>EI2BD_SCHPO (Q09924) Probable translation initiation factor eIF-2B delta|
           subunit (eIF-2B GDP-GTP exchange factor)
          Length = 467

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 24/85 (28%), Positives = 36/85 (42%)
 Frame = -3

Query: 358 GSGAAEPGEDGRDQEPAHERSYAPSNGAGPAVAETREAPNSSGLECVPQRFFVSSCVVQL 179
           G  A +  +DG+DQ P  E S     G  PA A +  +PN   L     +  +     Q 
Sbjct: 2   GFSAEQAKKDGKDQSPVSESSSV--GGTSPATASSVVSPNEPKLSGKEAK-ALKKARKQA 58

Query: 178 AARGXGDA*EGTGPPGLRKXKCEAL 104
           + R   +A     PPG+ + K  A+
Sbjct: 59  SRRAKAEAAAANNPPGVSEEKKVAI 83

>UBP5_HUMAN (P45974) Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 5)
           (Ubiquitin-specific-processing protease 5)
           (Deubiquitinating enzyme 5) (Isopeptidase T)
          Length = 858

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +1

Query: 121 TFLGLEVPFLPMHRLSREQRVELRKRKQRNAEERTPVQTSWAPPLSPPPRVRLHWRG 291
           TFLG    ++  H     QRV L  R+ R  +E  P   +  PP   P R+ +   G
Sbjct: 49  TFLGFGKQYVERHFNKTGQRVYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEG 105

>LRP10_HUMAN (Q7Z4F1) Low-density lipoprotein receptor-related protein 10|
           precursor
          Length = 713

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 34/111 (30%), Positives = 43/111 (38%), Gaps = 14/111 (12%)
 Frame = -3

Query: 421 LINRTGLPVLHTELRFVMEPSGS--------------GAAEPGEDGRDQEPAHERSYAPS 284
           L+ RT  P   +E R  + PS +              G A  G+DG    P   ++  PS
Sbjct: 565 LLPRTNTPARASEARSQVTPSAAPLEALDGGTGPAREGGAVGGQDGEQAPPLPIKAPLPS 624

Query: 283 NGAGPAVAETREAPNSSGLECVPQRFFVSSCVVQLAARGXGDA*EGTGPPG 131
               PA     EAP    L  +P    + S VVQ A RG        GPPG
Sbjct: 625 ASTSPAPTTVPEAPGP--LPSLPLEPSLLSGVVQ-ALRGR--LLPSLGPPG 670

>TRFL_CAMDR (Q9TUM0) Lactotransferrin precursor (EC 3.4.21.-) (Lactoferrin)|
          Length = 708

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
 Frame = -3

Query: 280 GAGPAVAETREAPNSSGLECV--PQRFFVSSCVVQLA 176
           G  P +AE++++P SSGL+CV  P + +++  VV+ A
Sbjct: 425 GLVPVLAESQQSPESSGLDCVHRPVKGYLAVAVVRKA 461

>GCFC_HUMAN (Q9Y5B6) GC-rich sequence DNA-binding factor homolog|
          Length = 917

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 169 REQRVELRKRKQRNAEERTPVQTSWAPPLSPPP 267
           + +RV +RKR     EER   +    PPL PPP
Sbjct: 4   KARRVNVRKRNDSEEEERERDEEQEPPPLLPPP 36

>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)|
           (Forkhead-related transcription factor 3) (FREAC-3)
          Length = 553

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +3

Query: 228 SPDELGASLVSATAGPAPLEGA*ERSWAGSWSRPSSPGSAAPEPDGS 368
           SPD   +SL S ++ P  L  A   S  G+ S P  P  +AP P  S
Sbjct: 259 SPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHS 305

>KDSA_BRAJA (Q89KV0) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55)|
           (Phospho-2-dehydro-3-deoxyoctonate aldolase)
           (3-deoxy-D-manno-octulosonic acid 8-phosphate
           synthetase) (KDO-8-phosphate synthetase) (KDO 8-P
           synthase) (KDOPS)
          Length = 282

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
 Frame = -3

Query: 421 LINRTGLPVLHTELRFVMEPSGSGAAEPGEDGRDQEPAHERSYAPSNGAGPAVAETREAP 242
           L   TG PV+      V +P G G +  GE  R+  P   R+ A + G      ET   P
Sbjct: 192 LARTTGAPVIFDATHSVQQPGGKGTSSGGE--REFVPVLARA-AVAVGVAGVFIETHPDP 248

Query: 241 NSS---GLECVPQRFF 203
           +S+   G   VP R F
Sbjct: 249 DSAPSDGPNMVPLREF 264

>RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2|
          Length = 1514

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3

Query: 376 FVMEPSGSGAAEPGEDGRDQEPAHERSYAPSNGAGPAVAETREAPNSS 233
           F  + SG GA   G +     P+   SY+P   AGP  + T  + ++S
Sbjct: 748 FTSQASGRGARNAGPEPETSRPSPLGSYSPVRSAGPFGSSTDSSASTS 795

>TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 100 kDa subunit)
           (TAF(II)100) (TAFII-100) (TAFII100)
          Length = 801

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +3

Query: 255 VSATAGPAPLEGA*ERSWAGSWSR--PSSPGSAAPEPDGSITNRNSV 389
           V+ +  P  L+GA   + +   SR   S PGSAAPEP G+  +  SV
Sbjct: 128 VAGSGAPGELDGAGAEAASALLSRVTASVPGSAAPEPPGTGASVTSV 174

>DPCA2_HUMAN (Q86SG4) Dresden prostate carcinoma 2 protein (D-PCa-2)|
          Length = 172

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 9/49 (18%)
 Frame = +1

Query: 172 EQRVELRKRKQRNAEE---------RTPVQTSWAPPLSPPPRVRLHWRG 291
           ++R+E+ K +Q   EE         R P+ +++ PPLS PP  R   +G
Sbjct: 30  QKRIEMHKAEQCEEEEAMTPRPTKARAPLPSAYVPPLSLPPCPRERLKG 78

>ZP1_HUMAN (P60852) Zona pellucida sperm-binding protein 1 precursor (Zona|
           pellucida glycoprotein 1) (Zp-1)
          Length = 638

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 130 GLEVPFLPMHRLSREQRVELRKRKQRNAEERTPVQTSWAPPLSPPP 267
           G+ +   P   ++R+   +L  R   NA +  P+Q S  PP SP P
Sbjct: 353 GIHIQKGPQGSITRDSTFQLHVRCVFNASDFLPIQASIFPPPSPAP 398

>PIRK5_CHICK (Q5ZIB8) Phosphoinositide 3-kinase regulatory subunit 5 (PI3-kinase|
           regulatory subunit 5)
          Length = 881

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
 Frame = -3

Query: 571 FRLPVQRAPRQPA----HPGPSPSIGSVPLLQTTTEQTTGRFFQTN*LSEV*REL---IN 413
           F +PV+R+   PA    HP PSPS   +  L        G    TN +S     L     
Sbjct: 565 FYVPVKRSCLLPAALLMHPPPSPSDLQLRALAQAEPTLAGAESSTNDISHYIGMLDPWYE 624

Query: 412 RTGLPVLHTELRFVMEPSGSGAAEPGEDGRDQEP 311
           R  L +++  +  + + S    AEP ED R+Q P
Sbjct: 625 RNVLGLMNLPMDVLCQ-SAKPEAEPQEDSREQLP 657

>KDSA_RHOPA (P61657) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55)|
           (Phospho-2-dehydro-3-deoxyoctonate aldolase)
           (3-deoxy-D-manno-octulosonic acid 8-phosphate
           synthetase) (KDO-8-phosphate synthetase) (KDO 8-P
           synthase) (KDOPS)
          Length = 287

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = -3

Query: 409 TGLPVLHTELRFVMEPSGSGAAEPGEDGRDQEPAHERSYAPSNGAGPAVAETREAPN--- 239
           TG PV+      V +P G G +  GE  R+  P   R+ A + G      ET   P+   
Sbjct: 196 TGAPVIFDATHSVQQPGGKGTSSGGE--REYVPVLARA-AVAVGVAGVFIETHPDPDHAP 252

Query: 238 SSGLECVPQRFF 203
           S G   VP R F
Sbjct: 253 SDGPNMVPLREF 264

>SLA1_YEAST (P32790) Cytoskeleton assembly control protein SLA1|
          Length = 1244

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 160 RLSREQRVELRKRKQRNAEERTPVQTSWAPPLSPP 264
           RL   +  EL+K ++   EER+ +Q    PP+ PP
Sbjct: 592 RLKERELYELKKARELLDEERSRLQEKELPPIKPP 626

>PKNH_MYCTU (Q11053) Probable serine/threonine-protein kinase pknH (EC|
           2.7.11.1)
          Length = 626

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 400 PVLHTELRFVMEPSGSGAAEPGEDGRDQEPAHERSYAPSNGAGPAVAET 254
           PV    ++   +PS +  A+PG  G+   P  + S+AP++G  PA   T
Sbjct: 322 PVTPPGVQPAPKPSYTPPAQPGPAGQRPGPTGQPSWAPNSGPMPASGPT 370

>DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysine-79 specific|
            (EC 2.1.1.43) (Histone H3-K79 methyltransferase)
            (H3-K79-HMTase) (DOT1-like protein)
          Length = 1739

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +3

Query: 243  GASLVSATAGPAPLEGA*ERSWAGSWSRPSSPGSAAPEP 359
            GA+  SAT GP+PL+ A   S A S+  P+S  +  P P
Sbjct: 1558 GAACGSATLGPSPLQAAASAS-ASSFQAPASVETRPPPP 1595

>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)|
          Length = 939

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 29/97 (29%), Positives = 36/97 (37%), Gaps = 9/97 (9%)
 Frame = -3

Query: 361 SGSGAAEPGEDGRDQEPAHERSYAPSNGAGPAVAETREA--PNSSGLECVPQ-----RFF 203
           SG+GA  PG   +D+ P H         AGP    +  A  P S      P+     R  
Sbjct: 105 SGAGADSPGPPRQDRGPLHGAPSTALRPAGPGQGRSSPAWEPRSPRCPSGPEPPEDPRGA 164

Query: 202 VSS--CVVQLAARGXGDA*EGTGPPGLRKXKCEALKP 98
            SS      L +R  G A +G G  G  K     L P
Sbjct: 165 RSSQGAACPLMSRPEGKAGDGCGTAGAHKGPPRGLSP 201

>MBA2_ECOLI (P07112) Mobilization protein A|
          Length = 708

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -3

Query: 343 EPGEDGRDQEPAHERSYAPSNGAGPAVAETREAPNSSGLECVPQR 209
           E G+ GR     HE   A   GAG  VAE+  AP+  G+    QR
Sbjct: 274 EHGDTGRRSPAGHEPDPAGQRGAGGGVAES-PAPDRGGMGGAGQR 317

>NLE1_PONPY (Q5RFF8) Notchless homolog 1|
          Length = 484

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 503 RTNGG*RTWVSGLSWGPLDWKPE 571
           RT  G   W++GLSW PL   PE
Sbjct: 192 RTLAGHSKWITGLSWEPLHANPE 214

>NLE1_MOUSE (Q8VEJ4) Notchless homolog 1|
          Length = 484

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 503 RTNGG*RTWVSGLSWGPLDWKPE 571
           RT  G   W++GLSW PL   PE
Sbjct: 192 RTLTGHSKWITGLSWEPLHMNPE 214

>NLE1_HUMAN (Q9NVX2) Notchless homolog 1|
          Length = 484

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 503 RTNGG*RTWVSGLSWGPLDWKPE 571
           RT  G   W++GLSW PL   PE
Sbjct: 192 RTLAGHSKWITGLSWEPLHANPE 214

>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor|
          Length = 1356

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -3

Query: 364 PSGSGAAEPGEDGRDQEPAHERSYAPSNGAGPAVAETREAPNSSGL 227
           P+GS A +PGEDG +  P       P +  GP     R  P + GL
Sbjct: 128 PTGS-AGKPGEDGNNGRPG-----KPGDRGGPGTQGARGFPGTPGL 167

>CD2L6_HUMAN (Q9BWU1) Cell division cycle 2-like protein kinase 6 (EC 2.7.11.22)|
           (CDC2-related protein kinase 6) (Death-preventing
           kinase) (Cyclin-dependent kinase 11)
          Length = 502

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = +1

Query: 124 FLGLEVPFLPMHRLSR---EQRVELRKRKQRNAEER--TPVQTSWAPPLSPPPR 270
           F G ++P+     L+    E++ +  +++Q+N  ++   P Q + APP +PPP+
Sbjct: 346 FAGCQIPYPKREFLNEDDPEEKGDKNQQQQQNQHQQPTAPPQQAAAPPQAPPPQ 399


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,115,634
Number of Sequences: 219361
Number of extensions: 1729334
Number of successful extensions: 7683
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7661
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)