ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd19b20 |
|---|---|
| Clone Library Name | barley_pub |
>HTH_ARATH (Q9S746) Protein HOTHEAD precursor (Protein ADHESION OF CALYX| EDGES) Length = 594 Score = 179 bits (454), Expect = 5e-45 Identities = 86/141 (60%), Positives = 105/141 (74%) Frame = -3 Query: 585 FSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEMERVLNMSVQANVNLIPKHTNTT 406 F HP DL RCV I+ + K++ +N F + T + ++L++SV+AN+NL PK N T Sbjct: 455 FKHPVDLQRCVEAIRLVSKVVTSNRFLNYTQCDK-QNVHKMLSLSVKANINLRPKQLNDT 513 Query: 405 ESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQATVM 226 +S+ QFCKDTV+TIWHYHGGC VGKVV +VLGV LRV+DGSTF SPGTNPQAT+M Sbjct: 514 KSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLGVDRLRVIDGSTFDESPGTNPQATMM 573 Query: 225 MMGRYFGVKILRERLGPAAGV 163 MMGRY GVKILRERLG AGV Sbjct: 574 MMGRYMGVKILRERLGNKAGV 594
>MDL1_PRUSE (P52706) (R)-mandelonitrile lyase 1 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 1) ((R)-oxynitrilase 1) Length = 563 Score = 117 bits (294), Expect = 2e-26 Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 1/135 (0%) Frame = -3 Query: 585 FSHPQDLSRCVYGIKTIEKILKTNSFA-HLTPDGAGYEMERVLNMSVQANVNLIPKHTNT 409 +S+P DLS CV G+K I ++L T++ + D G E +L + +PK Sbjct: 417 YSNPTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGIEGFNILGIP-------LPKDQTD 469 Query: 408 TESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQATV 229 + E FC+++V + WHYHGGC VGKV+D RV G+ LRVVDGSTF +P ++PQ Sbjct: 470 DAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGIDALRVVDGSTFPYTPASHPQGFY 529 Query: 228 MMMGRYFGVKILRER 184 +M+GRY G+KIL+ER Sbjct: 530 LMLGRYVGIKILQER 544
>MDL3_PRUSE (P52707) (R)-mandelonitrile lyase 3 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 3) ((R)-oxynitrilase 3) Length = 573 Score = 111 bits (277), Expect = 2e-24 Identities = 54/135 (40%), Positives = 85/135 (62%), Gaps = 1/135 (0%) Frame = -3 Query: 585 FSHPQDLSRCVYGIKTIEKILKTNSFA-HLTPDGAGYEMERVLNMSVQANVNLIPKHTNT 409 +S+ DLS CV G+K + ++L T++ + D G + +L + +P++ Sbjct: 418 YSNLTDLSHCVSGMKKLGEVLSTDALEPYKVEDLPGIDGFNILGIP-------LPENQTD 470 Query: 408 TESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQATV 229 + E FC+++V + WHYHGGC VGKV+D RV G++ LRVVDGSTF +P ++PQ Sbjct: 471 DAAFETFCRESVASYWHYHGGCLVGKVLDDGFRVTGINALRVVDGSTFPSTPASHPQGFY 530 Query: 228 MMMGRYFGVKILRER 184 +M+GRY G++IL+ER Sbjct: 531 LMLGRYMGIQILQER 545
>MDL2_PRUSE (O50048) (R)-mandelonitrile lyase 2 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 2) ((R)-oxynitrilase 2) Length = 576 Score = 110 bits (274), Expect = 4e-24 Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Frame = -3 Query: 585 FSHPQDLSRCVYGIKTIEKILKTNSFA-HLTPDGAGYEMERVLNMSVQANVNLIPKHTNT 409 +S+ DL+ CV G+K I + L +++ + D G E +L + +P++ Sbjct: 419 YSNTTDLAHCVSGMKKIGEFLSSDALKPYKVEDLPGIEGFDILGIP-------LPENQTD 471 Query: 408 TESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQATV 229 + E FC++ V + WHYHGGC VG+V+D RV G++ LRVVDGSTF +P ++PQ Sbjct: 472 DAAFETFCREAVASYWHYHGGCLVGEVLDDDFRVTGINALRVVDGSTFPSTPASHPQGFY 531 Query: 228 MMMGRYFGVKILRERL 181 +M+GRY G KIL+ERL Sbjct: 532 LMLGRYMGTKILQERL 547
>MDL4_PRUSE (O82784) (R)-mandelonitrile lyase 4 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 4) ((R)-oxynitrilase 4) Length = 574 Score = 109 bits (272), Expect = 7e-24 Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 1/134 (0%) Frame = -3 Query: 582 SHPQDLSRCVYGIKTIEKILKTNSFA-HLTPDGAGYEMERVLNMSVQANVNLIPKHTNTT 406 S P DL+ CV G+K I L T++ + D G + +L +P++ Sbjct: 420 SDPVDLTHCVSGMKKIGVFLSTDALKPYKVDDLPGIDGFNILGTP-------LPENQTDD 472 Query: 405 ESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQATVM 226 + E+FC+DTV + WHYHGG VGKV+D RV G++ LRVVDGSTF +P ++PQ + Sbjct: 473 AAFEKFCRDTVASYWHYHGGAIVGKVIDGNFRVTGINALRVVDGSTFPATPASHPQGFYL 532 Query: 225 MMGRYFGVKILRER 184 M+GRY G KI++ER Sbjct: 533 MLGRYVGTKIVQER 546
>MDL1_PRUDU (O24243) (R)-mandelonitrile lyase 1 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 1) ((R)-oxynitrilase 1) Length = 559 Score = 103 bits (257), Expect = 4e-22 Identities = 55/135 (40%), Positives = 81/135 (60%), Gaps = 1/135 (0%) Frame = -3 Query: 585 FSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEMERVLNMSVQANVNL-IPKHTNT 409 +S+ DL+ CV G+K + +L+T + L P Y+ VL + + + +P++ Sbjct: 418 YSNSTDLANCVSGMKKLGDLLRTKA---LEP----YKARDVLGIDGFNYLGVPLPENQTD 470 Query: 408 TESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQATV 229 S E FC D V + WHYHGG VGKV+D RV+G+ LRVVD STF P ++PQ Sbjct: 471 DASFETFCLDNVASYWHYHGGSLVGKVLDDSFRVMGIKALRVVDASTFPYEPNSHPQGFY 530 Query: 228 MMMGRYFGVKILRER 184 +M+GRY G++IL+ER Sbjct: 531 LMLGRYVGLQILQER 545
>BETA_RHILO (Q985M5) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 550 Score = 48.1 bits (113), Expect = 2e-05 Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 7/90 (7%) Frame = -3 Query: 420 HTNTTESLEQFCKDTVITIWHYHGGCHVGK------VVDQQHRVLGVSGLRVVDGSTFSR 259 H + + L+ F +D + +H G C +G+ VVD + RV+GV GLRV D S F R Sbjct: 446 HVQSDDDLDVFIRDHAESAYHPCGTCKMGRADDVTSVVDPECRVIGVDGLRVADSSIFPR 505 Query: 258 SPGTNPQATVMMMGRYFGVKIL-RERLGPA 172 N A +M G IL R L P+ Sbjct: 506 VTNGNLNAPSIMTGEKASDHILGRTPLAPS 535
>BETA_CHRSL (Q9L4K0) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 558 Score = 47.0 bits (110), Expect = 4e-05 Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 4/85 (4%) Frame = -3 Query: 405 ESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQ 238 E L+ F K T +H G C +G+ V D Q RV G+ GLRVVD S F P N Sbjct: 460 EELDNFVKQHAETAYHPCGSCRMGEGDMAVTDAQGRVHGLEGLRVVDASLFPVIPTGNLN 519 Query: 237 ATVMMMGRYFGVKILRERLGPAAGV 163 A +M+ +I P A V Sbjct: 520 APTIMLAEKIADRIRGREPLPRASV 544
>BETA_BRUSU (Q8G1Z8) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 549 Score = 46.6 bits (109), Expect = 5e-05 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Frame = -3 Query: 420 HTNTTESLEQFCKDTVITIWHYHGGCHVGKV------VDQQHRVLGVSGLRVVDGSTFSR 259 H T + ++ F ++ V + +H G C +G V VD + RV+GV GLRV D S F R Sbjct: 445 HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPR 504 Query: 258 SPGTNPQATVMMMG 217 N +M+G Sbjct: 505 ITNGNLNGPSIMVG 518
>BETA_BRUME (Q8YFY2) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 549 Score = 46.6 bits (109), Expect = 5e-05 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Frame = -3 Query: 420 HTNTTESLEQFCKDTVITIWHYHGGCHVGKV------VDQQHRVLGVSGLRVVDGSTFSR 259 H T + ++ F ++ V + +H G C +G V VD + RV+GV GLRV D S F R Sbjct: 445 HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPR 504 Query: 258 SPGTNPQATVMMMG 217 N +M+G Sbjct: 505 ITNGNLNGPSIMVG 518
>NINAG_DROME (Q9VGP2) Neither inactivation nor afterpotential protein G| precursor (EC 1.-.-.-) Length = 581 Score = 45.1 bits (105), Expect = 2e-04 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 6/140 (4%) Frame = -3 Query: 582 SHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEMERVLNMSVQANVNLIPKHTN--- 412 S +D++ + I++ +++ + +FA L P R+ VQ N P + Sbjct: 444 SSEEDVACTISAIRSAVELVNSTAFAALHP--------RIHWPRVQECSNFGPFERDFFD 495 Query: 411 ---TTESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGVSGLRVVDGSTFSRSPGTNP 241 + + LE + + H G C +G VVD Q R+ GVS +RVVD S R NP Sbjct: 496 NRPSDQYLECLMRHVGLGSHHPGGTCALGSVVDSQLRLKGVSNVRVVDASVLPRPISGNP 555 Query: 240 QATVMMMGRYFGVKILRERL 181 + V+ + IL+ L Sbjct: 556 NSVVVAIALRAASWILKSEL 575
>BETA_ECO57 (Q8X6C6) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 562 Score = 44.7 bits (104), Expect = 2e-04 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%) Frame = -3 Query: 411 TTESLEQFCKDTVITIWHYHGGCHVG----KVVDQQHRVLGVSGLRVVDGSTFSRSPGTN 244 T E L++F ++ T +H G C +G VVD + RV G+ GLRVVD S + N Sbjct: 456 TDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGN 515 Query: 243 PQATVMMMG 217 AT +M+G Sbjct: 516 LNATTIMIG 524
>BETA_ECOLI (P17444) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 556 Score = 44.7 bits (104), Expect = 2e-04 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%) Frame = -3 Query: 411 TTESLEQFCKDTVITIWHYHGGCHVG----KVVDQQHRVLGVSGLRVVDGSTFSRSPGTN 244 T E L++F ++ T +H G C +G VVD + RV G+ GLRVVD S + N Sbjct: 456 TDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGN 515 Query: 243 PQATVMMMG 217 AT +M+G Sbjct: 516 LNATTIMIG 524
>BETA_ECOL6 (Q8FKI9) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 556 Score = 44.3 bits (103), Expect = 3e-04 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%) Frame = -3 Query: 411 TTESLEQFCKDTVITIWHYHGGCHVG----KVVDQQHRVLGVSGLRVVDGSTFSRSPGTN 244 T E L++F ++ T +H G C +G VVD + RV G+ GLRVVD S + N Sbjct: 456 TDEQLDEFVRNHAETAFHPCGTCKMGYDEMAVVDGEGRVHGLEGLRVVDASIMPQIITGN 515 Query: 243 PQATVMMMG 217 AT +M+G Sbjct: 516 LNATTIMIG 524
>BETA_AGRT5 (Q8UH55) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 549 Score = 42.0 bits (97), Expect = 0.001 Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 6/128 (4%) Frame = -3 Query: 582 SHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEMERVLNMSVQANVNLIPKHTNTTE 403 SHP+D + + ++ +I +F D G E++ N+ T E Sbjct: 408 SHPEDWEKFRHCVRLTREIFGQKAF----DDFRGPEIQPGENIE-------------TDE 450 Query: 402 SLEQFCKDTVITIWHYHGGCHVGK------VVDQQHRVLGVSGLRVVDGSTFSRSPGTNP 241 ++ F ++ + + +H G C +G VVD + RV+GV GLRV D S F N Sbjct: 451 QIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVEGLRVADSSIFPHVTYGNL 510 Query: 240 QATVMMMG 217 +M G Sbjct: 511 NGPSIMTG 518
>CHOD_STRS0 (P12676) Cholesterol oxidase precursor (EC 1.1.3.6) (CHOD)| Length = 546 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/59 (35%), Positives = 29/59 (49%) Frame = -3 Query: 363 WHYHGGCHVGKVVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQATVMMMGRYFGVKILRE 187 +H GGC +GK D RV G L V DGS S G NP T+ + +I+++ Sbjct: 483 YHPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQ 541
>BETA_RHIME (P54223) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 549 Score = 41.2 bits (95), Expect = 0.002 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%) Frame = -3 Query: 411 TTESLEQFCKDTVITIWHYHGGCHVGK------VVDQQHRVLGVSGLRVVDGSTFSRSPG 250 T E ++ F ++ + + +H G C +G VVD + RV+GV GLRV D S F Sbjct: 448 TDEEIDGFLREHLESAYHPCGTCKMGAKDDPMAVVDPETRVIGVDGLRVADSSIFPHITY 507 Query: 249 TNPQATVMMMG 217 N A +M G Sbjct: 508 GNLNAPSIMTG 518
>BETA_PSEPK (Q88CW6) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 565 Score = 40.4 bits (93), Expect = 0.004 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Frame = -3 Query: 411 TTESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGVSGLRVVDGSTFSRSPGTN 244 T E L++F ++ T +H C +G VVD + RV G+ GLRVVD S N Sbjct: 458 TDEQLDKFIREHAETAFHPSCSCKMGTDDMAVVDGEGRVHGMKGLRVVDASIMPLIITGN 517 Query: 243 PQATVMMMGRYFGVKI 196 AT +M+ KI Sbjct: 518 LNATTIMIAEKISDKI 533
>PNO_MICLT (Q9AJD6) Pyridoxine 4-oxidase (EC 1.1.3.12)| Length = 506 Score = 40.0 bits (92), Expect = 0.005 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%) Frame = -3 Query: 489 GAGYEMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTVITIWHYHGGCHVGK----VVD 322 GA E+ ++ + ++PK ++ ++ F VIT H G C +GK VVD Sbjct: 404 GAAREIGHRPELAEWRDHEILPKSLAASQDIDTFIAKAVITHHHPSGTCRMGKDEMSVVD 463 Query: 321 QQHRVLGVSGLRVVDGS 271 R+ G+ L VVDGS Sbjct: 464 ADLRLRGLDNLYVVDGS 480
>BETA_YERPE (Q8ZGW0) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 567 Score = 39.7 bits (91), Expect = 0.007 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Frame = -3 Query: 405 ESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQ 238 + L+ F ++ T +H C +G VVD Q RV GV GLRVVD S + N Sbjct: 458 DELDAFIREHAETAYHPSCSCKMGDDKMAVVDGQGRVHGVQGLRVVDASIMPQIITGNLN 517 Query: 237 ATVMMMGRYFGVKI 196 AT +M+ +I Sbjct: 518 ATTIMIAEKIADRI 531
>Y4NJ_RHISN (P55582) Hypothetical GMC-type oxidoreductase y4nJ| Length = 505 Score = 39.7 bits (91), Expect = 0.007 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Frame = -3 Query: 384 KDTVITIWHYHGGCHVGK-----VVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQATVMMM 220 K T + H C G+ VD RV GV L V DGS +PG NPQ T+M + Sbjct: 423 KATNLMTIHLFSTCPPGEHRDACAVDSYGRVRGVENLFVADGSVIPEAPGVNPQMTIMAL 482
>BETA_PSEAE (Q9HTJ2) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 561 Score = 38.9 bits (89), Expect = 0.011 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Frame = -3 Query: 399 LEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQAT 232 L++F ++ T +H C +G VVD Q RV G+ GLRVVD S N AT Sbjct: 462 LDEFIRNHAETAFHPSCSCKMGSDDMAVVDGQGRVHGMEGLRVVDASIMPLIITGNLNAT 521 Query: 231 VMMMGRYFGVKI 196 +MM +I Sbjct: 522 TIMMAEKIADRI 533
>BETA_XANAC (Q8PPG8) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 556 Score = 38.9 bits (89), Expect = 0.011 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Frame = -3 Query: 411 TTESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGVSGLRVVDGSTFSRSPGTN 244 T L+ F + T +H C +G VVD Q RV G+ GLRV+D S R N Sbjct: 458 TDAELDAFVRSRAETAYHPSCSCAMGTDAMAVVDGQGRVHGMEGLRVIDASIMPRIITGN 517 Query: 243 PQATVMMM 220 AT +M+ Sbjct: 518 LNATTIMI 525
>BETA_PSESM (Q88AE7) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 568 Score = 38.1 bits (87), Expect = 0.019 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%) Frame = -3 Query: 405 ESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQ 238 E+L+QF ++ T +H C +G VVD Q RV G+ LRVVD S N Sbjct: 462 EALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVHGMQNLRVVDASIMPIITTGNLN 521 Query: 237 ATVMMMGRYFGVKI 196 A +M+ KI Sbjct: 522 APTIMIAEKIADKI 535
>BETA_XANCP (Q8P5D7) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 556 Score = 38.1 bits (87), Expect = 0.019 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Frame = -3 Query: 411 TTESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGVSGLRVVDGSTFSRSPGTN 244 T L+ F + T +H C +G VVD Q RV G+ GLRV+D S R N Sbjct: 458 TDAELDAFVRARAETAYHPSCSCAMGTDDMAVVDGQGRVHGMEGLRVIDASIMPRIITGN 517 Query: 243 PQATVMMM 220 AT +M+ Sbjct: 518 LNATTIMI 525
>YTH2_RHOER (P46371) Hypothetical GMC-type oxidoreductase in thcA 5'region| (ORF2) Length = 493 Score = 37.7 bits (86), Expect = 0.025 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Frame = -3 Query: 405 ESLEQFCKDTVITIWHYHGGCHVGK------VVDQQHRVLGVSGLRVVDGSTFSRSPGTN 244 E +++ + + T H G C +G VVD + RV+G GL +VD S P Sbjct: 414 EYTDEWVESRLGTSLHMSGSCVMGAESDPFAVVDDRCRVIGAQGLSIVDTSILPTIPTRG 473 Query: 243 PQATVMMM 220 P AT +M+ Sbjct: 474 PHATAVMV 481
>Y1310_MYCBO (P64264) Hypothetical GMC-type oxidoreductase Mb1310| Length = 528 Score = 36.6 bits (83), Expect = 0.055 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 8/79 (10%) Frame = -3 Query: 429 IPKHTNTTE----SLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGVSGLRVVDG 274 I + N+TE +LE T++H G C +G VVD Q RV GV GLRV D Sbjct: 441 IARPRNSTELDEATLELALATCSHTLYHPMGTCRMGSDEASVVDPQLRVRGVDGLRVADA 500 Query: 273 STFSRSPGTNPQATVMMMG 217 S + + A +++G Sbjct: 501 SVMPSTVRGHTHAPSVLIG 519
>Y1279_MYCTU (P64263) Hypothetical GMC-type oxidoreductase Rv1279/MT1316| Length = 528 Score = 36.6 bits (83), Expect = 0.055 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 8/79 (10%) Frame = -3 Query: 429 IPKHTNTTE----SLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGVSGLRVVDG 274 I + N+TE +LE T++H G C +G VVD Q RV GV GLRV D Sbjct: 441 IARPRNSTELDEATLELALATCSHTLYHPMGTCRMGSDEASVVDPQLRVRGVDGLRVADA 500 Query: 273 STFSRSPGTNPQATVMMMG 217 S + + A +++G Sbjct: 501 SVMPSTVRGHTHAPSVLIG 519
>CHDH_HUMAN (Q8NE62) Choline dehydrogenase, mitochondrial precursor (EC| 1.1.99.1) (CHD) (CDH) Length = 594 Score = 36.6 bits (83), Expect = 0.055 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 6/73 (8%) Frame = -3 Query: 420 HTNTTESLEQFCKDTVITIWHYHGGCHVGK------VVDQQHRVLGVSGLRVVDGSTFSR 259 H + + ++ F + + +H C +G+ VVD Q RVLGV LRVVD S Sbjct: 491 HIQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVVDASIMPS 550 Query: 258 SPGTNPQATVMMM 220 N A +M+ Sbjct: 551 MVSGNLNAPTIMI 563
>CDH_PHACH (Q01738) Cellobiose dehydrogenase precursor (EC 1.1.99.18) (CDH)| (Cellobiose-quinone oxidoreductase) Length = 773 Score = 36.2 bits (82), Expect = 0.072 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 12/104 (11%) Frame = -3 Query: 450 VQANVNLIPKHT----NTTESLEQFCK---DTVITIWHYHGGCHVGK-----VVDQQHRV 307 V +N+ IP T + T++LE++ + H+ +G VVD +V Sbjct: 670 VVSNIGSIPGLTMITPDVTQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQSAVVDSNVKV 729 Query: 306 LGVSGLRVVDGSTFSRSPGTNPQATVMMMGRYFGVKILRERLGP 175 G + L +VD P NPQ T+M KIL GP Sbjct: 730 FGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAGGP 773
>ALKJ_PSEOL (Q00593) Alcohol dehydrogenase [acceptor] (EC 1.1.99.-)| Length = 558 Score = 35.4 bits (80), Expect = 0.12 Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 4/135 (2%) Frame = -3 Query: 582 SHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEMERVLNMSVQANVNLIPKHTNTTE 403 S +D+ + GIK IL+ S A ++ E V +V+ + +I E Sbjct: 412 SDHEDIKTMIAGIKIGRAILQAPSMAK------HFKHEVVPGQAVKTDDEIIEDIRRRAE 465 Query: 402 SLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQA 235 TI+H G C +GK VVD ++ G++ +RVVD S N A Sbjct: 466 -----------TIYHPVGTCRMGKDPASVVDPCLKIRGLANIRVVDASIMPHLVAGNTNA 514 Query: 234 TVMMMGRYFGVKILR 190 +M+ I+R Sbjct: 515 PTIMIAENAAEIIMR 529
>CHDH_MOUSE (Q8BJ64) Choline dehydrogenase, mitochondrial precursor (EC| 1.1.99.1) (CHD) (CDH) Length = 596 Score = 35.0 bits (79), Expect = 0.16 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%) Frame = -3 Query: 420 HTNTTESLEQFCKDTVITIWHYHGGCHVGK------VVDQQHRVLGVSGLRVVDGSTFSR 259 H + + ++ F + + +H C +G+ VVD Q +V+GV LRVVD S Sbjct: 493 HVQSDKEIDAFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIGVENLRVVDASIMPS 552 Query: 258 SPGTNPQATVMMM 220 N A +M+ Sbjct: 553 VVSGNLNAPTVMI 565
>ALKJ_PSEPU (Q9WWW2) Alcohol dehydrogenase [acceptor] (EC 1.1.99.-)| Length = 552 Score = 35.0 bits (79), Expect = 0.16 Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 4/136 (2%) Frame = -3 Query: 582 SHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEMERVLNMSVQANVNLIPKHTNTTE 403 S P+D+ + GIK I S A ++ E V +V ++ ++ + E Sbjct: 412 SDPEDIKTMIAGIKIGRAIFDAPSMAK------HFKREIVPGPAVTSDDEIVADIRSRAE 465 Query: 402 SLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQA 235 TI+H G C +GK VVD +V G+ +RVVD S N A Sbjct: 466 -----------TIYHPVGTCRMGKDPASVVDPCLQVRGLRNIRVVDASIMPNLVAGNTNA 514 Query: 234 TVMMMGRYFGVKILRE 187 +M+ I+R+ Sbjct: 515 PTIMIAENAAEIIVRK 530
>ALOX_PICAN (P04841) Alcohol oxidase (EC 1.1.3.13) (AOX) (Methanol oxidase)| (MOX) Length = 664 Score = 34.3 bits (77), Expect = 0.27 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 11/74 (14%) Frame = -3 Query: 405 ESLEQFCKDTVITIWHYHGGCHV-----------GKVVDQQHRVLGVSGLRVVDGSTFSR 259 E++ + K+ T WH G C + G V+D + V GV L+V D S Sbjct: 553 EAIVNYIKEHTETTWHCLGTCSMAPREGSKIAPKGGVLDARLNVYGVQNLKVADLSVCPD 612 Query: 258 SPGTNPQATVMMMG 217 + G N +T + +G Sbjct: 613 NVGCNTYSTALTIG 626
>GOX_ASPNG (P13006) Glucose oxidase precursor (EC 1.1.3.4) (Glucose| oxyhydrase) (GOD) (Beta-D-glucose:oxygen 1-oxido-reductase) Length = 605 Score = 33.9 bits (76), Expect = 0.36 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Frame = -3 Query: 363 WHYHGGC-----HVGKVVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQATVMMMGRYFGVK 199 +H G C +G VVD RV GV GLRV+DGS P T + VM + +K Sbjct: 537 YHGVGTCSMMPKEMGGVVDNAARVYGVQGLRVIDGSI----PPTQMSSHVMTVFYAMALK 592 Query: 198 I 196 I Sbjct: 593 I 593
>AROQ_BARHE (Q6G523) 3-dehydroquinate dehydratase (EC 4.2.1.10)| (3-dehydroquinase) (Type II DHQase) Length = 148 Score = 32.3 bits (72), Expect = 1.0 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 9/95 (9%) Frame = -3 Query: 474 MERVLNMSVQANVNLIPKH------TNTTESLEQFCKDTVITIW---HYHGGCHVGKVVD 322 M ++ + N+N + K T T + +EQFCK+ + H++ + G++V+ Sbjct: 1 MSMIITILNGPNLNFLGKREPEIYGTETLKDIEQFCKECATRLGVRIHFYQSNYEGQLVE 60 Query: 321 QQHRVLGVSGLRVVDGSTFSRSPGTNPQATVMMMG 217 +GVS +++ + +S + A M G Sbjct: 61 WIQEAIGVSAGLIINPAAYSHTSVAILDALKMFTG 95
>GOX_TALFL (Q92452) Glucose oxidase precursor (EC 1.1.3.4) (Glucose| oxyhydrase) (GOD) (Beta-D-glucose:oxygen 1-oxido-reductase) Length = 605 Score = 32.3 bits (72), Expect = 1.0 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Frame = -3 Query: 363 WHYHGGC-----HVGKVVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQATVMMMGRYFGVK 199 WH C +G VVD +V G GLRV+DGS P T + VM + ++G+ Sbjct: 537 WHAVSSCSMMSRELGGVVDATAKVYGTQGLRVIDGSI----PPTQVSSHVMTI--FYGMA 590 Query: 198 I 196 + Sbjct: 591 L 591
>GOX_PENAG (P81156) Glucose oxidase (EC 1.1.3.4) (Glucose oxyhydrase) (GOD)| (Beta-D-glucose:oxygen 1-oxido-reductase) Length = 587 Score = 32.3 bits (72), Expect = 1.0 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Frame = -3 Query: 363 WHYHGGC-----HVGKVVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQATVMMMGRYFGVK 199 WH C +G VVD +V G GLRV+DGS P T + VM + ++G+ Sbjct: 519 WHAVSSCSMMSRELGGVVDATAKVYGTQGLRVIDGSI----PPTQVSSHVMTI--FYGMA 572 Query: 198 I 196 + Sbjct: 573 L 573
>BETA_STAXY (Q9X2M2) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 560 Score = 31.2 bits (69), Expect = 2.3 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 7/71 (9%) Frame = -3 Query: 411 TTESLEQFCKDTVITIWHYHGGCHVGKVVDQQH-------RVLGVSGLRVVDGSTFSRSP 253 T E + ++ K T H C +G D+ +V G+ LRVVD S R+ Sbjct: 455 TDEEIIEWVKRDGETALHPSCSCRMGPASDEMSVVDPETFKVHGMENLRVVDASVMPRTT 514 Query: 252 GTNPQATVMMM 220 N + V+MM Sbjct: 515 NGNIHSPVLMM 525
>BETA_STAS1 (Q4A0Q1) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 560 Score = 31.2 bits (69), Expect = 2.3 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 7/71 (9%) Frame = -3 Query: 411 TTESLEQFCKDTVITIWHYHGGCHVGKVVDQQH-------RVLGVSGLRVVDGSTFSRSP 253 T E + ++ K T H C +G D+ +V G+ LRVVD S R+ Sbjct: 455 TDEEIIEWVKRDGETALHPSCSCRMGPASDEMSVVDPETFKVHGMENLRVVDASVMPRTT 514 Query: 252 GTNPQATVMMM 220 N + V+MM Sbjct: 515 NGNIHSPVLMM 525
>MBI2_YEAST (P03873) Cytochrome b mRNA maturase bI2| Length = 423 Score = 31.2 bits (69), Expect = 2.3 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -3 Query: 465 VLNMSVQANVNLIPKHTNTTESLEQFCKDTVITIWHYHGGCHVGK 331 + NMS + N+ +IPK SL+ + + IW GC +GK Sbjct: 312 IKNMSGKGNIKVIPK------SLDNYLTPLALAIWIMDDGCKLGK 350
>VATB_SULAC (Q4J8L8) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 466 Score = 31.2 bits (69), Expect = 2.3 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 1/100 (1%) Frame = -3 Query: 474 MERVLNMSVQANVNLIPKHTNTTESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGVS 295 M ++N+ ++++I E + + +I + G G VVD Q GV+ Sbjct: 1 MSTLMNIREYNSISMIKGPLMAIEGVTDAAYNELIEVEMPDGSKRRGIVVDSQS---GVA 57 Query: 294 GLRVVDGSTFSRSPGTNP-QATVMMMGRYFGVKILRERLG 178 ++V +G+T G +P Q+ V +GR VKI E LG Sbjct: 58 IVQVFEGTT-----GVSPTQSKVRFLGRGLEVKISEEMLG 92
>BUK_BACCR (Q818T1) Probable butyrate kinase (EC 2.7.2.7) (BK) (Branched-chain| carboxylic acid kinase) Length = 367 Score = 30.8 bits (68), Expect = 3.0 Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Frame = -3 Query: 540 TIEKILKTNSFAHLTPDGAGYEMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTVITIW 361 ++ +IL N + T G VL +++ +V I K+ + E F K+T++ + Sbjct: 2 SVNRILVINPGSTSTKIGVFDNERPVLEETIRHDVEQIGKYKRIIDQYE-FRKETILEVL 60 Query: 360 HYHGGCHVGKVVDQQHRVLGVSG-LRVVDGSTFS 262 H H G ++ K+ + V G G LR ++G T++ Sbjct: 61 HSH-GINISKL----NAVCGRGGLLRPIEGGTYT 89
>CHOD_BREST (P22637) Cholesterol oxidase precursor (EC 1.1.3.6) (CHOD)| Length = 552 Score = 30.8 bits (68), Expect = 3.0 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -3 Query: 363 WHYHGGCHVGKVVDQQHRVLGVSGLRVVDGSTFSRSPGTNPQATV 229 +H GG + K D R+ GL VVDGS + G NP T+ Sbjct: 491 YHPLGGVLLNKATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTI 535
>CLPX_WIGBR (Q8D347) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 415 Score = 29.6 bits (65), Expect = 6.7 Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 5/101 (4%) Frame = -3 Query: 570 DLSRCVYGI---KTIEKILKTNSFAHLTPDGAGYEMERVLNMSVQANVNLIPKHTNTTES 400 D+ + +GI I+KI + + +T D +G +++ L ++ ++ +PK Sbjct: 173 DIKKAQHGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTISAVPKKGGRKHP 232 Query: 399 LEQFCKDTVITIWHYHGGCHVG--KVVDQQHRVLGVSGLRV 283 ++F I GG G K+++Q+ V G V Sbjct: 233 QQEFFHVDTTNILFICGGAFSGLNKIIEQRVLVKNSIGFNV 273
>RPB2_ASHGO (Q753Q4) DNA-directed RNA polymerase II polypeptide 2 (EC 2.7.7.6)| (RNA polymerase II subunit 2) Length = 1222 Score = 29.3 bits (64), Expect = 8.8 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +3 Query: 267 TLSHQQRGALRLQAPGAAGRPPSLHDTHHGSARW*LPCPCKIALG 401 TLSH +R + G +P LH+TH W L CP + G Sbjct: 486 TLSHLRRTNTPIGRDGKLAKPRQLHNTH-----WGLVCPAETPEG 525
>RPB2_CANGA (Q6FLD5) DNA-directed RNA polymerase II polypeptide 2 (EC 2.7.7.6)| (RNA polymerase II subunit 2) Length = 1223 Score = 29.3 bits (64), Expect = 8.8 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +3 Query: 267 TLSHQQRGALRLQAPGAAGRPPSLHDTHHGSARW*LPCPCKIALG 401 TLSH +R + G +P LH+TH W L CP + G Sbjct: 489 TLSHLRRTNTPIGRDGKLAKPRQLHNTH-----WGLVCPAETPEG 528
>MRP14_ARATH (Q9LYS2) Multidrug resistance-associated protein 14 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 14) (ATP-energized glutathione S-conjugate pump 14) Length = 1389 Score = 29.3 bits (64), Expect = 8.8 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = -3 Query: 402 SLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGVSGLRVVDGSTFS 262 +L+ C+ + IW G C + +VV ++ G+ L V DGS +S Sbjct: 1237 NLDPLCQHSDAEIWEVLGKCQLKEVVQEKEN--GLDSLVVEDGSNWS 1281
>RPB2_YEAST (P08518) DNA-directed RNA polymerase II 140 kDa polypeptide (EC| 2.7.7.6) (B150) (RNA polymerase II subunit 2) Length = 1224 Score = 29.3 bits (64), Expect = 8.8 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +3 Query: 267 TLSHQQRGALRLQAPGAAGRPPSLHDTHHGSARW*LPCPCKIALG 401 TLSH +R + G +P LH+TH W L CP + G Sbjct: 491 TLSHLRRTNTPIGRDGKLAKPRQLHNTH-----WGLVCPAETPEG 530 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,868,365 Number of Sequences: 219361 Number of extensions: 2012349 Number of successful extensions: 5162 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 5053 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5154 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
