Clone Name | rbasd18m08 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK101597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051G22, full insert sequence Length = 1488 Score = 575 bits (290), Expect = e-161 Identities = 440/490 (89%) Strand = Plus / Minus Query: 254 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 313 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 1237 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 1178 Query: 314 taacctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtca 373 ||||||||||||| || ||||||||||| |||||||| |||||||||| |||||| ||| Sbjct: 1177 taacctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttca 1118 Query: 374 cagtagtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgt 433 | ||| |||||||||||||||| || ||||||||| | ||||| |||||||||||||||| Sbjct: 1117 cggtactctcccattgcacaggggaagttacctgtcgcgccaaaatcttcttgattgtgt 1058 Query: 434 caggatctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaa 493 |||||||||||||||| |||||| ||||||||||| ||||||||||| |||| | | | Sbjct: 1057 caggatctgagtggggtgatgcatccacattggagataactgggattcttggtgttttta 998 Query: 494 tctcggtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgt 553 |||| || |||| || ||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 997 tctctgtctcagctaatgcagattccaatcttgaaacagcaggttgcatgaagcttgtat 938 Query: 554 ggaaagcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttgg 613 ||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 937 ggaaagcaccagcaacagctaggcgcaccgtcattctggccttaaaggactttgctttgg 878 Query: 614 cttcaactgcttcaatacccttcacaccaccagaaactgcatagttaccaggacagagaa 673 |||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 877 cttcgactgcttcaatccccttcacaccaccagaaactgcatagttcccaggacacagaa 818 Query: 674 agtttgctatttgaactctttccttttcatccacgtcctcatttgcagcatcgcataatt 733 ||||||||||||||||||||||||||||||| || ||||| || |||||||||||||||| Sbjct: 817 agtttgctatttgaactctttccttttcatctacttcctcgttagcagcatcgcataatt 758 Query: 734 gttgcacctt 743 | |||||||| Sbjct: 757 gctgcacctt 748
>dbj|AK061403.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H10, full insert sequence Length = 1430 Score = 575 bits (290), Expect = e-161 Identities = 440/490 (89%) Strand = Plus / Minus Query: 254 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 313 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 1217 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 1158 Query: 314 taacctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtca 373 ||||||||||||| || ||||||||||| |||||||| |||||||||| |||||| ||| Sbjct: 1157 taacctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttca 1098 Query: 374 cagtagtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgt 433 | ||| |||||||||||||||| || ||||||||| | ||||| |||||||||||||||| Sbjct: 1097 cggtactctcccattgcacaggggaagttacctgtcgcgccaaaatcttcttgattgtgt 1038 Query: 434 caggatctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaa 493 |||||||||||||||| |||||| ||||||||||| ||||||||||| |||| | | | Sbjct: 1037 caggatctgagtggggtgatgcatccacattggagataactgggattcttggtgttttta 978 Query: 494 tctcggtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgt 553 |||| || |||| || ||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 977 tctctgtctcagctaatgcagattccaatcttgaaacagcaggttgcatgaagcttgtat 918 Query: 554 ggaaagcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttgg 613 ||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 917 ggaaagcaccagcaacagctaggcgcaccgtcattctggccttaaaggactttgctttgg 858 Query: 614 cttcaactgcttcaatacccttcacaccaccagaaactgcatagttaccaggacagagaa 673 |||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 857 cttcgactgcttcaatccccttcacaccaccagaaactgcatagttcccaggacacagaa 798 Query: 674 agtttgctatttgaactctttccttttcatccacgtcctcatttgcagcatcgcataatt 733 ||||||||||||||||||||||||||||||| || ||||| || |||||||||||||||| Sbjct: 797 agtttgctatttgaactctttccttttcatctacttcctcgttagcagcatcgcataatt 738 Query: 734 gttgcacctt 743 | |||||||| Sbjct: 737 gctgcacctt 728
>dbj|AK060653.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H08, full insert sequence Length = 1369 Score = 575 bits (290), Expect = e-161 Identities = 440/490 (89%) Strand = Plus / Minus Query: 254 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 313 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 1222 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 1163 Query: 314 taacctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtca 373 ||||||||||||| || ||||||||||| |||||||| |||||||||| |||||| ||| Sbjct: 1162 taacctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttca 1103 Query: 374 cagtagtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgt 433 | ||| |||||||||||||||| || ||||||||| | ||||| |||||||||||||||| Sbjct: 1102 cggtactctcccattgcacaggggaagttacctgtcgcgccaaaatcttcttgattgtgt 1043 Query: 434 caggatctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaa 493 |||||||||||||||| |||||| ||||||||||| ||||||||||| |||| | | | Sbjct: 1042 caggatctgagtggggtgatgcatccacattggagataactgggattcttggtgttttta 983 Query: 494 tctcggtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgt 553 |||| || |||| || ||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 982 tctctgtctcagctaatgcagattccaatcttgaaacagcaggttgcatgaagcttgtat 923 Query: 554 ggaaagcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttgg 613 ||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 922 ggaaagcaccagcaacagctaggcgcaccgtcattctggccttaaaggactttgctttgg 863 Query: 614 cttcaactgcttcaatacccttcacaccaccagaaactgcatagttaccaggacagagaa 673 |||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 862 cttcgactgcttcaatccccttcacaccaccagaaactgcatagttcccaggacacagaa 803 Query: 674 agtttgctatttgaactctttccttttcatccacgtcctcatttgcagcatcgcataatt 733 ||||||||||||||||||||||||||||||| || ||||| || |||||||||||||||| Sbjct: 802 agtttgctatttgaactctttccttttcatctacttcctcgttagcagcatcgcataatt 743 Query: 734 gttgcacctt 743 | |||||||| Sbjct: 742 gctgcacctt 733
>gb|AY107543.1| Zea mays PCO095765 mRNA sequence Length = 759 Score = 456 bits (230), Expect = e-125 Identities = 401/458 (87%) Strand = Plus / Minus Query: 265 atgttctcgatgctggcacctttgttgatccgtttaatgattcctgctataacctttcca 324 |||||||| ||||| | ||||||||||||| || | || |||||||||||||||||| Sbjct: 496 atgttctcaatgctagtgcctttgttgatcctcttgagaatacctgctataacctttcca 437 Query: 325 ggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtcacagtagtctcc 384 |||||||||||||| || |||||||| || || |||| |||| || | ||||| || ||| Sbjct: 436 ggtccgagttcataacttttctcaagccccttgcccataagattcttaacagtggtttcc 377 Query: 385 cattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcaggatctgag 444 |||||||| |||||||||||||| || || || |||| |||||| |||| |||||||||| Sbjct: 376 cattgcaccggagaggttacctgctgagctaaaatctgcttgatggtgttaggatctgag 317 Query: 445 tggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcggtagca 504 |||||||| ||||||||||||||||| || || ||||| |||| ||||||||| || ||| Sbjct: 316 tggggctgcgcatcaacattggagatgaccggaattctaggtgttctaatctcagtggca 257 Query: 505 gccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaagcacca 564 ||||||||||||||||||||||| ||||| |||||||||||||| || |||||||| ||| Sbjct: 256 gccaacgcagattccaatcttgaaacagctggttgcatgaagctagtatggaaagcgcca 197 Query: 565 gcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttcaactgct 624 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || Sbjct: 196 gcaacagctaggcgaaccgtcattctggccttgaaggactttgctttggcttcgactact 137 Query: 625 tcaatacccttcacaccaccagaaactgcatagttaccaggacagagaaagtttgctatt 684 |||||||| || |||||||||||||||||||| || ||||| || ||||||||||||||| Sbjct: 136 tcaataccttttacaccaccagaaactgcataattcccagggcacagaaagtttgctatt 77 Query: 685 tgaactctttccttttcatccacgtcctcatttgcagc 722 |||||||| || |||||||| || || ||||| ||||| Sbjct: 76 tgaactctatcgttttcatctacttcgtcattagcagc 39
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 200 bits (101), Expect = 5e-48 Identities = 158/177 (89%) Strand = Plus / Plus Query: 402 tacctgttgtgccaagatcttcttgattgtgtcaggatctgagtggggctgtgcatcaac 461 ||||||| | ||||| |||||||||||||||||||||||||||||||| |||||| || Sbjct: 10373404 tacctgtcgcgccaaaatcttcttgattgtgtcaggatctgagtggggtgatgcatccac 10373463 Query: 462 attggagattactgggattctcggtgatctaatctcggtagcagccaacgcagattccaa 521 ||||||||| ||||||||||| |||| | | ||||| || |||| || ||||||||||| Sbjct: 10373464 attggagataactgggattcttggtgtttttatctctgtctcagctaatgcagattccaa 10373523 Query: 522 tcttgagacagcaggttgcatgaagcttgtgtggaaagcaccagcaacagctaggcg 578 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10373524 tcttgaaacagcaggttgcatgaagcttgtatggaaagcaccagcaacagctaggcg 10373580 Score = 129 bits (65), Expect = 1e-26 Identities = 77/81 (95%) Strand = Plus / Plus Query: 579 aaccgtcattctggccttgaaagactttgctttggcttcaactgcttcaatacccttcac 638 |||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 10373937 aaccgtcattctggccttaaaggactttgctttggcttcgactgcttcaatccccttcac 10373996 Query: 639 accaccagaaactgcatagtt 659 ||||||||||||||||||||| Sbjct: 10373997 accaccagaaactgcatagtt 10374017 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 662 caggacagagaaagtttgctatttgaactctttccttttcatccacgtcctcatttgcag 721 ||||||| ||||||||||||||||||||||||||||||||||| || ||||| || |||| Sbjct: 10374103 caggacacagaaagtttgctatttgaactctttccttttcatctacttcctcgttagcag 10374162 Query: 722 catcgcataattgttgcacctt 743 ||||||||||||| |||||||| Sbjct: 10374163 catcgcataattgctgcacctt 10374184 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 316 acctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtcaca 375 ||||||||||| || ||||||||||| |||||||| |||||||||| |||||| |||| Sbjct: 10373214 acctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttcacg 10373273 Query: 376 gtagtctcccattgcacaggagaggttacctgt 408 ||| |||||||||||||||| || ||||||||| Sbjct: 10373274 gtactctcccattgcacaggggaagttacctgt 10373306 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 254 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 313 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 10373030 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 10373089 Query: 314 taacct 319 |||||| Sbjct: 10373090 taacct 10373095
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 200 bits (101), Expect = 5e-48 Identities = 158/177 (89%) Strand = Plus / Plus Query: 402 tacctgttgtgccaagatcttcttgattgtgtcaggatctgagtggggctgtgcatcaac 461 ||||||| | ||||| |||||||||||||||||||||||||||||||| |||||| || Sbjct: 29957 tacctgtcgcgccaaaatcttcttgattgtgtcaggatctgagtggggtgatgcatccac 30016 Query: 462 attggagattactgggattctcggtgatctaatctcggtagcagccaacgcagattccaa 521 ||||||||| ||||||||||| |||| | | ||||| || |||| || ||||||||||| Sbjct: 30017 attggagataactgggattcttggtgtttttatctctgtctcagctaatgcagattccaa 30076 Query: 522 tcttgagacagcaggttgcatgaagcttgtgtggaaagcaccagcaacagctaggcg 578 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 30077 tcttgaaacagcaggttgcatgaagcttgtatggaaagcaccagcaacagctaggcg 30133 Score = 129 bits (65), Expect = 1e-26 Identities = 77/81 (95%) Strand = Plus / Plus Query: 579 aaccgtcattctggccttgaaagactttgctttggcttcaactgcttcaatacccttcac 638 |||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 30490 aaccgtcattctggccttaaaggactttgctttggcttcgactgcttcaatccccttcac 30549 Query: 639 accaccagaaactgcatagtt 659 ||||||||||||||||||||| Sbjct: 30550 accaccagaaactgcatagtt 30570 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 662 caggacagagaaagtttgctatttgaactctttccttttcatccacgtcctcatttgcag 721 ||||||| ||||||||||||||||||||||||||||||||||| || ||||| || |||| Sbjct: 30656 caggacacagaaagtttgctatttgaactctttccttttcatctacttcctcgttagcag 30715 Query: 722 catcgcataattgttgcacctt 743 ||||||||||||| |||||||| Sbjct: 30716 catcgcataattgctgcacctt 30737 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 316 acctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtcaca 375 ||||||||||| || ||||||||||| |||||||| |||||||||| |||||| |||| Sbjct: 29767 acctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttcacg 29826 Query: 376 gtagtctcccattgcacaggagaggttacctgt 408 ||| |||||||||||||||| || ||||||||| Sbjct: 29827 gtactctcccattgcacaggggaagttacctgt 29859 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 254 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 313 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 29583 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 29642 Query: 314 taacct 319 |||||| Sbjct: 29643 taacct 29648
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 200 bits (101), Expect = 5e-48 Identities = 158/177 (89%) Strand = Plus / Plus Query: 402 tacctgttgtgccaagatcttcttgattgtgtcaggatctgagtggggctgtgcatcaac 461 ||||||| | ||||| |||||||||||||||||||||||||||||||| |||||| || Sbjct: 86870 tacctgtcgcgccaaaatcttcttgattgtgtcaggatctgagtggggtgatgcatccac 86929 Query: 462 attggagattactgggattctcggtgatctaatctcggtagcagccaacgcagattccaa 521 ||||||||| ||||||||||| |||| | | ||||| || |||| || ||||||||||| Sbjct: 86930 attggagataactgggattcttggtgtttttatctctgtctcagctaatgcagattccaa 86989 Query: 522 tcttgagacagcaggttgcatgaagcttgtgtggaaagcaccagcaacagctaggcg 578 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 86990 tcttgaaacagcaggttgcatgaagcttgtatggaaagcaccagcaacagctaggcg 87046 Score = 129 bits (65), Expect = 1e-26 Identities = 77/81 (95%) Strand = Plus / Plus Query: 579 aaccgtcattctggccttgaaagactttgctttggcttcaactgcttcaatacccttcac 638 |||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 87403 aaccgtcattctggccttaaaggactttgctttggcttcgactgcttcaatccccttcac 87462 Query: 639 accaccagaaactgcatagtt 659 ||||||||||||||||||||| Sbjct: 87463 accaccagaaactgcatagtt 87483 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 662 caggacagagaaagtttgctatttgaactctttccttttcatccacgtcctcatttgcag 721 ||||||| ||||||||||||||||||||||||||||||||||| || ||||| || |||| Sbjct: 87569 caggacacagaaagtttgctatttgaactctttccttttcatctacttcctcgttagcag 87628 Query: 722 catcgcataattgttgcacctt 743 ||||||||||||| |||||||| Sbjct: 87629 catcgcataattgctgcacctt 87650 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 316 acctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtcaca 375 ||||||||||| || ||||||||||| |||||||| |||||||||| |||||| |||| Sbjct: 86680 acctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttcacg 86739 Query: 376 gtagtctcccattgcacaggagaggttacctgt 408 ||| |||||||||||||||| || ||||||||| Sbjct: 86740 gtactctcccattgcacaggggaagttacctgt 86772 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 254 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 313 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 86496 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 86555 Query: 314 taacct 319 |||||| Sbjct: 86556 taacct 86561
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 200 bits (101), Expect = 5e-48 Identities = 158/177 (89%) Strand = Plus / Plus Query: 402 tacctgttgtgccaagatcttcttgattgtgtcaggatctgagtggggctgtgcatcaac 461 ||||||| | ||||| |||||||||||||||||||||||||||||||| |||||| || Sbjct: 10371505 tacctgtcgcgccaaaatcttcttgattgtgtcaggatctgagtggggtgatgcatccac 10371564 Query: 462 attggagattactgggattctcggtgatctaatctcggtagcagccaacgcagattccaa 521 ||||||||| ||||||||||| |||| | | ||||| || |||| || ||||||||||| Sbjct: 10371565 attggagataactgggattcttggtgtttttatctctgtctcagctaatgcagattccaa 10371624 Query: 522 tcttgagacagcaggttgcatgaagcttgtgtggaaagcaccagcaacagctaggcg 578 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10371625 tcttgaaacagcaggttgcatgaagcttgtatggaaagcaccagcaacagctaggcg 10371681 Score = 129 bits (65), Expect = 1e-26 Identities = 77/81 (95%) Strand = Plus / Plus Query: 579 aaccgtcattctggccttgaaagactttgctttggcttcaactgcttcaatacccttcac 638 |||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 10372038 aaccgtcattctggccttaaaggactttgctttggcttcgactgcttcaatccccttcac 10372097 Query: 639 accaccagaaactgcatagtt 659 ||||||||||||||||||||| Sbjct: 10372098 accaccagaaactgcatagtt 10372118 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 662 caggacagagaaagtttgctatttgaactctttccttttcatccacgtcctcatttgcag 721 ||||||| ||||||||||||||||||||||||||||||||||| || ||||| || |||| Sbjct: 10372204 caggacacagaaagtttgctatttgaactctttccttttcatctacttcctcgttagcag 10372263 Query: 722 catcgcataattgttgcacctt 743 ||||||||||||| |||||||| Sbjct: 10372264 catcgcataattgctgcacctt 10372285 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 316 acctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtcaca 375 ||||||||||| || ||||||||||| |||||||| |||||||||| |||||| |||| Sbjct: 10371315 acctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttcacg 10371374 Query: 376 gtagtctcccattgcacaggagaggttacctgt 408 ||| |||||||||||||||| || ||||||||| Sbjct: 10371375 gtactctcccattgcacaggggaagttacctgt 10371407 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 254 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 313 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 10371131 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 10371190 Query: 314 taacct 319 |||||| Sbjct: 10371191 taacct 10371196
>emb|AJ007046.1|BNA7046 Brassica napus mRNA for acyl-carrier protein] S-malonyltransferase, partial Length = 1049 Score = 178 bits (90), Expect = 2e-41 Identities = 240/290 (82%) Strand = Plus / Minus Query: 379 gtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcagga 438 ||||||||||| || ||||| || ||||| |||| | ||||||||||||||||| ||| Sbjct: 934 gtctcccattggactggagatgtcacctggcgtgcaagtatcttcttgattgtgtctgga 875 Query: 439 tctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcg 498 |||| || ||||||||||| ||||||||||| |||||||| || || ||| ||||| Sbjct: 874 tctgcatgaggctgtgcatccacattggagatcactgggatccttggacttctgatctcc 815 Query: 499 gtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaa 558 || | ||||| |||| ||| ||||| || || || |||| |||||| |||||||||||| Sbjct: 814 gtttccgccaatgcagcttctaatctagacactgctggttccatgaaacttgtgtggaaa 755 Query: 559 gcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttca 618 ||||| ||||||||||| ||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 754 gcacccgcaacagctagccgaaccgtcattcgagccttgaatgacttagctttggcttca 695 Query: 619 actgcttcaatacccttcacaccaccagaaactgcatagttaccaggaca 668 || |||| || ||||| | ||| ||||| ||||| |||||||| ||||| Sbjct: 694 acaacttcgattcccttaagacctccagatactgcgtagttacccggaca 645
>gb|DQ278438.1| Glycine max malonyltransferase (MT2) mRNA, complete cds Length = 1387 Score = 172 bits (87), Expect = 1e-39 Identities = 255/311 (81%) Strand = Plus / Minus Query: 303 gattcctgctataacctttccaggtccgagttcatagctcttctcaaggcctttacccaa 362 |||||| || ||||||||||| ||||| ||||||||||| |||| || || || | Sbjct: 1081 gattccagcaataacctttccgggtcccagttcatagcttttcttcagacccttggttag 1022 Query: 363 aagagtcgtcacagtagtctcccattgcacaggagaggttacctgttgtgccaagatctt 422 ||||||| |||| || || |||||||| ||||| || || ||||| ||||||| ||||| Sbjct: 1021 aagagtcttcactgttgtttcccattgaacaggtgaagtaacctggcgtgccaatatctt 962 Query: 423 cttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactgggattct 482 ||| ||||||| |||||||| || |||||||||| ||||||||||| ||||| ||||| Sbjct: 961 ctttattgtgttaggatctgtatgtggctgtgcattcacattggagatgactggtattct 902 Query: 483 cggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggttgcat 542 || | ||| || || || | ||||| || | |||||||||||| ||||| |||| ||| Sbjct: 901 tggggttctgatttctgttgttgccaatgctgcttccaatcttgacacagctggttccat 842 Query: 543 gaagcttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggccttgaaaga 602 || || ||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 841 aaaactagtgtggaaagcaccagcaacagctaggcgcaccgtcattcgagccttgaaaga 782 Query: 603 ctttgctttgg 613 |||||| |||| Sbjct: 781 ctttgccttgg 771
>emb|BX819770.1|CNS0A9DV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS25ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1350 Score = 155 bits (78), Expect = 3e-34 Identities = 201/242 (83%) Strand = Plus / Minus Query: 379 gtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcagga 438 ||||||||||| || ||||| || ||||| |||| | ||||||||||| ||||| ||| Sbjct: 1064 gtctcccattggactggagatgtcacctggcgtgcaagtatcttcttgatcgtgtctgga 1005 Query: 439 tctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcg 498 |||| || ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||| Sbjct: 1004 tctgcatgaggctgtgcatcgacattcgagatcactgggatcctcggacttctgatctct 945 Query: 499 gtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaa 558 ||||| ||||| |||| ||| ||||| ||||| || |||| |||||| || ||||||||| Sbjct: 944 gtagctgccaatgcagcttctaatctcgagactgctggttccatgaaactagtgtggaaa 885 Query: 559 gcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttca 618 ||||| ||||||||||| || |||||||||| || ||||| ||||| |||||||||||| Sbjct: 884 gcacctgcaacagctagacgcaccgtcattcgtgctttgaatgacttagctttggcttca 825 Query: 619 ac 620 || Sbjct: 824 ac 823
>ref|NM_128573.1| Arabidopsis thaliana [acyl-carrier protein] S-malonyltransferase/ transferase AT2G30200 transcript variant AT2G30200.1 mRNA, complete cds Length = 1435 Score = 147 bits (74), Expect = 6e-32 Identities = 200/242 (82%) Strand = Plus / Minus Query: 379 gtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcagga 438 ||||||||||| || ||||| || ||||| |||| | ||||||||||| ||||| ||| Sbjct: 1109 gtctcccattggactggagatgtcacctggcgtgcaagtatcttcttgatcgtgtctgga 1050 Query: 439 tctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcg 498 |||| || ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||| Sbjct: 1049 tctgcatgaggctgtgcatcgacattcgagatcactgggatcctcggacttctgatctct 990 Query: 499 gtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaa 558 || || ||||| |||| ||| ||||| ||||| || |||| |||||| || ||||||||| Sbjct: 989 gtggctgccaatgcagcttctaatctcgagactgctggttccatgaaactagtgtggaaa 930 Query: 559 gcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttca 618 ||||| ||||||||||| || |||||||||| || ||||| ||||| |||||||||||| Sbjct: 929 gcacctgcaacagctagacgcaccgtcattcgtgctttgaatgacttagctttggcttca 870 Query: 619 ac 620 || Sbjct: 869 ac 868
>gb|AY735592.1| Arabidopsis thaliana hypothetical protein AT2G30200 mRNA, complete cds Length = 1344 Score = 147 bits (74), Expect = 6e-32 Identities = 200/242 (82%) Strand = Plus / Minus Query: 379 gtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcagga 438 ||||||||||| || ||||| || ||||| |||| | ||||||||||| ||||| ||| Sbjct: 1076 gtctcccattggactggagatgtcacctggcgtgcaagtatcttcttgatcgtgtctgga 1017 Query: 439 tctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcg 498 |||| || ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||| Sbjct: 1016 tctgcatgaggctgtgcatcgacattcgagatcactgggatcctcggacttctgatctct 957 Query: 499 gtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaa 558 || || ||||| |||| ||| ||||| ||||| || |||| |||||| || ||||||||| Sbjct: 956 gtggctgccaatgcagcttctaatctcgagactgctggttccatgaaactagtgtggaaa 897 Query: 559 gcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttca 618 ||||| ||||||||||| || |||||||||| || ||||| ||||| |||||||||||| Sbjct: 896 gcacctgcaacagctagacgcaccgtcattcgtgctttgaatgacttagctttggcttca 837 Query: 619 ac 620 || Sbjct: 836 ac 835
>gb|AY122949.1| Arabidopsis thaliana putative malonyl-CoA (At2g30200) mRNA, complete cds Length = 1213 Score = 147 bits (74), Expect = 6e-32 Identities = 200/242 (82%) Strand = Plus / Minus Query: 379 gtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcagga 438 ||||||||||| || ||||| || ||||| |||| | ||||||||||| ||||| ||| Sbjct: 1058 gtctcccattggactggagatgtcacctggcgtgcaagtatcttcttgatcgtgtctgga 999 Query: 439 tctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcg 498 |||| || ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||| Sbjct: 998 tctgcatgaggctgtgcatcgacattcgagatcactgggatcctcggacttctgatctct 939 Query: 499 gtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaa 558 || || ||||| |||| ||| ||||| ||||| || |||| |||||| || ||||||||| Sbjct: 938 gtggctgccaatgcagcttctaatctcgagactgctggttccatgaaactagtgtggaaa 879 Query: 559 gcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttca 618 ||||| ||||||||||| || |||||||||| || ||||| ||||| |||||||||||| Sbjct: 878 gcacctgcaacagctagacgcaccgtcattcgtgctttgaatgacttagctttggcttca 819 Query: 619 ac 620 || Sbjct: 818 ac 817
>gb|AY091077.1| Arabidopsis thaliana putative malonyl-CoA:Acyl carrier protein transacylase (At2g30200) mRNA, complete cds Length = 1428 Score = 147 bits (74), Expect = 6e-32 Identities = 200/242 (82%) Strand = Plus / Minus Query: 379 gtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcagga 438 ||||||||||| || ||||| || ||||| |||| | ||||||||||| ||||| ||| Sbjct: 1108 gtctcccattggactggagatgtcacctggcgtgcaagtatcttcttgatcgtgtctgga 1049 Query: 439 tctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcg 498 |||| || ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||| Sbjct: 1048 tctgcatgaggctgtgcatcgacattcgagatcactgggatcctcggacttctgatctct 989 Query: 499 gtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaa 558 || || ||||| |||| ||| ||||| ||||| || |||| |||||| || ||||||||| Sbjct: 988 gtggctgccaatgcagcttctaatctcgagactgctggttccatgaaactagtgtggaaa 929 Query: 559 gcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttca 618 ||||| ||||||||||| || |||||||||| || ||||| ||||| |||||||||||| Sbjct: 928 gcacctgcaacagctagacgcaccgtcattcgtgctttgaatgacttagctttggcttca 869 Query: 619 ac 620 || Sbjct: 868 ac 867
>emb|BX820752.1|CNS0A81Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1324 Score = 147 bits (74), Expect = 6e-32 Identities = 200/242 (82%) Strand = Plus / Minus Query: 379 gtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcagga 438 ||||||||||| || ||||| || ||||| |||| | ||||||||||| ||||| ||| Sbjct: 1046 gtctcccattggactggagatgtcacctggcgtgcaagtatcttcttgatcgtgtctgga 987 Query: 439 tctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcg 498 |||| || ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||| Sbjct: 986 tctgcatgaggctgtgcatcgacattcgagatcactgggatcctcggacttctgatctct 927 Query: 499 gtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaa 558 || || ||||| |||| ||| ||||| ||||| || |||| |||||| || ||||||||| Sbjct: 926 gtggctgccaatgcagcttctaatctcgagactgctggttccatgaaactagtgtggaaa 867 Query: 559 gcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttca 618 ||||| ||||||||||| || |||||||||| || ||||| ||||| |||||||||||| Sbjct: 866 gcacctgcaacagctagacgcaccgtcattcgtgctttgaatgacttagctttggcttca 807 Query: 619 ac 620 || Sbjct: 806 ac 805
>gb|AY086952.1| Arabidopsis thaliana clone 299 mRNA, complete sequence Length = 1436 Score = 147 bits (74), Expect = 6e-32 Identities = 200/242 (82%) Strand = Plus / Minus Query: 379 gtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcagga 438 ||||||||||| || ||||| || ||||| |||| | ||||||||||| ||||| ||| Sbjct: 1109 gtctcccattggactggagatgtcacctggcgtgcaagtatcttcttgatcgtgtctgga 1050 Query: 439 tctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcg 498 |||| || ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||| Sbjct: 1049 tctgcatgaggctgtgcatcgacattcgagatcactgggatcctcggacttctgatctct 990 Query: 499 gtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaa 558 || || ||||| |||| ||| ||||| ||||| || |||| |||||| || ||||||||| Sbjct: 989 gtggctgccaatgcagcttctaatctcgagactgctggttccatgaaactagtgtggaaa 930 Query: 559 gcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttca 618 ||||| ||||||||||| || |||||||||| || ||||| ||||| |||||||||||| Sbjct: 929 gcacctgcaacagctagacgcaccgtcattcgtgctttgaatgacttagctttggcttca 870 Query: 619 ac 620 || Sbjct: 869 ac 868
>gb|AY924753.1| Arabidopsis thaliana hypothetical protein (At2g30200) mRNA, complete cds Length = 1182 Score = 147 bits (74), Expect = 6e-32 Identities = 200/242 (82%) Strand = Plus / Minus Query: 379 gtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcagga 438 ||||||||||| || ||||| || ||||| |||| | ||||||||||| ||||| ||| Sbjct: 1058 gtctcccattggactggagatgtcacctggcgtgcaagtatcttcttgatcgtgtctgga 999 Query: 439 tctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcg 498 |||| || ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||| Sbjct: 998 tctgcatgaggctgtgcatcgacattcgagatcactgggatcctcggacttctgatctct 939 Query: 499 gtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaa 558 || || ||||| |||| ||| ||||| ||||| || |||| |||||| || ||||||||| Sbjct: 938 gtggctgccaatgcagcttctaatctcgagactgctggttccatgaaactagtgtggaaa 879 Query: 559 gcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttca 618 ||||| ||||||||||| || |||||||||| || ||||| ||||| |||||||||||| Sbjct: 878 gcacctgcaacagctagacgcaccgtcattcgtgctttgaatgacttagctttggcttca 819 Query: 619 ac 620 || Sbjct: 818 ac 817
>ref|NM_201835.2| Arabidopsis thaliana transferase AT2G30200 transcript variant AT2G30200.2 mRNA, complete cds Length = 1652 Score = 141 bits (71), Expect = 4e-30 Identities = 170/203 (83%) Strand = Plus / Minus Query: 418 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 477 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1305 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 1246 Query: 478 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 537 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 1245 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 1186 Query: 538 tgcatgaagcttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggccttg 597 | |||||| || |||||||||||||| ||||||||||| || |||||||||| || ||| Sbjct: 1185 tccatgaaactagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgctttg 1126 Query: 598 aaagactttgctttggcttcaac 620 || ||||| |||||||||||||| Sbjct: 1125 aatgacttagctttggcttcaac 1103
>emb|BX821339.1|CNS0A99X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL34ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1357 Score = 141 bits (71), Expect = 4e-30 Identities = 170/203 (83%) Strand = Plus / Minus Query: 418 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 477 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1056 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 997 Query: 478 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 537 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 996 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 937 Query: 538 tgcatgaagcttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggccttg 597 | |||||| || |||||||||||||| ||||||||||| || |||||||||| || ||| Sbjct: 936 tccatgaaactagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgctttg 877 Query: 598 aaagactttgctttggcttcaac 620 || ||||| |||||||||||||| Sbjct: 876 aatgacttagctttggcttcaac 854
>emb|BX820581.1|CNS0A9LF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1356 Score = 139 bits (70), Expect = 1e-29 Identities = 199/242 (82%) Strand = Plus / Minus Query: 379 gtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcagga 438 ||||||||||| || ||||| || ||||| |||| | ||||||||||| ||||| ||| Sbjct: 1077 gtctcccattggactggagatgtcacctggcgtgcaagtatcttcttgatcgtgtctgga 1018 Query: 439 tctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcg 498 |||| || |||||| |||| ||||| ||||| |||||||| ||||| ||| ||||| Sbjct: 1017 tctgcatgaggctgttcatcgacattcgagatcactgggatcctcggacttctgatctct 958 Query: 499 gtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaa 558 || || ||||| |||| ||| ||||| ||||| || |||| |||||| || ||||||||| Sbjct: 957 gtggctgccaatgcagcttctaatctcgagactgctggttccatgaaactagtgtggaaa 898 Query: 559 gcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttca 618 ||||| ||||||||||| || |||||||||| || ||||| ||||| |||||||||||| Sbjct: 897 gcacctgcaacagctagacgcaccgtcattcgtgctttgaatgacttagctttggcttca 838 Query: 619 ac 620 || Sbjct: 837 ac 836
>emb|BX820262.1|CNS0A9J5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH14ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1310 Score = 131 bits (66), Expect = 4e-27 Identities = 198/242 (81%) Strand = Plus / Minus Query: 379 gtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcagga 438 ||||||||||| || ||||| || ||||| |||| || ||||||||||| ||||| ||| Sbjct: 1049 gtctcccattggactggagatgtcacctggcgtgcaaatatcttcttgatcgtgtctgga 990 Query: 439 tctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcg 498 |||| || |||||| |||| ||||| ||||| |||||||| ||||| ||| ||||| Sbjct: 989 tctgcatgaggctgtacatcgacattcgagatcactgggatcctcggacttctgatctct 930 Query: 499 gtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaa 558 ||||| ||||| |||| ||| ||||| ||||| || |||| ||||| || || |||||| Sbjct: 929 gtagctgccaatgcagcttctaatctcgagactgctggttccatgagactagtatggaaa 870 Query: 559 gcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttca 618 ||||| |||||||||| || |||||||||| || ||||| ||||| |||||||||||| Sbjct: 869 gcaccttcaacagctagacgcaccgtcattcgtgctttgaatgacttagctttggcttca 810 Query: 619 ac 620 || Sbjct: 809 ac 808
>emb|BX820991.1|CNS0A9LT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1325 Score = 117 bits (59), Expect = 5e-23 Identities = 167/203 (82%) Strand = Plus / Minus Query: 418 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 477 ||||||||||| ||||| ||||||| | |||||||||| ||||| ||||| |||||| Sbjct: 978 atcttcttgatcgtgtctggatctgcattttgctgtgcatcgacattcgagatcactggg 919 Query: 478 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 537 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 918 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 859 Query: 538 tgcatgaagcttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggccttg 597 | |||||| || |||||||||||||| |||||||| || || |||||||||| || ||| Sbjct: 858 tccatgaaactagtgtggaaagcacctgcaacagcgagacgcaccgtcattcgtgctttg 799 Query: 598 aaagactttgctttggcttcaac 620 || ||||| |||||||||||||| Sbjct: 798 aatgacttagctttggcttcaac 776
>gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E13 map m283, complete sequence Length = 83796 Score = 107 bits (54), Expect = 5e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 418 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 477 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 22142 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 22083 Query: 478 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 537 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 22082 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 22023 Query: 538 tgcatgaagcttgtgtggaaagcaccagcaacagctag 575 | |||||| || |||||||||||||| ||||||||||| Sbjct: 22022 tccatgaaactagtgtggaaagcacctgcaacagctag 21985 Score = 42.1 bits (21), Expect = 2.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 580 accgtcattctggccttgaaagactttgctttggcttcaac 620 |||||||||| || ||||| ||||| |||||||||||||| Sbjct: 21895 accgtcattcgtgctttgaatgacttagctttggcttcaac 21855
>emb|BX820473.1|CNS0A9OH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZE12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1331 Score = 85.7 bits (43), Expect = 2e-13 Identities = 167/207 (80%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 379 gtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgtcagga 438 ||||||||||| || ||||| || ||||| |||| | ||||||||||| ||||| ||| Sbjct: 1068 gtctcccattggactggagatgtcacctggcgtgcaagtatcttcttgatcgtgtctgga 1009 Query: 439 tctgagtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcg 498 |||| || ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||| Sbjct: 1008 tctgcatgaggctgtgcatcgacattcgagatcactgggatcctcggacttctgatctct 949 Query: 499 gtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtgg-aa 557 || || ||||| |||| | ||||| ||||| || |||| |||||| || |||||| || Sbjct: 948 gtggctgccaatgcagctaaaaatctcgagactgctggttccatgaaactagtgtggcaa 889 Query: 558 agcaccagcaacagctaggcgaaccgt 584 |||||| ||||||||||| || ||||| Sbjct: 888 agcacctgcaacagctagacgcaccgt 862
>gb|AY108033.1| Zea mays PCO095766 mRNA sequence Length = 892 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 661 ccaggacagagaaagtttgctatttgaactctttccttttcatccacgtcctcatttgca 720 ||||| || ||||||||||||||||||||||| || |||||||| || || ||||| ||| Sbjct: 885 ccagggcacagaaagtttgctatttgaactctatcgttttcatctacttcgtcattagca 826 Query: 721 gcatcgcataattgttgcaccttttct 747 ||||| |||| || ||||||||||||| Sbjct: 825 gcatcacatagttcttgcaccttttct 799
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 81.8 bits (41), Expect = 3e-12 Identities = 63/69 (91%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 679 gctatttgaactctttccttttcatccacgtcctcatttgcagcatcgcataattgttgc 738 ||||||||||||||||| |||||||| || || ||||| ||||||||||||||||||||| Sbjct: 139195 gctatttgaactctttctttttcatctacttcgtcatt-gcagcatcgcataattgttgc 139253 Query: 739 accttttct 747 ||| ||||| Sbjct: 139254 accgtttct 139262 Score = 50.1 bits (25), Expect = 0.011 Identities = 34/37 (91%) Strand = Plus / Plus Query: 614 cttcaactgcttcaatacccttcacaccaccagaaac 650 |||||||| ||||||||||||||||| ||||| |||| Sbjct: 139060 cttcaacttcttcaatacccttcacatcaccacaaac 139096
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 3e-12 Identities = 63/69 (91%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 679 gctatttgaactctttccttttcatccacgtcctcatttgcagcatcgcataattgttgc 738 ||||||||||||||||| |||||||| || || ||||| ||||||||||||||||||||| Sbjct: 13455732 gctatttgaactctttctttttcatctacttcgtcatt-gcagcatcgcataattgttgc 13455790 Query: 739 accttttct 747 ||| ||||| Sbjct: 13455791 accgtttct 13455799 Score = 50.1 bits (25), Expect = 0.011 Identities = 34/37 (91%) Strand = Plus / Plus Query: 614 cttcaactgcttcaatacccttcacaccaccagaaac 650 |||||||| ||||||||||||||||| ||||| |||| Sbjct: 13455597 cttcaacttcttcaatacccttcacatcaccacaaac 13455633
>gb|AF210698.1|AF210698 Perilla frutescens malonyl-CoA:ACP transacylase (MCT) mRNA, complete cds Length = 1367 Score = 75.8 bits (38), Expect = 2e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 520 aatcttgagacagcaggttgcatgaagcttgtgtggaaagcaccagcaacagctaggcga 579 |||||||| || ||||| | ||| || | |||||||||||| ||||| ||||||| || Sbjct: 871 aatcttgacacggcaggctccataaaacctgtgtggaaagctccagctacagctaaccgg 812 Query: 580 accgtcattctggccttgaaagactttgctttggcttcaactgcttcaat 629 |||||||||| |||||||| || ||||| || ||||||||||||||||| Sbjct: 811 accgtcattcgagccttgaatgattttgcctttgcttcaactgcttcaat 762 Score = 44.1 bits (22), Expect = 0.66 Identities = 70/86 (81%) Strand = Plus / Minus Query: 259 gcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgctataacc 318 ||||| ||||||||||| |||||||||| |||| ||| | ||||| ||||| ||| Sbjct: 1132 gcaccgatgttctcgatcgcagcacctttgtccatccttttcacaattcccgctatgacc 1073 Query: 319 tttccaggtccgagttcatagctctt 344 ||||||||||| | |||||| ||||| Sbjct: 1072 tttccaggtcccaattcataactctt 1047
>emb|AJ430374.1|SLA430374 Silene latifolia partial mRNA from Men-524 gene Length = 285 Score = 75.8 bits (38), Expect = 2e-10 Identities = 151/186 (81%), Gaps = 2/186 (1%) Strand = Plus / Minus Query: 255 tcatgcaccaatgttctcgat-gctggcacctttgttgatccgtttaatgattcctgcta 313 |||||||| |||||||||||| |||| || |||||| ||| | || ||||| || || | Sbjct: 198 tcatgcactaatgttctcgattgctg-cagctttgtcgattctcttcatgatccccgcaa 140 Query: 314 taacctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtca 373 | |||||||||||||| | |||||||||||||| | ||||| || ||||||| ||| Sbjct: 139 ttacctttccaggtcccaattcatagctcttcttcaatcctttgttcagaagagtcttca 80 Query: 374 cagtagtctcccattgcacaggagaggttacctgttgtgccaagatcttcttgattgtgt 433 || |||||||||||||||||||| || |||||| | |||| |||||||| || |||| Sbjct: 79 gtgttgtctcccattgcacaggagaagtcacctgtcgagccagtatcttcttaatggtgt 20 Query: 434 caggat 439 |||||| Sbjct: 19 caggat 14
>emb|BX820825.1|CNS0A9IH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH72ZF06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1328 Score = 67.9 bits (34), Expect = 5e-08 Identities = 140/174 (80%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 448 ggctgtgcatcaacattggagattactgggattctcggtgatctaatctcggtagcagcc 507 ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||| || | ||| Sbjct: 1008 ggctgtgcatcgacattcgagatcactgggatcctcggacttctgatctctgtggttgcc 949 Query: 508 aacgcagattccaatcttgagacagcaggttgcatgaagcttgtgtggaaagcaccagca 567 || |||| ||| ||||| ||||| || |||| |||||| || ||||||| || ||| || Sbjct: 948 aatgcagcttctaatctcgagactgctggttccatgaaactagtgtggatagtaccttca 889 Query: 568 acagctaggcgaaccgtcattctggccttgaaagactttg-ctttggcttcaac 620 |||||||| | |||||||||| || ||||| ||||| | ||||||||||||| Sbjct: 888 acagctagatgcaccgtcattcgtgctttgaatgacttagtctttggcttcaac 835
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 622 gcttcaatacccttcacaccaccagaaactgcata 656 |||||||| ||||||||||||| |||||||||||| Sbjct: 13023230 gcttcaatccccttcacaccactagaaactgcata 13023196
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0688H12 Length = 139279 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 622 gcttcaatacccttcacaccaccagaaactgcata 656 |||||||| ||||||||||||| |||||||||||| Sbjct: 132873 gcttcaatccccttcacaccactagaaactgcata 132839
>gb|AY254314.1| Hemiselmis virescens malonyl-CoA:ACP transacylase (fabD) gene, partial cds; nuclear gene for plastid product Length = 688 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 550 gtgtggaaagcaccagcaacagctaggcgaaccgtcattctggccttgaa 599 ||||||||||||||||| ||||| ||| | |||||||| | ||||||||| Sbjct: 591 gtgtggaaagcaccagccacagcgagggggaccgtcatgcgggccttgaa 542
>emb|CR388204.7| Zebrafish DNA sequence from clone CH211-250C23 in linkage group 4, complete sequence Length = 12449 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Plus Query: 529 acagcaggttgcatgaagcttgt 551 ||||||||||||||||||||||| Sbjct: 1980 acagcaggttgcatgaagcttgt 2002
>gb|AC007621.34| Homo sapiens 12 BAC RP11-757G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 144000 Score = 46.1 bits (23), Expect = 0.17 Identities = 26/27 (96%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggctt 616 ||||||| ||||||||||||||||||| Sbjct: 119200 tggcctttaaagactttgctttggctt 119174
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Plus Query: 609 tttggcttcaactgcttcaata 630 |||||||||||||||||||||| Sbjct: 6316571 tttggcttcaactgcttcaata 6316592
>gb|AC017048.6| Homo sapiens BAC clone RP11-324L17 from 2, complete sequence Length = 186373 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 378 agtctcccattgcacaggagag 399 |||||||||||||||||||||| Sbjct: 60687 agtctcccattgcacaggagag 60666
>ref|XM_521892.1| PREDICTED: Pan troglodytes similar to Rpl23a protein (LOC466493), mRNA Length = 471 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 73 tggcctttaaagcctttgctttggcttca 45
>ref|XM_583734.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 1 (LOC507168), mRNA Length = 508 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 73 tggccttcaaagcctttgctttggcttca 45
>ref|XM_864088.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2 (LOC507168), mRNA Length = 538 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 73 tggccttcaaagcctttgctttggcttca 45
>ref|XM_871857.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 4 (LOC516176), mRNA Length = 533 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 90 tggccttcaaagcctttgctttggcttca 62
>ref|XM_871768.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 3 (LOC516176), mRNA Length = 538 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 90 tggccttcaaagcctttgctttggcttca 62
>ref|XM_594319.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 1 (LOC516176), mRNA Length = 541 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 78 tggccttcaaagcctttgctttggcttca 50
>ref|XM_863859.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2 (LOC516176), mRNA Length = 553 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 90 tggccttcaaagcctttgctttggcttca 62
>ref|XM_873448.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2 (LOC614643), mRNA Length = 544 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 83 tggccttcaaagcctttgctttggcttca 55
>ref|XM_864494.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 1 (LOC614643), mRNA Length = 531 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 83 tggccttcaaagcctttgctttggcttca 55
>ref|XM_873326.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 5 (LOC511712), mRNA Length = 532 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_873228.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 4 (LOC511712), mRNA Length = 529 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_873124.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 3 (LOC511712), mRNA Length = 529 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_873022.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2 (LOC511712), mRNA Length = 524 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_589100.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 1 (LOC511712), mRNA Length = 559 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_878778.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 4 (LOC615028), mRNA Length = 531 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_878746.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 3 (LOC615028), mRNA Length = 531 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_878716.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2 (LOC615028), mRNA Length = 542 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 77 tggccttcaaagcctttgctttggcttca 49
>ref|XM_866556.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 1 (LOC615028), mRNA Length = 554 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_882175.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 3 (LOC615608), mRNA Length = 710 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 80 tggccttcaaagcctttgctttggcttca 52
>ref|XM_868968.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2 (LOC615608), mRNA Length = 530 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 88 tggccttcaaagcctttgctttggcttca 60
>ref|XM_874719.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 4 (LOC514181), mRNA Length = 523 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 84 tggccttcaaagcctttgctttggcttca 56
>ref|XM_874636.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 3 (LOC514181), mRNA Length = 530 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 84 tggccttcaaagcctttgctttggcttca 56
>ref|XM_591988.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 1 (LOC514181), mRNA Length = 546 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 84 tggccttcaaagcctttgctttggcttca 56
>ref|XM_603720.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a (LOC525367), mRNA Length = 537 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 82 tggccttcaaagcctttgctttggcttca 54
>ref|XM_868944.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a (LOC616830), mRNA Length = 545 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 84 tggccttcaaagcctttgctttggcttca 56
>ref|XM_867538.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a (LOC615671), mRNA Length = 487 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 73 tggccttcaaagcctttgctttggcttca 45
>gb|BC114200.1| Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2, mRNA (cDNA clone MGC:140350 IMAGE:8187616), complete cds Length = 615 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 86 tggccttcaaagcctttgctttggcttca 58
>emb|AL390140.1|HSM802785 Homo sapiens genomic DNA; cDNA DKFZp547I014 (from clone DKFZp547I014) Length = 2302 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 1847 tggcctttaaagcctttgctttggcttca 1819
>gb|AC004034.2| Homo sapiens chromosome 16 clone LA16c-321D4, complete sequence Length = 37718 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 24384 tggcctttaaagcctttgctttggcttca 24356
>ref|NR_002229.1| Homo sapiens ribosomal protein L23a pseudogene 13 (RPL23AP13) on chromosome 2 Length = 2302 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 1847 tggcctttaaagcctttgctttggcttca 1819
>gb|AC011811.42| Homo sapiens clone b250a12, complete sequence Length = 231739 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 178099 tggccttcaaagcctttgctttggcttca 178127
>gb|AC104634.5| Homo sapiens BAC clone RP11-793L24 from 2, complete sequence Length = 115758 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 27581 tggccttcaaagcctttgctttggcttca 27553
>gb|AF043642.1|AF043642 Rattus norvegicus matrin cyclophilin (matrin-cyp) mRNA, complete cds Length = 3964 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 tggggctgtgcatcaacattg 465 ||||||||||||||||||||| Sbjct: 1137 tggggctgtgcatcaacattg 1117
>gb|AC092839.4| Homo sapiens BAC clone RP11-257N16 from 2, complete sequence Length = 186464 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 151912 tggcctttaaagcctttgctttggcttca 151884
>gb|AC068205.25| Homo sapiens chromosome 11, clone RP11-472I20, complete sequence Length = 205069 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 144220 tggcctttaaagcctttgctttggcttca 144192
>ref|XM_579532.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_031793 (LOC497773), mRNA Length = 3926 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 tggggctgtgcatcaacattg 465 ||||||||||||||||||||| Sbjct: 1143 tggggctgtgcatcaacattg 1123
>gb|BC085723.1| Rattus norvegicus peptidylprolyl isomerase G, mRNA (cDNA clone MGC:93333 IMAGE:7123868), complete cds Length = 2892 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 tggggctgtgcatcaacattg 465 ||||||||||||||||||||| Sbjct: 1183 tggggctgtgcatcaacattg 1163
>emb|BX469913.15| Zebrafish DNA sequence from clone DKEY-237G5 in linkage group 20, complete sequence Length = 196927 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gtacattcaggacagttgctt 193 ||||||||||||||||||||| Sbjct: 106974 gtacattcaggacagttgctt 106994
>gb|BC096740.1| Homo sapiens ribosomal protein L23a pseudogene 13, mRNA (cDNA clone MGC:120121 IMAGE:40021995), complete cds Length = 565 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 197 tggcctttaaagcctttgctttggcttca 169
>gb|BC098172.1| Homo sapiens ribosomal protein L23a pseudogene 13, mRNA (cDNA clone MGC:120120 IMAGE:40021993), complete cds Length = 565 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 197 tggcctttaaagcctttgctttggcttca 169
>gb|BC096706.1| Homo sapiens ribosomal protein L23a pseudogene 13, mRNA (cDNA clone MGC:120119 IMAGE:40021992), complete cds Length = 565 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 590 tggccttgaaagactttgctttggcttca 618 ||||||| |||| |||||||||||||||| Sbjct: 197 tggcctttaaagcctttgctttggcttca 169
>emb|BX897729.6| Zebrafish DNA sequence from clone DKEY-240A12 in linkage group 4, complete sequence Length = 201932 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 529 acagcaggttgcatgaagctt 549 ||||||||||||||||||||| Sbjct: 201912 acagcaggttgcatgaagctt 201932
>ref|NM_031793.1| Rattus norvegicus peptidylprolyl isomerase G (Ppig), mRNA Length = 3964 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 tggggctgtgcatcaacattg 465 ||||||||||||||||||||| Sbjct: 1137 tggggctgtgcatcaacattg 1117
>dbj|AB084472.1| Triakis scyllium mRNA for beta actin, complete cds Length = 1703 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 agttcatagctcttctcaagg 351 ||||||||||||||||||||| Sbjct: 814 agttcatagctcttctcaagg 794 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,262,951 Number of Sequences: 3902068 Number of extensions: 6262951 Number of successful extensions: 110711 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110404 Number of HSP's gapped (non-prelim): 299 length of query: 747 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 724 effective length of database: 17,143,297,704 effective search space: 12411747537696 effective search space used: 12411747537696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)