ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19a21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192581.1| Oryza sativa (japonica cultivar-group), predic... 276 8e-71
2dbj|AK066167.1| Oryza sativa (japonica cultivar-group) cDNA clon... 276 8e-71
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
4dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
5gb|AY111532.1| Zea mays CL3286_1 mRNA sequence 98 4e-17
6ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8... 44 0.53
7gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, comple... 44 0.53
8emb|AL356738.14| Human DNA sequence from clone RP13-228J13 on ch... 44 0.53
9gb|AC142229.2| Homo sapiens fosmid clone XXFOS-800764H6 from 7, ... 44 0.53
10dbj|AK126310.1| Homo sapiens cDNA FLJ44331 fis, clone TRACH3003586 44 0.53
11gb|AC163757.5| Pan troglodytes BAC clone CH251-272C9 from chromo... 44 0.53
12gb|AC159036.3| Pan troglodytes BAC clone CH251-318E5 from chromo... 44 0.53
13gb|BC060938.1| Danio rerio Kallmann syndrome 1a sequence, mRNA (... 42 2.1
14dbj|AB206966.1| Mougeotia scalaris NEO1 gene for neochrome, comp... 42 2.1
15dbj|AK129588.1| Homo sapiens cDNA FLJ26077 fis, clone RCT02544 42 2.1
16gb|AF163310.1|AF163310 Danio rerio Kal1.1 mRNA, complete cds 42 2.1
17dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.1
18ref|NM_131358.1| Danio rerio Kallmann syndrome 1a sequence (kal1... 42 2.1
19gb|AC101889.6| Mus musculus chromosome 3, clone RP23-465M13, com... 40 8.3
20gb|AC112496.2| Homo sapiens X BAC RP11-242C19 (Roswell Park Canc... 40 8.3
21gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome... 40 8.3
22gb|AC108359.4| Homo sapiens chromosome X clone RP11-467P22, comp... 40 8.3
23gb|AF294635.1|AF294635 Ficedula hypoleuca chromosome Z chromo-he... 40 8.3
24gb|AF294634.1|AF294634 Ficedula albicollis chromosome Z chromo-h... 40 8.3
25gb|AC010740.7| Homo sapiens BAC clone RP11-493I5 from 2, complet... 40 8.3
26gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 8.3
27emb|AJ869829.1| Ficedula hypoleuca partial chdz gene for chromo-... 40 8.3
28emb|AJ869828.1| Ficedula hypoleuca partial chdz gene for chromo-... 40 8.3
29emb|AJ869827.1| Ficedula hypoleuca partial chdz gene for chromo-... 40 8.3
30emb|AJ869826.1| Ficedula hypoleuca partial chdz gene for chromo-... 40 8.3
31emb|AJ869825.1| Ficedula hypoleuca partial chdz gene for chromo-... 40 8.3
32emb|AJ869823.1| Ficedula hypoleuca partial chdz gene for chromo-... 40 8.3
33emb|AJ869822.1| Ficedula hypoleuca partial chdz gene for chromo-... 40 8.3
34emb|AJ869821.1| Ficedula hypoleuca partial chdz gene for chromo-... 40 8.3
35emb|AJ869819.1| Ficedula albicollis partial chdz gene for chromo... 40 8.3
36emb|AJ869818.1| Ficedula albicollis partial chdz gene for chromo... 40 8.3
37emb|AJ869817.1| Ficedula albicollis partial chdz gene for chromo... 40 8.3
38emb|AJ869816.1| Ficedula albicollis partial chdz gene for chromo... 40 8.3
39emb|AJ869815.1| Ficedula albicollis partial chdz gene for chromo... 40 8.3
40emb|AJ869814.1| Ficedula albicollis partial chdz gene for chromo... 40 8.3
41emb|AJ869813.1| Ficedula albicollis partial chdz gene for chromo... 40 8.3
42emb|AJ869812.1| Ficedula albicollis partial chdz gene for chromo... 40 8.3
43emb|AJ869811.1| Ficedula albicollis partial chdz gene for chromo... 40 8.3 
>ref|NM_192581.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score =  276 bits (139), Expect = 8e-71
 Identities = 223/251 (88%)
 Strand = Plus / Minus

                                                                        
Query: 351  aatggatggtctagagcttcttgggcagtaaggcgctctgaaggctcaaactttaaaaga 410
            |||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| 
Sbjct: 1274 aatggatggtctagagcttcttgggcagtaagacgctctgatggctcaaattttaaaagc 1215

                                                                        
Query: 411  ccatatagcaagtccgccagcgatgcctttgaatagtcagcatttctcgcaaccaagtcc 470
            ||||||| |||||| ||||||   ||| ||||||  ||||| || ||||| || ||||||
Sbjct: 1214 ccatataacaagtctgccagcaccgcccttgaatgatcagccttcctcgccactaagtcc 1155

                                                                        
Query: 471  tttagccggtgtagttttctgactgctctgatactttctcttgtaacagcaccttcaggc 530
            |||||||| | ||||||| |||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 1154 tttagccgatctagttttttgactgctctgatactctctcttgaaacagcaccttcaggc 1095

                                                                        
Query: 531  caatttagacgtgcccctcgcctaaaatatttctgagctgatgaactagccttccgtatc 590
            ||||||||||| || ||||| |||||||||||||||||||||||||| || |||| ||||
Sbjct: 1094 caatttagacgcgctcctcgtctaaaatatttctgagctgatgaactggctttccttatc 1035

                       
Query: 591  atgtgctctgg 601
            ||||| |||||
Sbjct: 1034 atgtgttctgg 1024
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>dbj|AK066167.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054D23, full
            insert sequence
          Length = 1570

 Score =  276 bits (139), Expect = 8e-71
 Identities = 223/251 (88%)
 Strand = Plus / Minus

                                                                        
Query: 351  aatggatggtctagagcttcttgggcagtaaggcgctctgaaggctcaaactttaaaaga 410
            |||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| 
Sbjct: 1216 aatggatggtctagagcttcttgggcagtaagacgctctgatggctcaaattttaaaagc 1157

                                                                        
Query: 411  ccatatagcaagtccgccagcgatgcctttgaatagtcagcatttctcgcaaccaagtcc 470
            ||||||| |||||| ||||||   ||| ||||||  ||||| || ||||| || ||||||
Sbjct: 1156 ccatataacaagtctgccagcaccgcccttgaatgatcagccttcctcgccactaagtcc 1097

                                                                        
Query: 471  tttagccggtgtagttttctgactgctctgatactttctcttgtaacagcaccttcaggc 530
            |||||||| | ||||||| |||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 1096 tttagccgatctagttttttgactgctctgatactctctcttgaaacagcaccttcaggc 1037

                                                                        
Query: 531  caatttagacgtgcccctcgcctaaaatatttctgagctgatgaactagccttccgtatc 590
            ||||||||||| || ||||| |||||||||||||||||||||||||| || |||| ||||
Sbjct: 1036 caatttagacgcgctcctcgtctaaaatatttctgagctgatgaactggctttccttatc 977

                       
Query: 591  atgtgctctgg 601
            ||||| |||||
Sbjct: 976  atgtgttctgg 966
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  153 bits (77), Expect = 8e-34
 Identities = 101/109 (92%)
 Strand = Plus / Minus

                                                                            
Query: 469      cctttagccggtgtagttttctgactgctctgatactttctcttgtaacagcaccttcag 528
                |||||||||| | ||||||| |||||||||||||||| ||||||| ||||||||||||||
Sbjct: 23090262 cctttagccgatctagttttttgactgctctgatactctctcttgaaacagcaccttcag 23090203

                                                                 
Query: 529      gccaatttagacgtgcccctcgcctaaaatatttctgagctgatgaact 577
                ||||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 23090202 gccaatttagacgcgctcctcgtctaaaatatttctgagctgatgaact 23090154



 Score =  113 bits (57), Expect = 7e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                            
Query: 351      aatggatggtctagagcttcttgggcagtaaggcgctctgaaggctcaaactttaaaaga 410
                |||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| 
Sbjct: 23090918 aatggatggtctagagcttcttgggcagtaagacgctctgatggctcaaattttaaaagc 23090859

                                     
Query: 411      ccatatagcaagtccgccagc 431
                ||||||| |||||| ||||||
Sbjct: 23090858 ccatataacaagtctgccagc 23090838
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>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0710A02
          Length = 157201

 Score =  153 bits (77), Expect = 8e-34
 Identities = 101/109 (92%)
 Strand = Plus / Minus

                                                                         
Query: 469   cctttagccggtgtagttttctgactgctctgatactttctcttgtaacagcaccttcag 528
             |||||||||| | ||||||| |||||||||||||||| ||||||| ||||||||||||||
Sbjct: 22421 cctttagccgatctagttttttgactgctctgatactctctcttgaaacagcaccttcag 22362

                                                              
Query: 529   gccaatttagacgtgcccctcgcctaaaatatttctgagctgatgaact 577
             ||||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 22361 gccaatttagacgcgctcctcgtctaaaatatttctgagctgatgaact 22313



 Score =  113 bits (57), Expect = 7e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                         
Query: 351   aatggatggtctagagcttcttgggcagtaaggcgctctgaaggctcaaactttaaaaga 410
             |||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| 
Sbjct: 23077 aatggatggtctagagcttcttgggcagtaagacgctctgatggctcaaattttaaaagc 23018

                                  
Query: 411   ccatatagcaagtccgccagc 431
             ||||||| |||||| ||||||
Sbjct: 23017 ccatataacaagtctgccagc 22997
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>gb|AY111532.1| Zea mays CL3286_1 mRNA sequence
          Length = 628

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 203/256 (79%)
 Strand = Plus / Plus

                                                                       
Query: 348 aagaatggatggtctagagcttcttgggcagtaaggcgctctgaaggctcaaactttaaa 407
           |||||||||||||| ||||||||||| || || || || ||||| ||||| |||   |  
Sbjct: 349 aagaatggatggtccagagcttcttgcgctgtcagacgttctgatggctcgaaccggagg 408

                                                                       
Query: 408 agaccatatagcaagtccgccagcgatgcctttgaatagtcagcatttctcgcaaccaag 467
           | ||  ||||||||||| ||||||  |||||| |||| | |||| || ||||  ||||||
Sbjct: 409 acactgtatagcaagtctgccagctctgccttcgaatggccagcgttcctcgataccaag 468

                                                                       
Query: 468 tcctttagccggtgtagttttctgactgctctgatactttctcttgtaacagcaccttca 527
           |||||||| || |  |||||  | || |||||||| |||||||||| |||||||||||||
Sbjct: 469 tcctttagtcgatccagtttcttcacagctctgatgctttctcttgaaacagcaccttca 528

                                                                       
Query: 528 ggccaatttagacgtgcccctcgcctaaaatatttctgagctgatgaactagccttccgt 587
           |||||||||| |||||   | | |||      ||||||||| || ||||| || ||||||
Sbjct: 529 ggccaatttaaacgtgttgccctcctgnnnnntttctgagcagaagaacttgctttccgt 588

                           
Query: 588 atcatgtgctctggta 603
           ||||| ||||||||||
Sbjct: 589 atcatatgctctggta 604
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>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X
          Length = 652898

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 397    caaactttaaaagaccatatag 418
              ||||||||||||||||||||||
Sbjct: 441098 caaactttaaaagaccatatag 441077
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>gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, complete sequence
          Length = 214229

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 267    ccgctgcttctccaggccttgttctt 292
              ||||||||||||| ||||||||||||
Sbjct: 207809 ccgctgcttctcctggccttgttctt 207784
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>emb|AL356738.14| Human DNA sequence from clone RP13-228J13 on chromosome X Contains a
             pseudogene similar to part of trimethyllysine hydroxylase,
             epsilon (TMLHE), two novel genes, the CLIC2 gene for
             chloride intracellular channel 2, a pseudogene similar to
             part of steroid-5-alpha-reductase alpha polypeptide 2
             (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
             (SRD5A2), a PHD finger protein pseudogene, a PTK9 protein
             tyrosine kinase 9 pseudogene (PTK9), the RAB39B gene for
             RAB39B member RAS oncogene family, the VBP1 gene for von
             Hippel-Lindau binding protein 1, a pseudogene similar to
             part of CD84 antigen (leukocyte antigen) (CD84) and three
             CpG islands, complete sequence
          Length = 174693

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 397   caaactttaaaagaccatatag 418
             ||||||||||||||||||||||
Sbjct: 86120 caaactttaaaagaccatatag 86141
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>gb|AC142229.2| Homo sapiens fosmid clone XXFOS-800764H6 from 7, complete sequence
          Length = 38724

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 267  ccgctgcttctccaggccttgttctt 292
            ||||||||||||| ||||||||||||
Sbjct: 5351 ccgctgcttctcctggccttgttctt 5326
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>dbj|AK126310.1| Homo sapiens cDNA FLJ44331 fis, clone TRACH3003586
          Length = 3600

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 267 ccgctgcttctccaggccttgttctt 292
           ||||||||||||| ||||||||||||
Sbjct: 867 ccgctgcttctcctggccttgttctt 842
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>gb|AC163757.5| Pan troglodytes BAC clone CH251-272C9 from chromosome unknown, complete
             sequence
          Length = 169213

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 397   caaactttaaaagaccatatag 418
             ||||||||||||||||||||||
Sbjct: 80445 caaactttaaaagaccatatag 80424
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>gb|AC159036.3| Pan troglodytes BAC clone CH251-318E5 from chromosome unknown, complete
              sequence
          Length = 156920

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 397    caaactttaaaagaccatatag 418
              ||||||||||||||||||||||
Sbjct: 137276 caaactttaaaagaccatatag 137297
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>gb|BC060938.1| Danio rerio Kallmann syndrome 1a sequence, mRNA (cDNA clone MGC:73357
            IMAGE:4144071), complete cds
          Length = 2386

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 50   attacaaacccaggattaaga 70
            |||||||||||||||||||||
Sbjct: 1955 attacaaacccaggattaaga 1975
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>dbj|AB206966.1| Mougeotia scalaris NEO1 gene for neochrome, complete cds
          Length = 6630

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 9    ctgctgccttgccttgccttg 29
            |||||||||||||||||||||
Sbjct: 3886 ctgctgccttgccttgccttg 3906
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>dbj|AK129588.1| Homo sapiens cDNA FLJ26077 fis, clone RCT02544
          Length = 1946

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 9   ctgctgccttgccttgccttg 29
           |||||||||||||||||||||
Sbjct: 835 ctgctgccttgccttgccttg 855
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>gb|AF163310.1|AF163310 Danio rerio Kal1.1 mRNA, complete cds
          Length = 2383

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 50   attacaaacccaggattaaga 70
            |||||||||||||||||||||
Sbjct: 1951 attacaaacccaggattaaga 1971
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>dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-689N19, complete
             sequence
          Length = 194140

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     ctgctgccttgccttgccttg 29
             |||||||||||||||||||||
Sbjct: 90401 ctgctgccttgccttgccttg 90421
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>ref|NM_131358.1| Danio rerio Kallmann syndrome 1a sequence (kal1a), mRNA
          Length = 2383

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 50   attacaaacccaggattaaga 70
            |||||||||||||||||||||
Sbjct: 1951 attacaaacccaggattaaga 1971
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>gb|AC101889.6| Mus musculus chromosome 3, clone RP23-465M13, complete sequence
          Length = 186900

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      ctgctgccttgccttgcctt 28
              ||||||||||||||||||||
Sbjct: 126381 ctgctgccttgccttgcctt 126362
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>gb|AC112496.2| Homo sapiens X BAC RP11-242C19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166765

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 2     gcctttactgctgccttgccttgccttg 29
             ||||| ||| ||||||||||||||||||
Sbjct: 52575 gccttgacttctgccttgccttgccttg 52548
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>gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome 13, complete sequence
          Length = 193176

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     tgctgccttgccttgccttg 29
              ||||||||||||||||||||
Sbjct: 128174 tgctgccttgccttgccttg 128193
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>gb|AC108359.4| Homo sapiens chromosome X clone RP11-467P22, complete sequence
          Length = 189224

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 2      gcctttactgctgccttgccttgccttg 29
              ||||| ||| ||||||||||||||||||
Sbjct: 142190 gccttgacttctgccttgccttgccttg 142163
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>gb|AF294635.1|AF294635 Ficedula hypoleuca chromosome Z chromo-helicase-DNA binding protein
           (CHD1Z) gene, intron a
          Length = 482

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 430 atcaaagcaacttccaattgtcat 407
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>gb|AF294634.1|AF294634 Ficedula albicollis chromosome Z chromo-helicase-DNA binding
           protein (CHD1Z) gene, intron a
          Length = 482

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 430 atcaaagcaacttccaattgtcat 407
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>gb|AC010740.7| Homo sapiens BAC clone RP11-493I5 from 2, complete sequence
          Length = 184455

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 432   gatgcctttgaatagtcagcattt 455
             |||||||||||||||||| |||||
Sbjct: 97890 gatgcctttgaatagtcaacattt 97913
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 394     gctcaaactttaaaagacca 413
               ||||||||||||||||||||
Sbjct: 1585457 gctcaaactttaaaagacca 1585476
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>emb|AJ869829.1| Ficedula hypoleuca partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate SP24
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869828.1| Ficedula hypoleuca partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate SP23
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869827.1| Ficedula hypoleuca partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate SP21
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869826.1| Ficedula hypoleuca partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate SP19
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869825.1| Ficedula hypoleuca partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate SP11
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869823.1| Ficedula hypoleuca partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate SP8
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869822.1| Ficedula hypoleuca partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate SP6
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869821.1| Ficedula hypoleuca partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate SP4
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869819.1| Ficedula albicollis partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate IC10
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869818.1| Ficedula albicollis partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate IC9
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869817.1| Ficedula albicollis partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate IC8
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869816.1| Ficedula albicollis partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate IC7
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869815.1| Ficedula albicollis partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate IC6
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869814.1| Ficedula albicollis partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate IC5
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869813.1| Ficedula albicollis partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate IC4
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869812.1| Ficedula albicollis partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate IC3
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447
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>emb|AJ869811.1| Ficedula albicollis partial chdz gene for
           chromo-helicase-DNA-binding on the Z chromosome, exon
           15, isolate IC2
          Length = 501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 atcaaagcatcttccaattgtcat 329
           ||||||||| ||||||||||||||
Sbjct: 470 atcaaagcaacttccaattgtcat 447


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,985,242
Number of Sequences: 3902068
Number of extensions: 4985242
Number of successful extensions: 87880
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87127
Number of HSP's gapped (non-prelim): 752
length of query: 608
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 585
effective length of database: 17,143,297,704
effective search space: 10028829156840
effective search space used: 10028829156840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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