ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd19a09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197052.1| Oryza sativa (japonica cultivar-group) putative transcription factor (OSJNBa0012L23.32), mRNA Length = 785 Score = 460 bits (232), Expect = e-126 Identities = 359/400 (89%), Gaps = 6/400 (1%) Strand = Plus / Minus Query: 190 cctttttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcat 249 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||| Sbjct: 596 cctttttctcttctgctgcctcctcaaatgtctcaccagggacaagctcaggaacatcat 537 Query: 250 catcgtcgtcagcctgagcagcacctgcactggcaccagcctcgatgccagcggcaccac 309 ||||||| | |||||||||| || ||||||||||||||||| |||| |||||| Sbjct: 536 catcgtc---accctgagcagctccagcactggcaccagcctcttcaccagaagcaccag 480 Query: 310 cagggacctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggac 369 || ||||||||||||||||||||||||||||||| || || |||||||||||||||| Sbjct: 479 gag---cctgcttttggaattgctctgcaagcctccgcagattatccaagttgtcaggac 423 Query: 370 caagttgattgataattgatggcagcagatcttgcagtttctttgtctgtggagttccac 429 ||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 422 caagttggttgataattgatggcagcagatcctgcagcttctttgtttgtggagttccac 363 Query: 430 tgaccacccatgtattagcgccaattgaagcttgcactttaggattcagaaactgaataa 489 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 362 tgacaacccatgtattagcaccaattgaagcttgcactttaggattcagaaactgaataa 303 Query: 490 ccacatcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactc 549 ||||||||||||| || ||||| |||||||| || |||||||||||||| |||||||||| Sbjct: 302 ccacatcatccttgaaaatgttaacctcttcaatgccagggatggtgtttactcctactc 243 Query: 550 ttttcagggtactctggagccttttgtcatctgtagttgt 589 ||||||| || ||||| || |||||||||||||| ||||| Sbjct: 242 ttttcagagtgctctgaagtcttttgtcatctgtggttgt 203 Score = 61.9 bits (31), Expect = 2e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 43 cgtacatgacaaaaccggaccactggcacaaataaggtaggtcagag 89 ||||||||||||||||| | ||||| ||||||||||||||||||||| Sbjct: 723 cgtacatgacaaaaccg-agcactgacacaaataaggtaggtcagag 678
>dbj|AK121674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068E07, full insert sequence Length = 756 Score = 460 bits (232), Expect = e-126 Identities = 359/400 (89%), Gaps = 6/400 (1%) Strand = Plus / Minus Query: 190 cctttttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcat 249 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||| Sbjct: 567 cctttttctcttctgctgcctcctcaaatgtctcaccagggacaagctcaggaacatcat 508 Query: 250 catcgtcgtcagcctgagcagcacctgcactggcaccagcctcgatgccagcggcaccac 309 ||||||| | |||||||||| || ||||||||||||||||| |||| |||||| Sbjct: 507 catcgtc---accctgagcagctccagcactggcaccagcctcttcaccagaagcaccag 451 Query: 310 cagggacctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggac 369 || ||||||||||||||||||||||||||||||| || || |||||||||||||||| Sbjct: 450 gag---cctgcttttggaattgctctgcaagcctccgcagattatccaagttgtcaggac 394 Query: 370 caagttgattgataattgatggcagcagatcttgcagtttctttgtctgtggagttccac 429 ||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 393 caagttggttgataattgatggcagcagatcctgcagcttctttgtttgtggagttccac 334 Query: 430 tgaccacccatgtattagcgccaattgaagcttgcactttaggattcagaaactgaataa 489 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 333 tgacaacccatgtattagcaccaattgaagcttgcactttaggattcagaaactgaataa 274 Query: 490 ccacatcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactc 549 ||||||||||||| || ||||| |||||||| || |||||||||||||| |||||||||| Sbjct: 273 ccacatcatccttgaaaatgttaacctcttcaatgccagggatggtgtttactcctactc 214 Query: 550 ttttcagggtactctggagccttttgtcatctgtagttgt 589 ||||||| || ||||| || |||||||||||||| ||||| Sbjct: 213 ttttcagagtgctctgaagtcttttgtcatctgtggttgt 174 Score = 61.9 bits (31), Expect = 2e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 43 cgtacatgacaaaaccggaccactggcacaaataaggtaggtcagag 89 ||||||||||||||||| | ||||| ||||||||||||||||||||| Sbjct: 694 cgtacatgacaaaaccg-agcactgacacaaataaggtaggtcagag 649
>gb|AY108350.1| Zea mays PCO126681 mRNA sequence Length = 951 Score = 414 bits (209), Expect = e-112 Identities = 350/394 (88%), Gaps = 6/394 (1%) Strand = Plus / Minus Query: 190 cctttttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcat 249 ||||||||||||| || ||||| |||||||||||||||||||| |||||||| || |||| Sbjct: 614 cctttttctcttccgcagcctcctcaaatgtctctccagggacgagctcaggaacgtcat 555 Query: 250 catcgtcgtcagcctgagcagcacctgcactggcaccagcctcgatgccagcggcaccac 309 | || ||||| |||||||||||| || ||||| |||||||| ||| | | | | ||| Sbjct: 554 cgtcatcgtc---ctgagcagcaccagcgctggcgccagcctc--tgc-acctgaagcac 501 Query: 310 cagggacctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggac 369 ||||| ||||||| ||||||||||| ||||||||||| |||||||| | ||||||||| | Sbjct: 500 caggggcctgcttctggaattgctccgcaagcctccgcaggttgtctaggttgtcagggc 441 Query: 370 caagttgattgataattgatggcagcagatcttgcagtttctttgtctgtggagttccac 429 | || || |||||||| || || |||||||||||||| |||||||||||||||||||||| Sbjct: 440 cgagctggttgataatggacggaagcagatcttgcagcttctttgtctgtggagttccac 381 Query: 430 tgaccacccatgtattagcgccaattgaagcttgcactttaggattcagaaactgaataa 489 ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 380 tgaccacccatgtattagcaccaattgaagcttgcactttaggattcacaaactgaataa 321 Query: 490 ccacatcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactc 549 | ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| || Sbjct: 320 caacatcatccttaaagatgttgacctcttcaataccaggaatggtgttcactcctattc 261 Query: 550 ttttcagggtactctggagccttttgtcatctgt 583 |||||||||| ||||| |||||||| |||||||| Sbjct: 260 ttttcagggtgctctgaagccttttatcatctgt 227 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 67 ggcacaaataaggtaggtcagagttc 92 |||||||||||||||||||||||||| Sbjct: 715 ggcacaaataaggtaggtcagagttc 690
>gb|BT017386.1| Zea mays clone EL01N0327A01.c mRNA sequence Length = 896 Score = 402 bits (203), Expect = e-109 Identities = 353/400 (88%), Gaps = 6/400 (1%) Strand = Plus / Minus Query: 190 cctttttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcat 249 ||||||||||||| |||||||| ||||||||||||||||||||||||||||| || |||| Sbjct: 600 cctttttctcttccgcggcctcctcaaatgtctctccagggacaagctcaggaacgtcat 541 Query: 250 catcgtcgtcagcctgagcagcacctgcactggcaccagcctcgatgccagcggcaccac 309 |||| ||||| |||| |||| || || |||||||||||||| ||| | | | | ||| Sbjct: 540 catcatcgtc---ctgaacagccccagcgctggcaccagcctc--tgc-accagaagcac 487 Query: 310 cagggacctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggac 369 ||| | ||||||| |||||||||||||| |||||||| || ||||||| ||||||||||| Sbjct: 486 cagaggcctgcttctggaattgctctgcgagcctccgcagattgtccaggttgtcaggac 427 Query: 370 caagttgattgataattgatggcagcagatcttgcagtttctttgtctgtggagttccac 429 |||| || |||||||| || || |||||||||||||| |||||||||||||||||||||| Sbjct: 426 caagctggttgataatcgacggaagcagatcttgcagcttctttgtctgtggagttccac 367 Query: 430 tgaccacccatgtattagcgccaattgaagcttgcactttaggattcagaaactgaataa 489 ||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||| Sbjct: 366 tgaccacccatgtattagcaccaattgacgcttgcactttaggatttacaaactgaataa 307 Query: 490 ccacatcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactc 549 | ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| || Sbjct: 306 caacatcatccttaaagatgttgacctcttcaataccaggaatgctgttcactcctattc 247 Query: 550 ttttcagggtactctggagccttttgtcatctgtagttgt 589 |||||| ||| || || |||| |||||||||||| ||||| Sbjct: 246 ttttcaaggtgctttgaagccgtttgtcatctgtggttgt 207 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 62 ccactggcacaaataaggtaggtcagagttctc 94 |||| |||||||||||||||||||||||||||| Sbjct: 695 ccacaggcacaaataaggtaggtcagagttctc 663
>gb|AY104643.1| Zea mays PCO126682 mRNA sequence Length = 901 Score = 402 bits (203), Expect = e-109 Identities = 353/400 (88%), Gaps = 6/400 (1%) Strand = Plus / Minus Query: 190 cctttttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcat 249 ||||||||||||| |||||||| ||||||||||||||||||||||||||||| || |||| Sbjct: 599 cctttttctcttccgcggcctcctcaaatgtctctccagggacaagctcaggaacgtcat 540 Query: 250 catcgtcgtcagcctgagcagcacctgcactggcaccagcctcgatgccagcggcaccac 309 |||| ||||| |||| |||| || || |||||||||||||| ||| | | | | ||| Sbjct: 539 catcatcgtc---ctgaacagccccagcgctggcaccagcctc--tgc-accagaagcac 486 Query: 310 cagggacctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggac 369 ||| | ||||||| |||||||||||||| |||||||| || ||||||| ||||||||||| Sbjct: 485 cagaggcctgcttctggaattgctctgcgagcctccgcagattgtccaggttgtcaggac 426 Query: 370 caagttgattgataattgatggcagcagatcttgcagtttctttgtctgtggagttccac 429 |||| || |||||||| || || |||||||||||||| |||||||||||||||||||||| Sbjct: 425 caagctggttgataatcgacggaagcagatcttgcagcttctttgtctgtggagttccac 366 Query: 430 tgaccacccatgtattagcgccaattgaagcttgcactttaggattcagaaactgaataa 489 ||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||| Sbjct: 365 tgaccacccatgtattagcaccaattgacgcttgcactttaggatttacaaactgaataa 306 Query: 490 ccacatcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactc 549 | ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| || Sbjct: 305 caacatcatccttaaagatgttgacctcttcaataccaggaatgctgttcactcctattc 246 Query: 550 ttttcagggtactctggagccttttgtcatctgtagttgt 589 |||||| ||| || || |||| |||||||||||| ||||| Sbjct: 245 ttttcaaggtgctttgaagccgtttgtcatctgtggttgt 206 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 62 ccactggcacaaataaggtaggtcagagttctc 94 |||| |||||||||||||||||||||||||||| Sbjct: 694 ccacaggcacaaataaggtaggtcagagttctc 662
>gb|BT017723.1| Zea mays clone EL01N0447D03.c mRNA sequence Length = 1077 Score = 375 bits (189), Expect = e-100 Identities = 345/394 (87%), Gaps = 6/394 (1%) Strand = Plus / Minus Query: 190 cctttttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcat 249 ||||||| | ||| || ||||| |||||||||| ||||||||| |||||||| || |||| Sbjct: 735 ccttttttttttccgcagcctcctcaaatgtctttccagggaccagctcaggaacgtcat 676 Query: 250 catcgtcgtcagcctgagcagcacctgcactggcaccagcctcgatgccagcggcaccac 309 | || ||| |||||||||| ||| || |||| |||||||| ||| | | | | ||| Sbjct: 675 cgtcatcg---gcctgagcagaaccagcgctggggccagcctc--tgc-acctgaagcac 622 Query: 310 cagggacctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggac 369 ||||| ||||||| ||||||||||| ||||||||||| |||||||| | ||||||||| | Sbjct: 621 caggggcctgcttctggaattgctccgcaagcctccgcaggttgtctaggttgtcagggc 562 Query: 370 caagttgattgataattgatggcagcagatcttgcagtttctttgtctgtggagttccac 429 | || || |||||||| || || |||||||||||||| |||||||||||||||||||||| Sbjct: 561 cgagctggttgataatggacggaagcagatcttgcagcttctttgtctgtggagttccac 502 Query: 430 tgaccacccatgtattagcgccaattgaagcttgcactttaggattcagaaactgaataa 489 ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 501 tgaccacccatgtattagcaccaattgaagcttgcactttaggattcacaaactgaataa 442 Query: 490 ccacatcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactc 549 | ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| || Sbjct: 441 caacatcatccttaaagatgttgacctcttcaataccaggaatggtgttcactcctattc 382 Query: 550 ttttcagggtactctggagccttttgtcatctgt 583 |||||||||| ||||| |||||||| |||||||| Sbjct: 381 ttttcagggtgctctgaagccttttatcatctgt 348 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 67 ggcacaaataaggtaggtcagagttc 92 ||||||||||||| |||||||||||| Sbjct: 836 ggcacaaataagggaggtcagagttc 811
>gb|AY224531.1| Oryza sativa (japonica cultivar-group) isolate 23311 putative transcription factor BTF3 mRNA, complete cds Length = 360 Score = 313 bits (158), Expect = 4e-82 Identities = 209/226 (92%) Strand = Plus / Minus Query: 364 caggaccaagttgattgataattgatggcagcagatcttgcagtttctttgtctgtggag 423 ||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 319 caggaccaagttggttgataattgatggcagcagatcctgcagcttctttgtttgtggag 260 Query: 424 ttccactgaccacccatgtattagcgccaattgaagcttgcactttaggattcagaaact 483 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 259 ttccactgacaacccatgtattagcaccaattgaagcttgcactttaggattcagaaact 200 Query: 484 gaataaccacatcatccttaaagatgttgacctcttcgataccagggatggtgttcactc 543 ||||||||||||||||||| || ||||| |||||||| || |||||||||||||| |||| Sbjct: 199 gaataaccacatcatccttgaaaatgttaacctcttcaatgccagggatggtgtttactc 140 Query: 544 ctactcttttcagggtactctggagccttttgtcatctgtagttgt 589 ||||||||||||| || ||||| || |||||||||||||| ||||| Sbjct: 139 ctactcttttcagagtgctctgaagtcttttgtcatctgtggttgt 94
>ref|XM_468566.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1848 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Minus Query: 315 acctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggaccaagt 374 |||||||| ||||| ||||| |||||||||| ||||||||||| ||| ||||| || | Sbjct: 1688 acctgcttctggaactgctcagcaagcctcctgaggttgtccaggttatcaggtcccaac 1629 Query: 375 tgattgataattgatggcagcagatcttgcagtttctttgtctgtggagttccactgacc 434 || ||||| |||| ||| |||||||||||||| ||||| |||||||| |||||||| || Sbjct: 1628 tggttgatgattgttggaagcagatcttgcagcttcttcgtctgtggtgttccactcact 1569 Query: 435 acccatgtattagcgccaattgaagcttgcactttaggattcagaaactgaataaccaca 494 ||||||||||| || ||||| || ||||||||||| |||||| |||| || ||||||||| Sbjct: 1568 acccatgtatttgcaccaatggatgcttgcacttttggattctgaaattggataaccaca 1509 Query: 495 tcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactcttttc 554 |||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 1508 tcatccttgaagatattgacctcttcgataccaggaatgttgttcactcctactcttttc 1449 Query: 555 agggtactctggagccttttgtcatc 580 | ||| || || ||||| |||||||| Sbjct: 1448 aaggtgctttgaagcctcttgtcatc 1423 Score = 87.7 bits (44), Expect = 4e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 195 ttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcatcatcg 254 ||||| ||||| ||||| || || |||||||||||||||||||||||||||||||| ||| Sbjct: 1793 ttctcctctgcagcctcctcgaacgtctctccagggacaagctcagggacatcatcgtcg 1734 Query: 255 tcgtcagcctgagcagcacctgcactggcaccagcctc 292 |||| ||||||| |||||| |||||||||||||| Sbjct: 1733 tcgt---cctgagcgttacctgcgctggcaccagcctc 1699
>gb|AY224525.1| Oryza sativa (japonica cultivar-group) isolate 20946 putative transcription factor BTF3 mRNA, complete cds Length = 528 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Minus Query: 315 acctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggaccaagt 374 |||||||| ||||| ||||| |||||||||| ||||||||||| ||| ||||| || | Sbjct: 368 acctgcttctggaactgctcagcaagcctcctgaggttgtccaggttatcaggtcccaac 309 Query: 375 tgattgataattgatggcagcagatcttgcagtttctttgtctgtggagttccactgacc 434 || ||||| |||| ||| |||||||||||||| ||||| |||||||| |||||||| || Sbjct: 308 tggttgatgattgttggaagcagatcttgcagcttcttcgtctgtggtgttccactcact 249 Query: 435 acccatgtattagcgccaattgaagcttgcactttaggattcagaaactgaataaccaca 494 ||||||||||| || ||||| || ||||||||||| |||||| |||| || ||||||||| Sbjct: 248 acccatgtatttgcaccaatggatgcttgcacttttggattctgaaattggataaccaca 189 Query: 495 tcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactcttttc 554 |||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 188 tcatccttgaagatattgacctcttcgataccaggaatgttgttcactcctactcttttc 129 Query: 555 agggtactctggagccttttgtcatc 580 | ||| || || ||||| |||||||| Sbjct: 128 aaggtgctttgaagcctcttgtcatc 103 Score = 87.7 bits (44), Expect = 4e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 195 ttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcatcatcg 254 ||||| ||||| ||||| || || |||||||||||||||||||||||||||||||| ||| Sbjct: 473 ttctcctctgcagcctcctcgaacgtctctccagggacaagctcagggacatcatcgtcg 414 Query: 255 tcgtcagcctgagcagcacctgcactggcaccagcctc 292 |||| ||||||| |||||| |||||||||||||| Sbjct: 413 tcgt---cctgagcgttacctgcgctggcaccagcctc 379
>dbj|AK121478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149H07, full insert sequence Length = 871 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Minus Query: 315 acctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggaccaagt 374 |||||||| ||||| ||||| |||||||||| ||||||||||| ||| ||||| || | Sbjct: 507 acctgcttctggaactgctcagcaagcctcctgaggttgtccaggttatcaggtcccaac 448 Query: 375 tgattgataattgatggcagcagatcttgcagtttctttgtctgtggagttccactgacc 434 || ||||| |||| ||| |||||||||||||| ||||| |||||||| |||||||| || Sbjct: 447 tggttgatgattgttggaagcagatcttgcagcttcttcgtctgtggtgttccactcact 388 Query: 435 acccatgtattagcgccaattgaagcttgcactttaggattcagaaactgaataaccaca 494 ||||||||||| || ||||| || ||||||||||| |||||| |||| || ||||||||| Sbjct: 387 acccatgtatttgcaccaatggatgcttgcacttttggattctgaaattggataaccaca 328 Query: 495 tcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactcttttc 554 |||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 327 tcatccttgaagatattgacctcttcgataccaggaatgttgttcactcctactcttttc 268 Query: 555 agggtactctggagccttttgtcatc 580 | ||| || || ||||| |||||||| Sbjct: 267 aaggtgctttgaagcctcttgtcatc 242 Score = 87.7 bits (44), Expect = 4e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 195 ttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcatcatcg 254 ||||| ||||| ||||| || || |||||||||||||||||||||||||||||||| ||| Sbjct: 612 ttctcctctgcagcctcctcgaacgtctctccagggacaagctcagggacatcatcgtcg 553 Query: 255 tcgtcagcctgagcagcacctgcactggcaccagcctc 292 |||| ||||||| |||||| |||||||||||||| Sbjct: 552 tcgt---cctgagcgttacctgcgctggcaccagcctc 518
>dbj|AK061661.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E03, full insert sequence Length = 648 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Minus Query: 315 acctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggaccaagt 374 |||||||| ||||| ||||| |||||||||| ||||||||||| ||| ||||| || | Sbjct: 291 acctgcttctggaactgctcagcaagcctcctgaggttgtccaggttatcaggtcccaac 232 Query: 375 tgattgataattgatggcagcagatcttgcagtttctttgtctgtggagttccactgacc 434 || ||||| |||| ||| |||||||||||||| ||||| |||||||| |||||||| || Sbjct: 231 tggttgatgattgttggaagcagatcttgcagcttcttcgtctgtggtgttccactcact 172 Query: 435 acccatgtattagcgccaattgaagcttgcactttaggattcagaaactgaataaccaca 494 ||||||||||| || ||||| || ||||||||||| |||||| |||| || ||||||||| Sbjct: 171 acccatgtatttgcaccaatggatgcttgcacttttggattctgaaattggataaccaca 112 Query: 495 tcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactcttttc 554 |||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 111 tcatccttgaagatattgacctcttcgataccaggaatgttgttcactcctactcttttc 52 Query: 555 agggtactctggagccttttgtcatc 580 | ||| || || ||||| |||||||| Sbjct: 51 aaggtgctttgaagcctcttgtcatc 26 Score = 87.7 bits (44), Expect = 4e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 195 ttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcatcatcg 254 ||||| ||||| ||||| || || |||||||||||||||||||||||||||||||| ||| Sbjct: 396 ttctcctctgcagcctcctcgaacgtctctccagggacaagctcagggacatcatcgtcg 337 Query: 255 tcgtcagcctgagcagcacctgcactggcaccagcctc 292 |||| ||||||| |||||| |||||||||||||| Sbjct: 336 tcgt---cctgagcgttacctgcgctggcaccagcctc 302
>dbj|AK069885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037P03, full insert sequence Length = 1334 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Minus Query: 409 tctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcactt 468 |||| |||||||| |||||||| || ||||||||||| || ||||| || |||||||||| Sbjct: 628 tcttcgtctgtggtgttccactcactacccatgtatttgcaccaatggatgcttgcactt 569 Query: 469 taggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgataccag 528 | |||||| |||| || ||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 568 ttggattctgaaattggataaccacatcatccttgaagatattgacctcttcgataccag 509 Query: 529 ggatggtgttcactcctactcttttcagggtactctggagccttttgtcatc 580 | ||| ||||||||||||||||||||| ||| || || ||||| |||||||| Sbjct: 508 gaatgttgttcactcctactcttttcaaggtgctttgaagcctcttgtcatc 457 Score = 87.7 bits (44), Expect = 4e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 195 ttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcatcatcg 254 ||||| ||||| ||||| || || |||||||||||||||||||||||||||||||| ||| Sbjct: 1061 ttctcctctgcagcctcctcgaacgtctctccagggacaagctcagggacatcatcgtcg 1002 Query: 255 tcgtcagcctgagcagcacctgcactggcaccagcctc 292 |||| ||||||| |||||| |||||||||||||| Sbjct: 1001 tcgt---cctgagcgttacctgcgctggcaccagcctc 967 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 315 acctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggaccaagt 374 |||||||| ||||| ||||| |||||||||| ||||||||||| ||| ||||| || | Sbjct: 956 acctgcttctggaactgctcagcaagcctcctgaggttgtccaggttatcaggtcccaac 897 Query: 375 tgattgataattgatggcagcagatcttgcag 406 || ||||| |||| ||| |||||||||||||| Sbjct: 896 tggttgatgattgttggaagcagatcttgcag 865
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 161 bits (81), Expect = 3e-36 Identities = 157/181 (86%), Gaps = 6/181 (3%) Strand = Plus / Plus Query: 190 cctttttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcat 249 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||| Sbjct: 80789 cctttttctcttctgctgcctcctcaaatgtctcaccagggacaagctcaggaacatcat 80848 Query: 250 catcgtcgtcagcctgagcagcacctgcactggcaccagcctcgatgccagcggcaccac 309 || |||||| |||||||||| || ||||||||||||||||| || | | | ||| Sbjct: 80849 ca---tcgtcaccctgagcagctccagcactggcaccagcctc---ttcaccagaagcac 80902 Query: 310 cagggacctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggac 369 |||| ||||||||||||||||||||||||||||||| || || |||||||||||||||| Sbjct: 80903 caggagcctgcttttggaattgctctgcaagcctccgcagattatccaagttgtcaggac 80962 Query: 370 c 370 | Sbjct: 80963 c 80963 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 ||||||||||||||||||||||||||||||||||||| || ||||| |||||||| || | Sbjct: 81644 ctttaggattcagaaactgaataaccacatcatccttgaaaatgttaacctcttcaatgc 81703 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatctgtag 585 ||||||||||||| ||||||||||||||||| || ||||| || |||||||||||||| | Sbjct: 81704 cagggatggtgtttactcctactcttttcagagtgctctgaagtcttttgtcatctgtgg 81763 Query: 586 ttgt 589 |||| Sbjct: 81764 ttgt 81767 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 409 tctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcact 467 ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 81499 tctttgtttgtggagttccactgacaacccatgtattagcaccaattgaagcttgcact 81557 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 368 accaagttgattgataattgatggcagcagatcttgcag 406 ||||||||| ||||||||||||||||||||||| ||||| Sbjct: 81184 accaagttggttgataattgatggcagcagatcctgcag 81222 Score = 61.9 bits (31), Expect = 2e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 43 cgtacatgacaaaaccggaccactggcacaaataaggtaggtcagag 89 ||||||||||||||||| | ||||| ||||||||||||||||||||| Sbjct: 80662 cgtacatgacaaaaccg-agcactgacacaaataaggtaggtcagag 80707
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 161 bits (81), Expect = 3e-36 Identities = 157/181 (86%), Gaps = 6/181 (3%) Strand = Plus / Plus Query: 190 cctttttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcat 249 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||| Sbjct: 17725669 cctttttctcttctgctgcctcctcaaatgtctcaccagggacaagctcaggaacatcat 17725728 Query: 250 catcgtcgtcagcctgagcagcacctgcactggcaccagcctcgatgccagcggcaccac 309 || |||||| |||||||||| || ||||||||||||||||| || | | | ||| Sbjct: 17725729 ca---tcgtcaccctgagcagctccagcactggcaccagcctc---ttcaccagaagcac 17725782 Query: 310 cagggacctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggac 369 |||| ||||||||||||||||||||||||||||||| || || |||||||||||||||| Sbjct: 17725783 caggagcctgcttttggaattgctctgcaagcctccgcagattatccaagttgtcaggac 17725842 Query: 370 c 370 | Sbjct: 17725843 c 17725843 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 ||||||||||||||||||||||||||||||||||||| || ||||| |||||||| || | Sbjct: 17726524 ctttaggattcagaaactgaataaccacatcatccttgaaaatgttaacctcttcaatgc 17726583 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatctgtag 585 ||||||||||||| ||||||||||||||||| || ||||| || |||||||||||||| | Sbjct: 17726584 cagggatggtgtttactcctactcttttcagagtgctctgaagtcttttgtcatctgtgg 17726643 Query: 586 ttgt 589 |||| Sbjct: 17726644 ttgt 17726647 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 409 tctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcact 467 ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 17726379 tctttgtttgtggagttccactgacaacccatgtattagcaccaattgaagcttgcact 17726437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 368 accaagttgattgataattgatggcagcagatcttgcag 406 ||||||||| ||||||||||||||||||||||| ||||| Sbjct: 17726064 accaagttggttgataattgatggcagcagatcctgcag 17726102 Score = 61.9 bits (31), Expect = 2e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 43 cgtacatgacaaaaccggaccactggcacaaataaggtaggtcagag 89 ||||||||||||||||| | ||||| ||||||||||||||||||||| Sbjct: 17725542 cgtacatgacaaaaccg-agcactgacacaaataaggtaggtcagag 17725587
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 161 bits (81), Expect = 3e-36 Identities = 157/181 (86%), Gaps = 6/181 (3%) Strand = Plus / Plus Query: 190 cctttttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcat 249 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||| Sbjct: 17734922 cctttttctcttctgctgcctcctcaaatgtctcaccagggacaagctcaggaacatcat 17734981 Query: 250 catcgtcgtcagcctgagcagcacctgcactggcaccagcctcgatgccagcggcaccac 309 || |||||| |||||||||| || ||||||||||||||||| || | | | ||| Sbjct: 17734982 ca---tcgtcaccctgagcagctccagcactggcaccagcctc---ttcaccagaagcac 17735035 Query: 310 cagggacctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcaggac 369 |||| ||||||||||||||||||||||||||||||| || || |||||||||||||||| Sbjct: 17735036 caggagcctgcttttggaattgctctgcaagcctccgcagattatccaagttgtcaggac 17735095 Query: 370 c 370 | Sbjct: 17735096 c 17735096 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 ||||||||||||||||||||||||||||||||||||| || ||||| |||||||| || | Sbjct: 17735777 ctttaggattcagaaactgaataaccacatcatccttgaaaatgttaacctcttcaatgc 17735836 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatctgtag 585 ||||||||||||| ||||||||||||||||| || ||||| || |||||||||||||| | Sbjct: 17735837 cagggatggtgtttactcctactcttttcagagtgctctgaagtcttttgtcatctgtgg 17735896 Query: 586 ttgt 589 |||| Sbjct: 17735897 ttgt 17735900 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 409 tctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcact 467 ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 17735632 tctttgtttgtggagttccactgacaacccatgtattagcaccaattgaagcttgcact 17735690 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 368 accaagttgattgataattgatggcagcagatcttgcag 406 ||||||||| ||||||||||||||||||||||| ||||| Sbjct: 17735317 accaagttggttgataattgatggcagcagatcctgcag 17735355 Score = 61.9 bits (31), Expect = 2e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 43 cgtacatgacaaaaccggaccactggcacaaataaggtaggtcagag 89 ||||||||||||||||| | ||||| ||||||||||||||||||||| Sbjct: 17734795 cgtacatgacaaaaccg-agcactgacacaaataaggtaggtcagag 17734840
>gb|AY103817.1| Zea mays PCO108140 mRNA sequence Length = 904 Score = 147 bits (74), Expect = 5e-32 Identities = 224/274 (81%) Strand = Plus / Minus Query: 307 caccagggacctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcag 366 ||||||| |||||||| ||||| ||||| ||||||||| |||||| |||| ||| |||| Sbjct: 470 caccaggtacctgcttctggaaatgctcagcaagcctcttgaggttctccaggttatcag 411 Query: 367 gaccaagttgattgataattgatggcagcagatcttgcagtttctttgtctgtggagttc 426 | || ||||| |||||||||| |||||| || ||||| || | |||||||| || || Sbjct: 410 ggcccagttggttgataattgttggcagaaggtcttgtagactttttgtctggggtactc 351 Query: 427 cactgaccacccatgtattagcgccaattgaagcttgcactttaggattcagaaactgaa 486 ||||||| ||||||||||| || ||| || |||||||||||||| ||| | || || | Sbjct: 350 cactgactacccatgtatttgcaggaatggatgcttgcactttagggttctggaattgga 291 Query: 487 taaccacatcatccttaaagatgttgacctcttcgataccagggatggtgttcactccta 546 |||| | ||||||||| |||||||||||||| || |||||||| || ||||||||||| | Sbjct: 290 taacaatatcatccttgaagatgttgacctcctcaataccaggaatagtgttcactccaa 231 Query: 547 ctcttttcagggtactctggagccttttgtcatc 580 |||||||| || ||||| |||| |||||||| Sbjct: 230 ttcttttcaacgtgctctgaagccgcttgtcatc 197 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 207 gcctcttcaaatgtctctccagggacaagctcagggacatcatcatc 253 ||||| |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 549 gcctcctcaaatgtctctcctgggacaagctcagggacatcgtcatc 503
>gb|DQ205664.1| Glycine cyrtoloba BTF3-like protein 1 gene, partial sequence Length = 1239 Score = 127 bits (64), Expect = 4e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 448 ctttgggatttagaaactggataactacatcatccttaaagatattgacctcttcaatag 389 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatctgtag 585 ||||||||| ||||| |||| ||| |||||||| ||||| ||||||||||||||||| | Sbjct: 388 cagggatggcattcacccctattctcttcagggtgctctgaagccttttgtcatctgtgg 329 Query: 586 ttgt 589 |||| Sbjct: 328 ttgt 325
>gb|DQ205662.1| Glycine falcata BTF3-like protein 1 gene, partial sequence Length = 1234 Score = 127 bits (64), Expect = 4e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 455 ctttgggatttagaaactggataactacatcatccttaaagatattgacctcttcaatag 396 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatctgtag 585 ||||||||| ||||| |||| ||| |||||||| ||||| ||||||||||||||||| | Sbjct: 395 cagggatggcattcacccctattctcttcagggtgctctgaagccttttgtcatctgtgg 336 Query: 586 ttgt 589 |||| Sbjct: 335 ttgt 332
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 125 bits (63), Expect = 2e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| |||||| |||| || ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 539729 cttttggattctgaaattggataaccacatcatccttgaagatattgacctcttcgatac 539788 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatc 580 |||| ||| ||||||||||||||||||||| ||| || || ||||| |||||||| Sbjct: 539789 caggaatgttgttcactcctactcttttcaaggtgctttgaagcctcttgtcatc 539843 Score = 87.7 bits (44), Expect = 4e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 195 ttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcatcatcg 254 ||||| ||||| ||||| || || |||||||||||||||||||||||||||||||| ||| Sbjct: 538986 ttctcctctgcagcctcctcgaacgtctctccagggacaagctcagggacatcatcgtcg 539045 Query: 255 tcgtcagcctgagcagcacctgcactggcaccagcctc 292 |||| ||||||| |||||| |||||||||||||| Sbjct: 539046 tcgt---cctgagcgttacctgcgctggcaccagcctc 539080 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 494 atcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactctttt 553 ||||||||| |||||||||||||| ||||| | ||||||||||| || |||||||| || Sbjct: 35518858 atcatccttgaagatgttgacctcctcgatcgcggggatggtgttgacacctactctctt 35518799 Query: 554 cagggtactctggagccttttgtc 577 || || ||||| ||||| ||||| Sbjct: 35518798 gagcgtgctctgcagcctcttgtc 35518775 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 315 acctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcagg 367 |||||||| ||||| ||||| |||||||||| ||||||||||| ||| ||||| Sbjct: 539091 acctgcttctggaactgctcagcaagcctcctgaggttgtccaggttatcagg 539143 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 409 tctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcact 467 |||| |||||||| |||||||| || ||||||||||| || ||||| || ||||||||| Sbjct: 539581 tcttcgtctgtggtgttccactcactacccatgtatttgcaccaatggatgcttgcact 539639 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Minus Query: 409 tctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcact 467 |||| |||||||| | ||||||||||||||||| || ||| | || |||||||||||| Sbjct: 35519040 tcttggtctgtggggagccactgaccacccatgtgtttgcggcgatggaagcttgcact 35518982 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 220 tctctccagggacaagctcagggacatcatcatcgt 255 ||||||| || |||||||| || ||||||||||||| Sbjct: 35520080 tctctcccggaacaagctctggaacatcatcatcgt 35520045
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 125 bits (63), Expect = 2e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| |||||| |||| || ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 539727 cttttggattctgaaattggataaccacatcatccttgaagatattgacctcttcgatac 539786 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatc 580 |||| ||| ||||||||||||||||||||| ||| || || ||||| |||||||| Sbjct: 539787 caggaatgttgttcactcctactcttttcaaggtgctttgaagcctcttgtcatc 539841 Score = 87.7 bits (44), Expect = 4e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 195 ttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcatcatcg 254 ||||| ||||| ||||| || || |||||||||||||||||||||||||||||||| ||| Sbjct: 538984 ttctcctctgcagcctcctcgaacgtctctccagggacaagctcagggacatcatcgtcg 539043 Query: 255 tcgtcagcctgagcagcacctgcactggcaccagcctc 292 |||| ||||||| |||||| |||||||||||||| Sbjct: 539044 tcgt---cctgagcgttacctgcgctggcaccagcctc 539078 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 494 atcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactctttt 553 ||||||||| |||||||||||||| ||||| | ||||||||||| || |||||||| || Sbjct: 35608930 atcatccttgaagatgttgacctcctcgatcgcggggatggtgttgacacctactctctt 35608871 Query: 554 cagggtactctggagccttttgtc 577 || || ||||| ||||| ||||| Sbjct: 35608870 gagcgtgctctgcagcctcttgtc 35608847 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 315 acctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcagg 367 |||||||| ||||| ||||| |||||||||| ||||||||||| ||| ||||| Sbjct: 539089 acctgcttctggaactgctcagcaagcctcctgaggttgtccaggttatcagg 539141 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 409 tctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcact 467 |||| |||||||| |||||||| || ||||||||||| || ||||| || ||||||||| Sbjct: 539579 tcttcgtctgtggtgttccactcactacccatgtatttgcaccaatggatgcttgcact 539637 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Minus Query: 409 tctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcact 467 |||| |||||||| | ||||||||||||||||| || ||| | || |||||||||||| Sbjct: 35609112 tcttggtctgtggggagccactgaccacccatgtgtttgcggcgatggaagcttgcact 35609054 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 220 tctctccagggacaagctcagggacatcatcatcgt 255 ||||||| || |||||||| || ||||||||||||| Sbjct: 35610152 tctctcccggaacaagctctggaacatcatcatcgt 35610117
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 125 bits (63), Expect = 2e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| |||||| |||| || ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 76189 cttttggattctgaaattggataaccacatcatccttgaagatattgacctcttcgatac 76130 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatc 580 |||| ||| ||||||||||||||||||||| ||| || || ||||| |||||||| Sbjct: 76129 caggaatgttgttcactcctactcttttcaaggtgctttgaagcctcttgtcatc 76075 Score = 87.7 bits (44), Expect = 4e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 195 ttctcttctgcggcctcttcaaatgtctctccagggacaagctcagggacatcatcatcg 254 ||||| ||||| ||||| || || |||||||||||||||||||||||||||||||| ||| Sbjct: 76932 ttctcctctgcagcctcctcgaacgtctctccagggacaagctcagggacatcatcgtcg 76873 Query: 255 tcgtcagcctgagcagcacctgcactggcaccagcctc 292 |||| ||||||| |||||| |||||||||||||| Sbjct: 76872 tcgt---cctgagcgttacctgcgctggcaccagcctc 76838 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 315 acctgcttttggaattgctctgcaagcctccggaggttgtccaagttgtcagg 367 |||||||| ||||| ||||| |||||||||| ||||||||||| ||| ||||| Sbjct: 76827 acctgcttctggaactgctcagcaagcctcctgaggttgtccaggttatcagg 76775 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 409 tctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcact 467 |||| |||||||| |||||||| || ||||||||||| || ||||| || ||||||||| Sbjct: 76337 tcttcgtctgtggtgttccactcactacccatgtatttgcaccaatggatgcttgcact 76279
>gb|AY651062.1| Musa acuminata BTF3b-like transcription factor mRNA, complete cds Length = 646 Score = 121 bits (61), Expect = 3e-24 Identities = 178/217 (82%) Strand = Plus / Minus Query: 372 agttgattgataattgatggcagcagatcttgcagtttctttgtctgtggagttccactg 431 ||||| ||||| |||| || |||| |||||| ||||| || ||||| |||| || ||| Sbjct: 398 agttggttgatgattgcaggtagcaaatcttgaagttttttagtctggggagaaccgctg 339 Query: 432 accacccatgtattagcgccaattgaagcttgcactttaggattcagaaactgaataacc 491 || ||||||||||| || ||||||||||||||||||| ||||| ||||||| || || Sbjct: 338 acaacccatgtattggctgcaattgaagcttgcacttttggattaggaaactggatgaca 279 Query: 492 acatcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactctt 551 | ||||| ||||| || ||||| ||||| ||| ||||||| |||||||| || | |||| Sbjct: 278 atgtcatctttaaaaatattgacttcttctatagcagggatagtgttcaccccaattctt 219 Query: 552 ttcagggtactctggagccttttgtcatctgtagttg 588 ||||| || || || |||||||||||||||||||||| Sbjct: 218 ttcagagtgctttgaagccttttgtcatctgtagttg 182 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 201 tctgcggcctcttcaaatgtctctccagggacaagctcagggacatcatcatc 253 ||||| ||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 542 tctgcagcctcttcaaatgtctctccaggcaccagctctgggacatcatcatc 490
>gb|DQ205678.1| Glycine microphylla BTF3-like protein 1 gene, partial sequence Length = 1225 Score = 119 bits (60), Expect = 1e-23 Identities = 108/124 (87%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| ||||||||||| ||| Sbjct: 464 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcttcaatag 405 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatctgtag 585 ||||||||| ||||| |||| ||| |||||||| ||||| ||||||||||||||||| | Sbjct: 404 cagggatggcattcacccctattctcttcagggtgctctgaagccttttgtcatctgtgg 345 Query: 586 ttgt 589 |||| Sbjct: 344 ttgt 341
>gb|DQ205667.1| Amphicarpaea bracteata BTF3-like protein gene, partial sequence Length = 1065 Score = 119 bits (60), Expect = 1e-23 Identities = 108/124 (87%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 426 ctttgggatttagaaactggataaccacatcatccttaaagatattgacctcctcaattg 367 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatctgtag 585 ||||||||| ||||| |||| ||| |||||||| ||||| ||||||||||||||||| | Sbjct: 366 cagggatggcattcacccctattctcttcagggtgctctgaagccttttgtcatctgtgg 307 Query: 586 ttgt 589 |||| Sbjct: 306 ttgt 303
>ref|XM_470416.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 103 bits (52), Expect = 6e-19 Identities = 148/180 (82%) Strand = Plus / Minus Query: 398 atcttgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattga 457 |||||| || ||||| |||||||| | ||||||||||||||||| || ||| | || || Sbjct: 381 atcttgaagcttcttggtctgtggggagccactgaccacccatgtgtttgcggcgatgga 322 Query: 458 agcttgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctc 517 |||||||||||| ||||| | ||||| || || | ||||||||| |||||||||||||| Sbjct: 321 agcttgcactttgggattgacgaactggatgacgagatcatccttgaagatgttgacctc 262 Query: 518 ttcgataccagggatggtgttcactcctactcttttcagggtactctggagccttttgtc 577 ||||| | ||||||||||| || |||||||| || || || ||||| ||||| ||||| Sbjct: 261 ctcgatcgcggggatggtgttgacacctactctcttgagcgtgctctgcagcctcttgtc 202 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 220 tctctccagggacaagctcagggacatcatcatcgt 255 ||||||| || |||||||| || ||||||||||||| Sbjct: 538 tctctcccggaacaagctctggaacatcatcatcgt 503
>gb|DQ205676.1| Glycine canescens BTF3-like protein 2B gene, partial sequence Length = 741 Score = 103 bits (52), Expect = 6e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| |||||||| |||||| Sbjct: 112 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcgatag 53 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtc 577 ||||||||| ||||| |||| ||| |||||||| ||||| ||||||||||| Sbjct: 52 cagggatggcattcacccctattctcttcagggtgctctgaagccttttgtc 1
>gb|DQ205669.1| Glycine soja BTF3-like protein 2B gene, partial sequence Length = 1065 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| |||||||| || ||| Sbjct: 455 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaatag 396 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatctgtag 585 | ||||||| ||||| |||| ||| |||||||| ||||| ||||||||||||||||| | Sbjct: 395 ccgggatggcattcacccctattctcttcagggtgctctgaagccttttgtcatctgtgg 336 Query: 586 ttgt 589 |||| Sbjct: 335 ttgt 332
>dbj|AK104157.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-C10, full insert sequence Length = 903 Score = 103 bits (52), Expect = 6e-19 Identities = 148/180 (82%) Strand = Plus / Minus Query: 398 atcttgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattga 457 |||||| || ||||| |||||||| | ||||||||||||||||| || ||| | || || Sbjct: 358 atcttgaagcttcttggtctgtggggagccactgaccacccatgtgtttgcggcgatgga 299 Query: 458 agcttgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctc 517 |||||||||||| ||||| | ||||| || || | ||||||||| |||||||||||||| Sbjct: 298 agcttgcactttgggattgacgaactggatgacgagatcatccttgaagatgttgacctc 239 Query: 518 ttcgataccagggatggtgttcactcctactcttttcagggtactctggagccttttgtc 577 ||||| | ||||||||||| || |||||||| || || || ||||| ||||| ||||| Sbjct: 238 ctcgatcgcggggatggtgttgacacctactctcttgagcgtgctctgcagcctcttgtc 179 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 220 tctctccagggacaagctcagggacatcatcatcgt 255 ||||||| || |||||||| || ||||||||||||| Sbjct: 515 tctctcccggaacaagctctggaacatcatcatcgt 480
>dbj|AK102202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087F19, full insert sequence Length = 804 Score = 103 bits (52), Expect = 6e-19 Identities = 148/180 (82%) Strand = Plus / Minus Query: 398 atcttgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattga 457 |||||| || ||||| |||||||| | ||||||||||||||||| || ||| | || || Sbjct: 374 atcttgaagcttcttggtctgtggggagccactgaccacccatgtgtttgcggcgatgga 315 Query: 458 agcttgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctc 517 |||||||||||| ||||| | ||||| || || | ||||||||| |||||||||||||| Sbjct: 314 agcttgcactttgggattgacgaactggatgacgagatcatccttgaagatgttgacctc 255 Query: 518 ttcgataccagggatggtgttcactcctactcttttcagggtactctggagccttttgtc 577 ||||| | ||||||||||| || |||||||| || || || ||||| ||||| ||||| Sbjct: 254 ctcgatcgcggggatggtgttgacacctactctcttgagcgtgctctgcagcctcttgtc 195 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 220 tctctccagggacaagctcagggacatcatcatcgt 255 ||||||| || |||||||| || ||||||||||||| Sbjct: 531 tctctcccggaacaagctctggaacatcatcatcgt 496
>dbj|AK060496.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F11, full insert sequence Length = 944 Score = 103 bits (52), Expect = 6e-19 Identities = 148/180 (82%) Strand = Plus / Minus Query: 398 atcttgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattga 457 |||||| || ||||| |||||||| | ||||||||||||||||| || ||| | || || Sbjct: 399 atcttgaagcttcttggtctgtggggagccactgaccacccatgtgtttgcggcgatgga 340 Query: 458 agcttgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctc 517 |||||||||||| ||||| | ||||| || || | ||||||||| |||||||||||||| Sbjct: 339 agcttgcactttgggattgacgaactggatgacgagatcatccttgaagatgttgacctc 280 Query: 518 ttcgataccagggatggtgttcactcctactcttttcagggtactctggagccttttgtc 577 ||||| | ||||||||||| || |||||||| || || || ||||| ||||| ||||| Sbjct: 279 ctcgatcgcggggatggtgttgacacctactctcttgagcgtgctctgcagcctcttgtc 220 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 220 tctctccagggacaagctcagggacatcatcatcgt 255 ||||||| || |||||||| || ||||||||||||| Sbjct: 556 tctctcccggaacaagctctggaacatcatcatcgt 521
>ref|NM_105982.1| Arabidopsis thaliana unknown protein AT1G73230 mRNA, complete cds Length = 819 Score = 99.6 bits (50), Expect = 1e-17 Identities = 208/258 (80%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 324 tggaattgctctgcaagcctccggaggttgtccaagttgtcaggaccaagttgattgata 383 |||||||||||||| ||| || |||||||||||||| || || |||||||| ||||| Sbjct: 482 tggaattgctctgctagcttcttcaggttgtccaagttatctggtccaagttggctgata 423 Query: 384 at-tgatggcagcagatcttgcagtttctttgtctgtggagttccactgaccacccatgt 442 || ||| || || | ||||||| ||| || |||||||| || ||||| || |||||||| Sbjct: 422 atctga-ggaagaatgtcttgcaattttttcgtctgtggtgtaccactcacaacccatgt 364 Query: 443 attagcgccaattgaagcttgcactttaggattcagaaactgaataaccacatcatcctt 502 ||||| ||||||||||||| |||||||| || | |||||||| || ||||||||||| Sbjct: 363 gttagcagcaattgaagcttgaactttagggttaatgaactgaatgactacatcatcctt 304 Query: 503 aaagatgttgacctcttcgataccagggatggtgttcactcctactcttttcagggtact 562 ||| ||||| || ||||| || | || |||| || ||||| ||||| || || || || Sbjct: 303 aaaaatgttaacttcttcaatggcgggaatggaattgactccaactctcttaagagtgct 244 Query: 563 ctggagccttttgtcatc 580 ||||||||| |||||||| Sbjct: 243 ctggagcctcttgtcatc 226
>gb|AY063069.1| Arabidopsis thaliana putative RNA polymerase B transcription factor 3 (At1g73230) mRNA, complete cds Length = 529 Score = 99.6 bits (50), Expect = 1e-17 Identities = 208/258 (80%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 324 tggaattgctctgcaagcctccggaggttgtccaagttgtcaggaccaagttgattgata 383 |||||||||||||| ||| || |||||||||||||| || || |||||||| ||||| Sbjct: 359 tggaattgctctgctagcttcttcaggttgtccaagttatctggtccaagttggctgata 300 Query: 384 at-tgatggcagcagatcttgcagtttctttgtctgtggagttccactgaccacccatgt 442 || ||| || || | ||||||| ||| || |||||||| || ||||| || |||||||| Sbjct: 299 atctga-ggaagaatgtcttgcaattttttcgtctgtggtgtaccactcacaacccatgt 241 Query: 443 attagcgccaattgaagcttgcactttaggattcagaaactgaataaccacatcatcctt 502 ||||| ||||||||||||| |||||||| || | |||||||| || ||||||||||| Sbjct: 240 gttagcagcaattgaagcttgaactttagggttaatgaactgaatgactacatcatcctt 181 Query: 503 aaagatgttgacctcttcgataccagggatggtgttcactcctactcttttcagggtact 562 ||| ||||| || ||||| || | || |||| || ||||| ||||| || || || || Sbjct: 180 aaaaatgttaacttcttcaatggcgggaatggaattgactccaactctcttaagagtgct 121 Query: 563 ctggagccttttgtcatc 580 ||||||||| |||||||| Sbjct: 120 ctggagcctcttgtcatc 103
>gb|AF370253.1| Arabidopsis thaliana putative RNA polymerase B transcription factor BTF3 (At1g73230) mRNA, complete cds Length = 875 Score = 99.6 bits (50), Expect = 1e-17 Identities = 208/258 (80%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 324 tggaattgctctgcaagcctccggaggttgtccaagttgtcaggaccaagttgattgata 383 |||||||||||||| ||| || |||||||||||||| || || |||||||| ||||| Sbjct: 445 tggaattgctctgctagcttcttcaggttgtccaagttatctggtccaagttggctgata 386 Query: 384 at-tgatggcagcagatcttgcagtttctttgtctgtggagttccactgaccacccatgt 442 || ||| || || | ||||||| ||| || |||||||| || ||||| || |||||||| Sbjct: 385 atctga-ggaagaatgtcttgcaattttttcgtctgtggtgtaccactcacaacccatgt 327 Query: 443 attagcgccaattgaagcttgcactttaggattcagaaactgaataaccacatcatcctt 502 ||||| ||||||||||||| |||||||| || | |||||||| || ||||||||||| Sbjct: 326 gttagcagcaattgaagcttgaactttagggttaatgaactgaatgactacatcatcctt 267 Query: 503 aaagatgttgacctcttcgataccagggatggtgttcactcctactcttttcagggtact 562 ||| ||||| || ||||| || | || |||| || ||||| ||||| || || || || Sbjct: 266 aaaaatgttaacttcttcaatggcgggaatggaattgactccaactctcttaagagtgct 207 Query: 563 ctggagccttttgtcatc 580 ||||||||| |||||||| Sbjct: 206 ctggagcctcttgtcatc 189
>gb|AY084841.1| Arabidopsis thaliana clone 119220 mRNA, complete sequence Length = 819 Score = 99.6 bits (50), Expect = 1e-17 Identities = 208/258 (80%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 324 tggaattgctctgcaagcctccggaggttgtccaagttgtcaggaccaagttgattgata 383 |||||||||||||| ||| || |||||||||||||| || || |||||||| ||||| Sbjct: 482 tggaattgctctgctagcttcttcaggttgtccaagttatctggtccaagttggctgata 423 Query: 384 at-tgatggcagcagatcttgcagtttctttgtctgtggagttccactgaccacccatgt 442 || ||| || || | ||||||| ||| || |||||||| || ||||| || |||||||| Sbjct: 422 atctga-ggaagaatgtcttgcaattttttcgtctgtggtgtaccactcacaacccatgt 364 Query: 443 attagcgccaattgaagcttgcactttaggattcagaaactgaataaccacatcatcctt 502 ||||| ||||||||||||| |||||||| || | |||||||| || ||||||||||| Sbjct: 363 gttagcagcaattgaagcttgaactttagggttaatgaactgaatgactacatcatcctt 304 Query: 503 aaagatgttgacctcttcgataccagggatggtgttcactcctactcttttcagggtact 562 ||| ||||| || ||||| || | || |||| || ||||| ||||| || || || || Sbjct: 303 aaaaatgttaacttcttcaatggcgggaatggaattgactccaactctcttaagagtgct 244 Query: 563 ctggagccttttgtcatc 580 ||||||||| |||||||| Sbjct: 243 ctggagcctcttgtcatc 226
>gb|DQ205677.1| Teramnus labialis BTF3-like protein 2 gene, partial sequence Length = 916 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 114 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaattg 55 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtca 578 ||||||||| |||||||||| ||| |||||||| ||||| |||||||||||| Sbjct: 54 cagggatggcattcactcctattctcttcagggtgctctgaagccttttgtca 2
>gb|DQ205675.1| Glycine canescens BTF3-like protein 1 gene, partial sequence Length = 892 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| ||||||||||||||||| || |||||||| ||| Sbjct: 112 ctttgggatttagaaactggataactacatcatccttaaagatattaacctcttcaatag 53 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtc 577 ||||||||| ||||| |||| ||| || ||||| ||||| ||||||||||| Sbjct: 52 cagggatggcattcacccctattctctttagggtgctctgaagccttttgtc 1
>gb|DQ205674.1| Glycine canescens BTF3-like protein 2A gene, partial sequence Length = 948 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| |||||||| |||||| Sbjct: 112 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcgatag 53 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtc 577 ||||||||| ||||| |||| ||| || ||||| ||||| ||||||||||| Sbjct: 52 cagggatggcattcacccctattctcttaagggtgctctgaagccttttgtc 1
>gb|DQ205673.1| Pseudovigna argentea BTF3-like protein gene, partial sequence Length = 709 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 114 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaattg 55 Query: 526 cagggatggtgttcactcctactcttttcagggtactctggagccttttgtca 578 ||||||||| ||||| |||| ||| |||||||| ||||| |||||||||||| Sbjct: 54 cagggatggcattcacccctattctcttcagggtgctctgaagccttttgtca 2
>gb|BT016308.1| Zea mays clone Contig141 mRNA sequence Length = 783 Score = 87.7 bits (44), Expect = 4e-14 Identities = 116/140 (82%) Strand = Plus / Minus Query: 411 tttgtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcacttta 470 ||||||||||||| |||||||||||||||||| || || | || |||||||||||||| Sbjct: 301 tttgtctgtggagatccactgaccacccatgtgtttgctgcgatggaagcttgcactttg 242 Query: 471 ggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgataccaggg 530 || |||| ||||| || || | ||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 241 gggttcaagaactggatgacgagatcgtccttgaatatgttcacctcctcgattgcaggg 182 Query: 531 atggtgttcactcctactct 550 |||||||| || |||||||| Sbjct: 181 atggtgttgacccctactct 162 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 210 tcttcaaatgtctctccagggacaagctcagggacatcatcatcgt 255 |||||||| ||||||||||| |||||||| || ||||| ||||||| Sbjct: 481 tcttcaaaagtctctccaggaacaagctctggaacatcgtcatcgt 436
>gb|AY084522.1| Arabidopsis thaliana clone 1105 mRNA, complete sequence Length = 604 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Minus Query: 398 atcttgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattga 457 |||||||| ||| || ||||| |||| || || || |||||||| || || ||||||| Sbjct: 373 atcttgcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattga 314 Query: 458 agcttgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctc 517 |||||| || ||||| || | ||||||||||| |||||||||||||||||||| || || Sbjct: 313 agcttgaaccttagggttgatgaactgaataacaacatcatccttaaagatgttaacttc 254 Query: 518 ttcgataccagggatggtgttcactcctactcttttcagggtactctggagccttttgtc 577 ||| ||| | || |||| ||| ||||| | ||| || || || ||||||||||| ||||| Sbjct: 253 ttcaatagcgggaatggagttaactccaattctcttaagtgtgctctggagcctcttgtc 194 Query: 578 atc 580 ||| Sbjct: 193 atc 191
>emb|AJ242970.1|ATH242970 Arabidopsis thaliana mRNA for BTF3b-like factor Length = 630 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Minus Query: 398 atcttgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattga 457 |||||||| ||| || ||||| |||| || || || |||||||| || || ||||||| Sbjct: 339 atcttgcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattga 280 Query: 458 agcttgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctc 517 |||||| || ||||| || | ||||||||||| |||||||||||||||||||| || || Sbjct: 279 agcttgaaccttagggttgatgaactgaataacaacatcatccttaaagatgttaacttc 220 Query: 518 ttcgataccagggatggtgttcactcctactcttttcagggtactctggagccttttgtc 577 ||| ||| | || |||| ||| ||||| | ||| || || || ||||||||||| ||||| Sbjct: 219 ttcaatagcgggaatggagttaactccaattctcttaagtgtgctctggagcctcttgtc 160 Query: 578 atc 580 ||| Sbjct: 159 atc 157
>gb|DQ241859.1| Solanum tuberosum clone 021D03 putative transcription factor BTF3-like mRNA, complete cds Length = 676 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Minus Query: 402 tgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagct 461 |||| |||||||||||| ||||| ||||| || |||||||| || || ||||||| ||| Sbjct: 310 tgcaatttctttgtctggggagtaccactaacaacccatgtgtttgcagcaattgatgct 251 Query: 462 tgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcg 521 || ||||| || || | || || ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 250 tgaactttggggttaacgaattggataacaacatcctccttgaagatgttgacttcttca 191 Query: 522 ataccagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatc 580 ||| |||| |||| || || |||| |||||||| ||| ||||| || ||||||||||| Sbjct: 190 atagcaggaatggcattgacacctattcttttcaaggtgctctgtagtcttttgtcatc 132
>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence Length = 116616 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 480 aactgaataaccacatcatccttaaagatgttgacctcttcgataccagggatggtgttc 539 ||||| ||||| ||||||||||| ||||| |||||||| || || ||||||| ||| Sbjct: 85048 aactggataactacatcatccttgaagatattgacctcctcaatttgtgggatggcattc 84989 Query: 540 actcctactcttttcagggtactctggagccttttgtcatctgtagttgt 589 || |||| ||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 84988 acccctattctcttcagggtgctctgaagccttttgtcatctgtagttgt 84939 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 213 tcaaatgtctctccagggacaagctcagggacatcatcatc 253 ||||| |||||||| |||||||| || || ||||||||||| Sbjct: 85796 tcaaaagtctctcctgggacaagatctggaacatcatcatc 85756
>emb|AJ580824.1|LCO580824 Lotus corniculatus var. japonicus har1 gene and genes for transcription factor homolog BTF3-like protein, S-receptor kinase-like protein 1, S-receptor kinase-like protein 2, S-receptor kinase-like protein 3 and SAR DNA-binding protein-like protein Length = 46304 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 477 agaaactgaataaccacatcatccttaaagatgttgacctcttcgataccagggatggtg 536 |||||||| ||||| ||||||||||| |||||||||||||| || || | ||||||| Sbjct: 6710 agaaactggataactacatcatccttgaagatgttgacctcctcaattgcggggatggca 6651 Query: 537 ttcactcctactcttttcagggtactctggagccttttgtcatctgtagttgt 589 ||||| |||| ||| |||||||| ||||| |||||||| ||||| || ||||| Sbjct: 6650 ttcacccctattctcttcagggtgctctgtagccttttatcatcggtggttgt 6598
>gb|AY105061.1| Zea mays PCO096106 mRNA sequence Length = 902 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 414 gtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcactttagga 473 |||||||||| |||||||||||||||||| || || | || |||||||||||||| || Sbjct: 416 gtctgtggagatccactgaccacccatgtgtttgctgcgatggaagcttgcactttgggg 357 Query: 474 ttcagaaactgaataaccacatcatccttaaagatgttgacctcttcgataccagggatg 533 |||| ||||| || || | ||| ||||| || ||||| ||||| ||||| |||||||| Sbjct: 356 ttcaagaactggatgacgagatcgtccttgaatatgttcacctcctcgattgcagggatg 297 Query: 534 gtgttcactcctactct 550 ||||| || |||||||| Sbjct: 296 gtgttgacccctactct 280 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 210 tcttcaaatgtctctccagggacaagctcagggacatcatcatcgt 255 |||||||| ||||||||||| |||||||| || ||||| ||||||| Sbjct: 599 tcttcaaaagtctctccaggaacaagctctggaacatcgtcatcgt 554
>dbj|AP005667.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09E01, TM0258c, complete sequence Length = 38809 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 477 agaaactgaataaccacatcatccttaaagatgttgacctcttcgataccagggatggtg 536 |||||||| ||||| ||||||||||| |||||||||||||| || || | ||||||| Sbjct: 8496 agaaactggataactacatcatccttgaagatgttgacctcctcaattgcggggatggca 8437 Query: 537 ttcactcctactcttttcagggtactctggagccttttgtcatctgtagttgt 589 ||||| |||| ||| |||||||| ||||| |||||||| ||||| || ||||| Sbjct: 8436 ttcacccctattctcttcagggtgctctgtagccttttatcatcggtggttgt 8384
>dbj|AB092809.1| Lotus japonicus HAR1 gene for LRR receptor-like kinase, hypothetical proteins, complete and partial cds, clone:BAC259.12D-2 Length = 39462 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 477 agaaactgaataaccacatcatccttaaagatgttgacctcttcgataccagggatggtg 536 |||||||| ||||| ||||||||||| |||||||||||||| || || | ||||||| Sbjct: 8397 agaaactggataactacatcatccttgaagatgttgacctcctcaattgcggggatggca 8338 Query: 537 ttcactcctactcttttcagggtactctggagccttttgtcatctgtagttgt 589 ||||| |||| ||| |||||||| ||||| |||||||| ||||| || ||||| Sbjct: 8337 ttcacccctattctcttcagggtgctctgtagccttttatcatcggtggttgt 8285
>gb|DQ205671.1| Glycine soja clone 16 BTF3-like protein 2A gene, partial sequence Length = 868 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| ||||||||||| ||| Sbjct: 72 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcttcaatag 13 Query: 526 cagggatgg 534 ||||||||| Sbjct: 12 cagggatgg 4
>gb|DQ205672.1| Teramnus uncinatus BTF3-like protein gene, partial sequence Length = 898 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 100 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaattg 41 Query: 526 cagggatggtgttcactcctactcttttcagggtactctg 565 ||||||||| ||||| |||| ||| |||||||| ||||| Sbjct: 40 cagggatggcattcacccctattctcttcagggtgctctg 1
>ref|NM_101651.2| Arabidopsis thaliana transcription factor AT1G17880 mRNA, complete cds Length = 731 Score = 69.9 bits (35), Expect = 9e-09 Identities = 101/123 (82%) Strand = Plus / Minus Query: 398 atcttgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattga 457 |||||||| ||| || ||||| |||| || || || |||||||| || || ||||||| Sbjct: 373 atcttgcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattga 314 Query: 458 agcttgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctc 517 |||||| || ||||| || | ||||||||||| |||||||||||||||||||| || || Sbjct: 313 agcttgaaccttagggttgatgaactgaataacaacatcatccttaaagatgttaacttc 254 Query: 518 ttc 520 ||| Sbjct: 253 ttc 251
>gb|AF332407.1| Arabidopsis thaliana putative transcription factor (At1g17880) mRNA, complete cds Length = 498 Score = 69.9 bits (35), Expect = 9e-09 Identities = 101/123 (82%) Strand = Plus / Minus Query: 398 atcttgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattga 457 |||||||| ||| || ||||| |||| || || || |||||||| || || ||||||| Sbjct: 285 atcttgcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattga 226 Query: 458 agcttgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctc 517 |||||| || ||||| || | ||||||||||| |||||||||||||||||||| || || Sbjct: 225 agcttgaaccttagggttgatgaactgaataacaacatcatccttaaagatgttaacttc 166 Query: 518 ttc 520 ||| Sbjct: 165 ttc 163
>gb|AY079361.1| Arabidopsis thaliana putative transcription factor (At1g17880) mRNA, complete cds Length = 529 Score = 69.9 bits (35), Expect = 9e-09 Identities = 101/123 (82%) Strand = Plus / Minus Query: 398 atcttgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattga 457 |||||||| ||| || ||||| |||| || || || |||||||| || || ||||||| Sbjct: 285 atcttgcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattga 226 Query: 458 agcttgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctc 517 |||||| || ||||| || | ||||||||||| |||||||||||||||||||| || || Sbjct: 225 agcttgaaccttagggttgatgaactgaataacaacatcatccttaaagatgttaacttc 166 Query: 518 ttc 520 ||| Sbjct: 165 ttc 163
>gb|AY045793.1| Arabidopsis thaliana putative transcription factor (At1g17880) mRNA, complete cds Length = 740 Score = 69.9 bits (35), Expect = 9e-09 Identities = 101/123 (82%) Strand = Plus / Minus Query: 398 atcttgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattga 457 |||||||| ||| || ||||| |||| || || || |||||||| || || ||||||| Sbjct: 371 atcttgcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattga 312 Query: 458 agcttgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctc 517 |||||| || ||||| || | ||||||||||| |||||||||||||||||||| || || Sbjct: 311 agcttgaaccttagggttgatgaactgaataacaacatcatccttaaagatgttaacttc 252 Query: 518 ttc 520 ||| Sbjct: 251 ttc 249
>gb|AY057667.1| Arabidopsis thaliana At1g17880/F2H15_10 mRNA, complete cds Length = 728 Score = 69.9 bits (35), Expect = 9e-09 Identities = 101/123 (82%) Strand = Plus / Minus Query: 398 atcttgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattga 457 |||||||| ||| || ||||| |||| || || || |||||||| || || ||||||| Sbjct: 373 atcttgcaattttttggtctgaggagaaccgctaacaacccatgtgtttgcagcaattga 314 Query: 458 agcttgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctc 517 |||||| || ||||| || | ||||||||||| |||||||||||||||||||| || || Sbjct: 313 agcttgaaccttagggttgatgaactgaataacaacatcatccttaaagatgttaacttc 254 Query: 518 ttc 520 ||| Sbjct: 253 ttc 251
>gb|DQ205665.1| Glycine cyrtoloba BTF3-like protein 2B gene, partial sequence Length = 652 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| |||||||| || ||| Sbjct: 72 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaatag 13 Query: 526 cagggatgg 534 ||||||||| Sbjct: 12 cagggatgg 4
>gb|DQ205661.1| Glycine microphylla BTF3-like protein 2B gene, partial sequence Length = 664 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| |||||||| || ||| Sbjct: 72 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaatag 13 Query: 526 cagggatgg 534 ||||||||| Sbjct: 12 cagggatgg 4
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 494 atcatccttaaagatgttgacctcttcgataccagggatggtgttcactcctactctttt 553 ||||||||| |||||||||||||| ||||| | ||||||||||| || |||||||| || Sbjct: 51821 atcatccttgaagatgttgacctcctcgatcgcggggatggtgttgacacctactctctt 51762 Query: 554 cagggtactctggagccttttgtc 577 || || ||||| ||||| ||||| Sbjct: 51761 gagcgtgctctgcagcctcttgtc 51738 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Minus Query: 409 tctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcact 467 |||| |||||||| | ||||||||||||||||| || ||| | || |||||||||||| Sbjct: 52003 tcttggtctgtggggagccactgaccacccatgtgtttgcggcgatggaagcttgcact 51945 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 220 tctctccagggacaagctcagggacatcatcatcgt 255 ||||||| || |||||||| || ||||||||||||| Sbjct: 53043 tctctcccggaacaagctctggaacatcatcatcgt 53008
>gb|DQ447646.1| Nicotiana benthamiana BTF3 mRNA, complete cds Length = 483 Score = 61.9 bits (31), Expect = 2e-06 Identities = 142/179 (79%) Strand = Plus / Minus Query: 402 tgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagct 461 |||| |||||||||||| || | ||||| || |||||||| || || |||| || ||| Sbjct: 281 tgcaatttctttgtctggggggaaccactaacaacccatgtgtttgcagcaatagatgct 222 Query: 462 tgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcg 521 || ||||| ||||| | || || ||||| ||||| ||||| || |||||||| ||||| Sbjct: 221 tgaactttgggattaatgaattggataacaacatcctccttgaaaatgttgacttcttca 162 Query: 522 ataccagggatggtgttcactcctactcttttcagggtactctggagccttttgtcatc 580 ||| |||| |||| || || |||| |||||||| ||| ||||| || ||||||||||| Sbjct: 161 atagcaggaatggcattgacacctattcttttcaaggtgctctgtagtcttttgtcatc 103
>gb|DQ205670.1| Glycine soja clone 2 BTF3-like protein 2A gene, partial sequence Length = 868 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| |||||||| || ||| Sbjct: 72 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaatag 13 Query: 526 cagggatgg 534 | ||||||| Sbjct: 12 ccgggatgg 4
>gb|DQ205668.1| Glycine soja BTF3-like protein 1 gene, partial sequence Length = 879 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| |||||||| || ||| Sbjct: 71 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctcctcaatag 12 Query: 526 cagggatgg 534 | ||||||| Sbjct: 11 ccgggatgg 3
>gb|DQ205663.1| Glycine falcata BTF3-like protein 2B gene, partial sequence Length = 702 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgatac 525 |||| ||||| |||||||| ||||| || |||||||||||||| ||||| || || ||| Sbjct: 72 ctttgggatttagaaactggataactacgtcatccttaaagatattgacttcctcaatag 13 Query: 526 cagggatgg 534 ||||||||| Sbjct: 12 cagggatgg 4
>gb|AC034106.4|F2H15 Sequence of BAC F2H15 from Arabidopsis thaliana chromosome 1, complete sequence Length = 75133 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 480 aactgaataaccacatcatccttaaagatgttgacctcttc 520 ||||||||||| |||||||||||||||||||| || ||||| Sbjct: 34145 aactgaataacaacatcatccttaaagatgttaacttcttc 34185
>gb|AF051234.1|AF051234 Picea mariana transcription factor BTF3 homolog (Sb48) mRNA, partial cds Length = 841 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 411 tttgtctgtggagttccactgaccacccatgtattagcgccaattgaagcttgcacttta 470 |||||||| || | ||||||||||||||||||||| || ||| || ||||| ||||| Sbjct: 174 tttgtctgaggcgatccactgaccacccatgtattggcctgaatagaggcttgaactttt 115 Query: 471 ggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcgataccaggg 530 || || | || ||||| |||| |||||||| || || || || ||||| ||| |||| Sbjct: 114 gggtttacgaaatgaatgaccatctcatccttgaaaatattcacttcttcaatagcagga 55 Query: 531 atggtgttcactcctactcttttcagggtactctggagccttttgtcatctgt 583 || | |||||||||| || |||| |||||| ||||| |||||||||||||| Sbjct: 54 atactattcactcctaacctcttcaaggtactttggagtcttttgtcatctgt 2
>gb|AC172859.1| Brassica rapa subsp. pekinensis clone KBrB023K01, complete sequence Length = 102061 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 480 aactgaataaccacatcatccttaaagatgttgacctcttc 520 ||||||||||| |||||||||||||||||||| || ||||| Sbjct: 95664 aactgaataacaacatcatccttaaagatgttaacttcttc 95704
>gb|DQ205666.1| Teramnus labialis BTF3-like protein 1 gene, partial sequence Length = 764 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 466 ctttaggattcagaaactgaataaccacatcatccttaaagatgttgacctc 517 |||| ||||| |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 58 ctttgggatttagaaactggataactacgtcatccttaaagatattgacctc 7
>gb|BT013353.1| Lycopersicon esculentum clone 135313R, mRNA sequence Length = 701 Score = 56.0 bits (28), Expect = 1e-04 Identities = 139/176 (78%) Strand = Plus / Minus Query: 402 tgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagct 461 |||| |||||||||||| ||||| ||||| || |||||||| || || ||||||| ||| Sbjct: 335 tgcaatttctttgtctggggagtaccactaacaacccatgtgtttgcagcaattgatgct 276 Query: 462 tgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcg 521 || ||||| || || | || || ||||| ||||| ||||| || |||||||| ||||| Sbjct: 275 tgaactttggggttaacgaattggataacaacatcctccttgaaaatgttgacttcttca 216 Query: 522 ataccagggatggtgttcactcctactcttttcagggtactctggagccttttgtc 577 || |||| ||| || || |||| |||||||| ||| ||||| || |||||||| Sbjct: 215 atggcaggaatgccattgacacctattcttttcaaggtgctctgtagtcttttgtc 160
>gb|DQ307490.1| Lycopersicon esculentum BTF3-like transcription factor (BTF3) mRNA, complete cds Length = 711 Score = 56.0 bits (28), Expect = 1e-04 Identities = 139/176 (78%) Strand = Plus / Minus Query: 402 tgcagtttctttgtctgtggagttccactgaccacccatgtattagcgccaattgaagct 461 |||| |||||||||||| ||||| ||||| || |||||||| || || ||||||| ||| Sbjct: 344 tgcaatttctttgtctggggagtaccactaacaacccatgtgtttgcagcaattgatgct 285 Query: 462 tgcactttaggattcagaaactgaataaccacatcatccttaaagatgttgacctcttcg 521 || ||||| || || | || || ||||| ||||| ||||| || |||||||| ||||| Sbjct: 284 tgaactttggggttaacgaattggataacaacatcctccttgaaaatgttgacttcttca 225 Query: 522 ataccagggatggtgttcactcctactcttttcagggtactctggagccttttgtc 577 || |||| ||| || || |||| |||||||| ||| ||||| || |||||||| Sbjct: 224 atggcaggaatgccattgacacctattcttttcaaggtgctctgtagtcttttgtc 169
>emb|Y09106.1|NPY09106 N.plumbaginifolia mRNA for BTF3-like transcription factor Length = 664 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 486 ataaccacatcatccttaaagatgttgacctcttcgataccagggatggtgttcactcct 545 ||||| ||||| |||||||| ||||| |||||||| ||| |||| || | ||||| ||| Sbjct: 235 ataactacatcctccttaaaaatgttaacctcttcaatagcaggaatagcattcacccct 176 Query: 546 actcttttcagggtactctggagccttttgtcatctgt 583 | |||||| ||||| || || || || ||||||||||| Sbjct: 175 attcttttgagggtgctttgaagtctcttgtcatctgt 138
>gb|AC010556.6|AC010556 Arabidopsis thaliana chromosome 1 BAC T18K17 genomic sequence, complete sequence Length = 70836 Score = 50.1 bits (25), Expect = 0.008 Identities = 82/101 (81%) Strand = Plus / Minus Query: 480 aactgaataaccacatcatccttaaagatgttgacctcttcgataccagggatggtgttc 539 |||||||| || |||||||||||||| ||||| || ||||| || | || |||| || Sbjct: 26631 aactgaatgactacatcatccttaaaaatgttaacttcttcaatggcgggaatggaattg 26572 Query: 540 actcctactcttttcagggtactctggagccttttgtcatc 580 ||||| ||||| || || || ||||||||||| |||||||| Sbjct: 26571 actccaactctcttaagagtgctctggagcctcttgtcatc 26531 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Minus Query: 414 gtctgtggagttccactgaccacccatgtattagcgccaattgaagcttg 463 |||||||| || ||||| || |||||||| ||||| ||||||||||||| Sbjct: 26796 gtctgtggtgtaccactcacaacccatgtgttagcagcaattgaagcttg 26747
>gb|AY439887.1| Armigeres subalbatus ASAP ID: 43879 transcription factor mRNA sequence Length = 1064 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 510 ttgacctcttcgataccagggatggtgttcac 541 ||||||||||| || ||||||||||||||||| Sbjct: 228 ttgacctcttcaattccagggatggtgttcac 197
>ref|XM_980983.1| PREDICTED: Mus musculus hypothetical protein LOC670377 (LOC670377), mRNA Length = 1740 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 266 agcagcacctgcactggcaccagc 289 |||||||||||||||||||||||| Sbjct: 577 agcagcacctgcactggcaccagc 600
>ref|XM_991216.1| PREDICTED: Mus musculus hypothetical protein LOC676574 (LOC676574), mRNA Length = 693 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 266 agcagcacctgcactggcaccagc 289 |||||||||||||||||||||||| Sbjct: 334 agcagcacctgcactggcaccagc 357
>ref|XM_979476.1| PREDICTED: Mus musculus hypothetical protein LOC665791 (LOC665791), mRNA Length = 585 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 266 agcagcacctgcactggcaccagc 289 |||||||||||||||||||||||| Sbjct: 334 agcagcacctgcactggcaccagc 357
>emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on chromosome 4, complete sequence Length = 175199 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 266 agcagcacctgcactggcaccagc 289 |||||||||||||||||||||||| Sbjct: 109193 agcagcacctgcactggcaccagc 109216
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 192 tttttctcttctgcggcctcttc 214 ||||||||||||||||||||||| Sbjct: 2988961 tttttctcttctgcggcctcttc 2988939
>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0024L18 Length = 150128 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 192 tttttctcttctgcggcctcttc 214 ||||||||||||||||||||||| Sbjct: 35016 tttttctcttctgcggcctcttc 34994
>gb|AC132100.3| Mus musculus BAC clone RP24-294D10 from chromosome 18, complete sequence Length = 173949 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 ctcttctgcctttttctcttct 203 |||||||||||||||||||||| Sbjct: 102445 ctcttctgcctttttctcttct 102424
>dbj|AK174131.1| Ciona intestinalis cDNA, clone:cibd005d17, full insert sequence Length = 1271 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 ctcttctgcctttttctcttct 203 |||||||||||||||||||||| Sbjct: 453 ctcttctgcctttttctcttct 432
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 caccagcctcgatgccagcggc 304 |||||||||||||||||||||| Sbjct: 1019295 caccagcctcgatgccagcggc 1019316
>emb|AL713875.14| Mouse DNA sequence from clone RP23-17N7 on chromosome 11, complete sequence Length = 201123 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 ctgcctttttctcttctgcctttttctctt 201 |||||||||||| |||||||| |||||||| Sbjct: 125673 ctgcctttttcttttctgcctctttctctt 125702
>gb|AF238378.5| Homo sapiens chromosome 8 clone SCb-561b17 map p23.1, complete sequence Length = 128544 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 acctgcactggcaccagcctc 292 ||||||||||||||||||||| Sbjct: 104691 acctgcactggcaccagcctc 104671
>gb|AC139376.3| Mus musculus BAC clone RP24-420A20 from chromosome 10, complete sequence Length = 184039 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 ctgcctttttctcttctgccttttt 196 |||||||||||||||||| |||||| Sbjct: 167920 ctgcctttttctcttctgtcttttt 167944
>gb|AC183677.2| Pan troglodytes BAC clone CH251-520E8 from chromosome 9, complete sequence Length = 174731 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 acctgcactggcaccagcctc 292 ||||||||||||||||||||| Sbjct: 156289 acctgcactggcaccagcctc 156269
>gb|AF228730.8| Homo sapiens chromosome 8 clones SCb-332a23, CTB-415D8 map p23.1, complete sequences Length = 295854 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 acctgcactggcaccagcctc 292 ||||||||||||||||||||| Sbjct: 40556 acctgcactggcaccagcctc 40536
>gb|AY149920.1| Homo sapiens activated T-cell marker CD109 (CD109) mRNA, complete cds Length = 4338 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 550 ttttcagggtactctggagccttttgtca 578 |||||||||||||||| ||||| |||||| Sbjct: 2635 ttttcagggtactctgtagcctattgtca 2607
>emb|AL590428.7| Human DNA sequence from clone RP11-553A21 on chromosome 6 Contains the 5' end of the SLC17A5 gene for solute carrier family 17 (anion/sugar transporter), member 5, the 5' end of the gene for CD109 (CD109) and three CpG islands, complete sequence Length = 163577 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 550 ttttcagggtactctggagccttttgtca 578 |||||||||||||||| ||||| |||||| Sbjct: 138752 ttttcagggtactctgtagcctattgtca 138724
>emb|AL157937.21| Human DNA sequence from clone RP11-408N14 on chromosome 9 Contains a novel gene, complete sequence Length = 153783 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 tttctcttctgcctttttctcttct 203 |||||||||| |||||||||||||| Sbjct: 77690 tttctcttcttcctttttctcttct 77714
>gb|AC183111.3| Pan troglodytes BAC clone CH251-294L3 from chromosome 9, complete sequence Length = 150130 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 acctgcactggcaccagcctc 292 ||||||||||||||||||||| Sbjct: 131689 acctgcactggcaccagcctc 131669
>gb|AC183110.3| Pan troglodytes BAC clone CH251-353M12 from chromosome 8, complete sequence Length = 165123 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 acctgcactggcaccagcctc 292 ||||||||||||||||||||| Sbjct: 27538 acctgcactggcaccagcctc 27558
>emb|AL834478.1|HSM805581 Homo sapiens mRNA; cDNA DKFZp762L1111 (from clone DKFZp762L1111) Length = 2938 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 550 ttttcagggtactctggagccttttgtca 578 |||||||||||||||| ||||| |||||| Sbjct: 862 ttttcagggtactctgtagcctattgtca 834
>ref|NM_133493.1| Homo sapiens CD109 molecule (CD109), mRNA Length = 5883 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 550 ttttcagggtactctggagccttttgtca 578 |||||||||||||||| ||||| |||||| Sbjct: 2747 ttttcagggtactctgtagcctattgtca 2719
>gb|AC182393.2| Pan troglodytes BAC clone CH251-503C15 from chromosome 9, complete sequence Length = 230693 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 acctgcactggcaccagcctc 292 ||||||||||||||||||||| Sbjct: 23729 acctgcactggcaccagcctc 23749
>dbj|AK123960.1| Homo sapiens cDNA FLJ41966 fis, clone PUAEN2009174 Length = 2843 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 550 ttttcagggtactctggagccttttgtca 578 |||||||||||||||| ||||| |||||| Sbjct: 844 ttttcagggtactctgtagcctattgtca 816
>gb|BC059452.1| Danio rerio Rho family GTPase 3a, mRNA (cDNA clone MGC:73080 IMAGE:4146568), complete cds Length = 2044 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 ttaggattcagaaactgaataacca 492 ||||||||||||||| ||||||||| Sbjct: 1645 ttaggattcagaaacagaataacca 1669
>ref|NM_199522.1| Danio rerio Rho family GTPase 3a (rnd3a), mRNA Length = 2044 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 ttaggattcagaaactgaataacca 492 ||||||||||||||| ||||||||| Sbjct: 1645 ttaggattcagaaacagaataacca 1669
>gb|AF410459.1| Homo sapiens CD109 (CD109) mRNA, complete cds Length = 5883 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 550 ttttcagggtactctggagccttttgtca 578 |||||||||||||||| ||||| |||||| Sbjct: 2747 ttttcagggtactctgtagcctattgtca 2719
>gb|AC016993.4|AC016993 Homo sapiens clone RP11-18J9, complete sequence Length = 172241 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 ctttttctcttctgcctttttctct 200 |||||| |||||||||||||||||| Sbjct: 15550 ctttttatcttctgcctttttctct 15574
>gb|DQ009621.1| Methanotorris igneus ribosomal protein L1 operon, complete sequence Length = 2320 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 177 tttttctcttctgcctttttctcttctgc 205 |||||||||||| | |||||||||||||| Sbjct: 2144 tttttctcttcttcttttttctcttctgc 2116 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 177 tttttctcttctgcctttttctcttctgc 205 |||||||||||| | |||||||||||||| Sbjct: 1686 tttttctcttcttcttttttctcttctgc 1658
>gb|AC019086.7| Homo sapiens BAC clone RP11-360H4 from 2, complete sequence Length = 199934 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 acctgcactggcaccagcctc 292 ||||||||||||||||||||| Sbjct: 135131 acctgcactggcaccagcctc 135151
>ref|XM_574265.1| PREDICTED: Rattus norvegicus mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (predicted) (Map3k7ip2_predicted), mRNA Length = 4059 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 gcagcacctgcactggcacca 287 ||||||||||||||||||||| Sbjct: 3112 gcagcacctgcactggcacca 3092
>gb|AC022471.8|AC022471 Genomic Sequence For Homo sapiens Clone 202M16 From Chromosome VI, complete sequence Length = 92144 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 tttctcttctgcctttttctcttct 203 |||||||||| |||||||||||||| Sbjct: 57497 tttctcttcttcctttttctcttct 57521
>gb|AC153862.8| Mus musculus 10 BAC RP23-353K11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223830 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 gcctttttctcttctgccttt 194 ||||||||||||||||||||| Sbjct: 200681 gcctttttctcttctgccttt 200701
>emb|BX641095.1|HSM806923 Homo sapiens mRNA; cDNA DKFZp686N23150 (from clone DKFZp686N23150) Length = 4237 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 550 ttttcagggtactctggagccttttgtca 578 |||||||||||||||| ||||| |||||| Sbjct: 2422 ttttcagggtactctgtagcctattgtca 2394
>gb|AC153891.6| Mus musculus 10 BAC RP23-415J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198332 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 gcctttttctcttctgccttt 194 ||||||||||||||||||||| Sbjct: 165330 gcctttttctcttctgccttt 165310
>gb|BC085788.1| Rattus norvegicus mitogen-activated protein kinase kinase kinase 7 interacting protein 2, mRNA (cDNA clone MGC:93764 IMAGE:7108689), complete cds Length = 4617 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 gcagcacctgcactggcacca 287 ||||||||||||||||||||| Sbjct: 4100 gcagcacctgcactggcacca 4080
>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete sequence Length = 223059 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 ctcttttcagggtactctgga 567 ||||||||||||||||||||| Sbjct: 18792 ctcttttcagggtactctgga 18812
>ref|NM_001012062.1| Rattus norvegicus mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (Map3k7ip2), mRNA Length = 4617 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 gcagcacctgcactggcacca 287 ||||||||||||||||||||| Sbjct: 4100 gcagcacctgcactggcacca 4080
>gb|AC139320.4| Mus musculus BAC clone RP24-410G8 from 9, complete sequence Length = 176888 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 cctttttctcttctgcctttt 195 ||||||||||||||||||||| Sbjct: 73636 cctttttctcttctgcctttt 73656
>gb|AC140228.3| Mus musculus BAC clone RP24-488C4 from 10, complete sequence Length = 137705 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 ttttctcttctgcctttttct 198 ||||||||||||||||||||| Sbjct: 73562 ttttctcttctgcctttttct 73582
>emb|AL773566.6| Mouse DNA sequence from clone RP23-181C9 on chromosome 2, complete sequence Length = 184254 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 175 cctttttctcttctgcctttttctc 199 |||||||||||||||||||| |||| Sbjct: 127295 cctttttctcttctgcctttctctc 127319
>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold Length = 1743090 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tttttctcttctgcctttttctct 200 |||||||||||||||| ||||||| Sbjct: 231042 tttttctcttctgcctatttctct 231065
>gb|DQ179647.1| Cynoscion arenarius gonadotropin-releasing hormone 3 gene, intron 2 Length = 245 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 cacgactctgcctttttctcttct 188 ||||||||||||||||| |||||| Sbjct: 133 cacgactctgcctttttttcttct 156
>gb|DQ179646.1| Cynoscion regalis gonadotropin-releasing hormone 3 gene, intron 2 Length = 239 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 cacgactctgcctttttctcttct 188 ||||||||||||||||| |||||| Sbjct: 128 cacgactctgcctttttttcttct 151
>ref|XM_454794.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E18744g predicted mRNA Length = 1593 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 ttttctcttctgcctttttctctt 201 ||||||||||||||| |||||||| Sbjct: 829 ttttctcttctgcctgtttctctt 806
>gb|AC162916.3| Mus musculus BAC clone RP23-395G18 from chromosome 1, complete sequence Length = 224904 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 tttctcttctgcctttttctcttc 202 |||||||||| ||||||||||||| Sbjct: 45954 tttctcttcttcctttttctcttc 45977
>gb|AC127411.3| Mus musculus BAC clone RP23-60E24 from chromosome 5, complete sequence Length = 217636 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gcctcttcaaatgtctctcc 226 |||||||||||||||||||| Sbjct: 13799 gcctcttcaaatgtctctcc 13780
>gb|AC122452.4| Mus musculus BAC clone RP24-255M5 from chromosome 16, complete sequence Length = 181463 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 cttcaaatgtctctccagggacaa 234 ||||||||||||| |||||||||| Sbjct: 134987 cttcaaatgtctccccagggacaa 135010
>gb|AC124715.4| Mus musculus BAC clone RP24-130P22 from chromosome 14, complete sequence Length = 178742 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 gccttttgtcatctgtagtt 587 |||||||||||||||||||| Sbjct: 160405 gccttttgtcatctgtagtt 160424
>gb|AC092383.4| Homo sapiens chromosome 16 clone RP11-787D11, complete sequence Length = 179677 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 tcacgactctgcctttttctcttc 187 ||||||||||||||||| |||||| Sbjct: 123678 tcacgactctgccttttactcttc 123655
>gb|AC110166.17| Mus musculus chromosome 16, clone RP23-80O10, complete sequence Length = 131042 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 cttcaaatgtctctccagggacaa 234 ||||||||||||| |||||||||| Sbjct: 68097 cttcaaatgtctccccagggacaa 68120
>emb|AL590666.8| Human DNA sequence from clone RP11-66D17 on chromosome 1 Contains the 3' end of the SH2D2A gene for SH2 domain protein 2A, the PRCC gene for papillary renal cell carcinoma (translocation-associated), the HDGF gene for hepatoma-derived growth factor (high-mobility group protein 1-like), the MRPL24 gene for mitochondrial ribosomal protein L24, the gene for CGI-41 protein (CGI-41), a novel gene (FLJ12671), a novel gene, the CRABP2 gene for cellular retinoic acid binding protein 2, a novel gene, the gene for NES nestin, the 5' end of a novel gene, the 3' end of the BCAN gene for brevican and 5 CpG islands, complete sequence Length = 160597 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 ggaggttgtccaagttgtcaggac 369 |||||||||||||||| ||||||| Sbjct: 101634 ggaggttgtccaagttctcaggac 101611
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 280 tggcaccagcctcgatgccagcggcaccacca 311 |||||||| ||||||||||| || |||||||| Sbjct: 533008 tggcaccatcctcgatgccaacgtcaccacca 532977
>emb|AL356796.16| Human DNA sequence from clone RP11-82I1 on chromosome 9 Contains the 3' end of a novel gene (FLJ11985, MGC11337) (KIAA0870), the ORM1 gene for orosomucoid 1 (AGP1, AGP-A), the ORM2 gene for orosomucoid 2 (AGP2, AGP-B) and the gene for AT-hook transcription factor AKNA, complete sequence Length = 125673 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ctctgcctttttctcttctg 189 |||||||||||||||||||| Sbjct: 60300 ctctgcctttttctcttctg 60319 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ctctgcctttttctcttctg 189 |||||||||||||||||||| Sbjct: 53529 ctctgcctttttctcttctg 53548
>emb|AL034372.33|HS273P12 Human DNA sequence from clone RP1-273P12 on chromosome 6p22.3-23 Contains an esterase D/formylglutathione hydrolase (ESD) pseudogene, the 5' part of the CAP2 gene encoding adenylyl cyclase-associated protein 2 and a 60S ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 166234 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 176 ctttttctcttctgcctttttctcttct 203 ||||||||||||| ||||| |||||||| Sbjct: 114470 ctttttctcttcttcctttctctcttct 114443
>emb|AL022399.2|HS782D21 Human DNA sequence from clone RP4-782D21 on chromosome 1q32.2-41 Contains the 5' end of the SYT14 gene for synaptotagmin XIV, complete sequence Length = 84464 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ttttctcttctgcctttttctcttctgc 205 ||||| ||||||||||||| |||||||| Sbjct: 53944 ttttcccttctgcctttttttcttctgc 53971
>ref|XM_775903.1| PREDICTED: Strongylocentrotus purpuratus similar to Cathepsin L2 precursor (Cathepsin V) (Cathepsin U) (LOC575506), mRNA Length = 990 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 tcagggacatcatcatcgtc 256 |||||||||||||||||||| Sbjct: 322 tcagggacatcatcatcgtc 341
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 ttttctcttctgcctttttctctt 201 ||||||||||||||| |||||||| Sbjct: 1658222 ttttctcttctgcctgtttctctt 1658199
>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24 Length = 304450 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 catcatcatcgtcgtcagcc 263 |||||||||||||||||||| Sbjct: 227604 catcatcatcgtcgtcagcc 227623
>gb|AC150372.15| Medicago truncatula clone mth2-151k24, complete sequence Length = 100538 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 aggaccaagttgattgataa 384 |||||||||||||||||||| Sbjct: 35212 aggaccaagttgattgataa 35231
>gb|AC114965.2| Homo sapiens chromosome 5 clone RP11-28P24, complete sequence Length = 66471 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tcaggaccaagttgattgat 382 |||||||||||||||||||| Sbjct: 55376 tcaggaccaagttgattgat 55395
>gb|AC108698.3| Homo sapiens 3 BAC RP11-12A13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 73477 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 156 catcaaaatcacgactctgcctttttct 183 |||||||||||| || |||||||||||| Sbjct: 67087 catcaaaatcacaaccctgcctttttct 67060
>gb|AC114491.1| Homo sapiens chromosome 1 clone RP11-270C12, complete sequence Length = 207698 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tttctcttctgcctttttct 198 |||||||||||||||||||| Sbjct: 113521 tttctcttctgcctttttct 113502
>gb|AC113397.2| Homo sapiens chromosome 5 clone RP11-433B15, complete sequence Length = 162386 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tcaggaccaagttgattgat 382 |||||||||||||||||||| Sbjct: 32470 tcaggaccaagttgattgat 32489
>gb|AC002316.2| Homo sapiens chromosome 17, clone CTB-11O23, complete sequence Length = 88004 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctcttctgcctttttctctt 201 |||||||||||||||||||| Sbjct: 10896 ctcttctgcctttttctctt 10877
>dbj|AK162008.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720464I06 product:myosin, light polypeptide kinase, full insert sequence Length = 2329 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 cttcaaatgtctctccagggacaa 234 ||||||||||||| |||||||||| Sbjct: 163 cttcaaatgtctccccagggacaa 140
>emb|BX465860.7| Zebrafish DNA sequence from clone DKEY-29L21 in linkage group 1, complete sequence Length = 153901 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 cagtaaacatgcatcaaaat 164 |||||||||||||||||||| Sbjct: 104803 cagtaaacatgcatcaaaat 104822
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 cctcgatgccagcggcacca 308 |||||||||||||||||||| Sbjct: 825497 cctcgatgccagcggcacca 825478
>gb|AF335470.1|AF335470 Mus musculus myosin light chain kinase (Mylk) gene, partial cds Length = 180102 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 cttcaaatgtctctccagggacaa 234 ||||||||||||| |||||||||| Sbjct: 159660 cttcaaatgtctccccagggacaa 159637
>dbj|AK044449.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930013N07 product:unclassifiable, full insert sequence Length = 3402 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 cttcaaatgtctctccagggacaa 234 ||||||||||||| |||||||||| Sbjct: 2301 cttcaaatgtctccccagggacaa 2324
>dbj|AK053822.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130310I04 product:unclassifiable, full insert sequence Length = 3483 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 cttcaaatgtctctccagggacaa 234 ||||||||||||| |||||||||| Sbjct: 2288 cttcaaatgtctccccagggacaa 2311
>gb|AC146534.3| Otolemur garnettii clone CH256-50E17, complete sequence Length = 139631 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tttttctcttctgcctttttctct 200 |||||||||||||||| ||||||| Sbjct: 41536 tttttctcttctgcctatttctct 41559
>gb|AC010888.12| Homo sapiens BAC clone RP11-418N16 from 2, complete sequence Length = 191863 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 acgactctgcctttttctct 185 |||||||||||||||||||| Sbjct: 23036 acgactctgcctttttctct 23055
>gb|AC108715.2| Homo sapiens 3 BAC RP11-184F3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176462 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 156 catcaaaatcacgactctgcctttttct 183 |||||||||||| || |||||||||||| Sbjct: 129544 catcaaaatcacaaccctgcctttttct 129571
>gb|AC139722.1| Homo sapiens BAC clone RP11-100N20 from 4, complete sequence Length = 116694 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 gttgtcaggaccaagttgat 378 |||||||||||||||||||| Sbjct: 89351 gttgtcaggaccaagttgat 89370
>gb|AY524791.1| Verticillium dahliae allergen Asp f2-like protein mRNA, complete cds Length = 1136 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 cgatgccagcggcaccacca 311 |||||||||||||||||||| Sbjct: 933 cgatgccagcggcaccacca 952
>gb|AF242860.1|AF242860 Trypanosoma cruzi clone cosmid 1K19 NPK-1 protein kinase-like protein gene, complete cds; and unknown genes Length = 39465 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ttttctcttctgcctttttc 197 |||||||||||||||||||| Sbjct: 33500 ttttctcttctgcctttttc 33519
>emb|AL929093.6| Zebrafish DNA sequence from clone CH211-149P10, complete sequence Length = 177248 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 cagtaaacatgcatcaaaat 164 |||||||||||||||||||| Sbjct: 56047 cagtaaacatgcatcaaaat 56028
>gb|AC144773.3| Mus musculus BAC clone RP24-176P22 from 1, complete sequence Length = 167510 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tttctcttctgcctttttctcttc 202 |||||||||| ||||||||||||| Sbjct: 14604 tttctcttcttcctttttctcttc 14581
>gb|AC007012.1|AC007012 Homo sapiens chromosome 16, clone 185J20, complete sequence Length = 168731 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ctgcctttttctcttctgcc 191 |||||||||||||||||||| Sbjct: 136485 ctgcctttttctcttctgcc 136466
>dbj|AP003043.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-617B3, complete sequence Length = 180648 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gcctttttctcttctgcctt 193 |||||||||||||||||||| Sbjct: 13620 gcctttttctcttctgcctt 13601
>dbj|AP000977.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-730K11, complete sequence Length = 187080 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 ttctcttctgcctttttctcttct 203 ||||||||| |||||||||||||| Sbjct: 81147 ttctcttcttcctttttctcttct 81170
>gb|AC139575.3| Mus musculus BAC clone RP23-430K5 from 8, complete sequence Length = 192317 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ttgtcaggaccaagttgatt 379 |||||||||||||||||||| Sbjct: 56717 ttgtcaggaccaagttgatt 56736
>gb|AC115895.9| Mus musculus chromosome 5, clone RP24-443E20, complete sequence Length = 174073 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gcctcttcaaatgtctctcc 226 |||||||||||||||||||| Sbjct: 36179 gcctcttcaaatgtctctcc 36198
>gb|M21540.1|HUMA1GLY2 Human alpha-1-acid glycoprotein 2 (AGP2) gene, complete cds Length = 4944 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ctctgcctttttctcttctg 189 |||||||||||||||||||| Sbjct: 1823 ctctgcctttttctcttctg 1842 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,860,628 Number of Sequences: 3902068 Number of extensions: 5860628 Number of successful extensions: 122681 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 156 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121964 Number of HSP's gapped (non-prelim): 687 length of query: 590 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 567 effective length of database: 17,143,297,704 effective search space: 9720249798168 effective search space used: 9720249798168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
