Clone Name | rbasd18k13 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | B4GT2_MOUSE (Q9Z2Y2) Beta-1,4-galactosyltransferase 2 (EC 2.4.1.... | 31 | 4.1 | 2 | B4GT2_CRIGR (Q80WN9) Beta-1,4-galactosyltransferase 2 (EC 2.4.1.... | 30 | 6.9 | 3 | DAX1_HUMAN (P51843) Nuclear receptor 0B1 (Nuclear receptor DAX-1... | 30 | 6.9 | 4 | CSKI1_MOUSE (Q6P9K8) Caskin-1 (CASK-interacting protein 1) | 30 | 9.1 |
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>B4GT2_MOUSE (Q9Z2Y2) Beta-1,4-galactosyltransferase 2 (EC 2.4.1.-)| (Beta-1,4-GalTase 2) (Beta4Gal-T2) (b4Gal-T2) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 2) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 2) [Includes: L Length = 369 Score = 30.8 bits (68), Expect = 4.1 Identities = 20/51 (39%), Positives = 28/51 (54%) Frame = -2 Query: 591 TPAA*IWPASSSITSPSNPRANSVSAGLSIEIPLHPKHRPLEFGVVVDVVP 439 +PA ++PA+SS T+ S P A + S+GL P P RP G V+P Sbjct: 49 SPAHALYPAASSSTNCSRPNATAASSGL----PEVPSARP---GPTAPVIP 92
>B4GT2_CRIGR (Q80WN9) Beta-1,4-galactosyltransferase 2 (EC 2.4.1.-)| (Beta-1,4-GalTase 2) (Beta4Gal-T2) (b4Gal-T2) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 2) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 2) [Includes: L Length = 369 Score = 30.0 bits (66), Expect = 6.9 Identities = 20/51 (39%), Positives = 28/51 (54%) Frame = -2 Query: 591 TPAA*IWPASSSITSPSNPRANSVSAGLSIEIPLHPKHRPLEFGVVVDVVP 439 +PA ++PA+SS T+ S P A + S+GL P P RP G V+P Sbjct: 49 SPAHALYPAASSSTNCSRPNATASSSGL----PEVPSARP---GPTAPVIP 92
>DAX1_HUMAN (P51843) Nuclear receptor 0B1 (Nuclear receptor DAX-1) (DSS-AHC| critical region on the X chromosome protein 1) Length = 470 Score = 30.0 bits (66), Expect = 6.9 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -1 Query: 505 HRDPTAPETPPAGVWSCR*RGTRWHVTPPPSSAEPPGDCTRMLFPLCF 362 H P APE P G W R + + P A P G T +L+ CF Sbjct: 157 HVAPAAPEARPGGAWWDR---SYFAQRPGGKEALPGGRATALLYRCCF 201
>CSKI1_MOUSE (Q6P9K8) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 29.6 bits (65), Expect = 9.1 Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 12/74 (16%) Frame = -1 Query: 514 RPLHRDP-TAPETPPA------GVWSCR*RGTRWH-----VTPPPSSAEPPGDCTRMLFP 371 RP ++P T PE PP G + R R T + PPP AEPP L P Sbjct: 1153 RPKAKEPDTGPEPPPPLSVYQNGTATVRRRPTSEQAGPPELPPPPPPAEPPPADLMQLPP 1212 Query: 370 LCFATGRRRRHREP 329 L G R+ +P Sbjct: 1213 LPLPDGNARKPVKP 1226 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,654,778 Number of Sequences: 219361 Number of extensions: 2270166 Number of successful extensions: 6453 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 6062 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6448 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6856295237 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)