ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MIOX_ORYSA (Q5Z8T3) Probable inositol oxygenase (EC 1.13.99.1) (... 244 1e-64
2MIOX5_ARATH (Q9FJU4) Inositol oxygenase 5 (EC 1.13.99.1) (Myo-in... 234 9e-62
3MIOX4_ARATH (Q8H1S0) Inositol oxygenase 4 (EC 1.13.99.1) (Myo-in... 229 4e-60
4MIOX2_ARATH (O82200) Inositol oxygenase 2 (EC 1.13.99.1) (Myo-in... 223 3e-58
5MIOX1_ARATH (Q8L799) Inositol oxygenase 1 (EC 1.13.99.1) (Myo-in... 223 3e-58
6MIOX_BRARE (Q4V8T0) Inositol oxygenase (EC 1.13.99.1) (Myo-inosi... 164 1e-40
7MIOX_PIG (Q8WN98) Inositol oxygenase (EC 1.13.99.1) (Myo-inosito... 144 2e-34
8MIOX_MOUSE (Q9QXN5) Inositol oxygenase (EC 1.13.99.1) (Myo-inosi... 143 3e-34
9MIOX_PONPY (Q5REY9) Inositol oxygenase (EC 1.13.99.1) (Myo-inosi... 139 4e-33
10MIOX_RAT (Q9QXN4) Inositol oxygenase (EC 1.13.99.1) (Myo-inosito... 139 5e-33
11MIOX_HUMAN (Q9UGB7) Inositol oxygenase (EC 1.13.99.1) (Myo-inosi... 139 7e-33
12SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1... 32 0.89
13CSK_CHICK (P41239) Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-... 32 0.89
14TOP1_RICPR (Q9ZDK2) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi... 30 3.4
15RIN2_HUMAN (Q8WYP3) Ras and Rab interactor 2 (Ras interaction/in... 30 4.4
16GRPE_THEMA (Q9WZV4) Protein grpE (HSP-70 cofactor) 30 4.4
17Y1054_METJA (Q58454) Hypothetical protein MJ1054 (EC 1.1.1.-) [C... 29 7.6

>MIOX_ORYSA (Q5Z8T3) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol|
           oxygenase)
          Length = 308

 Score =  244 bits (622), Expect = 1e-64
 Identities = 111/122 (90%), Positives = 115/122 (94%)
 Frame = -2

Query: 546 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 367
           NPDY NP+ NTKFG YSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY
Sbjct: 187 NPDYLNPKLNTKFGAYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 246

Query: 366 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 187
           PLHKHGAY HLMN+EDKENLKWL VFNKYDLYSKS+ RIDVEKVKPYYMSLIEKYFP KL
Sbjct: 247 PLHKHGAYMHLMNDEDKENLKWLRVFNKYDLYSKSNERIDVEKVKPYYMSLIEKYFPAKL 306

Query: 186 KW 181
           +W
Sbjct: 307 RW 308



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>MIOX5_ARATH (Q9FJU4) Inositol oxygenase 5 (EC 1.13.99.1) (Myo-inositol|
           oxygenase 5) (AtMIOX5)
          Length = 314

 Score =  234 bits (598), Expect = 9e-62
 Identities = 104/122 (85%), Positives = 115/122 (94%)
 Frame = -2

Query: 546 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 367
           NPD++NP++NTK G+YSEGCGL+NVLMSWGHDDYMYLVAKEN +TLPS GLFIIRYHSFY
Sbjct: 193 NPDFNNPKYNTKAGIYSEGCGLENVLMSWGHDDYMYLVAKENGSTLPSPGLFIIRYHSFY 252

Query: 366 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 187
           PLHK GAYTHLMNEEDKENLKWLHVFNKYDLYSKS V ++VEKVKPYYMSLI+KYFPE L
Sbjct: 253 PLHKAGAYTHLMNEEDKENLKWLHVFNKYDLYSKSKVHVNVEKVKPYYMSLIKKYFPENL 312

Query: 186 KW 181
           +W
Sbjct: 313 RW 314



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>MIOX4_ARATH (Q8H1S0) Inositol oxygenase 4 (EC 1.13.99.1) (Myo-inositol|
           oxygenase 4) (AtMIOX4)
          Length = 317

 Score =  229 bits (584), Expect = 4e-60
 Identities = 102/122 (83%), Positives = 111/122 (90%)
 Frame = -2

Query: 546 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 367
           NPD+HN  +NTK G+YSEGCGL+NV+MSWGHDDYMYLVAKEN +TLPSAG FIIRYHSFY
Sbjct: 196 NPDFHNETYNTKNGIYSEGCGLNNVMMSWGHDDYMYLVAKENGSTLPSAGQFIIRYHSFY 255

Query: 366 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 187
           PLH  G YTHLMNEEDKENLKWLHVFNKYDLYSKS V +DVEKVKPYYMSLI+KYFPE L
Sbjct: 256 PLHTAGEYTHLMNEEDKENLKWLHVFNKYDLYSKSKVHVDVEKVKPYYMSLIKKYFPENL 315

Query: 186 KW 181
           +W
Sbjct: 316 RW 317



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>MIOX2_ARATH (O82200) Inositol oxygenase 2 (EC 1.13.99.1) (Myo-inositol|
           oxygenase 2) (AtMIOX2)
          Length = 317

 Score =  223 bits (568), Expect = 3e-58
 Identities = 100/122 (81%), Positives = 112/122 (91%)
 Frame = -2

Query: 546 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 367
           N D +NP++NTK GVY+EGCGLDNVLMSWGHDDYMYLVAK+N TTLP AGLFIIRYHSFY
Sbjct: 196 NHDINNPKYNTKNGVYTEGCGLDNVLMSWGHDDYMYLVAKKNGTTLPHAGLFIIRYHSFY 255

Query: 366 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 187
           PLHK GAYTHLMN+ED+++LKWLHVFNKYDLYSKS V +DVE+VKPYY+SLI KYFP KL
Sbjct: 256 PLHKAGAYTHLMNDEDRDDLKWLHVFNKYDLYSKSKVLVDVEQVKPYYISLINKYFPAKL 315

Query: 186 KW 181
           KW
Sbjct: 316 KW 317



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>MIOX1_ARATH (Q8L799) Inositol oxygenase 1 (EC 1.13.99.1) (Myo-inositol|
           oxygenase 1) (AtMIOX1)
          Length = 311

 Score =  223 bits (568), Expect = 3e-58
 Identities = 98/122 (80%), Positives = 110/122 (90%)
 Frame = -2

Query: 546 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 367
           NPDY NP +N+K+G+Y+EGCGLDNVLMSWGHDDYMYLVAKEN+TTLPSAGLFIIRYHSFY
Sbjct: 190 NPDYDNPSYNSKYGIYTEGCGLDNVLMSWGHDDYMYLVAKENQTTLPSAGLFIIRYHSFY 249

Query: 366 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 187
            LHK  AY HLMN ED+EN+KWL VFNKYDLYSKS VR++VE+VKPYY+SL  KYFP KL
Sbjct: 250 ALHKSEAYKHLMNNEDRENMKWLKVFNKYDLYSKSKVRVNVEEVKPYYLSLTNKYFPSKL 309

Query: 186 KW 181
           KW
Sbjct: 310 KW 311



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>MIOX_BRARE (Q4V8T0) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
          Length = 278

 Score =  164 bits (416), Expect = 1e-40
 Identities = 72/122 (59%), Positives = 92/122 (75%)
 Frame = -2

Query: 546 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 367
           NPD  NP  NT+FG+Y   CGLD VLMSWGHD+Y+Y V K NK T+P  GL++IR+HSFY
Sbjct: 157 NPDGKNPAPNTEFGIYEPQCGLDKVLMSWGHDEYLYRVMKFNKCTIPEEGLYMIRFHSFY 216

Query: 366 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 187
           P H +G Y HL NE+D++ L W+  FNK+DLY+KS+   DVE++KPYY SLI+KY P  L
Sbjct: 217 PWHSNGDYMHLCNEKDQQMLPWVKEFNKFDLYTKSTELPDVERLKPYYQSLIDKYCPGVL 276

Query: 186 KW 181
           +W
Sbjct: 277 QW 278



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>MIOX_PIG (Q8WN98) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
           (Aldehyde reductase-like 6)
          Length = 282

 Score =  144 bits (363), Expect = 2e-34
 Identities = 63/122 (51%), Positives = 83/122 (68%)
 Frame = -2

Query: 546 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 367
           NPD  +P ++T+ G+Y   CGL+N LMSWGHD+YMY + K NK +LP    +IIR+HSFY
Sbjct: 161 NPDLQDPVYSTELGMYQPHCGLENALMSWGHDEYMYQMMKFNKFSLPGEAFYIIRFHSFY 220

Query: 366 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 187
           P H  G Y  L NE+D   L W+  FNK+DLY+K S   DV++++PYY  LI+KY P  L
Sbjct: 221 PWHTGGDYRQLCNEQDLAMLPWVQEFNKFDLYTKGSDMPDVDELRPYYQGLIDKYCPGVL 280

Query: 186 KW 181
            W
Sbjct: 281 CW 282



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>MIOX_MOUSE (Q9QXN5) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
           (Aldehyde reductase-like 6) (Renal-specific
           oxidoreductase)
          Length = 285

 Score =  143 bits (361), Expect = 3e-34
 Identities = 61/122 (50%), Positives = 84/122 (68%)
 Frame = -2

Query: 546 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 367
           NPD  +P ++T+ G+Y   CGL+NVLMSWGHD+Y+Y + K NK +LPS   ++IR+HSFY
Sbjct: 164 NPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMIRFHSFY 223

Query: 366 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 187
           P H  G Y  L +++D + L W+  FNK+DLY+K     DVE ++PYY  LI+KY P  L
Sbjct: 224 PWHTGGDYRQLCSQQDLDMLPWVQEFNKFDLYTKCPDLPDVESLRPYYQGLIDKYCPGTL 283

Query: 186 KW 181
            W
Sbjct: 284 SW 285



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>MIOX_PONPY (Q5REY9) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
          Length = 285

 Score =  139 bits (351), Expect = 4e-33
 Identities = 61/122 (50%), Positives = 81/122 (66%)
 Frame = -2

Query: 546 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 367
           NPD  +P ++T+ G+Y   CGLD VLMSWGHD+YMY V K NK +LP    ++IR+HSFY
Sbjct: 164 NPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFY 223

Query: 366 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 187
           P H    Y  L +++D   L W+  FNK+DLY+K     DV+K++PYY  LI+KY P  L
Sbjct: 224 PWHTGSDYQQLCSQQDLAMLPWVQEFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGIL 283

Query: 186 KW 181
            W
Sbjct: 284 SW 285



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>MIOX_RAT (Q9QXN4) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
           (Aldehyde reductase-like 6) (Renal-specific
           oxidoreductase) (Kidney-specific protein 32)
          Length = 285

 Score =  139 bits (350), Expect = 5e-33
 Identities = 58/122 (47%), Positives = 84/122 (68%)
 Frame = -2

Query: 546 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 367
           NPD  +P ++T+ G+Y   CGL+NVLMSWGHD+Y+Y + K NK +LPS   +++R+HSFY
Sbjct: 164 NPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMVRFHSFY 223

Query: 366 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 187
           P H  G Y  L +++D + L W+  FNK+DLY+K     +V+ ++PYY  LI+KY P  L
Sbjct: 224 PWHTGGDYRQLCSQQDLDMLPWVQEFNKFDLYTKCPDLPEVKSLRPYYQGLIDKYCPGIL 283

Query: 186 KW 181
            W
Sbjct: 284 SW 285



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>MIOX_HUMAN (Q9UGB7) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
           (Aldehyde reductase-like 6) (Renal-specific
           oxidoreductase) (Kidney-specific protein 32)
          Length = 285

 Score =  139 bits (349), Expect = 7e-33
 Identities = 61/122 (50%), Positives = 81/122 (66%)
 Frame = -2

Query: 546 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 367
           NPD  +P ++T+ G+Y   CGLD VLMSWGHD+YMY V K NK +LP    ++IR+HSFY
Sbjct: 164 NPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFY 223

Query: 366 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 187
           P H    Y  L +++D   L W+  FNK+DLY+K     DV+K++PYY  LI+KY P  L
Sbjct: 224 PWHTGRDYQQLCSQQDLAMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGIL 283

Query: 186 KW 181
            W
Sbjct: 284 SW 285



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>SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1 (EC 2.1.1.-)|
           (2'-O-ribose RNA methyltransferase)
           (S-adenosyl-L-methionine-dependent methyltransferase)
          Length = 908

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = -2

Query: 384 RYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEK 205
           R   FY L K   Y        +   K +H+  KYDL SK+   ID+      ++ + EK
Sbjct: 12  RLDKFYRLAKEQGY------RARSAFKLVHLNRKYDLLSKARCCIDLCAAPGGWLQVAEK 65

Query: 204 YFPE 193
           Y P+
Sbjct: 66  YMPK 69



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>CSK_CHICK (P41239) Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-SRC kinase)|
          Length = 450

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
 Frame = -2

Query: 486 GLDNVLMSWGHDDYMYLVAKENKTTL---PSAGLFIIRYHSFYPLHKHGAYTHLMNEEDK 316
           G+   LM W H      + +E    L   P  GLF++R  + YP    G YT  ++ E K
Sbjct: 74  GIKLSLMPWFHGK----ITREQAERLLYPPETGLFLVRESTNYP----GDYTLCVSCEGK 125

Query: 315 ENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKY 202
                  V +   +YS S + ID E      M L+E Y
Sbjct: 126 -------VEHYRIIYSSSKLSIDEEVYFENLMQLVEHY 156



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>TOP1_RICPR (Q9ZDK2) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 776

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = -2

Query: 489 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 310
           C ++NV+M    D  +  +A ENK  L  A   II +  FY +     Y   +++ED+E+
Sbjct: 388 CQMENVIM----DLVIANLASENKEYLAKANGSIIAFDGFYKV-----YRESLDDEDEED 438

Query: 309 LKWL 298
            K L
Sbjct: 439 NKML 442



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>RIN2_HUMAN (Q8WYP3) Ras and Rab interactor 2 (Ras interaction/interference|
           protein 2) (Ras inhibitor JC265) (Ras association domain
           family 4)
          Length = 895

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -2

Query: 318 KENLKWLHVFNKYDL--YSKSSVRIDVEKVKPYYMSLIEKYFPEK 190
           KENL+ +   N  +L  ++ +   +DVEK+K  +M++ + Y PEK
Sbjct: 625 KENLQLVRQRNPQELGVFAPTPDFVDVEKIKVKFMTMQKMYSPEK 669



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>GRPE_THEMA (Q9WZV4) Protein grpE (HSP-70 cofactor)|
          Length = 172

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -2

Query: 345 YTHLMNEEDKENLKWLHVFNKYDLYSKSSV-RIDVEKVKPY 226
           Y  L+N  +KE L  +HV  K+D +   +V R++ E V+ Y
Sbjct: 88  YKKLLNVLEKEGLTKIHVGEKFDPFEHEAVERVETEDVEEY 128



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>Y1054_METJA (Q58454) Hypothetical protein MJ1054 (EC 1.1.1.-) [Contains: Mja|
           UDPGD intein]
          Length = 895

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 21/86 (24%), Positives = 41/86 (47%)
 Frame = -2

Query: 456 HDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYD 277
           +  Y+Y V  EN   + S G+ I   H+ +P         L+ + +  N++ + +    D
Sbjct: 690 YSGYVYSVETENSLLITSYGILI---HNCFPKDVKA----LIKQFENNNIEPI-LIKATD 741

Query: 276 LYSKSSVRIDVEKVKPYYMSLIEKYF 199
           + ++  ++   EK+K YY +L  K F
Sbjct: 742 IVNEEQIKWFFEKIKNYYGNLNGKTF 767


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,762,726
Number of Sequences: 219361
Number of extensions: 1542300
Number of successful extensions: 4301
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4301
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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