ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd19b04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_493874.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 634 bits (320), Expect = e-179 Identities = 491/548 (89%) Strand = Plus / Minus Query: 130 ggcacagtaggcagtcccatttcatcctcctgctgccggttcgccgggactgctgcatga 189 ||||| || |||| ||||| ||| ||||||||||||||||| | ||| | | || ||| Sbjct: 776 ggcactgtcggcaatcccaattcgtcctcctgctgccggtttggtggggcgggtgtgtga 717 Query: 190 ccacttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttgg 249 || ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 716 cccgttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttga 657 Query: 250 aggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctcg 309 |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 656 aggtacgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctcc 597 Query: 310 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 369 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 596 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 537 Query: 370 tgtatttcattgctcacatccataagatccatcatctcgtcttgcatgctatctatatct 429 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 536 tgtatttcattgctcacatccataagatccatcatctcgtcttgcaagctatctatatct 477 Query: 430 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 489 |||| | ||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 476 tcaagcttgacagttttcatcattcctttcagctctttattggctgccttcattgcagtc 417 Query: 490 atagtctgttgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataa 549 || || || ||||||||||||| |||||| || |||||||||||||||||||| ||||| Sbjct: 416 atcgtttgctgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatat 357 Query: 550 gtttggttgtacagcatgtcgcgctgtccttcatacatcttgcgctgcttgaggatcctc 609 |||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||| |||| Sbjct: 356 gtttggttgtacagcatgtcacgctgcccttcgtacattctgcgctgcttgaggaccctc 297 Query: 610 atggcgcgggccttgacggcctcctgcgcggggcccggcctggtcttcttgatctgctcc 669 |||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 296 atggcgcgtgccttgatggcctcctgggcggggcctggcctggtcttcttgatctggtcc 237 Query: 670 ttgtagcg 677 |||||||| Sbjct: 236 ttgtagcg 229
>dbj|AK104101.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H05, full insert sequence Length = 1005 Score = 634 bits (320), Expect = e-179 Identities = 491/548 (89%) Strand = Plus / Minus Query: 130 ggcacagtaggcagtcccatttcatcctcctgctgccggttcgccgggactgctgcatga 189 ||||| || |||| ||||| ||| ||||||||||||||||| | ||| | | || ||| Sbjct: 766 ggcactgtcggcaatcccaattcgtcctcctgctgccggtttggtggggcgggtgtgtga 707 Query: 190 ccacttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttgg 249 || ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 706 cccgttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttga 647 Query: 250 aggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctcg 309 |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 646 aggtacgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctcc 587 Query: 310 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 369 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 586 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 527 Query: 370 tgtatttcattgctcacatccataagatccatcatctcgtcttgcatgctatctatatct 429 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 526 tgtatttcattgctcacatccataagatccatcatctcgtcttgcaagctatctatatct 467 Query: 430 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 489 |||| | ||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 466 tcaagcttgacagttttcatcattcctttcagctctttattggctgccttcattgcagtc 407 Query: 490 atagtctgttgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataa 549 || || || ||||||||||||| |||||| || |||||||||||||||||||| ||||| Sbjct: 406 atcgtttgctgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatat 347 Query: 550 gtttggttgtacagcatgtcgcgctgtccttcatacatcttgcgctgcttgaggatcctc 609 |||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||| |||| Sbjct: 346 gtttggttgtacagcatgtcacgctgcccttcgtacattctgcgctgcttgaggaccctc 287 Query: 610 atggcgcgggccttgacggcctcctgcgcggggcccggcctggtcttcttgatctgctcc 669 |||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 286 atggcgcgtgccttgatggcctcctgggcggggcctggcctggtcttcttgatctggtcc 227 Query: 670 ttgtagcg 677 |||||||| Sbjct: 226 ttgtagcg 219
>dbj|AK065749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042C01, full insert sequence Length = 1112 Score = 634 bits (320), Expect = e-179 Identities = 491/548 (89%) Strand = Plus / Minus Query: 130 ggcacagtaggcagtcccatttcatcctcctgctgccggttcgccgggactgctgcatga 189 ||||| || |||| ||||| ||| ||||||||||||||||| | ||| | | || ||| Sbjct: 858 ggcactgtcggcaatcccaattcgtcctcctgctgccggtttggtggggcgggtgtgtga 799 Query: 190 ccacttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttgg 249 || ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 798 cccgttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttga 739 Query: 250 aggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctcg 309 |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 738 aggtacgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctcc 679 Query: 310 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 369 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 678 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 619 Query: 370 tgtatttcattgctcacatccataagatccatcatctcgtcttgcatgctatctatatct 429 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 618 tgtatttcattgctcacatccataagatccatcatctcgtcttgcaagctatctatatct 559 Query: 430 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 489 |||| | ||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 558 tcaagcttgacagttttcatcattcctttcagctctttattggctgccttcattgcagtc 499 Query: 490 atagtctgttgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataa 549 || || || ||||||||||||| |||||| || |||||||||||||||||||| ||||| Sbjct: 498 atcgtttgctgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatat 439 Query: 550 gtttggttgtacagcatgtcgcgctgtccttcatacatcttgcgctgcttgaggatcctc 609 |||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||| |||| Sbjct: 438 gtttggttgtacagcatgtcacgctgcccttcgtacattctgcgctgcttgaggaccctc 379 Query: 610 atggcgcgggccttgacggcctcctgcgcggggcccggcctggtcttcttgatctgctcc 669 |||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 378 atggcgcgtgccttgatggcctcctgggcggggcctggcctggtcttcttgatctggtcc 319 Query: 670 ttgtagcg 677 |||||||| Sbjct: 318 ttgtagcg 311
>dbj|AK061764.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B05, full insert sequence Length = 1005 Score = 634 bits (320), Expect = e-179 Identities = 491/548 (89%) Strand = Plus / Minus Query: 130 ggcacagtaggcagtcccatttcatcctcctgctgccggttcgccgggactgctgcatga 189 ||||| || |||| ||||| ||| ||||||||||||||||| | ||| | | || ||| Sbjct: 766 ggcactgtcggcaatcccaattcgtcctcctgctgccggtttggtggggcgggtgtgtga 707 Query: 190 ccacttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttgg 249 || ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 706 cccgttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttga 647 Query: 250 aggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctcg 309 |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 646 aggtacgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctcc 587 Query: 310 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 369 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 586 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 527 Query: 370 tgtatttcattgctcacatccataagatccatcatctcgtcttgcatgctatctatatct 429 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 526 tgtatttcattgctcacatccataagatccatcatctcgtcttgcaagctatctatatct 467 Query: 430 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 489 |||| | ||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 466 tcaagcttgacagttttcatcattcctttcagctctttattggctgccttcattgcagtc 407 Query: 490 atagtctgttgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataa 549 || || || ||||||||||||| |||||| || |||||||||||||||||||| ||||| Sbjct: 406 atcgtttgctgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatat 347 Query: 550 gtttggttgtacagcatgtcgcgctgtccttcatacatcttgcgctgcttgaggatcctc 609 |||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||| |||| Sbjct: 346 gtttggttgtacagcatgtcacgctgcccttcgtacattctgcgctgcttgaggaccctc 287 Query: 610 atggcgcgggccttgacggcctcctgcgcggggcccggcctggtcttcttgatctgctcc 669 |||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 286 atggcgcgtgccttgatggcctcctgggcggggcctggcctggtcttcttgatctggtcc 227 Query: 670 ttgtagcg 677 |||||||| Sbjct: 226 ttgtagcg 219
>gb|AY108730.1| Zea mays PCO062079 mRNA sequence Length = 1178 Score = 543 bits (274), Expect = e-151 Identities = 403/446 (90%) Strand = Plus / Minus Query: 240 gtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagc 299 ||||||||||||||| ||||||||||| | ||||| |||||||| |||||||||||||| Sbjct: 764 gtctggttggaggtaagatgggactgactctgattcgaagtccatgtcggcttccaaagc 705 Query: 300 atcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttctacc 359 ||| ||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||| || Sbjct: 704 atcgagctcccccataagttcttcctcatcgatgtcatctgggacgttgtagcttctgcc 645 Query: 360 aagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcatgct 419 ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| || Sbjct: 644 aagagtttcttgtatttcagtgctcacatccataagatccatcatctcatcttgcatact 585 Query: 420 atctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagcctt 479 ||| |||||||| | | ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 584 atcaatatcttcgagcttgacagttttcatcatccctttgagctctttattggcagcctt 525 Query: 480 cattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttggtc 539 ||| ||||||||||| || ||||||||||||| |||||| | |||||||||||||||||| Sbjct: 524 catcgcagtcatagtttgctgagcatctttaagtccctctgccgcaaaagcaacttggtc 465 Query: 540 aagattataagtttggttgtacagcatgtcgcgctgtccttcatacatcttgcgctgctt 599 ||| ||||| ||||||||||| |||||||| ||||| ||||| |||||| |||||||||| Sbjct: 464 aaggttatatgtttggttgtagagcatgtcacgctgcccttcgtacatcctgcgctgctt 405 Query: 600 gaggatcctcatggcgcgggccttgacggcctcctgcgcggggcccggcctggtcttctt 659 ||||| ||||||||| || ||||||||||||||||| |||||||| || | |||||||| Sbjct: 404 gaggaccctcatggctcgtgccttgacggcctcctgagcggggcctgggcgcgtcttctt 345 Query: 660 gatctgctccttgtagcgcgccagct 685 ||||||||||||||||||||| |||| Sbjct: 344 gatctgctccttgtagcgcgcgagct 319 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 112 gtacgaattgacgcgtgcggcacagtaggcagtcccatttcatcctcctgctgccggttc 171 |||||||| || || || ||||| ||||||| ||| | ||||||||||||||| |||| Sbjct: 880 gtacgaatggatgcttgtggcactgtaggcaatcctagctcatcctcctgctgctggttt 821 Query: 172 gccgggactgctgcatgaccacttggtgcagcaggtaag 210 ||||||||||||||||| ||| ||||||||||||||||| Sbjct: 820 gccgggactgctgcatggccagttggtgcagcaggtaag 782
>dbj|AK108287.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-D09, full insert sequence Length = 1018 Score = 220 bits (111), Expect = 5e-54 Identities = 361/443 (81%), Gaps = 6/443 (1%) Strand = Plus / Minus Query: 235 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 294 |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || ||| Sbjct: 644 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 585 Query: 295 aaagcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagctt 354 |||||||| || || ||||| ||||| ||||| || | || || |||| ||||||||| Sbjct: 584 aaagcatccagttctcccattagttcttcctcatcaacatcgtcagggatgttgtagctt 525 Query: 355 ctaccaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgc 414 |||||||| | |||||||||||| |||||||||||||| || || ||||||| |||||| Sbjct: 524 ctaccaagggattcttgtatttcgttgctcacatccatcaggtcagtcatctcatcttgc 465 Query: 415 atgctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggca 474 || |||| || || |||||| |||| ||||||||||| || || |||||||||||||| Sbjct: 464 atattatcgatgtcctcaatcttgactgtcttcatcatacccttgagctctttattggcg 405 Query: 475 gccttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaact 534 |||||||| ||| |||| ||||| ||||| ||||| | || || | || ||||| ||| Sbjct: 404 gccttcatggcattcatggtctgctgagcgtctttgaggccatcggcagcgaaagcgact 345 Query: 535 tggtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacat---cttg 591 ||||| |||||||| || |||||||| ||||||| ||||||| |||| ||||| |||| Sbjct: 344 tggtcgagattataggtctggttgtagagcatgttgcgctgttcttcgtacatgcgcttg 285 Query: 592 cgctgcttgaggatcctcatggcgcgggccttgacggcctcctgcgcggggcccggcctg 651 |||||||| | ||| |||||||||||||| | ||| ||||| | ||| || || | Sbjct: 284 ---tgcttgagaagcctgatggcgcgggccttaatggcgtcctgggagggtccagggcgt 228 Query: 652 gtcttcttgatctgctccttgta 674 |||||| |||||||||||||||| Sbjct: 227 gtcttcctgatctgctccttgta 205
>ref|XM_549823.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1018 Score = 212 bits (107), Expect = 1e-51 Identities = 360/443 (81%), Gaps = 6/443 (1%) Strand = Plus / Minus Query: 235 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 294 |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || ||| Sbjct: 644 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 585 Query: 295 aaagcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagctt 354 |||||||| || || ||||| ||||| ||||| || | || || |||| ||||||||| Sbjct: 584 aaagcatccagttctcccattagttcttcctcatcaacatcgtcagggatgttgtagctt 525 Query: 355 ctaccaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgc 414 |||||||| | |||||||||||| |||||||||||||| || || |||| || |||||| Sbjct: 524 ctaccaagggattcttgtatttcgttgctcacatccatcaggtcagtcatttcatcttgc 465 Query: 415 atgctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggca 474 || |||| || || |||||| |||| ||||||||||| || || |||||||||||||| Sbjct: 464 atattatcgatgtcctcaatcttgactgtcttcatcattcccttgagctctttattggcg 405 Query: 475 gccttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaact 534 |||||||| ||| |||| ||||| ||||| ||||| | || || | || ||||| ||| Sbjct: 404 gccttcatggcattcatggtctgctgagcgtctttgaggccatcggcagcgaaagcgact 345 Query: 535 tggtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacat---cttg 591 ||||| |||||||| || |||||||| ||||||| ||||||| |||| ||||| |||| Sbjct: 344 tggtcgagattataggtctggttgtagagcatgttgcgctgttcttcgtacatgcgcttg 285 Query: 592 cgctgcttgaggatcctcatggcgcgggccttgacggcctcctgcgcggggcccggcctg 651 |||||||| | ||| |||||||||||||| | ||| ||||| | ||| || || | Sbjct: 284 ---tgcttgagaagcctgatggcgcgggccttaatggcgtcctgggagggtccagggcgt 228 Query: 652 gtcttcttgatctgctccttgta 674 |||||| |||||||||||||||| Sbjct: 227 gtcttcctgatctgctccttgta 205
>gb|BT019051.1| Zea mays clone Contig572.F mRNA sequence Length = 910 Score = 188 bits (95), Expect = 2e-44 Identities = 245/295 (83%) Strand = Plus / Minus Query: 274 tcaaagtccatatcggcttccaaagcatcaagctcgcccataagttcctcctcgtcgatg 333 ||||| |||||||| | ||||||||||| ||||||||||| ||||| |||||||| | | Sbjct: 619 tcaaattccatatcagactccaaagcatctagctcgcccatcagttcttcctcgtcaacg 560 Query: 334 tcatctgggacattgtagcttctaccaagagtttcttgtatttcattgctcacatccata 393 ||||| |||| ||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 559 tcatcagggatgttgtagcttctaccaagagtttcttgtatctcattgctcacgtccatc 500 Query: 394 agatccatcatctcgtcttgcatgctatctatatcttcaatcctgacagtcttcatcatc 453 ||||| |||| || |||||||| |||| || || ||||| ||||||| |||||||| Sbjct: 499 agatctgtcatttcatcttgcatattatcaatttcatcaattttgacagttttcatcatt 440 Query: 454 cctttcagctctttattggcagccttcattgcagtcatagtctgttgagcatctttaatt 513 || || ||||| || || || |||||||||||| |||||||||| |||||||| || | Sbjct: 439 cccttgagctccttgtttgctgccttcattgcattcatagtctgctgagcatccttgagg 380 Query: 514 ccctccgacgcaaaagcaacttggtcaagattataagtttggttgtacagcatgt 568 || || | ||||| |||||||||| ||||| || ||||||||||||| ||||| Sbjct: 379 ccatcggcagcaaagccaacttggtcgagattgtaggtttggttgtacaacatgt 325 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 192 acttggtgcagcaggtaagttaagctcagaatcaa 226 ||||||||||||||||||||| || |||| ||||| Sbjct: 695 acttggtgcagcaggtaagttgaggtcagcatcaa 661
>gb|AY109125.1| Zea mays PCO100749 mRNA sequence Length = 978 Score = 188 bits (95), Expect = 2e-44 Identities = 245/295 (83%) Strand = Plus / Minus Query: 274 tcaaagtccatatcggcttccaaagcatcaagctcgcccataagttcctcctcgtcgatg 333 ||||| |||||||| | ||||||||||| ||||||||||| ||||| |||||||| | | Sbjct: 638 tcaaattccatatcagactccaaagcatctagctcgcccatcagttcttcctcgtcaacg 579 Query: 334 tcatctgggacattgtagcttctaccaagagtttcttgtatttcattgctcacatccata 393 ||||| |||| ||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 578 tcatcagggatgttgtagcttctaccaagagtttcttgtatctcattgctcacgtccatc 519 Query: 394 agatccatcatctcgtcttgcatgctatctatatcttcaatcctgacagtcttcatcatc 453 ||||| |||| || |||||||| |||| || || ||||| ||||||| |||||||| Sbjct: 518 agatctgtcatttcatcttgcatattatcaatttcatcaattttgacagttttcatcatt 459 Query: 454 cctttcagctctttattggcagccttcattgcagtcatagtctgttgagcatctttaatt 513 || || ||||| || || || |||||||||||| |||||||||| |||||||| || | Sbjct: 458 cccttgagctccttgtttgctgccttcattgcattcatagtctgctgagcatccttgagg 399 Query: 514 ccctccgacgcaaaagcaacttggtcaagattataagtttggttgtacagcatgt 568 || || | ||||| |||||||||| ||||| || ||||||||||||| ||||| Sbjct: 398 ccatcggcagcaaagccaacttggtcgagattgtaggtttggttgtacaacatgt 344 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 192 acttggtgcagcaggtaagttaagctcagaatcaa 226 ||||||||||||||||||||| || |||| ||||| Sbjct: 714 acttggtgcagcaggtaagttgaggtcagcatcaa 680
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 163 bits (82), Expect = 9e-37 Identities = 100/106 (94%) Strand = Plus / Minus Query: 310 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 369 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 144784 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 144725 Query: 370 tgtatttcattgctcacatccataagatccatcatctcgtcttgca 415 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144724 tgtatttcattgctcacatccataagatccatcatctcgtcttgca 144679 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Minus Query: 194 ttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttggaggt 253 ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| |||| Sbjct: 145292 ttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttgaaggt 145233 Query: 254 acgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctc 308 |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 145232 acgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctc 145178 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 590 tgcgctgcttgaggatcctcatggcgcgggccttgacggcctcctgcgcggggcccggcc 649 ||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||| |||| Sbjct: 143588 tgcgctgcttgaggaccctcatggcgcgtgccttgatggcctcctgggcggggcctggcc 143529 Query: 650 tggtcttcttgatctgctccttgtagcg 677 |||||||||||||||| ||||||||||| Sbjct: 143528 tggtcttcttgatctggtccttgtagcg 143501 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 499 tgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataagtttggttg 558 ||||||||||||| |||||| || |||||||||||||||||||| ||||| ||||||||| Sbjct: 144364 tgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatatgtttggttg 144305 Query: 559 tacagcatgtcgcgctgtccttc 581 ||||||||||| ||||| ||||| Sbjct: 144304 tacagcatgtcacgctgcccttc 144282 Score = 103 bits (52), Expect = 8e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 420 atctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagcctt 479 |||||||||||||| | ||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 144537 atctatatcttcaagcttgacagttttcatcattcctttcagctctttattggctgcctt 144478 Query: 480 cattgcagtcat 491 |||||||||||| Sbjct: 144477 cattgcagtcat 144466
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 163 bits (82), Expect = 9e-37 Identities = 100/106 (94%) Strand = Plus / Minus Query: 310 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 369 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 26968 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 26909 Query: 370 tgtatttcattgctcacatccataagatccatcatctcgtcttgca 415 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26908 tgtatttcattgctcacatccataagatccatcatctcgtcttgca 26863 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Minus Query: 194 ttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttggaggt 253 ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| |||| Sbjct: 27476 ttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttgaaggt 27417 Query: 254 acgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctc 308 |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 27416 acgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctc 27362 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 590 tgcgctgcttgaggatcctcatggcgcgggccttgacggcctcctgcgcggggcccggcc 649 ||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||| |||| Sbjct: 25772 tgcgctgcttgaggaccctcatggcgcgtgccttgatggcctcctgggcggggcctggcc 25713 Query: 650 tggtcttcttgatctgctccttgtagcg 677 |||||||||||||||| ||||||||||| Sbjct: 25712 tggtcttcttgatctggtccttgtagcg 25685 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 499 tgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataagtttggttg 558 ||||||||||||| |||||| || |||||||||||||||||||| ||||| ||||||||| Sbjct: 26548 tgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatatgtttggttg 26489 Query: 559 tacagcatgtcgcgctgtccttc 581 ||||||||||| ||||| ||||| Sbjct: 26488 tacagcatgtcacgctgcccttc 26466 Score = 103 bits (52), Expect = 8e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 420 atctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagcctt 479 |||||||||||||| | ||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 26721 atctatatcttcaagcttgacagttttcatcattcctttcagctctttattggctgcctt 26662 Query: 480 cattgcagtcat 491 |||||||||||| Sbjct: 26661 cattgcagtcat 26650
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10, complete sequence Length = 156772 Score = 163 bits (82), Expect = 9e-37 Identities = 100/106 (94%) Strand = Plus / Minus Query: 310 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 369 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 144784 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 144725 Query: 370 tgtatttcattgctcacatccataagatccatcatctcgtcttgca 415 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144724 tgtatttcattgctcacatccataagatccatcatctcgtcttgca 144679 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Minus Query: 194 ttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttggaggt 253 ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| |||| Sbjct: 145292 ttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttgaaggt 145233 Query: 254 acgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctc 308 |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 145232 acgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctc 145178 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 590 tgcgctgcttgaggatcctcatggcgcgggccttgacggcctcctgcgcggggcccggcc 649 ||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||| |||| Sbjct: 143588 tgcgctgcttgaggaccctcatggcgcgtgccttgatggcctcctgggcggggcctggcc 143529 Query: 650 tggtcttcttgatctgctccttgtagcg 677 |||||||||||||||| ||||||||||| Sbjct: 143528 tggtcttcttgatctggtccttgtagcg 143501 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 499 tgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataagtttggttg 558 ||||||||||||| |||||| || |||||||||||||||||||| ||||| ||||||||| Sbjct: 144364 tgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatatgtttggttg 144305 Query: 559 tacagcatgtcgcgctgtccttc 581 ||||||||||| ||||| ||||| Sbjct: 144304 tacagcatgtcacgctgcccttc 144282 Score = 103 bits (52), Expect = 8e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 420 atctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagcctt 479 |||||||||||||| | ||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 144537 atctatatcttcaagcttgacagttttcatcattcctttcagctctttattggctgcctt 144478 Query: 480 cattgcagtcat 491 |||||||||||| Sbjct: 144477 cattgcagtcat 144466
>ref|NM_120567.1| Arabidopsis thaliana unknown protein AT5G04850 mRNA, complete cds Length = 978 Score = 139 bits (70), Expect = 1e-29 Identities = 238/294 (80%) Strand = Plus / Minus Query: 297 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 356 ||||||||||||||||| || || || ||||| |||||||| || ||||||||||| || Sbjct: 596 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 537 Query: 357 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 416 |||||| || ||||| |||||| ||| ||||||| | |||||||| || ||||||| Sbjct: 536 accaagtgtctcttgaatttcagaactctcatccattaagtccatcatatcatcttgcaa 477 Query: 417 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 476 |||||||||||| |||| |||| || |||||||| ||||||||||| || || |||| Sbjct: 476 attatctatatcttgaatcttgacggttttcatcattcctttcagctccttgttagcaga 417 Query: 477 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 536 || | || |||||||| |||||||||||||||| || || | ||||| | |||||| Sbjct: 416 ttttagcgctgtcatagtttgttgagcatctttaaggccttcagcagcaaatgaaacttg 357 Query: 537 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacatctt 590 ||||| ||| |||| || || || |||||||| || ||||||||||||||||| Sbjct: 356 atcaaggttaaaagtctgattatagagcatgtcacgttgtccttcatacatctt 303
>gb|AY142614.1| Arabidopsis thaliana unknown protein (At5g04850) mRNA, complete cds Length = 739 Score = 139 bits (70), Expect = 1e-29 Identities = 238/294 (80%) Strand = Plus / Minus Query: 297 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 356 ||||||||||||||||| || || || ||||| |||||||| || ||||||||||| || Sbjct: 510 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 451 Query: 357 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 416 |||||| || ||||| |||||| ||| ||||||| | |||||||| || ||||||| Sbjct: 450 accaagtgtctcttgaatttcagaactctcatccattaagtccatcatatcatcttgcaa 391 Query: 417 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 476 |||||||||||| |||| |||| || |||||||| ||||||||||| || || |||| Sbjct: 390 attatctatatcttgaatcttgacggttttcatcattcctttcagctccttgttagcaga 331 Query: 477 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 536 || | || |||||||| |||||||||||||||| || || | ||||| | |||||| Sbjct: 330 ttttagcgctgtcatagtttgttgagcatctttaaggccttcagcagcaaatgaaacttg 271 Query: 537 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacatctt 590 ||||| ||| |||| || || || |||||||| || ||||||||||||||||| Sbjct: 270 atcaaggttaaaagtctgattatagagcatgtcacgttgtccttcatacatctt 217
>gb|AF370241.1| Arabidopsis thaliana unknown protein (At5g04850) mRNA, complete cds Length = 963 Score = 139 bits (70), Expect = 1e-29 Identities = 238/294 (80%) Strand = Plus / Minus Query: 297 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 356 ||||||||||||||||| || || || ||||| |||||||| || ||||||||||| || Sbjct: 573 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 514 Query: 357 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 416 |||||| || ||||| |||||| ||| ||||||| | |||||||| || ||||||| Sbjct: 513 accaagtgtctcttgaatttcagaactctcatccattaagtccatcatatcatcttgcaa 454 Query: 417 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 476 |||||||||||| |||| |||| || |||||||| ||||||||||| || || |||| Sbjct: 453 attatctatatcttgaatcttgacggttttcatcattcctttcagctccttgttagcaga 394 Query: 477 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 536 || | || |||||||| |||||||||||||||| || || | ||||| | |||||| Sbjct: 393 ttttagcgctgtcatagtttgttgagcatctttaaggccttcagcagcaaatgaaacttg 334 Query: 537 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacatctt 590 ||||| ||| |||| || || || |||||||| || ||||||||||||||||| Sbjct: 333 atcaaggttaaaagtctgattatagagcatgtcacgttgtccttcatacatctt 280
>emb|BX832277.1|CNS0A11H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZF10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 922 Score = 139 bits (70), Expect = 1e-29 Identities = 238/294 (80%) Strand = Plus / Minus Query: 297 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 356 ||||||||||||||||| || || || ||||| |||||||| || ||||||||||| || Sbjct: 581 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 522 Query: 357 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 416 |||||| || ||||| |||||| ||| ||||||| | |||||||| || ||||||| Sbjct: 521 accaagtgtctcttgaatttcagaactctcatccattaagtccatcatatcatcttgcaa 462 Query: 417 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 476 |||||||||||| |||| |||| || |||||||| ||||||||||| || || |||| Sbjct: 461 attatctatatcttgaatcttgacggttttcatcattcctttcagctccttgttagcaga 402 Query: 477 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 536 || | || |||||||| |||||||||||||||| || || | ||||| | |||||| Sbjct: 401 ttttagcgctgtcatagtttgttgagcatctttaaggccttcagcagcaaatgaaacttg 342 Query: 537 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacatctt 590 ||||| ||| |||| || || || |||||||| || ||||||||||||||||| Sbjct: 341 atcaaggttaaaagtctgattatagagcatgtcacgttgtccttcatacatctt 288
>gb|AY088616.1| Arabidopsis thaliana clone 8440 mRNA, complete sequence Length = 978 Score = 139 bits (70), Expect = 1e-29 Identities = 238/294 (80%) Strand = Plus / Minus Query: 297 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 356 ||||||||||||||||| || || || ||||| |||||||| || ||||||||||| || Sbjct: 596 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 537 Query: 357 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 416 |||||| || ||||| |||||| ||| ||||||| | |||||||| || ||||||| Sbjct: 536 accaagtgtctcttgaatttcagaactctcatccattaagtccatcatatcatcttgcaa 477 Query: 417 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 476 |||||||||||| |||| |||| || |||||||| ||||||||||| || || |||| Sbjct: 476 attatctatatcttgaatcttgacggttttcatcattcctttcagctccttgttagcaga 417 Query: 477 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 536 || | || |||||||| |||||||||||||||| || || | ||||| | |||||| Sbjct: 416 ttttagcgctgtcatagtttgttgagcatctttaaggccttcagcagcaaatgaaacttg 357 Query: 537 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacatctt 590 ||||| ||| |||| || || || |||||||| || ||||||||||||||||| Sbjct: 356 atcaaggttaaaagtctgattatagagcatgtcacgttgtccttcatacatctt 303
>emb|BX832584.1|CNS0A12C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH82ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 131 bits (66), Expect = 3e-27 Identities = 237/294 (80%) Strand = Plus / Minus Query: 297 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 356 ||||||||||||||||| || || || ||||| |||||||| || ||||||||||| || Sbjct: 569 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 510 Query: 357 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 416 |||||| || ||||| |||||| ||| ||||||| | |||||||| || ||||||| Sbjct: 509 accaagtgtctcttgaatttcagaactctcatccattaagtccatcatatcatcttgcaa 450 Query: 417 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 476 |||||||||||| |||| |||| || |||||||| ||||||||||| || || || Sbjct: 449 attatctatatcttgaatcttgacggttttcatcattcctttcagctccttgttatcata 390 Query: 477 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 536 || | ||| |||||||| |||||||||||||||| || || | ||||| | |||||| Sbjct: 389 ttttagtgctgtcatagtttgttgagcatctttaaggccttcagcagcaaatgaaacttg 330 Query: 537 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacatctt 590 ||||| ||| |||| || || || |||||||| || ||||||||||||||||| Sbjct: 329 atcaaggttaaaagtctgattatagagcatgtcacgttgtccttcatacatctt 276
>ref|NM_111900.3| Arabidopsis thaliana unknown protein AT3G10640 transcript variant AT3G10640.1 mRNA, complete cds Length = 1013 Score = 117 bits (59), Expect = 5e-23 Identities = 233/291 (80%) Strand = Plus / Minus Query: 297 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 356 |||||||||||| ||||| || || |||||||| | | |||| || | ||||||||| || Sbjct: 624 agcatcaagctctcccatgaggtcatcctcgtcaaggccatcaggaatattgtagctcct 565 Query: 357 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 416 |||||| | |||||| |||||| || |||||||| |||||||||||||||||||| | Sbjct: 564 accaagtgattcttgaatttcagaactaacatccatcagatccatcatctcgtcttgtaa 505 Query: 417 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 476 |||| ||||||| |||| |||| || |||||||| ||||||| ||| || || |||| Sbjct: 504 attatcaatatcttgaatcttgacggttttcatcattcctttcaactccttgttcgcaga 445 Query: 477 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 536 || | ||| |||||||| |||||||||||||| | ||| || | || || | |||||| Sbjct: 444 ttttagtgctgtcatagtttgttgagcatctttgagtccttcagcggcgaatgaaacttg 385 Query: 537 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacat 587 || ||||| | || || || || ||||||||||| |||||||||||||| Sbjct: 384 atcgagattgaatgtctgattatagagcatgtcgcgttgtccttcatacat 334
>ref|NM_202544.1| Arabidopsis thaliana unknown protein AT3G10640 transcript variant AT3G10640.2 mRNA, complete cds Length = 1266 Score = 117 bits (59), Expect = 5e-23 Identities = 233/291 (80%) Strand = Plus / Minus Query: 297 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 356 |||||||||||| ||||| || || |||||||| | | |||| || | ||||||||| || Sbjct: 877 agcatcaagctctcccatgaggtcatcctcgtcaaggccatcaggaatattgtagctcct 818 Query: 357 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 416 |||||| | |||||| |||||| || |||||||| |||||||||||||||||||| | Sbjct: 817 accaagtgattcttgaatttcagaactaacatccatcagatccatcatctcgtcttgtaa 758 Query: 417 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 476 |||| ||||||| |||| |||| || |||||||| ||||||| ||| || || |||| Sbjct: 757 attatcaatatcttgaatcttgacggttttcatcattcctttcaactccttgttcgcaga 698 Query: 477 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 536 || | ||| |||||||| |||||||||||||| | ||| || | || || | |||||| Sbjct: 697 ttttagtgctgtcatagtttgttgagcatctttgagtccttcagcggcgaatgaaacttg 638 Query: 537 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacat 587 || ||||| | || || || || ||||||||||| |||||||||||||| Sbjct: 637 atcgagattgaatgtctgattatagagcatgtcgcgttgtccttcatacat 587
>gb|BT014454.1| Lycopersicon esculentum clone 133801F, mRNA sequence Length = 1008 Score = 117 bits (59), Expect = 5e-23 Identities = 251/315 (79%) Strand = Plus / Minus Query: 273 ttcaaagtccatatcggcttccaaagcatcaagctcgcccataagttcctcctcgtcgat 332 |||||| ||||| || ||||||| |||||||||||||||||| || || || || || | Sbjct: 633 ttcaaactccatgtccgcttccagagcatcaagctcgcccatgagctcttcttcatcaac 574 Query: 333 gtcatctgggacattgtagcttctaccaagagtttcttgtatttcattgctcacatccat 392 |||||| || ||| |||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 573 gtcatcaggcacaccgtagcttctaccaagagtctcttgaatttcattgcttacatccat 514 Query: 393 aagatccatcatctcgtcttgcatgctatctatatcttcaatcctgacagtcttcatcat 452 || || |||| || ||||| | | |||||| |||| ||| || ||||| |||||||| Sbjct: 513 caggtctgtcatttcatcttgtaggttatctacgtcttgaatgctcacagttttcatcat 454 Query: 453 ccctttcagctctttattggcagccttcattgcagtcatagtctgttgagcatctttaat 512 ||||| | ||||| || || | ||||||||| | ||| || || ||||||||||| || Sbjct: 453 tccttttaattctttgttcgctgacttcattgctgccattgtttgctgagcatctttgat 394 Query: 513 tccctccgacgcaaaagcaacttggtcaagattataagtttggttgtacagcatgtcgcg 572 ||||| | ||||| | |||||||| | || || || || ||||| |||||||| || Sbjct: 393 cccctcagcagcaaacgagacttggtctaagttgtatgtctgattgtagagcatgtctcg 334 Query: 573 ctgtccttcatacat 587 ||| ||||||||||| Sbjct: 333 ctgaccttcatacat 319
>emb|BX823662.1|CNS0A6IH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS63ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1206 Score = 117 bits (59), Expect = 5e-23 Identities = 233/291 (80%) Strand = Plus / Minus Query: 297 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 356 |||||||||||| ||||| || || |||||||| | | |||| || | ||||||||| || Sbjct: 876 agcatcaagctctcccatgaggtcatcctcgtcaaggccatcaggaatattgtagctcct 817 Query: 357 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 416 |||||| | |||||| |||||| || |||||||| |||||||||||||||||||| | Sbjct: 816 accaagtgattcttgaatttcagaactaacatccatcagatccatcatctcgtcttgtaa 757 Query: 417 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 476 |||| ||||||| |||| |||| || |||||||| ||||||| ||| || || |||| Sbjct: 756 attatcaatatcttgaatcttgacggttttcatcattcctttcaactccttgttcgcaga 697 Query: 477 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 536 || | ||| |||||||| |||||||||||||| | ||| || | || || | |||||| Sbjct: 696 ttttagtgctgtcatagtttgttgagcatctttgagtccttcagcggcgaatgaaacttg 637 Query: 537 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacat 587 || ||||| | || || || || ||||||||||| |||||||||||||| Sbjct: 636 atcgagattgaatgtctgattatagagcatgtcgcgttgtccttcatacat 586
>gb|BT005859.1| Arabidopsis thaliana At3g10640 gene, complete cds Length = 708 Score = 117 bits (59), Expect = 5e-23 Identities = 233/291 (80%) Strand = Plus / Minus Query: 297 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 356 |||||||||||| ||||| || || |||||||| | | |||| || | ||||||||| || Sbjct: 510 agcatcaagctctcccatgaggtcatcctcgtcaaggccatcaggaatattgtagctcct 451 Query: 357 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 416 |||||| | |||||| |||||| || |||||||| |||||||||||||||||||| | Sbjct: 450 accaagtgattcttgaatttcagaactaacatccatcagatccatcatctcgtcttgtaa 391 Query: 417 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 476 |||| ||||||| |||| |||| || |||||||| ||||||| ||| || || |||| Sbjct: 390 attatcaatatcttgaatcttgacggttttcatcattcctttcaactccttgttcgcaga 331 Query: 477 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 536 || | ||| |||||||| |||||||||||||| | ||| || | || || | |||||| Sbjct: 330 ttttagtgctgtcatagtttgttgagcatctttgagtccttcagcggcgaatgaaacttg 271 Query: 537 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacat 587 || ||||| | || || || || ||||||||||| |||||||||||||| Sbjct: 270 atcgagattgaatgtctgattatagagcatgtcgcgttgtccttcatacat 220
>gb|AF234647.1|AF234647 Triticum aestivum clone G1 gamma-gliadin gene, complete cds Length = 5718 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 495 ctgttgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataagtttg 554 |||||||||||||||||||| ||| | | ||||||||||||| |||| ||||||||| Sbjct: 217 ctgttgagcatctttaattcactctgttgtgtaagcaacttggtcgagataataagtttg 158 Query: 555 gttgtacagca 565 ||||||||||| Sbjct: 157 gttgtacagca 147
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 346 ttgtagcttctaccaagagtttcttgtatttcattgctcacatccat 392 ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 170802 ttgtagcttctaccaagggattcttgtatttcgttgctcacatccat 170848 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 235 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 294 |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || ||| Sbjct: 170482 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 170541 Query: 295 aaagcatc 302 |||||||| Sbjct: 170542 aaagcatc 170549 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 430 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 489 |||||| |||| ||||||||||| || || |||||||||||||| |||||||| ||| || Sbjct: 171408 tcaatcttgactgtcttcatcattcccttgagctctttattggcggccttcatggcattc 171467 Query: 490 at 491 || Sbjct: 171468 at 171469 Score = 48.1 bits (24), Expect = 0.038 Identities = 66/80 (82%) Strand = Plus / Plus Query: 595 tgcttgaggatcctcatggcgcgggccttgacggcctcctgcgcggggcccggcctggtc 654 |||||||| | ||| |||||||||||||| | ||| ||||| | ||| || || | ||| Sbjct: 171779 tgcttgagaagcctgatggcgcgggccttaatggcgtcctgggagggtccagggcgtgtc 171838 Query: 655 ttcttgatctgctccttgta 674 ||| |||||||||||||||| Sbjct: 171839 ttcctgatctgctccttgta 171858
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 346 ttgtagcttctaccaagagtttcttgtatttcattgctcacatccat 392 ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 168604 ttgtagcttctaccaagggattcttgtatttcgttgctcacatccat 168650 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 235 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 294 |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || ||| Sbjct: 168284 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 168343 Query: 295 aaagcatc 302 |||||||| Sbjct: 168344 aaagcatc 168351 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 430 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 489 |||||| |||| ||||||||||| || || |||||||||||||| |||||||| ||| || Sbjct: 169210 tcaatcttgactgtcttcatcattcccttgagctctttattggcggccttcatggcattc 169269 Query: 490 at 491 || Sbjct: 169270 at 169271 Score = 48.1 bits (24), Expect = 0.038 Identities = 66/80 (82%) Strand = Plus / Plus Query: 595 tgcttgaggatcctcatggcgcgggccttgacggcctcctgcgcggggcccggcctggtc 654 |||||||| | ||| |||||||||||||| | ||| ||||| | ||| || || | ||| Sbjct: 169581 tgcttgagaagcctgatggcgcgggccttaatggcgtcctgggagggtccagggcgtgtc 169640 Query: 655 ttcttgatctgctccttgta 674 ||| |||||||||||||||| Sbjct: 169641 ttcctgatctgctccttgta 169660
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 346 ttgtagcttctaccaagagtttcttgtatttcattgctcacatccat 392 ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 12472 ttgtagcttctaccaagggattcttgtatttcgttgctcacatccat 12518 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 235 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 294 |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || ||| Sbjct: 12152 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 12211 Query: 295 aaagcatc 302 |||||||| Sbjct: 12212 aaagcatc 12219 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 430 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 489 |||||| |||| ||||||||||| || || |||||||||||||| |||||||| ||| || Sbjct: 13078 tcaatcttgactgtcttcatcattcccttgagctctttattggcggccttcatggcattc 13137 Query: 490 at 491 || Sbjct: 13138 at 13139 Score = 48.1 bits (24), Expect = 0.038 Identities = 66/80 (82%) Strand = Plus / Plus Query: 595 tgcttgaggatcctcatggcgcgggccttgacggcctcctgcgcggggcccggcctggtc 654 |||||||| | ||| |||||||||||||| | ||| ||||| | ||| || || | ||| Sbjct: 13449 tgcttgagaagcctgatggcgcgggccttaatggcgtcctgggagggtccagggcgtgtc 13508 Query: 655 ttcttgatctgctccttgta 674 ||| |||||||||||||||| Sbjct: 13509 ttcctgatctgctccttgta 13528
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 346 ttgtagcttctaccaagagtttcttgtatttcattgctcacatccat 392 ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 119348 ttgtagcttctaccaagggattcttgtatttcgttgctcacatccat 119394 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 235 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 294 |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || ||| Sbjct: 119028 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 119087 Query: 295 aaagcatc 302 |||||||| Sbjct: 119088 aaagcatc 119095 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 430 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 489 |||||| |||| ||||||||||| || || |||||||||||||| |||||||| ||| || Sbjct: 119954 tcaatcttgactgtcttcatcattcccttgagctctttattggcggccttcatggcattc 120013 Query: 490 at 491 || Sbjct: 120014 at 120015 Score = 48.1 bits (24), Expect = 0.038 Identities = 66/80 (82%) Strand = Plus / Plus Query: 595 tgcttgaggatcctcatggcgcgggccttgacggcctcctgcgcggggcccggcctggtc 654 |||||||| | ||| |||||||||||||| | ||| ||||| | ||| || || | ||| Sbjct: 120325 tgcttgagaagcctgatggcgcgggccttaatggcgtcctgggagggtccagggcgtgtc 120384 Query: 655 ttcttgatctgctccttgta 674 ||| |||||||||||||||| Sbjct: 120385 ttcctgatctgctccttgta 120404
>gb|AC013428.6|ATAC013428 Arabidopsis thaliana chromosome III BAC F18K10 genomic sequence, complete sequence Length = 93985 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 345 attgtagcttctaccaagagtttcttgtatttcattgctcacatccataagatccatcat 404 ||||||||| |||||||| | |||||| |||||| || |||||||| ||||||||||| Sbjct: 81094 attgtagctcctaccaagtgattcttgaatttcagaactaacatccatcagatccatcat 81153 Query: 405 ctcgtcttg 413 ||||||||| Sbjct: 81154 ctcgtcttg 81162 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 562 agcatgtcgcgctgtccttcatac 585 ||||||||||| |||||||||||| Sbjct: 81489 agcatgtcgcgttgtccttcatac 81512
>gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13M14 genomic sequence, complete sequence Length = 118107 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 345 attgtagcttctaccaagagtttcttgtatttcattgctcacatccataagatccatcat 404 ||||||||| |||||||| | |||||| |||||| || |||||||| ||||||||||| Sbjct: 23423 attgtagctcctaccaagtgattcttgaatttcagaactaacatccatcagatccatcat 23364 Query: 405 ctcgtcttg 413 ||||||||| Sbjct: 23363 ctcgtcttg 23355 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 562 agcatgtcgcgctgtccttcatac 585 ||||||||||| |||||||||||| Sbjct: 23028 agcatgtcgcgttgtccttcatac 23005
>gb|AF280605.1| Triticum aestivum omega gliadin storage protein gene, complete cds Length = 3789 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 420 atctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagcctt 479 |||||||||||||||||||||||| || ||||||| ||| |||||||||||| ||||| Sbjct: 1689 atctatatcttcaatcctgacagtttttctcatccccatcaactctttattggctgcctt 1630
>dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUK11 Length = 79073 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 325 tcgtcgatgtcatctgggacattgtagcttctaccaagagtttcttgtatttcattgctc 384 ||||| |||||||| || ||||||||||| |||||||| || ||||| |||||| ||| Sbjct: 56364 tcgtcaatgtcatcaggaacattgtagctcctaccaagtgtctcttgaatttcagaactc 56423 Query: 385 acatccataagatccatcatctcgtcttgca 415 ||||||| | |||||||| || ||||||| Sbjct: 56424 tcatccattaagtccatcatatcatcttgca 56454 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 420 atctatatcttcaatcctgacagtcttcatcatccctttcagctc 464 ||||||||||| |||| |||| || |||||||| ||||||||||| Sbjct: 56546 atctatatcttgaatcttgacggttttcatcattcctttcagctc 56590 Score = 44.1 bits (22), Expect = 0.60 Identities = 73/90 (81%) Strand = Plus / Plus Query: 496 tgttgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataagtttgg 555 |||||||||||||||| || || | ||||| | |||||| ||||| ||| |||| || Sbjct: 56707 tgttgagcatctttaaggccttcagcagcaaatgaaacttgatcaaggttaaaagtctga 56766 Query: 556 ttgtacagcatgtcgcgctgtccttcatac 585 || || |||||||| || |||||||||||| Sbjct: 56767 ttatagagcatgtcacgttgtccttcatac 56796
>gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete sequence Length = 105215 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 367 tcttgtatttcattgctcacatccataagatccatcatctc 407 ||||| |||| ||||||||||| ||| |||||||||||||| Sbjct: 103091 tcttgaattttattgctcacattcatgagatccatcatctc 103051
>gb|AF280606.1| Triticum aestivum omega gliadin pseudogene, complete sequence Length = 3925 Score = 48.1 bits (24), Expect = 0.038 Identities = 60/72 (83%) Strand = Plus / Minus Query: 420 atctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagcctt 479 |||||||||||||||| ||| ||| || |||||| | ||| |||||||||||| || || Sbjct: 1702 atctatatcttcaatcttgatagtttttctcatccttatcaactctttattggctgcttt 1643 Query: 480 cattgcagtcat 491 |||| |||||| Sbjct: 1642 tattgtagtcat 1631
>dbj|AK068676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158I15, full insert sequence Length = 845 Score = 48.1 bits (24), Expect = 0.038 Identities = 66/80 (82%) Strand = Plus / Plus Query: 595 tgcttgaggatcctcatggcgcgggccttgacggcctcctgcgcggggcccggcctggtc 654 |||||||| | ||| |||||||||||||| | ||| ||||| | ||| || || | ||| Sbjct: 191 tgcttgagaagcctgatggcgcgggccttaatggcgtcctgggagggtccagggcgtgtc 250 Query: 655 ttcttgatctgctccttgta 674 ||| |||||||||||||||| Sbjct: 251 ttcctgatctgctccttgta 270
>dbj|AK066123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055A22, full insert sequence Length = 2498 Score = 48.1 bits (24), Expect = 0.038 Identities = 66/80 (82%) Strand = Plus / Plus Query: 595 tgcttgaggatcctcatggcgcgggccttgacggcctcctgcgcggggcccggcctggtc 654 |||||||| | ||| |||||||||||||| | ||| ||||| | ||| || || | ||| Sbjct: 195 tgcttgagaagcctgatggcgcgggccttaatggcgtcctgggagggtccagggcgtgtc 254 Query: 655 ttcttgatctgctccttgta 674 ||| |||||||||||||||| Sbjct: 255 ttcctgatctgctccttgta 274
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 617 gggccttgacggcctcctgcgc 638 |||||||||||||||||||||| Sbjct: 421127 gggccttgacggcctcctgcgc 421148
>gb|AC164086.3| Mus musculus BAC clone RP23-25E6 from chromosome 13, complete sequence Length = 214085 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 gaggcagatacaatgaatttgt 40 |||||||||||||||||||||| Sbjct: 76110 gaggcagatacaatgaatttgt 76089
>ref|NM_001010973.1| Mus musculus histamine receptor H 2 (Hrh2), transcript variant 1, mRNA Length = 2789 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 gaggcagatacaatgaatttgt 40 |||||||||||||||||||||| Sbjct: 1804 gaggcagatacaatgaatttgt 1825
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 614 cgcgggccttgacggcctcctgcgcg 639 ||||||||||||| |||||||||||| Sbjct: 573588 cgcgggccttgaccgcctcctgcgcg 573563
>dbj|AK163760.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030041E02 product:histamine receptor H 2, full insert sequence Length = 2781 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 gaggcagatacaatgaatttgt 40 |||||||||||||||||||||| Sbjct: 1801 gaggcagatacaatgaatttgt 1822
>dbj|AK020259.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130001K16 product:HISTAMINE RECEPTOR H 2, full insert sequence Length = 2790 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 gaggcagatacaatgaatttgt 40 |||||||||||||||||||||| Sbjct: 1805 gaggcagatacaatgaatttgt 1826
>gb|AF273679.1|AF273679 Rhizobium etli plasmid pCFN42f FixNf (fixNf), FixKf (fixKf), and FixL (fixL) genes, complete cds Length = 4869 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 614 cgcgggccttgacggcctcctgcgcg 639 ||||||||||||| |||||||||||| Sbjct: 3035 cgcgggccttgaccgcctcctgcgcg 3010
>emb|AL772177.2| Human DNA sequence from clone RP11-353A5 on chromosome 1, complete sequence Length = 7826 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 gctgcttgaggatcctcatgg 613 ||||||||||||||||||||| Sbjct: 2623 gctgcttgaggatcctcatgg 2643
>emb|AL353729.17| Human DNA sequence from clone RP11-290L7 on chromosome 9 Contains the 3' end of the CNTNAP3 gene for contactin associated protein-like 3, a TGF beta-inducible nuclear protein 1 (TINP1) pseudogene and a RNA binding motif protein 17 (RBM17) pseudogene, complete sequence Length = 195668 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 tcatctcgtcttgcatgctatctat 425 |||||| |||||||||||||||||| Sbjct: 50259 tcatctggtcttgcatgctatctat 50235
>ref|XM_690626.1| PREDICTED: Danio rerio similar to immunoglobulin superfamily, member 9 (LOC567334), mRNA Length = 3618 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 gactgctgcatgaccacttggtgca 201 |||||||||||||||||||| |||| Sbjct: 2708 gactgctgcatgaccacttgctgca 2684
>gb|AC101727.8| Mus musculus chromosome 1, clone RP23-327G3, complete sequence Length = 196065 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ttcattgcagtcatagtctg 497 |||||||||||||||||||| Sbjct: 2826 ttcattgcagtcatagtctg 2845
>ref|XM_364506.1| Magnaporthe grisea 70-15 predicted protein (MG09420.4) partial mRNA Length = 903 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 accaagagtttcttgtattt 376 |||||||||||||||||||| Sbjct: 262 accaagagtttcttgtattt 243
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tgctatctatatcttcaatc 435 |||||||||||||||||||| Sbjct: 29155 tgctatctatatcttcaatc 29174
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tgctatctatatcttcaatc 435 |||||||||||||||||||| Sbjct: 22433908 tgctatctatatcttcaatc 22433927
>ref|XM_747329.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g10560) partial mRNA Length = 1389 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tcagaatcaagatcagtctc 236 |||||||||||||||||||| Sbjct: 487 tcagaatcaagatcagtctc 468
>gb|AC112154.4| Mus musculus BAC clone RP24-98L2 from chromosome 1, complete sequence Length = 200202 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ttcattgcagtcatagtctg 497 |||||||||||||||||||| Sbjct: 44934 ttcattgcagtcatagtctg 44953
>gb|AC091623.2| Sus scrofa clone RP44-183E24, complete sequence Length = 200062 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 gatcaaacctacaccatagc 94 |||||||||||||||||||| Sbjct: 34462 gatcaaacctacaccatagc 34443
>gb|DQ153192.1| Sus scrofa CKM gene, promoter region and complete cds Length = 12338 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 catttcatcctcctgctgcc 166 |||||||||||||||||||| Sbjct: 3018 catttcatcctcctgctgcc 3037
>emb|CR788268.5| Human DNA sequence from clone RP11-24B13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to contactin associated protein-like 3 (CNTNAP3) and an RNA binding motif protein 17 (RBM17) pseudogene, complete sequence Length = 164026 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 tcatctcgtcttgcatgctatcta 424 |||||| ||||||||||||||||| Sbjct: 74219 tcatctggtcttgcatgctatcta 74196
>emb|BX005040.12| Human DNA sequence from clone RP11-101E5 on chromosome 9 Contains two novel genes, a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), a 6-pyruvoyltetrahydropterin synthase (PTS) pseudogene, the 5' end of a pseudogene similar to part of contactin associated protein-like family, a novel pseudogene and a CpG island, complete sequence Length = 171762 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 tcatctcgtcttgcatgctatcta 424 |||||| ||||||||||||||||| Sbjct: 130655 tcatctggtcttgcatgctatcta 130632
>emb|BX005195.5| Human DNA sequence from clone RP11-203I2 on chromosome 9 Contains the 3' end of a pseudogene similar to part of contactin associated protein-like family and a pseudogene similar to part of a vomeronasal receptor, complete sequence Length = 174843 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 tcatctcgtcttgcatgctatcta 424 |||||| ||||||||||||||||| Sbjct: 14260 tcatctggtcttgcatgctatcta 14237
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tttcatcctcctgctgccgg 168 |||||||||||||||||||| Sbjct: 18006 tttcatcctcctgctgccgg 17987
>emb|CR792458.6| Zebrafish DNA sequence from clone RP71-47I2, complete sequence Length = 186632 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 617 gggccttgacggcctcctgc 636 |||||||||||||||||||| Sbjct: 136134 gggccttgacggcctcctgc 136153
>emb|CR555305.5| Mouse DNA sequence from clone CH25-525H24 on chromosome 11, complete sequence Length = 121111 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 gccttcattgcagtcatagtctgt 498 ||||||||||||||||||| |||| Sbjct: 48187 gccttcattgcagtcataggctgt 48164
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tgctatctatatcttcaatc 435 |||||||||||||||||||| Sbjct: 22426937 tgctatctatatcttcaatc 22426956
>gb|AC090983.13| Homo sapiens chromosome 15, clone RP11-385H1, complete sequence Length = 203244 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 gatgtcatctgggacattgt 349 |||||||||||||||||||| Sbjct: 136131 gatgtcatctgggacattgt 136150
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 actgctgcatgaccacttggtgca 201 |||||||||||||| ||||||||| Sbjct: 2675456 actgctgcatgaccccttggtgca 2675479
>gb|AC175052.2| Mus musculus chromosome 19, clone wi1-2093M24, complete sequence Length = 37627 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 gccttcattgcagtcatagtctgt 498 ||||||||||||||||||| |||| Sbjct: 7886 gccttcattgcagtcataggctgt 7909
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 654 cttcttgatctgctccttgt 673 |||||||||||||||||||| Sbjct: 905601 cttcttgatctgctccttgt 905582
>gb|AC159826.1| Gallus gallus BAC clone CH261-57J20 from chromosome unknown, complete sequence Length = 207137 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 634 tgcgcggggcccggcctggt 653 |||||||||||||||||||| Sbjct: 42903 tgcgcggggcccggcctggt 42884
>gb|AF000227.1|SCAF000227 Secale cereale omega secalin gene, complete cds Length = 9248 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 392 taagatccatcatctcgtcttgcatgct 419 |||||| |||||||| |||||||||||| Sbjct: 2146 taagatacatcatcttgtcttgcatgct 2119
>gb|M24219.1|HSERPT Rabbit gammaherpesvirus gene repeat motifs, complete cds Length = 925 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ggttcgccgggactgctgca 186 |||||||||||||||||||| Sbjct: 675 ggttcgccgggactgctgca 694
>gb|U08008.1|MEU08008 Metapenaeus ensis tropomyosin mRNA, partial cds Length = 843 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 656 tcttgatctgctccttgtag 675 |||||||||||||||||||| Sbjct: 670 tcttgatctgctccttgtag 651
>emb|AL714012.19| Mouse DNA sequence from clone RP23-238N3 on chromosome X, complete sequence Length = 120361 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cagtcccatttcatcctcct 160 |||||||||||||||||||| Sbjct: 44067 cagtcccatttcatcctcct 44048 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,637,521 Number of Sequences: 3902068 Number of extensions: 5637521 Number of successful extensions: 111702 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 111266 Number of HSP's gapped (non-prelim): 415 length of query: 685 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 662 effective length of database: 17,143,297,704 effective search space: 11348863080048 effective search space used: 11348863080048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
