ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107387.1| Zea mays PCO149313 mRNA sequence 161 9e-37
2ref|NM_191406.1| Oryza sativa (japonica cultivar-group), predic... 159 4e-36
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 159 4e-36
4dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic D... 159 4e-36
5dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic D... 159 4e-36
6dbj|AK105465.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 4e-36
7dbj|AK101775.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 4e-36
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 143 2e-31
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 143 2e-31
10gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare str... 143 2e-31
11dbj|AK099791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 5e-29
12ref|XM_475640.1| Oryza sativa (japonica cultivar-group), predic... 62 6e-07
13gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome... 62 6e-07
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 62 6e-07
15dbj|AK067124.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 6e-07
16gb|AY064216.1| Capsicum annuum receptor protein kinase-like prot... 52 6e-04
17ref|NM_120071.1| Arabidopsis thaliana kinase AT4G39110 mRNA, com... 46 0.038
18ref|XM_476281.1| Oryza sativa (japonica cultivar-group), predic... 46 0.038
19gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.038
20gb|AC135923.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.038
21emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, ... 46 0.038
22emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BA... 46 0.038
23emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, B... 46 0.038
24dbj|AK121335.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.038
25dbj|AK100616.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.038
26gb|BT024128.1| Zea mays clone EL01N0449F01 mRNA sequence 46 0.038
27gb|AC169371.2| Sorghum bicolor clone SB_BBc0127F08, complete seq... 46 0.038
28gb|AC026371.9|AC026371 Homo sapiens 12 BAC RP11-59L15 (Roswell P... 44 0.15
29gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 44 0.15
30gb|AC149542.1| Populus trichocarpa clone Pop1-2C5, complete sequ... 42 0.59
31gb|AE005694.1| Caulobacter crescentus CB15 section 20 of 359 of ... 42 0.59
32gb|AC068061.6| Homo sapiens chromosome 10 clone RP11-444F4, comp... 42 0.59
33gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, co... 40 2.3
34gb|AY110775.1| Zea mays CL12999_1 mRNA sequence 40 2.3
35gb|U73645.1|HSU73645 Human chromosome 11 46b2 cosmid, complete s... 40 2.3
36gb|AC162367.5| Mus musculus chromosome 8, clone RP24-209A21, com... 38 9.3
37gb|BC058518.1| Mus musculus BCL2-associated athanogene 4, mRNA (... 38 9.3
38ref|NM_026121.2| Mus musculus BCL2-associated athanogene 4 (Bag4... 38 9.3
39gb|BC009102.1| Mus musculus BCL2-associated athanogene 4, mRNA (... 38 9.3
40gb|BC037239.1| Mus musculus BCL2-associated athanogene 4, mRNA (... 38 9.3
41gb|AC156990.11| Mus musculus chromosome 8, clone RP23-322E23, co... 38 9.3
42emb|AL162381.16| Human DNA sequence from clone RP11-174B19 on ch... 38 9.3
43emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS finger... 38 9.3
44emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 38 9.3
45emb|AL954236.1| Pan troglodytes chromosome 22 clone RP43-054L10 ... 38 9.3
46gb|AC126917.1| Homo sapiens chromosome 5 clone RP11-467F22, comp... 38 9.3
47gb|AF332863.1| Mus musculus silencer of death domain (SODD) mRNA... 38 9.3
48dbj|AK136899.1| Mus musculus adult male diencephalon cDNA, RIKEN... 38 9.3
49dbj|AK160316.1| Mus musculus 16 days embryo lung cDNA, RIKEN ful... 38 9.3
50gb|AC104269.1| Caenorhabditis briggsae cosmid CB047C11, complete... 38 9.3
51dbj|AK162658.1| Mus musculus adult male bone cDNA, RIKEN full-le... 38 9.3
52dbj|AK010765.1| Mus musculus ES cells cDNA, RIKEN full-length en... 38 9.3
53dbj|AK090261.1| Mus musculus 21 days neonate cerebellum cDNA, RI... 38 9.3
54dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 38 9.3
55gb|AC084440.1|AC084440 Caenorhabditis briggsae cosmid CB005K20, ... 38 9.3
56gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y... 38 9.3
57gb|AC079465.5| Homo sapiens chromosome 5 clone CTD-2124P24, comp... 38 9.3
58gb|AF041427.1|AF041427 Homo sapiens ribosomal protein s4 Y isofo... 38 9.3
59emb|AL929535.6| Zebrafish DNA sequence from clone CH211-151O1, c... 38 9.3
60emb|AL824716.8| Mouse DNA sequence from clone RP23-277F20 on chr... 38 9.3 
>gb|AY107387.1| Zea mays PCO149313 mRNA sequence
          Length = 1336

 Score =  161 bits (81), Expect = 9e-37
 Identities = 144/165 (87%)
 Strand = Plus / Minus

                                                                       
Query: 10  gccctcatctgacatcccacagccaaagcttccgctctcctccgcgctttcctgcatctg 69
           |||||| ||||||||||| ||||||| |||||||||||| || |||| ||||||||||||
Sbjct: 906 gccctcgtctgacatcccgcagccaaggcttccgctctcttctgcgccttcctgcatctg 847

                                                                       
Query: 70  aagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcgatgccgttgtc 129
           ||| || |||||||||||||| |||||||| |||||||||||||| ||||| || |  ||
Sbjct: 846 aagggcgaactccaggttccagagcacatcacccatcgaagggcggtcgattccctgatc 787

                                                        
Query: 130 ggcgacgcacttctcagctgtctcggcaaacttcttgaagcactg 174
            |  || |||||||| ||||||||||| |||||||||||||||||
Sbjct: 786 agaaacacacttctcggctgtctcggcgaacttcttgaagcactg 742
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>ref|NM_191406.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2691

 Score =  159 bits (80), Expect = 4e-36
 Identities = 158/184 (85%)
 Strand = Plus / Minus

                                                                        
Query: 5    ggagtgccctcatctgacatcccacagccaaagcttccgctctcctccgcgctttcctgc 64
            |||||||||||||||||||||||||| |||| |||||| || ||||| || |||||||||
Sbjct: 2519 ggagtgccctcatctgacatcccacaaccaatgcttccactatcctctgcactttcctgc 2460

                                                                        
Query: 65   atctgaagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcgatgccg 124
            || ||||| ||||| |||| |||||| |||||||||||||| ||||| || |||||||| 
Sbjct: 2459 atttgaagggcaaattccaagttccacagcacatctcccattgaaggacgatcgatgcct 2400

                                                                        
Query: 125  ttgtcggcgacgcacttctcagctgtctcggcaaacttcttgaagcactgcggaacaatc 184
            |  || |  || || |||||||| |||||||||||||||||||||||||| ||| | |||
Sbjct: 2399 tcatctgaaacacatttctcagcagtctcggcaaacttcttgaagcactgtggagcgatc 2340

                
Query: 185  tttc 188
            ||||
Sbjct: 2339 tttc 2336
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  159 bits (80), Expect = 4e-36
 Identities = 158/184 (85%)
 Strand = Plus / Minus

                                                                            
Query: 5        ggagtgccctcatctgacatcccacagccaaagcttccgctctcctccgcgctttcctgc 64
                |||||||||||||||||||||||||| |||| |||||| || ||||| || |||||||||
Sbjct: 32457882 ggagtgccctcatctgacatcccacaaccaatgcttccactatcctctgcactttcctgc 32457823

                                                                            
Query: 65       atctgaagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcgatgccg 124
                || ||||| ||||| |||| |||||| |||||||||||||| ||||| || |||||||| 
Sbjct: 32457822 atttgaagggcaaattccaagttccacagcacatctcccattgaaggacgatcgatgcct 32457763

                                                                            
Query: 125      ttgtcggcgacgcacttctcagctgtctcggcaaacttcttgaagcactgcggaacaatc 184
                |  || |  || || |||||||| |||||||||||||||||||||||||| ||| | |||
Sbjct: 32457762 tcatctgaaacacatttctcagcagtctcggcaaacttcttgaagcactgtggagcgatc 32457703

                    
Query: 185      tttc 188
                ||||
Sbjct: 32457702 tttc 32457699
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>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0665A11
          Length = 166421

 Score =  159 bits (80), Expect = 4e-36
 Identities = 158/184 (85%)
 Strand = Plus / Minus

                                                                         
Query: 5     ggagtgccctcatctgacatcccacagccaaagcttccgctctcctccgcgctttcctgc 64
             |||||||||||||||||||||||||| |||| |||||| || ||||| || |||||||||
Sbjct: 45403 ggagtgccctcatctgacatcccacaaccaatgcttccactatcctctgcactttcctgc 45344

                                                                         
Query: 65    atctgaagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcgatgccg 124
             || ||||| ||||| |||| |||||| |||||||||||||| ||||| || |||||||| 
Sbjct: 45343 atttgaagggcaaattccaagttccacagcacatctcccattgaaggacgatcgatgcct 45284

                                                                         
Query: 125   ttgtcggcgacgcacttctcagctgtctcggcaaacttcttgaagcactgcggaacaatc 184
             |  || |  || || |||||||| |||||||||||||||||||||||||| ||| | |||
Sbjct: 45283 tcatctgaaacacatttctcagcagtctcggcaaacttcttgaagcactgtggagcgatc 45224

                 
Query: 185   tttc 188
             ||||
Sbjct: 45223 tttc 45220
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>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1143G03
          Length = 137770

 Score =  159 bits (80), Expect = 4e-36
 Identities = 158/184 (85%)
 Strand = Plus / Minus

                                                                          
Query: 5      ggagtgccctcatctgacatcccacagccaaagcttccgctctcctccgcgctttcctgc 64
              |||||||||||||||||||||||||| |||| |||||| || ||||| || |||||||||
Sbjct: 137379 ggagtgccctcatctgacatcccacaaccaatgcttccactatcctctgcactttcctgc 137320

                                                                          
Query: 65     atctgaagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcgatgccg 124
              || ||||| ||||| |||| |||||| |||||||||||||| ||||| || |||||||| 
Sbjct: 137319 atttgaagggcaaattccaagttccacagcacatctcccattgaaggacgatcgatgcct 137260

                                                                          
Query: 125    ttgtcggcgacgcacttctcagctgtctcggcaaacttcttgaagcactgcggaacaatc 184
              |  || |  || || |||||||| |||||||||||||||||||||||||| ||| | |||
Sbjct: 137259 tcatctgaaacacatttctcagcagtctcggcaaacttcttgaagcactgtggagcgatc 137200

                  
Query: 185    tttc 188
              ||||
Sbjct: 137199 tttc 137196
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>dbj|AK105465.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-126-A03, full
            insert sequence
          Length = 1761

 Score =  159 bits (80), Expect = 4e-36
 Identities = 158/184 (85%)
 Strand = Plus / Minus

                                                                        
Query: 5    ggagtgccctcatctgacatcccacagccaaagcttccgctctcctccgcgctttcctgc 64
            |||||||||||||||||||||||||| |||| |||||| || ||||| || |||||||||
Sbjct: 1332 ggagtgccctcatctgacatcccacaaccaatgcttccactatcctctgcactttcctgc 1273

                                                                        
Query: 65   atctgaagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcgatgccg 124
            || ||||| ||||| |||| |||||| |||||||||||||| ||||| || |||||||| 
Sbjct: 1272 atttgaagggcaaattccaagttccacagcacatctcccattgaaggacgatcgatgcct 1213

                                                                        
Query: 125  ttgtcggcgacgcacttctcagctgtctcggcaaacttcttgaagcactgcggaacaatc 184
            |  || |  || || |||||||| |||||||||||||||||||||||||| ||| | |||
Sbjct: 1212 tcatctgaaacacatttctcagcagtctcggcaaacttcttgaagcactgtggagcgatc 1153

                
Query: 185  tttc 188
            ||||
Sbjct: 1152 tttc 1149
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>dbj|AK101775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064M23, full
            insert sequence
          Length = 3155

 Score =  159 bits (80), Expect = 4e-36
 Identities = 158/184 (85%)
 Strand = Plus / Minus

                                                                        
Query: 5    ggagtgccctcatctgacatcccacagccaaagcttccgctctcctccgcgctttcctgc 64
            |||||||||||||||||||||||||| |||| |||||| || ||||| || |||||||||
Sbjct: 2749 ggagtgccctcatctgacatcccacaaccaatgcttccactatcctctgcactttcctgc 2690

                                                                        
Query: 65   atctgaagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcgatgccg 124
            || ||||| ||||| |||| |||||| |||||||||||||| ||||| || |||||||| 
Sbjct: 2689 atttgaagggcaaattccaagttccacagcacatctcccattgaaggacgatcgatgcct 2630

                                                                        
Query: 125  ttgtcggcgacgcacttctcagctgtctcggcaaacttcttgaagcactgcggaacaatc 184
            |  || |  || || |||||||| |||||||||||||||||||||||||| ||| | |||
Sbjct: 2629 tcatctgaaacacatttctcagcagtctcggcaaacttcttgaagcactgtggagcgatc 2570

                
Query: 185  tttc 188
            ||||
Sbjct: 2569 tttc 2566
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  143 bits (72), Expect = 2e-31
 Identities = 147/172 (85%)
 Strand = Plus / Minus

                                                                            
Query: 17       tctgacatcccacagccaaagcttccgctctcctccgcgctttcctgcatctgaagagca 76
                |||||||||||||| |||| ||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 12284501 tctgacatcccacatccaaggcttccgctctcctctgcactttcctgcatttgaagggca 12284442

                                                                            
Query: 77       aactccaggttccaaagcacatctcccatcgaagggcgttcgatgccgttgtcggcgacg 136
                || |||| |||||| |||||||||||||||||||| || || ||||| |  || |  || 
Sbjct: 12284441 aattccaagttccacagcacatctcccatcgaaggacggtcaatgccctgatcagaaaca 12284382

                                                                    
Query: 137      cacttctcagctgtctcggcaaacttcttgaagcactgcggaacaatctttc 188
                |||||||||||||| || |||||||||||||| || || ||| |||||||||
Sbjct: 12284381 cacttctcagctgtttctgcaaacttcttgaaacattgtggagcaatctttc 12284330
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  143 bits (72), Expect = 2e-31
 Identities = 147/172 (85%)
 Strand = Plus / Minus

                                                                            
Query: 17       tctgacatcccacagccaaagcttccgctctcctccgcgctttcctgcatctgaagagca 76
                |||||||||||||| |||| ||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 12281264 tctgacatcccacatccaaggcttccgctctcctctgcactttcctgcatttgaagggca 12281205

                                                                            
Query: 77       aactccaggttccaaagcacatctcccatcgaagggcgttcgatgccgttgtcggcgacg 136
                || |||| |||||| |||||||||||||||||||| || || ||||| |  || |  || 
Sbjct: 12281204 aattccaagttccacagcacatctcccatcgaaggacggtcaatgccctgatcagaaaca 12281145

                                                                    
Query: 137      cacttctcagctgtctcggcaaacttcttgaagcactgcggaacaatctttc 188
                |||||||||||||| || |||||||||||||| || || ||| |||||||||
Sbjct: 12281144 cacttctcagctgtttctgcaaacttcttgaaacattgtggagcaatctttc 12281093
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>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0029K10, from chromosome 3, complete sequence
          Length = 135940

 Score =  143 bits (72), Expect = 2e-31
 Identities = 147/172 (85%)
 Strand = Plus / Minus

                                                                         
Query: 17    tctgacatcccacagccaaagcttccgctctcctccgcgctttcctgcatctgaagagca 76
             |||||||||||||| |||| ||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 54034 tctgacatcccacatccaaggcttccgctctcctctgcactttcctgcatttgaagggca 53975

                                                                         
Query: 77    aactccaggttccaaagcacatctcccatcgaagggcgttcgatgccgttgtcggcgacg 136
             || |||| |||||| |||||||||||||||||||| || || ||||| |  || |  || 
Sbjct: 53974 aattccaagttccacagcacatctcccatcgaaggacggtcaatgccctgatcagaaaca 53915

                                                                 
Query: 137   cacttctcagctgtctcggcaaacttcttgaagcactgcggaacaatctttc 188
             |||||||||||||| || |||||||||||||| || || ||| |||||||||
Sbjct: 53914 cacttctcagctgtttctgcaaacttcttgaaacattgtggagcaatctttc 53863
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>dbj|AK099791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097C16, full
            insert sequence
          Length = 3171

 Score =  135 bits (68), Expect = 5e-29
 Identities = 146/172 (84%)
 Strand = Plus / Minus

                                                                        
Query: 17   tctgacatcccacagccaaagcttccgctctcctccgcgctttcctgcatctgaagagca 76
            |||||||||||||| |||| ||||||||||||||| || ||||||||||| ||||| | |
Sbjct: 2740 tctgacatcccacatccaaggcttccgctctcctctgcactttcctgcatttgaagggta 2681

                                                                        
Query: 77   aactccaggttccaaagcacatctcccatcgaagggcgttcgatgccgttgtcggcgacg 136
            || |||| |||||| |||||||||||||||||||| || || ||||| |  || |  || 
Sbjct: 2680 aattccaagttccacagcacatctcccatcgaaggacggtcaatgccctgatcagaaaca 2621

                                                                
Query: 137  cacttctcagctgtctcggcaaacttcttgaagcactgcggaacaatctttc 188
            |||||||||||||| || |||||||||||||| || || ||| |||||||||
Sbjct: 2620 cacttctcagctgtttctgcaaacttcttgaaacattgtggagcaatctttc 2569
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>ref|XM_475640.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2529

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 75   caaactccaggttccaaagcacatctcccatcgaagggcgttcgatgccgt 125
            |||||||||||||||| || ||||||||||||| ||| ||||||| |||||
Sbjct: 2332 caaactccaggttccacaggacatctcccatcgtaggccgttcgacgccgt 2282
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>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099P06, complete sequence
          Length = 135117

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 75    caaactccaggttccaaagcacatctcccatcgaagggcgttcgatgccgt 125
             |||||||||||||||| || ||||||||||||| ||| ||||||| |||||
Sbjct: 35286 caaactccaggttccacaggacatctcccatcgtaggccgttcgacgccgt 35236
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                  
Query: 75      caaactccaggttccaaagcacatctcccatcgaagggcgttcgatgccgt 125
               |||||||||||||||| || ||||||||||||| ||| ||||||| |||||
Sbjct: 3612939 caaactccaggttccacaggacatctcccatcgtaggccgttcgacgccgt 3612889



 Score = 46.1 bits (23), Expect = 0.038
 Identities = 86/107 (80%)
 Strand = Plus / Plus

                                                                            
Query: 59       tcctgcatctgaagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcg 118
                ||||||||||| |  || ||||| ||||||||||| || || ||||| || ||||| || 
Sbjct: 11688917 tcctgcatctgcaacgcgaactcaaggttccaaaggacgtcgcccatggacgggcggtcc 11688976

                                                               
Query: 119      atgccgttgtcggcgacgcacttctcagctgtctcggcaaacttctt 165
                | ||| | |||||| | ||||||||| || || ||||| ||||||||
Sbjct: 11688977 acgccatggtcggccaggcacttctctgccgtttcggcgaacttctt 11689023
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>dbj|AK067124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098L04, full
           insert sequence
          Length = 1216

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                              
Query: 75  caaactccaggttccaaagcacatctcccatcgaagggcgttcgatgccgt 125
           |||||||||||||||| || ||||||||||||| ||| ||||||| |||||
Sbjct: 800 caaactccaggttccacaggacatctcccatcgtaggccgttcgacgccgt 750
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>gb|AY064216.1| Capsicum annuum receptor protein kinase-like protein mRNA, complete
            cds
          Length = 2312

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 71   agagcaaactccaggttccaaagcacatctcccatcga 108
            |||||||| || |||||||| |||||||||||||||||
Sbjct: 1784 agagcaaattcaaggttccacagcacatctcccatcga 1747
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>ref|NM_120071.1| Arabidopsis thaliana kinase AT4G39110 mRNA, complete cds
          Length = 2637

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 67   ctgaagagcaaactccaggttccaaagcacatctcccat 105
            |||||||||| |||||| |||||| || |||||||||||
Sbjct: 2400 ctgaagagcatactccaagttccacagaacatctcccat 2362
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>ref|XM_476281.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2610

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                        
Query: 59   tcctgcatctgaagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcg 118
            ||||||||||| |  || ||||| ||||||||||| || || ||||| || ||||| || 
Sbjct: 2426 tcctgcatctgcaacgcgaactcaaggttccaaaggacgtcgcccatggacgggcggtcc 2367

                                                           
Query: 119  atgccgttgtcggcgacgcacttctcagctgtctcggcaaacttctt 165
            | ||| | |||||| | ||||||||| || || ||||| ||||||||
Sbjct: 2366 acgccatggtcggccaggcacttctctgccgtttcggcgaacttctt 2320
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>gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0048F12,
              complete sequence
          Length = 139627

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 86/107 (80%)
 Strand = Plus / Plus

                                                                          
Query: 59     tcctgcatctgaagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcg 118
              ||||||||||| |  || ||||| ||||||||||| || || ||||| || ||||| || 
Sbjct: 133352 tcctgcatctgcaacgcgaactcaaggttccaaaggacgtcgcccatggacgggcggtcc 133411

                                                             
Query: 119    atgccgttgtcggcgacgcacttctcagctgtctcggcaaacttctt 165
              | ||| | |||||| | ||||||||| || || ||||| ||||||||
Sbjct: 133412 acgccatggtcggccaggcacttctctgccgtttcggcgaacttctt 133458
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>gb|AC135923.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0479C09,
             complete sequence
          Length = 156776

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 86/107 (80%)
 Strand = Plus / Plus

                                                                         
Query: 59    tcctgcatctgaagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcg 118
             ||||||||||| |  || ||||| ||||||||||| || || ||||| || ||||| || 
Sbjct: 14557 tcctgcatctgcaacgcgaactcaaggttccaaaggacgtcgcccatggacgggcggtcc 14616

                                                            
Query: 119   atgccgttgtcggcgacgcacttctcagctgtctcggcaaacttctt 165
             | ||| | |||||| | ||||||||| || || ||||| ||||||||
Sbjct: 14617 acgccatggtcggccaggcacttctctgccgtttcggcgaacttctt 14663
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>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90
          Length = 198987

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 67     ctgaagagcaaactccaggttccaaagcacatctcccat 105
              |||||||||| |||||| |||||| || |||||||||||
Sbjct: 136876 ctgaagagcatactccaagttccacagaacatctcccat 136914
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>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project)
          Length = 89035

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 67   ctgaagagcaaactccaggttccaaagcacatctcccat 105
            |||||||||| |||||| |||||| || |||||||||||
Sbjct: 5412 ctgaagagcatactccaagttccacagaacatctcccat 5450
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>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project)
          Length = 100469

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 67    ctgaagagcaaactccaggttccaaagcacatctcccat 105
             |||||||||| |||||| |||||| || |||||||||||
Sbjct: 98865 ctgaagagcatactccaagttccacagaacatctcccat 98903
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>dbj|AK121335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119L07, full
            insert sequence
          Length = 3171

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                        
Query: 59   tcctgcatctgaagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcg 118
            ||||||||||| |  || ||||| ||||||||||| || || ||||| || ||||| || 
Sbjct: 2588 tcctgcatctgcaacgcgaactcaaggttccaaaggacgtcgcccatggacgggcggtcc 2529

                                                           
Query: 119  atgccgttgtcggcgacgcacttctcagctgtctcggcaaacttctt 165
            | ||| | |||||| | ||||||||| || || ||||| ||||||||
Sbjct: 2528 acgccatggtcggccaggcacttctctgccgtttcggcgaacttctt 2482
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>dbj|AK100616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108B08, full
            insert sequence
          Length = 2441

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                        
Query: 59   tcctgcatctgaagagcaaactccaggttccaaagcacatctcccatcgaagggcgttcg 118
            ||||||||||| |  || ||||| ||||||||||| || || ||||| || ||||| || 
Sbjct: 2062 tcctgcatctgcaacgcgaactcaaggttccaaaggacgtcgcccatggacgggcggtcc 2003

                                                           
Query: 119  atgccgttgtcggcgacgcacttctcagctgtctcggcaaacttctt 165
            | ||| | |||||| | ||||||||| || || ||||| ||||||||
Sbjct: 2002 acgccatggtcggccaggcacttctctgccgtttcggcgaacttctt 1956
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>gb|BT024128.1| Zea mays clone EL01N0449F01 mRNA sequence
          Length = 1401

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 75  caaactccaggttccaaagcacatctcccat 105
           |||||||||||||||| |||||||| |||||
Sbjct: 990 caaactccaggttccacagcacatcccccat 960
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>gb|AC169371.2| Sorghum bicolor clone SB_BBc0127F08, complete sequence
          Length = 70712

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 75    caaactccaggttccaaagcacatctcccat 105
             |||||||||||||||| |||||||| |||||
Sbjct: 43946 caaactccaggttccacagcacatcacccat 43976
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>gb|AC026371.9|AC026371 Homo sapiens 12 BAC RP11-59L15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152951

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 73     agcaaactccaggttccaaagcacat 98
              ||||||||||||||||||||| ||||
Sbjct: 114307 agcaaactccaggttccaaagaacat 114332
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 47     tcctccgcgctttcctgcatct 68
              ||||||||||||||||||||||
Sbjct: 298970 tcctccgcgctttcctgcatct 298949
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>gb|AC149542.1| Populus trichocarpa clone Pop1-2C5, complete sequence
          Length = 146274

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 86     ttccaaagcacatctcccatcgaagggcg 114
              ||||| |||||||| ||||||||||||||
Sbjct: 112988 ttccacagcacatcacccatcgaagggcg 113016
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>gb|AE005694.1| Caulobacter crescentus CB15 section 20 of 359 of the complete genome
          Length = 14034

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 116  tcgatgccgttgtcggcgacg 136
            |||||||||||||||||||||
Sbjct: 3376 tcgatgccgttgtcggcgacg 3396
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>gb|AC068061.6| Homo sapiens chromosome 10 clone RP11-444F4, complete sequence
          Length = 190007

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 73    agcaaactccaggttccaaag 93
             |||||||||||||||||||||
Sbjct: 26641 agcaaactccaggttccaaag 26621
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>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence
          Length = 207024

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   cttcttgaagcactgcggaacaat 183
             |||||||||||||||| |||||||
Sbjct: 30729 cttcttgaagcactgctgaacaat 30706
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>gb|AY110775.1| Zea mays CL12999_1 mRNA sequence
          Length = 625

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 75  caaactccaggttccaaagcacat 98
           |||||||||||||||| |||||||
Sbjct: 397 caaactccaggttccacagcacat 420
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>gb|U73645.1|HSU73645 Human chromosome 11 46b2 cosmid, complete sequence
          Length = 36558

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    agcaaactccaggttccaaa 92
             ||||||||||||||||||||
Sbjct: 17704 agcaaactccaggttccaaa 17723
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>gb|AC162367.5| Mus musculus chromosome 8, clone RP24-209A21, complete sequence
          Length = 149211

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     gaggagtgccctcatctga 21
             |||||||||||||||||||
Sbjct: 33816 gaggagtgccctcatctga 33798
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>gb|BC058518.1| Mus musculus BCL2-associated athanogene 4, mRNA (cDNA clone MGC:66831
            IMAGE:5717401), complete cds
          Length = 2042

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 3    gaggagtgccctcatctga 21
            |||||||||||||||||||
Sbjct: 1153 gaggagtgccctcatctga 1135
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>ref|NM_026121.2| Mus musculus BCL2-associated athanogene 4 (Bag4), mRNA
          Length = 4823

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 3    gaggagtgccctcatctga 21
            |||||||||||||||||||
Sbjct: 1170 gaggagtgccctcatctga 1152
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>gb|BC009102.1| Mus musculus BCL2-associated athanogene 4, mRNA (cDNA clone
           IMAGE:3482770), partial cds
          Length = 918

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 3   gaggagtgccctcatctga 21
           |||||||||||||||||||
Sbjct: 204 gaggagtgccctcatctga 186
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>gb|BC037239.1| Mus musculus BCL2-associated athanogene 4, mRNA (cDNA clone
            IMAGE:4953039), partial cds
          Length = 4574

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 3    gaggagtgccctcatctga 21
            |||||||||||||||||||
Sbjct: 1168 gaggagtgccctcatctga 1150
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>gb|AC156990.11| Mus musculus chromosome 8, clone RP23-322E23, complete sequence
          Length = 201790

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      gaggagtgccctcatctga 21
              |||||||||||||||||||
Sbjct: 189494 gaggagtgccctcatctga 189512
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>emb|AL162381.16| Human DNA sequence from clone RP11-174B19 on chromosome 6 Contains
            part of a gene for a novel protein (CGI-203), complete
            sequence
          Length = 19176

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 10   gccctcatctgacatccca 28
            |||||||||||||||||||
Sbjct: 8588 gccctcatctgacatccca 8570
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>emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 5/10
          Length = 349799

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 52     cgcgctttcctgcatctga 70
              |||||||||||||||||||
Sbjct: 318906 cgcgctttcctgcatctga 318888
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>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 117   cgatgccgttgtcggcgacgcac 139
             ||||||||||||||| |||||||
Sbjct: 13024 cgatgccgttgtcggtgacgcac 13046
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>emb|AL954236.1| Pan troglodytes chromosome 22 clone RP43-054L10 map 22q22.2-q22.3,
              complete sequence
          Length = 195913

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 67     ctgaagagcaaactccagg 85
              |||||||||||||||||||
Sbjct: 112976 ctgaagagcaaactccagg 112958
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>gb|AC126917.1| Homo sapiens chromosome 5 clone RP11-467F22, complete sequence
          Length = 206737

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 154    ggcaaacttcttgaagcac 172
              |||||||||||||||||||
Sbjct: 136237 ggcaaacttcttgaagcac 136219
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>gb|AF332863.1| Mus musculus silencer of death domain (SODD) mRNA, complete cds
          Length = 2154

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 3    gaggagtgccctcatctga 21
            |||||||||||||||||||
Sbjct: 1163 gaggagtgccctcatctga 1145
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>dbj|AK136899.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330172K04 product:BCL2-associated
            athanogene 4, full insert sequence
          Length = 4550

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 3    gaggagtgccctcatctga 21
            |||||||||||||||||||
Sbjct: 1160 gaggagtgccctcatctga 1142
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>dbj|AK160316.1| Mus musculus 16 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:8430404F19 product:BCL2-associated
            athanogene 4, full insert sequence
          Length = 1950

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 3    gaggagtgccctcatctga 21
            |||||||||||||||||||
Sbjct: 1162 gaggagtgccctcatctga 1144
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>gb|AC104269.1| Caenorhabditis briggsae cosmid CB047C11, complete sequence
          Length = 96428

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 157   aaacttcttgaagcactgc 175
             |||||||||||||||||||
Sbjct: 20775 aaacttcttgaagcactgc 20757
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>dbj|AK162658.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830147C21 product:BCL2-associated
            athanogene 4, full insert sequence
          Length = 4780

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 3    gaggagtgccctcatctga 21
            |||||||||||||||||||
Sbjct: 1157 gaggagtgccctcatctga 1139
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>dbj|AK010765.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
            clone:2410112I15 product:BCL2-associated athanogene 4,
            full insert sequence
          Length = 2126

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 3    gaggagtgccctcatctga 21
            |||||||||||||||||||
Sbjct: 1161 gaggagtgccctcatctga 1143
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>dbj|AK090261.1| Mus musculus 21 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:G630030A02 product:hypothetical
           protein, full insert sequence
          Length = 2293

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 3   gaggagtgccctcatctga 21
           |||||||||||||||||||
Sbjct: 755 gaggagtgccctcatctga 773
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 52      cgcgctttcctgcatctga 70
               |||||||||||||||||||
Sbjct: 1713130 cgcgctttcctgcatctga 1713112
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>gb|AC084440.1|AC084440 Caenorhabditis briggsae cosmid CB005K20, complete sequence
          Length = 105936

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 157   aaacttcttgaagcactgc 175
             |||||||||||||||||||
Sbjct: 20334 aaacttcttgaagcactgc 20316
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>gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y, complete sequence
          Length = 186504

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 74     gcaaactccaggttccaaa 92
              |||||||||||||||||||
Sbjct: 113145 gcaaactccaggttccaaa 113163
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>gb|AC079465.5| Homo sapiens chromosome 5 clone CTD-2124P24, complete sequence
          Length = 184585

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 154    ggcaaacttcttgaagcac 172
              |||||||||||||||||||
Sbjct: 133277 ggcaaacttcttgaagcac 133295
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>gb|AF041427.1|AF041427 Homo sapiens ribosomal protein s4 Y isoform gene, complete cds
          Length = 45859

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 74    gcaaactccaggttccaaa 92
             |||||||||||||||||||
Sbjct: 15418 gcaaactccaggttccaaa 15436
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>emb|AL929535.6| Zebrafish DNA sequence from clone CH211-151O1, complete sequence
          Length = 162436

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 42     cgctctcctccgcgctttc 60
              |||||||||||||||||||
Sbjct: 121186 cgctctcctccgcgctttc 121204
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>emb|AL824716.8| Mouse DNA sequence from clone RP23-277F20 on chromosome 4, complete
              sequence
          Length = 185441

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     tgacatcccacagccaaag 37
              |||||||||||||||||||
Sbjct: 174860 tgacatcccacagccaaag 174878


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,323,648
Number of Sequences: 3902068
Number of extensions: 1323648
Number of successful extensions: 87418
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87146
Number of HSP's gapped (non-prelim): 268
length of query: 188
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 166
effective length of database: 17,147,199,772
effective search space: 2846435162152
effective search space used: 2846435162152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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