus musculus BAC clone RP23-412D3 from 8, complete sequence
          Length = 194088

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 471   acatctctgatgctaatgtt 490
             ||||||||||||||||||||
Sbjct: 83277 acatctctgatgctaatgtt 83258
to top
>dbj|AP005329.3| Homo sapiens genomic DNA, chromosome 18 clone:RP13-270P17, complete
             sequence
          Length = 178812

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   atgtccctcagtgtgatcac 238
             ||||||||||||||||||||
Sbjct: 56361 atgtccctcagtgtgatcac 56380
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 248     gtcccccttgtcgtcgacca 267
               ||||||||||||||||||||
Sbjct: 1956409 gtcccccttgtcgtcgacca 1956428
to top
>gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosome 17, complete
             sequence
          Length = 180189

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 402   gtaaggaaatccttggctgagatt 425
             ||||||||||||| ||||||||||
Sbjct: 43333 gtaaggaaatcctgggctgagatt 43310


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,591,735
Number of Sequences: 3902068
Number of extensions: 4591735
Number of successful extensions: 85676
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85388
Number of HSP's gapped (non-prelim): 287
length of query: 544
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 521
effective length of database: 17,143,297,704
effective search space: 8931658103784
effective search space used: 8931658103784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top