>gb|AY483152.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA2)
            mRNA, complete cds
          Length = 3907

 Score =  190 bits (96), Expect = 7e-46
 Identities = 129/138 (93%), Gaps = 2/138 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    cgaactgcacagtaggtgaagggggtgccggagcctcccgtntgcccaaatattttgcat 60
            |||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||||
Sbjct: 3602 cgaactgcacag-aggtgaaggggttgccgcagcctcccgtctgcccaaatattttgcat 3544

                                                                        
Query: 61   ntctgaggcccagcctacccaccatggaacaaaaccaataacttaacacttgttgcatgt 120
             | ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3543 atatgaggcccagc-tacccaccatggaacaaaaccaatagcttaacacttgttgcatgt 3485

                              
Query: 121  ttgttatctatctacaca 138
            ||||| ||||||||||||
Sbjct: 3484 ttgttttctatctacaca 3467

>emb|AJ418551.1|SAU418551 Sparus aurata satellite DNA, clone SAgenomic-IMBB09
          Length = 597

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 99  taacttaacacttgttgcatg 119
           |||||||||||||||||||||
Sbjct: 395 taacttaacacttgttgcatg 375

>gb|AC148098.3| Medicago truncatula clone mth2-15b16, complete sequence
          Length = 97953

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   cttaacacttgttgcatgtt 121
             ||||||||||||||||||||
Sbjct: 25650 cttaacacttgttgcatgtt 25631

>gb|AC150207.2| Medicago truncatula chromosome 2 BAC clone mte1-29a5, complete sequence
          Length = 124676

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   cttaacacttgttgcatgtt 121
             ||||||||||||||||||||
Sbjct: 36943 cttaacacttgttgcatgtt 36924

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     ggtgaagggggtgccggagc 34
              ||||||||||||||||||||
Sbjct: 425489 ggtgaagggggtgccggagc 425470

>gb|AC147801.7| Mus musculus chromosome 7, clone RP24-282E23, complete sequence
          Length = 149925

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 114   tgcatgtttgttatctatctaca 136
             ||||| |||||||||||||||||
Sbjct: 49210 tgcatttttgttatctatctaca 49188

>gb|AC134648.2| Homo sapiens 3 BAC RP11-449I18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 32792

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 100   aacttaacacttgttgcat 118
             |||||||||||||||||||
Sbjct: 10607 aacttaacacttgttgcat 10625

>emb|AL358781.19| Human DNA sequence from clone RP11-334J6 on chromosome 9 Contains the 3'
              end of the gene for a novel protein (KIAA0515), the RNU62
              gene for U62 small nucleolar RNA, a novel gene identical to
              the RNU62 gene, the POMT1 gene for
              protein-O-mannosyltransferase 1, a novel gene, the gene for
              uridine-cytidine kinase 1 (UCK1) and three CpG islands,
              complete sequence
          Length = 147492

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 65     gaggcccagcctacccacc 83
              |||||||||||||||||||
Sbjct: 134157 gaggcccagcctacccacc 134139

>gb|AC123021.9| Homo sapiens 12 BAC RP11-255P23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 104395

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 107   cacttgttgcatgtttgttatct 129
             ||||||||||||||||| |||||
Sbjct: 63698 cacttgttgcatgtttgatatct 63720

>ref|XM_682633.1| PREDICTED: Danio rerio similar to alsin (LOC559301), partial mRNA
          Length = 4269

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 9    acagtaggtgaagggggtgccggagcc 35
            |||| ||||||||| ||||||||||||
Sbjct: 2088 acagcaggtgaaggaggtgccggagcc 2114

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 113      ttgcatgtttgttatctat 131
                |||||||||||||||||||
Sbjct: 24079702 ttgcatgtttgttatctat 24079720

>gb|AC129176.6| Mus musculus BAC clone RP23-124D10 from chromosome unknown, complete
             sequence
          Length = 211031

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 114   tgcatgtttgttatctatctaca 136
             ||||| |||||||||||||||||
Sbjct: 56583 tgcatttttgttatctatctaca 56605

>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
          Length = 1894275

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 109     cttgttgcatgtttgttat 127
               |||||||||||||||||||
Sbjct: 1351406 cttgttgcatgtttgttat 1351388

>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1710_H11
          Length = 136107

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 113   ttgcatgtttgttatctat 131
             |||||||||||||||||||
Sbjct: 13117 ttgcatgtttgttatctat 13135

>emb|AL929411.11| Mouse DNA sequence from clone RP23-353O20 on chromosome 2, complete
              sequence
          Length = 149594

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 2      gaactgcacagtaggtgaa 20
              |||||||||||||||||||
Sbjct: 124466 gaactgcacagtaggtgaa 124448


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,252,642
Number of Sequences: 3902068
Number of extensions: 1252642
Number of successful extensions: 80693
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80634
Number of HSP's gapped (non-prelim): 58
length of query: 138
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 117
effective length of database: 17,151,101,840
effective search space: 2006678915280
effective search space used: 2006678915280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)