Clone Name | rbasd19b21 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CENG3_HUMAN (Q96P47) Centaurin-gamma 3 (ARF-GAP with GTP-binding... | 31 | 2.0 | 2 | RHBT2_MOUSE (Q91V93) Rho-related BTB domain-containing protein 2... | 30 | 4.4 | 3 | FZD8_XENLA (O93274) Frizzled 8 precursor (Frizzled-8) (Fz-8) (Xfz8) | 29 | 9.7 |
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>CENG3_HUMAN (Q96P47) Centaurin-gamma 3 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 3) (AGAP-3) (MR1-interacting protein) (MRIP-1) (CRAM-associated GTPase) (CRAG) Length = 875 Score = 31.2 bits (69), Expect = 2.0 Identities = 22/67 (32%), Positives = 28/67 (41%) Frame = -2 Query: 501 ASPACRHYRSGDR*ASGTCWAGTTLRRRPSGQH*ATCQVTTIPSWSCLQTGARRTACHRC 322 AS A H +R S + WAG RP G H +C V++ WS T H Sbjct: 468 ASSASLH---SERPLSSSAWAGP----RPEGLHQRSCSVSSADQWSEATTSLPPGMQHPA 520 Query: 321 GHPSESL 301 P+E L Sbjct: 521 SGPAEVL 527
>RHBT2_MOUSE (Q91V93) Rho-related BTB domain-containing protein 2 (Deleted in| breast cancer 2 gene protein homolog) Length = 728 Score = 30.0 bits (66), Expect = 4.4 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 Query: 464 GELRGPAGLGQP*EEGHQDSTEQH 393 GEL GP+G G P E H+ EQH Sbjct: 303 GELGGPSGSGGPRPEDHRSHPEQH 326
>FZD8_XENLA (O93274) Frizzled 8 precursor (Frizzled-8) (Fz-8) (Xfz8)| Length = 581 Score = 28.9 bits (63), Expect = 9.7 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Frame = +1 Query: 421 SSQGCPSPAGPRSSPIP*AVVPAGR------RSRTLARWCSSWCRCR 543 + Q +P+ P P VP GR RSR+ A C S C+CR Sbjct: 148 TEQTTAAPSHPEPPKPPARSVPKGRTRVEPPRSRSRATGCESGCQCR 194 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,518,977 Number of Sequences: 219361 Number of extensions: 1672927 Number of successful extensions: 4748 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4293 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4745 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)