ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd19a10 |
|---|---|
| Clone Library Name | barley_pub |
>BT3L4_MOUSE (Q9CQH7) Transcription factor BTF3 homolog 4 (Basic transcription| factor 3-like 4) Length = 158 Score = 139 bits (351), Expect = 7e-33 Identities = 69/117 (58%), Positives = 90/117 (76%), Gaps = 1/117 (0%) Frame = -3 Query: 660 KWQVPVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVI 484 K Q VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I GIEEVN+ KDD VI Sbjct: 8 KLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVI 67 Query: 483 QFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQV 313 F NPKVQAS+ ANT+ ++G + K + ++LP I++QLG D+L +LR+LAEQF +QV Sbjct: 68 HFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQV 124
>BT3L4_HUMAN (Q96K17) Transcription factor BTF3 homolog 4 (Basic transcription| factor 3-like 4) Length = 158 Score = 139 bits (351), Expect = 7e-33 Identities = 69/117 (58%), Positives = 90/117 (76%), Gaps = 1/117 (0%) Frame = -3 Query: 660 KWQVPVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVI 484 K Q VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I GIEEVN+ KDD VI Sbjct: 8 KLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVI 67 Query: 483 QFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQV 313 F NPKVQAS+ ANT+ ++G + K + ++LP I++QLG D+L +LR+LAEQF +QV Sbjct: 68 HFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQV 124
>BTF3_HUMAN (P20290) Transcription factor BTF3 (RNA polymerase B transcription| factor 3) Length = 206 Score = 138 bits (348), Expect = 2e-32 Identities = 70/116 (60%), Positives = 89/116 (76%), Gaps = 1/116 (0%) Frame = -3 Query: 660 KWQVPVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVI 484 K Q VR GGKG+ RRKKK VH+T T DDK+LQ +LK++GVN I GIEEVN+F + VI Sbjct: 57 KLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVI 116 Query: 483 QFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQ 316 F NPKVQAS+ ANT+ ++G +TK+L ++LPSI+NQLG D+L +LRRLAE KQ Sbjct: 117 HFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQ 172
>BTF3_MOUSE (Q64152) Transcription factor BTF3 (RNA polymerase B transcription| factor 3) Length = 204 Score = 138 bits (348), Expect = 2e-32 Identities = 70/116 (60%), Positives = 89/116 (76%), Gaps = 1/116 (0%) Frame = -3 Query: 660 KWQVPVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVI 484 K Q VR GGKG+ RRKKK VH+T T DDK+LQ +LK++GVN I GIEEVN+F + VI Sbjct: 55 KLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVI 114 Query: 483 QFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQ 316 F NPKVQAS+ ANT+ ++G +TK+L ++LPSI+NQLG D+L +LRRLAE KQ Sbjct: 115 HFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQ 170
>BTF3_CAEEL (Q18885) Transcription factor BTF3 homolog (Inhibitor of cell death| 1) Length = 161 Score = 129 bits (325), Expect = 7e-30 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Frame = -3 Query: 672 KSSRKWQVPVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD 493 K + Q VR GGKG+ RRKKK +HKT DDK+LQS LK++ V IPGIEEVN+ KDD Sbjct: 11 KKLQAQQEHVRIGGKGTPRRKKKVIHKTAAADDKKLQSNLKKLSVTNIPGIEEVNMIKDD 70 Query: 492 -VVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQ 316 VI F NPKVQ S+ ANT+ V+G+ K++ ++LP I+NQLGP++L +L++LA K Sbjct: 71 GTVIHFNNPKVQTSVPANTFSVTGSADNKQITEMLPGILNQLGPESLTHLKKLANNVTKL 130 Query: 315 VP 310 P Sbjct: 131 GP 132
>BT3L3_HUMAN (Q13892) Transcription factor BTF3 homolog 3 (Basic transcription| factor 3-like 3) Length = 214 Score = 120 bits (302), Expect = 3e-27 Identities = 60/116 (51%), Positives = 83/116 (71%), Gaps = 1/116 (0%) Frame = -3 Query: 660 KWQVPVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVI 484 K Q VR GGKG+ RKKK H+T T DDK+LQ +LK++ VN I GIE+VN+F + VI Sbjct: 43 KLQAQVRIGGKGTAHRKKKVFHRTATADDKKLQFSLKKLQVNNISGIEKVNMFTNQGTVI 102 Query: 483 QFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQ 316 F NPK QAS+ NT+ ++G + K++ ++LPS+++QLG D+L +LRRLAE KQ Sbjct: 103 HFNNPKFQASLAVNTFTITGHAEAKQVTEMLPSVLSQLGADSLTSLRRLAEVLPKQ 158
>BTF3_SCHPO (Q92371) Transcription factor BTF3 homolog| Length = 151 Score = 91.7 bits (226), Expect = 2e-18 Identities = 49/116 (42%), Positives = 73/116 (62%), Gaps = 3/116 (2%) Frame = -3 Query: 660 KWQVPVRTGGKGSMRRKKKAVHKT--TTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDDV- 490 K Q R GGKG+ RRK K K+ + DDK++Q LK++ + + GI+EVN+FK+D Sbjct: 8 KLQAGARIGGKGTPRRKVKKPSKSAMSAADDKKVQGALKKLNMQNLAGIQEVNMFKEDGG 67 Query: 489 VIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQ 322 VI F P V +S+ T + G + K L ++LP I+N LGP++L LR++AEQ + Sbjct: 68 VINFRAPTVHSSLPNETTAIYGKAEEKTLSEILPGILNNLGPESLTALRQMAEQLK 123
>BT3L1_HUMAN (Q13890) Transcription factor BTF3 homolog 1 (Basic transcription| factor 3-like 1) Length = 111 Score = 88.2 bits (217), Expect = 2e-17 Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 1/94 (1%) Frame = -3 Query: 660 KWQVPVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIF-KDDVVI 484 K Q V TG KG+ RKK VH TT +DK+ Q +LK++GVN IPGIEEVN+F VI Sbjct: 12 KRQAEVHTGRKGTAHRKK-VVH--TTAEDKKFQFSLKKLGVNNIPGIEEVNMFTHQGTVI 68 Query: 483 QFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSI 382 F NP+VQAS+ ANT+ ++G +TK+L ++L SI Sbjct: 69 HFNNPEVQASLAANTFTMTGHAETKQLTEMLLSI 102
>EGD1_YEAST (Q02642) BTF3 homolog EGD1 (GAL4 DNA-binding enhancer protein 1)| Length = 157 Score = 79.3 bits (194), Expect = 1e-14 Identities = 52/144 (36%), Positives = 66/144 (45%), Gaps = 1/144 (0%) Frame = -3 Query: 642 RTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFLNPK 466 + GG KK DD +LQS L ++ TI + E N FKDD V+ F Sbjct: 19 KVGGTRRKLNKKAGSSAGANKDDTKLQSQLAKLHAVTIDNVAEANFFKDDGKVMHFNKVG 78 Query: 465 VQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQVPXXXXXXXX 286 VQ + NT V G PQ K LQDL P II+QLGP+ + L +LA Q +K Sbjct: 79 VQVAAQHNTSVFYGLPQEKNLQDLFPGIISQLGPEAIQALSQLAAQMEKH---------- 128 Query: 285 XXXXXXXXXXXXXDVPELVPGETF 214 +PELV G+TF Sbjct: 129 EAKAPADAEKKDEAIPELVEGQTF 152
>BTT1_YEAST (P40314) BTF3 homolog BTT1| Length = 149 Score = 53.5 bits (127), Expect = 7e-07 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%) Frame = -3 Query: 642 RTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFLNPK 466 + GG KK ++ D+ +LQ+ L ++ TI + E N FK + V+ F + Sbjct: 19 KVGGTRRKINKKGNLYNNNDKDNTKLQAELHKLHPMTIENVAEANFFKKNGKVLHFNSAV 78 Query: 465 VQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQ 316 VQ + N ++ G P+ L L PS+ +QLG L+ L LA + + Sbjct: 79 VQIAPQCNLTMIHGQPKENTLNGLYPSVASQLGSQELEYLTGLAHNLENE 128
>BT3L2_HUMAN (Q13891) Transcription factor BTF3 homolog 2 (Basic transcription| factor 3-like 2) Length = 67 Score = 42.0 bits (97), Expect = 0.002 Identities = 24/59 (40%), Positives = 34/59 (57%) Frame = -3 Query: 660 KWQVPVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDDVVI 484 K Q V GG +KK VH+T T +DK+ Q +LK++ I GIEEVN+F + + Sbjct: 13 KLQAKVPIGGTA---HRKKVVHRTATANDKKRQFSLKKL---EISGIEEVNMFTNQATV 65
>KAD2_SYNY3 (P72641) Probable adenylate kinase 2 (EC 2.7.4.3) (ATP-AMP| transphosphorylase 2) Length = 181 Score = 34.7 bits (78), Expect = 0.32 Identities = 14/60 (23%), Positives = 31/60 (51%) Frame = -3 Query: 546 VGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLG 367 +G+ P +E ++ D ++I+F+ ++ G W++ G P+T + L ++ LG Sbjct: 45 LGIKAKPYVERGDLLPDPMMIEFIQQRLVQEDGGQGWILEGYPRTAFQAEELDFLLEDLG 104
>ERG27_KLULA (Q6CJC2) 3-keto-steroid reductase (EC 1.1.1.270)| Length = 346 Score = 32.3 bits (72), Expect = 1.6 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%) Frame = -3 Query: 555 LKRVGVNTIPG---IEEVNIFKDDVVIQFLNPKVQASIGANTWV--VSGTPQTKKLQD-- 397 ++RVGV + G + + N+F +IQ L P +QA G WV + P+ LQD Sbjct: 134 IQRVGVKSKDGMGLVFQANVFGPYYLIQKLLPLLQAGQGTVVWVSSIMSAPKYLSLQDIQ 193 Query: 396 LLPSIINQLGPDNLDNL 346 LL S ++ G L +L Sbjct: 194 LLESDVSYEGSKRLVDL 210
>POL_BLVJ (P03361) Pol polyprotein [Contains: Reverse| transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 852 Score = 30.8 bits (68), Expect = 4.6 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 13/76 (17%) Frame = -3 Query: 519 EEVNIFKDDVVIQFLNP----KVQASIGANTWVVSGTPQTKKLQDLL---------PSII 379 E++ ++ +Q +P ++QA +G WV GTP T++ LL P I Sbjct: 214 EQIVTYQSLPTLQISSPISLHQLQAVLGDLQWVSRGTPTTRRPLQLLYSSLKRHHDPRAI 273 Query: 378 NQLGPDNLDNLRRLAE 331 QL P+ L + L + Sbjct: 274 IQLSPEQLQGIAELRQ 289
>KAD2_ANASP (Q8Z0M3) Probable adenylate kinase 2 (EC 2.7.4.3) (ATP-AMP| transphosphorylase 2) Length = 184 Score = 30.4 bits (67), Expect = 6.0 Identities = 15/65 (23%), Positives = 36/65 (55%) Frame = -3 Query: 561 STLKRVGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSI 382 S L +G + P + + + D+++I+ + +++ S + WV+ G P+T + L + Sbjct: 40 SHLSELGRHAQPYMIKGELVPDEMIIELIRLRLKKSDVIDGWVLEGYPRTAFQAEELDFL 99 Query: 381 INQLG 367 +++LG Sbjct: 100 LDELG 104
>TRXR_CAEEL (Q17745) Thioredoxin reductase (EC 1.8.1.9) (TR-Se) (TRR)| Length = 667 Score = 30.0 bits (66), Expect = 7.9 Identities = 22/61 (36%), Positives = 29/61 (47%) Frame = -3 Query: 624 SMRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGA 445 S KKK V K T D+ L ST R IPG++E I DD+ +P +GA Sbjct: 302 SATNKKKKVEKLTA--DRFLISTGLRPKYPEIPGVKEYTITSDDLFQLPYSPGKTLCVGA 359 Query: 444 N 442 + Sbjct: 360 S 360 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,536,607 Number of Sequences: 219361 Number of extensions: 1797000 Number of successful extensions: 5474 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 5230 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5461 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7762912789 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
