ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19b16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479496.1| Oryza sativa (japonica cultivar-group), mRNA 454 e-124
2dbj|AK073523.1| Oryza sativa (japonica cultivar-group) cDNA clon... 454 e-124
3dbj|AK058946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 454 e-124
4gb|AY111889.1| Zea mays CL41475_1 mRNA sequence 222 1e-54
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 200 4e-48
6dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic D... 200 4e-48
7dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic D... 200 4e-48
8ref|NM_111561.3| Arabidopsis thaliana ATP binding / acyl-CoA deh... 64 6e-07
9gb|BT002365.1| Arabidopsis thaliana clone U18687 unknown protein... 64 6e-07
10dbj|AK176022.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 64 6e-07
11gb|AY091014.1| Arabidopsis thaliana unknown protein (At3g06800) ... 64 6e-07
12gb|AC023912.5|ATAC023912 Arabidopsis thaliana chromosome III BAC... 52 0.002
13emb|BX842414.1|CNS0A7DI Arabidopsis thaliana Full-length cDNA Co... 52 0.002
14gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 2.4
15emb|CR932964.2| Medicago truncatula chromosome 5 clone mte1-60l1... 42 2.4
16emb|CR931729.2| Medicago truncatula chromosome 5 clone mte1-82a1... 42 2.4
17emb|AL606925.16| Mouse DNA sequence from clone RP23-12J1 on chro... 42 2.4
18gb|BT015285.1| Drosophila melanogaster GH17517 full insert cDNA 40 9.4
19gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 9.4
20emb|CT010454.8| Mouse DNA sequence from clone RP23-348C22 on chr... 40 9.4
21ref|XM_758757.1| Theileria parva strain Muguga chromosome 4 hypo... 40 9.4
22emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 9.4
23emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 40 9.4
24emb|AL022139.1|DMC65F1 Drosophila melanogaster cosmid clone 65F1 40 9.4
25gb|AC105774.8| Drosophila melanogaster X BAC RP98-8O5 (Roswell P... 40 9.4
26gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell ... 40 9.4
27gb|AC092588.2| Homo sapiens BAC clone RP11-44A12 from 2, complet... 40 9.4
28gb|AY171618.2| Pseudomonas fluorescens strain Q8rl-96 putative G... 40 9.4
29dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 40 9.4
30gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 9.4
31gb|AC154613.3| Mus musculus BAC clone RP23-338M12 from chromosom... 40 9.4
32gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 o... 40 9.4 
>ref|XM_479496.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2721

 Score =  454 bits (229), Expect = e-124
 Identities = 384/436 (88%)
 Strand = Plus / Minus

                                                                        
Query: 250  tacagccttgccctttgcagctccagcttcgcgatcgtgccgagatggacttcatcaggg 309
            |||| |||||| ||||||||||||||||| ||||| || || ||||| ||||||||||||
Sbjct: 2568 tacatccttgctctttgcagctccagcttagcgattgtcccaagatgaacttcatcaggg 2509

                                                                        
Query: 310  ccgtcggcgagccgcagtgtcctagcggttgcccatagatgggataggaccgtgtcggat 369
            |||||||||| || |||||||||||| |||||||||||||| ||||| || ||||| |||
Sbjct: 2508 ccgtcggcgatcctcagtgtcctagcagttgcccatagatgtgatagaactgtgtctgat 2449

                                                                        
Query: 370  gagaccccggcagcgccgtggacttgtattgccatgtcaagcactttcagggccatattt 429
            ||||  || ||| | || || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 2448 gagagaccagcaccaccatgaacttgcattgccatgtcaagcactttcagggccatattt 2389

                                                                        
Query: 430  ggagccgccaccttggccattgcgagaatcccgcgggccttcttgttcccatgccggtcg 489
            ||||| ||||||||||||||||| || || || || || |||||||||||||| ||||| 
Sbjct: 2388 ggagctgccaccttggccattgcaaggataccacgagctttcttgttcccatgtcggtca 2329

                                                                        
Query: 490  agctgatcggctgcttcaagcaccagaagcctagtttgctccagttctatccggcatttt 549
            || |||||||||||||||||||||||||| ||||  ||||||||||||| |||||| || 
Sbjct: 2328 agttgatcggctgcttcaagcaccagaagtctagcctgctccagttctacccggcacttc 2269

                                                                        
Query: 550  gccaggtctgactgaaaggaaccatgctgcgcaatcttctttccaaaagcggtcctactt 609
            ||||| ||||    |||||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 2268 gccagatctgctaaaaaggaaccatgttgcgcaatcttttttccaaaagtggtcctactt 2209

                                                                        
Query: 610  aaggccctctcaaccatcatattcatgccacgttcagctgctcctattagtctcatgcaa 669
            ||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 2208 aaggccctctcgaccatcaaattcatgccacgttctgctgcccctattagtctcatgcaa 2149

                            
Query: 670  tgatgcaatcttncag 685
            ||||| |||||| |||
Sbjct: 2148 tgatgtaatcttccag 2133
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>dbj|AK073523.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044B11, full
            insert sequence
          Length = 2721

 Score =  454 bits (229), Expect = e-124
 Identities = 384/436 (88%)
 Strand = Plus / Minus

                                                                        
Query: 250  tacagccttgccctttgcagctccagcttcgcgatcgtgccgagatggacttcatcaggg 309
            |||| |||||| ||||||||||||||||| ||||| || || ||||| ||||||||||||
Sbjct: 2568 tacatccttgctctttgcagctccagcttagcgattgtcccaagatgaacttcatcaggg 2509

                                                                        
Query: 310  ccgtcggcgagccgcagtgtcctagcggttgcccatagatgggataggaccgtgtcggat 369
            |||||||||| || |||||||||||| |||||||||||||| ||||| || ||||| |||
Sbjct: 2508 ccgtcggcgatcctcagtgtcctagcagttgcccatagatgtgatagaactgtgtctgat 2449

                                                                        
Query: 370  gagaccccggcagcgccgtggacttgtattgccatgtcaagcactttcagggccatattt 429
            ||||  || ||| | || || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 2448 gagagaccagcaccaccatgaacttgcattgccatgtcaagcactttcagggccatattt 2389

                                                                        
Query: 430  ggagccgccaccttggccattgcgagaatcccgcgggccttcttgttcccatgccggtcg 489
            ||||| ||||||||||||||||| || || || || || |||||||||||||| ||||| 
Sbjct: 2388 ggagctgccaccttggccattgcaaggataccacgagctttcttgttcccatgtcggtca 2329

                                                                        
Query: 490  agctgatcggctgcttcaagcaccagaagcctagtttgctccagttctatccggcatttt 549
            || |||||||||||||||||||||||||| ||||  ||||||||||||| |||||| || 
Sbjct: 2328 agttgatcggctgcttcaagcaccagaagtctagcctgctccagttctacccggcacttc 2269

                                                                        
Query: 550  gccaggtctgactgaaaggaaccatgctgcgcaatcttctttccaaaagcggtcctactt 609
            ||||| ||||    |||||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 2268 gccagatctgctaaaaaggaaccatgttgcgcaatcttttttccaaaagtggtcctactt 2209

                                                                        
Query: 610  aaggccctctcaaccatcatattcatgccacgttcagctgctcctattagtctcatgcaa 669
            ||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 2208 aaggccctctcgaccatcaaattcatgccacgttctgctgcccctattagtctcatgcaa 2149

                            
Query: 670  tgatgcaatcttncag 685
            ||||| |||||| |||
Sbjct: 2148 tgatgtaatcttccag 2133
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>dbj|AK058946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-H11, full
            insert sequence
          Length = 1373

 Score =  454 bits (229), Expect = e-124
 Identities = 384/436 (88%)
 Strand = Plus / Minus

                                                                        
Query: 250  tacagccttgccctttgcagctccagcttcgcgatcgtgccgagatggacttcatcaggg 309
            |||| |||||| ||||||||||||||||| ||||| || || ||||| ||||||||||||
Sbjct: 1270 tacatccttgctctttgcagctccagcttagcgattgtcccaagatgaacttcatcaggg 1211

                                                                        
Query: 310  ccgtcggcgagccgcagtgtcctagcggttgcccatagatgggataggaccgtgtcggat 369
            |||||||||| || |||||||||||| |||||||||||||| ||||| || ||||| |||
Sbjct: 1210 ccgtcggcgatcctcagtgtcctagcagttgcccatagatgtgatagaactgtgtctgat 1151

                                                                        
Query: 370  gagaccccggcagcgccgtggacttgtattgccatgtcaagcactttcagggccatattt 429
            ||||  || ||| | || || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 1150 gagagaccagcaccaccatgaacttgcattgccatgtcaagcactttcagggccatattt 1091

                                                                        
Query: 430  ggagccgccaccttggccattgcgagaatcccgcgggccttcttgttcccatgccggtcg 489
            ||||| ||||||||||||||||| || || || || || |||||||||||||| ||||| 
Sbjct: 1090 ggagctgccaccttggccattgcaaggataccacgagctttcttgttcccatgtcggtca 1031

                                                                        
Query: 490  agctgatcggctgcttcaagcaccagaagcctagtttgctccagttctatccggcatttt 549
            || |||||||||||||||||||||||||| ||||  ||||||||||||| |||||| || 
Sbjct: 1030 agttgatcggctgcttcaagcaccagaagtctagcctgctccagttctacccggcacttc 971

                                                                        
Query: 550  gccaggtctgactgaaaggaaccatgctgcgcaatcttctttccaaaagcggtcctactt 609
            ||||| ||||    |||||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 970  gccagatctgctaaaaaggaaccatgttgcgcaatcttttttccaaaagtggtcctactt 911

                                                                        
Query: 610  aaggccctctcaaccatcatattcatgccacgttcagctgctcctattagtctcatgcaa 669
            ||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 910  aaggccctctcgaccatcaaattcatgccacgttctgctgcccctattagtctcatgcaa 851

                            
Query: 670  tgatgcaatcttncag 685
            ||||| |||||| |||
Sbjct: 850  tgatgtaatcttccag 835
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>gb|AY111889.1| Zea mays CL41475_1 mRNA sequence
          Length = 556

 Score =  222 bits (112), Expect = 1e-54
 Identities = 310/379 (81%)
 Strand = Plus / Plus

                                                                       
Query: 266 gcagctccagcttcgcgatcgtgccgagatggacttcatcagggccgtcggcgagccgca 325
           |||| |||||||| ||||| || ||||||||||| || || |||||||| || | |||||
Sbjct: 164 gcagttccagcttggcgattgtcccgagatggacctcgtcggggccgtctgcaatccgca 223

                                                                       
Query: 326 gtgtcctagcggttgcccatagatgggataggaccgtgtcggatgagaccccggcagcgc 385
           | | |||||| ||||||||||| || || | ||||| ||| || ||||| || || ||||
Sbjct: 224 ggggcctagccgttgcccataggtgcgacaagaccgggtcagacgagacaccagctgcgc 283

                                                                       
Query: 386 cgtggacttgtattgccatgtcaagcactttcagggccatatttggagccgccaccttgg 445
           |||| ||||| || |||||||||||||| |||||||||||||||||||| || |||||||
Sbjct: 284 cgtgaacttgcatcgccatgtcaagcaccttcagggccatatttggagctgcaaccttgg 343

                                                                       
Query: 446 ccattgcgagaatcccgcgggccttcttgttcccatgccggtcgagctgatcggctgctt 505
           |||| | ||| || || |||||    ||||||||||| || || || |||||||| ||||
Sbjct: 344 ccatcgggaggataccacgggcnnnnttgttcccatgtcgatcaagttgatcggcagctt 403

                                                                       
Query: 506 caagcaccagaagcctagtttgctccagttctatccggcattttgccaggtctgactgaa 565
           |||| || | |||||| |  ||||||||||| ||||| || ||||| || |||||     
Sbjct: 404 caaggactaaaagccttgcctgctccagttcaatccgacactttgcaagatctgatnnnn 463

                                                                       
Query: 566 aggaaccatgctgcgcaatcttctttccaaaagcggtcctacttaaggccctctcaacca 625
            |||||||||||| |||||| ||||||||||||||| |||  |||||| |||||| ||||
Sbjct: 464 nggaaccatgctgtgcaatcctctttccaaaagcgggcctggttaagggcctctctacca 523

                              
Query: 626 tcatattcatgccacgttc 644
           ||| ||||||||| |||||
Sbjct: 524 tcagattcatgccccgttc 542
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  200 bits (101), Expect = 4e-48
 Identities = 170/193 (88%)
 Strand = Plus / Minus

                                                                            
Query: 250      tacagccttgccctttgcagctccagcttcgcgatcgtgccgagatggacttcatcaggg 309
                |||| |||||| ||||||||||||||||| ||||| || || ||||| ||||||||||||
Sbjct: 28505234 tacatccttgctctttgcagctccagcttagcgattgtcccaagatgaacttcatcaggg 28505175

                                                                            
Query: 310      ccgtcggcgagccgcagtgtcctagcggttgcccatagatgggataggaccgtgtcggat 369
                |||||||||| || |||||||||||| |||||||||||||| ||||| || ||||| |||
Sbjct: 28505174 ccgtcggcgatcctcagtgtcctagcagttgcccatagatgtgatagaactgtgtctgat 28505115

                                                                            
Query: 370      gagaccccggcagcgccgtggacttgtattgccatgtcaagcactttcagggccatattt 429
                ||||  || ||| | || || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 28505114 gagagaccagcaccaccatgaacttgcattgccatgtcaagcactttcagggccatattt 28505055

                             
Query: 430      ggagccgccacct 442
                ||||| |||||||
Sbjct: 28505054 ggagctgccacct 28505042



 Score =  172 bits (87), Expect = 1e-39
 Identities = 113/122 (92%)
 Strand = Plus / Minus

                                                                            
Query: 564      aaaggaaccatgctgcgcaatcttctttccaaaagcggtcctacttaaggccctctcaac 623
                |||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| ||
Sbjct: 28504693 aaaggaaccatgttgcgcaatcttttttccaaaagtggtcctacttaaggccctctcgac 28504634

                                                                            
Query: 624      catcatattcatgccacgttcagctgctcctattagtctcatgcaatgatgcaatcttnc 683
                ||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |
Sbjct: 28504633 catcaaattcatgccacgttctgctgcccctattagtctcatgcaatgatgtaatcttcc 28504574

                  
Query: 684      ag 685
                ||
Sbjct: 28504573 ag 28504572



 Score =  111 bits (56), Expect = 3e-21
 Identities = 95/108 (87%)
 Strand = Plus / Minus

                                                                            
Query: 438      caccttggccattgcgagaatcccgcgggccttcttgttcccatgccggtcgagctgatc 497
                ||||||||||||||| || || || || || |||||||||||||| ||||| || |||||
Sbjct: 28504969 caccttggccattgcaaggataccacgagctttcttgttcccatgtcggtcaagttgatc 28504910

                                                                
Query: 498      ggctgcttcaagcaccagaagcctagtttgctccagttctatccggca 545
                ||||||||||||||||||||| ||||  ||||||||||||| ||||||
Sbjct: 28504909 ggctgcttcaagcaccagaagtctagcctgctccagttctacccggca 28504862
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>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0037D09
          Length = 140470

 Score =  200 bits (101), Expect = 4e-48
 Identities = 170/193 (88%)
 Strand = Plus / Minus

                                                                         
Query: 250   tacagccttgccctttgcagctccagcttcgcgatcgtgccgagatggacttcatcaggg 309
             |||| |||||| ||||||||||||||||| ||||| || || ||||| ||||||||||||
Sbjct: 70986 tacatccttgctctttgcagctccagcttagcgattgtcccaagatgaacttcatcaggg 70927

                                                                         
Query: 310   ccgtcggcgagccgcagtgtcctagcggttgcccatagatgggataggaccgtgtcggat 369
             |||||||||| || |||||||||||| |||||||||||||| ||||| || ||||| |||
Sbjct: 70926 ccgtcggcgatcctcagtgtcctagcagttgcccatagatgtgatagaactgtgtctgat 70867

                                                                         
Query: 370   gagaccccggcagcgccgtggacttgtattgccatgtcaagcactttcagggccatattt 429
             ||||  || ||| | || || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 70866 gagagaccagcaccaccatgaacttgcattgccatgtcaagcactttcagggccatattt 70807

                          
Query: 430   ggagccgccacct 442
             ||||| |||||||
Sbjct: 70806 ggagctgccacct 70794



 Score =  172 bits (87), Expect = 1e-39
 Identities = 113/122 (92%)
 Strand = Plus / Minus

                                                                         
Query: 564   aaaggaaccatgctgcgcaatcttctttccaaaagcggtcctacttaaggccctctcaac 623
             |||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| ||
Sbjct: 70445 aaaggaaccatgttgcgcaatcttttttccaaaagtggtcctacttaaggccctctcgac 70386

                                                                         
Query: 624   catcatattcatgccacgttcagctgctcctattagtctcatgcaatgatgcaatcttnc 683
             ||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |
Sbjct: 70385 catcaaattcatgccacgttctgctgcccctattagtctcatgcaatgatgtaatcttcc 70326

               
Query: 684   ag 685
             ||
Sbjct: 70325 ag 70324



 Score =  111 bits (56), Expect = 3e-21
 Identities = 95/108 (87%)
 Strand = Plus / Minus

                                                                         
Query: 438   caccttggccattgcgagaatcccgcgggccttcttgttcccatgccggtcgagctgatc 497
             ||||||||||||||| || || || || || |||||||||||||| ||||| || |||||
Sbjct: 70721 caccttggccattgcaaggataccacgagctttcttgttcccatgtcggtcaagttgatc 70662

                                                             
Query: 498   ggctgcttcaagcaccagaagcctagtttgctccagttctatccggca 545
             ||||||||||||||||||||| ||||  ||||||||||||| ||||||
Sbjct: 70661 ggctgcttcaagcaccagaagtctagcctgctccagttctacccggca 70614
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>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0618H09
          Length = 142306

 Score =  200 bits (101), Expect = 4e-48
 Identities = 170/193 (88%)
 Strand = Plus / Minus

                                                                         
Query: 250   tacagccttgccctttgcagctccagcttcgcgatcgtgccgagatggacttcatcaggg 309
             |||| |||||| ||||||||||||||||| ||||| || || ||||| ||||||||||||
Sbjct: 62775 tacatccttgctctttgcagctccagcttagcgattgtcccaagatgaacttcatcaggg 62716

                                                                         
Query: 310   ccgtcggcgagccgcagtgtcctagcggttgcccatagatgggataggaccgtgtcggat 369
             |||||||||| || |||||||||||| |||||||||||||| ||||| || ||||| |||
Sbjct: 62715 ccgtcggcgatcctcagtgtcctagcagttgcccatagatgtgatagaactgtgtctgat 62656

                                                                         
Query: 370   gagaccccggcagcgccgtggacttgtattgccatgtcaagcactttcagggccatattt 429
             ||||  || ||| | || || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 62655 gagagaccagcaccaccatgaacttgcattgccatgtcaagcactttcagggccatattt 62596

                          
Query: 430   ggagccgccacct 442
             ||||| |||||||
Sbjct: 62595 ggagctgccacct 62583



 Score =  172 bits (87), Expect = 1e-39
 Identities = 113/122 (92%)
 Strand = Plus / Minus

                                                                         
Query: 564   aaaggaaccatgctgcgcaatcttctttccaaaagcggtcctacttaaggccctctcaac 623
             |||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| ||
Sbjct: 62234 aaaggaaccatgttgcgcaatcttttttccaaaagtggtcctacttaaggccctctcgac 62175

                                                                         
Query: 624   catcatattcatgccacgttcagctgctcctattagtctcatgcaatgatgcaatcttnc 683
             ||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |
Sbjct: 62174 catcaaattcatgccacgttctgctgcccctattagtctcatgcaatgatgtaatcttcc 62115

               
Query: 684   ag 685
             ||
Sbjct: 62114 ag 62113



 Score =  111 bits (56), Expect = 3e-21
 Identities = 95/108 (87%)
 Strand = Plus / Minus

                                                                         
Query: 438   caccttggccattgcgagaatcccgcgggccttcttgttcccatgccggtcgagctgatc 497
             ||||||||||||||| || || || || || |||||||||||||| ||||| || |||||
Sbjct: 62510 caccttggccattgcaaggataccacgagctttcttgttcccatgtcggtcaagttgatc 62451

                                                             
Query: 498   ggctgcttcaagcaccagaagcctagtttgctccagttctatccggca 545
             ||||||||||||||||||||| ||||  ||||||||||||| ||||||
Sbjct: 62450 ggctgcttcaagcaccagaagtctagcctgctccagttctacccggca 62403
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>ref|NM_111561.3| Arabidopsis thaliana ATP binding / acyl-CoA dehydrogenase/
            oxidoreductase/ protein kinase AT3G06810 mRNA, complete
            cds
          Length = 2794

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                        
Query: 391  acttgtattgccatgtcaagcactttcagggccatatttggagccgccaccttggccatt 450
            |||||||||||| |||| || || ||||  ||||| |||||||| || ||||||||||||
Sbjct: 2472 acttgtattgccgtgtctagtaccttcaatgccatgtttggagctgcaaccttggccatt 2413

                    
Query: 451  gcgagaat 458
            ||||||||
Sbjct: 2412 gcgagaat 2405



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 637  ccacgttcagctgctcctattagtctcatgcaatgatgcaatcttncag 685
            ||||| || ||||| |||||||||||||||||||| |||| |||| |||
Sbjct: 2226 ccacgctctgctgcacctattagtctcatgcaatggtgcagtcttccag 2178
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>gb|BT002365.1| Arabidopsis thaliana clone U18687 unknown protein (At3g06800) mRNA,
            complete cds
          Length = 2506

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                        
Query: 391  acttgtattgccatgtcaagcactttcagggccatatttggagccgccaccttggccatt 450
            |||||||||||| |||| || || ||||  ||||| |||||||| || ||||||||||||
Sbjct: 2330 acttgtattgccgtgtctagtaccttcaatgccatgtttggagctgcaaccttggccatt 2271

                    
Query: 451  gcgagaat 458
            ||||||||
Sbjct: 2270 gcgagaat 2263



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 637  ccacgttcagctgctcctattagtctcatgcaatgatgcaatcttncag 685
            ||||| || ||||| |||||||||||||||||||| |||| |||| |||
Sbjct: 2084 ccacgctctgctgcacctattagtctcatgcaatggtgcagtcttccag 2036
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>dbj|AK176022.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-73-C24
          Length = 2823

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                        
Query: 391  acttgtattgccatgtcaagcactttcagggccatatttggagccgccaccttggccatt 450
            |||||||||||| |||| || || ||||  ||||| |||||||| || ||||||||||||
Sbjct: 2529 acttgtattgccgtgtctagtaccttcaatgccatgtttggagctgcaaccttggccatt 2470

                    
Query: 451  gcgagaat 458
            ||||||||
Sbjct: 2469 gcgagaat 2462



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 637  ccacgttcagctgctcctattagtctcatgcaatgatgcaatcttncag 685
            ||||| || ||||| |||||||||||||||||||| |||| |||| |||
Sbjct: 2283 ccacgctctgctgcacctattagtctcatgcaatggtgcagtcttccag 2235
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>gb|AY091014.1| Arabidopsis thaliana unknown protein (At3g06800) mRNA, complete cds
          Length = 2722

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                        
Query: 391  acttgtattgccatgtcaagcactttcagggccatatttggagccgccaccttggccatt 450
            |||||||||||| |||| || || ||||  ||||| |||||||| || ||||||||||||
Sbjct: 2384 acttgtattgccgtgtctagtaccttcaatgccatgtttggagctgcaaccttggccatt 2325

                    
Query: 451  gcgagaat 458
            ||||||||
Sbjct: 2324 gcgagaat 2317



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 637  ccacgttcagctgctcctattagtctcatgcaatgatgcaatcttncag 685
            ||||| || ||||| |||||||||||||||||||| |||| |||| |||
Sbjct: 2138 ccacgctctgctgcacctattagtctcatgcaatggtgcagtcttccag 2090
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>gb|AC023912.5|ATAC023912 Arabidopsis thaliana chromosome III BAC F3E22 genomic sequence,
             complete sequence
          Length = 63767

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 637   ccacgttcagctgctcctattagtctcatgcaatgatgcaatcttncag 685
             ||||| || ||||| |||||||||||||||||||| |||| |||| |||
Sbjct: 16335 ccacgctctgctgcacctattagtctcatgcaatggtgcagtcttccag 16383



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   accttggccattgcgagaat 458
             ||||||||||||||||||||
Sbjct: 16067 accttggccattgcgagaat 16086
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>emb|BX842414.1|CNS0A7DI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH53ZE04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2760

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 391  acttgtattgccatgtcaagcactttcagggccatatttggagccgccaccttggccatt 450
            |||||||||||| |||| || || ||||  ||||| ||||| || || ||||||||||||
Sbjct: 2472 acttgtattgccgtgtctagtaccttcaatgccatgtttggggctgcaaccttggccatt 2413

                  
Query: 451  gcgaga 456
            ||||||
Sbjct: 2412 gcgaga 2407



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 652  cctattagtctcatgcaatgatgcaatcttncag 685
            |||||||||||||||||||| |||| |||| |||
Sbjct: 2211 cctattagtctcatgcaatggtgcagtcttccag 2178
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 481     tgccggtcgagctgatcggct 501
               |||||||||||||||||||||
Sbjct: 2118833 tgccggtcgagctgatcggct 2118813
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>emb|CR932964.2| Medicago truncatula chromosome 5 clone mte1-60l18, COMPLETE SEQUENCE
          Length = 93777

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 84   tggacaaatgacaatggaatc 104
            |||||||||||||||||||||
Sbjct: 2647 tggacaaatgacaatggaatc 2627
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>emb|CR931729.2| Medicago truncatula chromosome 5 clone mte1-82a1, COMPLETE SEQUENCE
          Length = 94751

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tggacaaatgacaatggaatc 104
           |||||||||||||||||||||
Sbjct: 856 tggacaaatgacaatggaatc 876
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>emb|AL606925.16| Mouse DNA sequence from clone RP23-12J1 on chromosome 4, complete
              sequence
          Length = 239244

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 498    ggctgcttcaagcaccagaag 518
              |||||||||||||||||||||
Sbjct: 134230 ggctgcttcaagcaccagaag 134250
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>gb|BT015285.1| Drosophila melanogaster GH17517 full insert cDNA
          Length = 8498

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  gacaaatgacaatggaatcg 105
           ||||||||||||||||||||
Sbjct: 605 gacaaatgacaatggaatcg 586
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 276     cttcgcgatcgtgccgagat 295
               ||||||||||||||||||||
Sbjct: 1081222 cttcgcgatcgtgccgagat 1081241
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>emb|CT010454.8| Mouse DNA sequence from clone RP23-348C22 on chromosome 13, complete
              sequence
          Length = 221281

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    ggagtgtacatggaggaatc 138
              ||||||||||||||||||||
Sbjct: 205205 ggagtgtacatggaggaatc 205186
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>ref|XM_758757.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
           (TP04_0215) partial mRNA
          Length = 846

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 tattcaccattctatctacc 168
           ||||||||||||||||||||
Sbjct: 658 tattcaccattctatctacc 677
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 276     cttcgcgatcgtgccgagat 295
               ||||||||||||||||||||
Sbjct: 2398736 cttcgcgatcgtgccgagat 2398755
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    ggccgtcggcgagccgcagt 327
              ||||||||||||||||||||
Sbjct: 255803 ggccgtcggcgagccgcagt 255822
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>emb|AL022139.1|DMC65F1 Drosophila melanogaster cosmid clone 65F1
          Length = 33000

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    gacaaatgacaatggaatcg 105
             ||||||||||||||||||||
Sbjct: 23236 gacaaatgacaatggaatcg 23217
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>gb|AC105774.8| Drosophila melanogaster X BAC RP98-8O5 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170186

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     gacaaatgacaatggaatcg 105
              ||||||||||||||||||||
Sbjct: 134346 gacaaatgacaatggaatcg 134327
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>gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 161668

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    gacaaatgacaatggaatcg 105
             ||||||||||||||||||||
Sbjct: 20781 gacaaatgacaatggaatcg 20762
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>gb|AC092588.2| Homo sapiens BAC clone RP11-44A12 from 2, complete sequence
          Length = 140401

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    acaagaggacgaacattaaa 65
             ||||||||||||||||||||
Sbjct: 20416 acaagaggacgaacattaaa 20435
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>gb|AY171618.2| Pseudomonas fluorescens strain Q8rl-96 putative GTP-binding protein
            (engB) gene, partial cds; probable cytochrome C, probable
            cytochrome C4 precursor (CC4), and probable
            thiol:disulfide interchange protein DsbA precursor (dsbA)
            genes, complete cds; and conserved hypothetical protein
            gene, partial cds
          Length = 2962

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 488  cgagctgatcggctgcttcaagcaccag 515
            ||||||||||||| ||| ||||||||||
Sbjct: 2801 cgagctgatcggcggctacaagcaccag 2828
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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA,
              complete genome
          Length = 2516575

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     ttggactctttacaacaaga 51
              ||||||||||||||||||||
Sbjct: 679102 ttggactctttacaacaaga 679121
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    cttcgcgatcgtgccgagat 295
              ||||||||||||||||||||
Sbjct: 416583 cttcgcgatcgtgccgagat 416564
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>gb|AC154613.3| Mus musculus BAC clone RP23-338M12 from chromosome 13, complete sequence
          Length = 200093

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    ggagtgtacatggaggaatc 138
              ||||||||||||||||||||
Sbjct: 169455 ggagtgtacatggaggaatc 169474
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>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete
            sequence
          Length = 315092

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   gacaaatgacaatggaatcg 105
            ||||||||||||||||||||
Sbjct: 4149 gacaaatgacaatggaatcg 4130


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,696,481
Number of Sequences: 3902068
Number of extensions: 4696481
Number of successful extensions: 79200
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78855
Number of HSP's gapped (non-prelim): 342
length of query: 685
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 662
effective length of database: 17,143,297,704
effective search space: 11348863080048
effective search space used: 11348863080048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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