ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18k01 |
|---|---|
| Clone Library Name | barley_pub |
>GPSN2_RAT (Q64232) Synaptic glycoprotein SC2| Length = 308 Score = 53.5 bits (127), Expect(2) = 5e-12 Identities = 32/76 (42%), Positives = 39/76 (51%) Frame = -1 Query: 589 PRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRLRKLFD 410 P +LF +V+C NYT E+ W+GF I TQ V +F V MT WA GKH K F Sbjct: 235 PFTWLFLLVSCPNYTYEVGSWIGFAIMTQCVPVALFSLVGFTQMTIWAKGKHRSYLKEF- 293 Query: 409 GKDGRPKYPRRWVILP 362 R P R I+P Sbjct: 294 ----RDYPPLRMPIIP 305 Score = 37.0 bits (84), Expect(2) = 5e-12 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = -3 Query: 701 QMKIGFGIGVVCQIANFYCHILLRNLKEP-DRQRRLPDPTGLP 576 Q+K+ I V+CQ+ NF H+ LR+L+ + R++P PT P Sbjct: 193 QVKLALAIFVICQLGNFSIHMALRDLRPAGSKTRKIPYPTKNP 235
>GPSN2_MOUSE (Q9CY27) Synaptic glycoprotein SC2| Length = 308 Score = 53.5 bits (127), Expect(2) = 7e-12 Identities = 32/76 (42%), Positives = 39/76 (51%) Frame = -1 Query: 589 PRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRLRKLFD 410 P +LF +V+C NYT E+ W+GF I TQ V +F V MT WA GKH K F Sbjct: 235 PFTWLFLLVSCPNYTYEVGSWIGFAILTQCVPVALFSLVGFTQMTIWAKGKHRSYLKEF- 293 Query: 409 GKDGRPKYPRRWVILP 362 R P R I+P Sbjct: 294 ----RDYPPLRMPIIP 305 Score = 36.6 bits (83), Expect(2) = 7e-12 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = -3 Query: 701 QMKIGFGIGVVCQIANFYCHILLRNLKEP-DRQRRLPDPTGLP 576 Q+K+ + V+CQ+ NF H+ LR+L+ + R++P PT P Sbjct: 193 QVKLALAVFVICQLGNFSIHMALRDLRPAGSKTRKIPYPTKNP 235
>GPSN2_HUMAN (Q9NZ01) Synaptic glycoprotein SC2| Length = 308 Score = 52.4 bits (124), Expect(2) = 1e-11 Identities = 31/76 (40%), Positives = 39/76 (51%) Frame = -1 Query: 589 PRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRLRKLFD 410 P +LF +V+C NYT E+ W+GF I TQ + +F V MT WA GKH K F Sbjct: 235 PFTWLFLLVSCPNYTYEVGSWIGFAIMTQCLPVALFSLVGFTQMTIWAKGKHRSYLKEF- 293 Query: 409 GKDGRPKYPRRWVILP 362 R P R I+P Sbjct: 294 ----RDYPPLRMPIIP 305 Score = 37.0 bits (84), Expect(2) = 1e-11 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = -3 Query: 701 QMKIGFGIGVVCQIANFYCHILLRNLKEP-DRQRRLPDPTGLP 576 Q+K+ I V+CQ+ NF H+ LR+L+ + R++P PT P Sbjct: 193 QVKLALAIFVICQLGNFSIHMALRDLRPAGSKTRKIPYPTKNP 235
>S5A1_MACFA (Q28891) 3-oxo-5-alpha-steroid 4-dehydrogenase 1 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 1) (SR type 1) Length = 263 Score = 50.4 bits (119), Expect(2) = 5e-08 Identities = 30/82 (36%), Positives = 42/82 (51%) Frame = -1 Query: 598 YQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRLRK 419 Y+IPRG LF VT ANY EI +W G+ +A+ +V G F ++ A H + Sbjct: 187 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKEHHRWYLQ 246 Query: 418 LFDGKDGRPKYPRRWVILPPFL 353 F+ +YP+ IL PFL Sbjct: 247 KFE------EYPKFRKILIPFL 262 Score = 26.6 bits (57), Expect(2) = 5e-08 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -3 Query: 707 DLQMKIGFGIGVVCQIANFYCHILLRNLKEP 615 D + IGFG+ + + N + +LRNL++P Sbjct: 152 DPRFLIGFGLWLAGMLINIHSDHILRNLRKP 182
>S5A1_HUMAN (P18405) 3-oxo-5-alpha-steroid 4-dehydrogenase 1 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 1) (SR type 1) (S5AR) Length = 259 Score = 50.4 bits (119), Expect(2) = 5e-08 Identities = 29/82 (35%), Positives = 42/82 (51%) Frame = -1 Query: 598 YQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRLRK 419 Y+IPRG LF VT ANY EI +W G+ +A+ +V G F ++ A H + Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKEHHEWYLR 242 Query: 418 LFDGKDGRPKYPRRWVILPPFL 353 F+ +YP+ I+ PFL Sbjct: 243 KFE------EYPKFRKIIIPFL 258 Score = 26.6 bits (57), Expect(2) = 5e-08 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -3 Query: 707 DLQMKIGFGIGVVCQIANFYCHILLRNLKEP 615 D + IGFG+ + + N + +LRNL++P Sbjct: 148 DPRFLIGFGLWLTGMLINIHSDHILRNLRKP 178
>S5A1_RAT (P24008) 3-oxo-5-alpha-steroid 4-dehydrogenase 1 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 1) (SR type 1) Length = 259 Score = 50.1 bits (118), Expect(2) = 4e-07 Identities = 28/82 (34%), Positives = 42/82 (51%) Frame = -1 Query: 598 YQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRLRK 419 Y+IPRG LF V+ ANY E+ +W GF +A+ ++ G VF + + A H + Sbjct: 183 YKIPRGGLFEYVSAANYFGELVEWCGFALASWSLQGVVFALFTLSTLLTRAKQHHQWYHE 242 Query: 418 LFDGKDGRPKYPRRWVILPPFL 353 F+ YP+ IL PF+ Sbjct: 243 KFE------DYPKSRKILIPFV 258 Score = 23.9 bits (50), Expect(2) = 4e-07 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = -3 Query: 689 GFGIGVVCQIANFYCHILLRNLKEP 615 GF + +V + N + +LRNL++P Sbjct: 154 GFALWLVGMVINIHSDHILRNLRKP 178
>S5A2_RAT (P31214) 3-oxo-5-alpha-steroid 4-dehydrogenase 2 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 2) (SR type 2) (5 alpha-SR2) Length = 254 Score = 48.1 bits (113), Expect = 3e-05 Identities = 29/82 (35%), Positives = 42/82 (51%) Frame = -1 Query: 598 YQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRLRK 419 Y+IPRG LF V+ AN+ EI +W+G+ +AT +V + F + A H K Sbjct: 178 YRIPRGGLFTYVSGANFLGEIIEWIGYALATWSVPAFAFAFFTLCFLGMQAFYHHRFYLK 237 Query: 418 LFDGKDGRPKYPRRWVILPPFL 353 +F KD YP+ L PF+ Sbjct: 238 MF--KD----YPKSRKALIPFI 253
>S5A2_MOUSE (Q99N99) 3-oxo-5-alpha-steroid 4-dehydrogenase 2 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 2) (SR type 2) (5 alpha-SR2) Length = 254 Score = 46.6 bits (109), Expect = 7e-05 Identities = 28/82 (34%), Positives = 42/82 (51%) Frame = -1 Query: 598 YQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRLRK 419 Y+IP+G LF V+ AN+ EI +W+G+ +AT +V + F + A H K Sbjct: 178 YRIPQGGLFTYVSGANFLGEIIEWMGYALATWSVPAFAFAFFTLCFLGMQAFYHHRFYLK 237 Query: 418 LFDGKDGRPKYPRRWVILPPFL 353 +F KD YP+ L PF+ Sbjct: 238 MF--KD----YPKSRKALIPFI 253
>S5A2_MACFA (Q28892) 3-oxo-5-alpha-steroid 4-dehydrogenase 2 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 2) (SR type 2) (5 alpha-SR2) Length = 254 Score = 45.1 bits (105), Expect = 2e-04 Identities = 25/82 (30%), Positives = 41/82 (50%) Frame = -1 Query: 598 YQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRLRK 419 Y+IP+G LF V+ AN+ EI +W+G+ +AT ++ F + + A H K Sbjct: 178 YRIPKGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSVCFLGLRAFHHHRFYLK 237 Query: 418 LFDGKDGRPKYPRRWVILPPFL 353 +F+ YP+ L PF+ Sbjct: 238 MFE------DYPKSRKALIPFI 253
>S5A2_HUMAN (P31213) 3-oxo-5-alpha-steroid 4-dehydrogenase 2 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 2) (SR type 2) (5 alpha-SR2) (Type II 5-alpha reductase) Length = 254 Score = 44.3 bits (103), Expect = 4e-04 Identities = 25/82 (30%), Positives = 41/82 (50%) Frame = -1 Query: 598 YQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRLRK 419 Y+IP+G LF V+ AN+ EI +W+G+ +AT ++ F + + A H K Sbjct: 178 YRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCFLGLRAFHHHRFYLK 237 Query: 418 LFDGKDGRPKYPRRWVILPPFL 353 +F+ YP+ L PF+ Sbjct: 238 MFE------DYPKSRKALIPFI 253
>S5A2_PIG (O18765) 3-oxo-5-alpha-steroid 4-dehydrogenase 2 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 2) (SR type 2) (5 alpha-SR2) Length = 254 Score = 43.9 bits (102), Expect = 5e-04 Identities = 25/82 (30%), Positives = 41/82 (50%) Frame = -1 Query: 598 YQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRLRK 419 Y+IP+G LF V+ AN+ EI +W+G+ +AT ++ F + + A H K Sbjct: 178 YKIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCFLGLRAFHHHRFYVK 237 Query: 418 LFDGKDGRPKYPRRWVILPPFL 353 +F+ YP+ L PF+ Sbjct: 238 MFE------DYPKSRKALIPFI 253
>DET2_ARATH (Q38944) Probable steroid reductase DET2 (EC 1.3.99.-)| Length = 262 Score = 41.6 bits (96), Expect = 0.002 Identities = 25/82 (30%), Positives = 38/82 (46%) Frame = -1 Query: 598 YQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRLRK 419 Y IPRG F +V+C NY E +WLG+ + T + AG F + + A H Sbjct: 185 YVIPRGGWFELVSCPNYFGEAIEWLGWAVMTWSWAGIGFFLYTCSNLFPRARASHKWYIA 244 Query: 418 LFDGKDGRPKYPRRWVILPPFL 353 F + +YP+ + PF+ Sbjct: 245 KF-----KEEYPKTRKAVIPFV 261
>DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)| Length = 859 Score = 36.6 bits (83), Expect = 0.077 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 13/94 (13%) Frame = -2 Query: 705 PADEDWVRHRGRVP------DRKLLLPHPAEEP---QGARPAAAATRSHGASCSTS*HAQ 553 P D+ W++H R P R+ L P P +G PA + H + Sbjct: 747 PVDDSWIQHSRRSPPPSPTTQRRPTLSAPLARPTSGRGPAPAIPSPGPHSGAPPVPFRPG 806 Query: 552 TTPPRSTNGSGSTSPP----RPWRVTSSLPWRRP 463 PP ++ +PP RP R S+P RRP Sbjct: 807 PLPPFPSSSDSFGAPPQVPSRPTRAPPSVPSRRP 840
>IF2_SYMTH (Q67P86) Translation initiation factor IF-2| Length = 1044 Score = 34.7 bits (78), Expect = 0.29 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Frame = -2 Query: 666 PDRKLLLPHP---AEEPQGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPP 505 P++ P P AE+ Q A PAAA + G + T+ AQ P R+ G+G++S P Sbjct: 202 PEKAGAAPVPGAVAEQKQAATPAAAEQKPAGKAEQTAGAAQAKPARAEAGTGASSRP 258
>NRG3_HUMAN (P56975) Pro-neuregulin-3, membrane-bound isoform precursor| (Pro-NRG3) [Contains: Neuregulin-3 (NRG-3)] Length = 720 Score = 33.5 bits (75), Expect = 0.65 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -2 Query: 636 AEEPQGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWRVTSSLPWRR 466 A P GA AAAA+ G + + + A P G G+ PPR R + + W R Sbjct: 7 AASPPGAASAAAASAEEGTAAAAAAAAAGGGPDG-GGEGAAEPPRELRCSDCIVWNR 62
>DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)| Length = 848 Score = 32.7 bits (73), Expect = 1.1 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 13/90 (14%) Frame = -2 Query: 705 PADEDWVRHRGRVP------DRKLLLPHPAEEP---QGARPAAAATRSHGASCSTS*HAQ 553 P D+ W++H R P R+L L P P +G PA + H + Sbjct: 747 PVDDSWLQHSRRSPPPSPTTQRRLTLSAPLPRPASSRGPAPAIPSPGPHSGAPPVPFRPG 806 Query: 552 TTPPRSTNGSGSTSPP----RPWRVTSSLP 475 PP + +PP RP R S+P Sbjct: 807 PLPPFPNSSDSYGAPPQVPSRPTRAPPSVP 836
>SYP2L_MOUSE (Q8BWB1) Synaptopodin 2-like protein| Length = 975 Score = 32.7 bits (73), Expect = 1.1 Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 2/96 (2%) Frame = -2 Query: 666 PDRKLLLPHPAEEPQGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSP-PRPWRV 490 PD +P P+ + ARP + + ++ P + G GSTSP P P+ Sbjct: 449 PDGGAPIPAPSIFNRSARPFTPGLQGQRSGTTSVIFRPLAPKKVNEGLGSTSPAPSPFAA 508 Query: 489 TSSLPWRRPS*PTGRLESTAA*G-SCSTGRMGGPST 385 P PS T T G S ST R GP T Sbjct: 509 PPQGPTPLPSFTTVVPSHTPVSGASSSTQRSSGPVT 544
>NRG3_MOUSE (O35181) Pro-neuregulin-3, membrane-bound isoform precursor| (Pro-NRG3) [Contains: Neuregulin-3 (NRG-3)] Length = 713 Score = 32.3 bits (72), Expect = 1.5 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -2 Query: 627 PQGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWRVTSSLPWRR 466 P GA AAAA+ G + + + A P G G+ PPR R + + W R Sbjct: 10 PPGAASAAAASAEEGTAAAAAAAAAGGGPDG-GGEGAAEPPRELRCSDCIVWNR 62
>ACES_CHICK (P36196) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)| Length = 767 Score = 32.3 bits (72), Expect = 1.5 Identities = 22/64 (34%), Positives = 29/64 (45%) Frame = -2 Query: 672 RVPDRKLLLPHPAEEPQGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWR 493 RVP R PH E P A A + ++GA + H T P + G+ PPRP R Sbjct: 417 RVPPR----PHRDETPPDAYGAKGSADAYGAKAAPRPHRDETSP---DAYGAKMPPRPHR 469 Query: 492 VTSS 481 +S Sbjct: 470 DEAS 473
>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 1734 Score = 31.6 bits (70), Expect = 2.5 Identities = 18/44 (40%), Positives = 21/44 (47%) Frame = -2 Query: 639 PAEEPQGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSP 508 P PQG R A A S G + S S ++ P S GSG T P Sbjct: 1211 PRSPPQGYRVAPDAVHSVGGNSSQSSSPSSSVPSSPAGSGHTRP 1254
>CR1_HORVU (P23251) Cold-regulated protein 1 (Fragment)| Length = 127 Score = 31.6 bits (70), Expect = 2.5 Identities = 30/94 (31%), Positives = 37/94 (39%), Gaps = 18/94 (19%) Frame = -2 Query: 681 HRGRVPDRKLLLPHPAEEPQGARPA----------------AAATRSHGA--SCSTS*HA 556 HR PDR LLLP +EE +G P+ A T S GA +C Sbjct: 21 HRPPDPDRWLLLPCCSEEARGPPPSPAPLPARLFPGRASSPLARTPSAGAASACKPLLER 80 Query: 555 QTTPPRSTNGSGSTSPPRPWRVTSSLPWRRPS*P 454 TP R +T R R+ + PWR P P Sbjct: 81 LPTPSRRRRRRRATRRARS-RMPRTTPWRAPRAP 113
>SYP2L_HUMAN (Q9H987) Synaptopodin 2-like protein| Length = 977 Score = 31.6 bits (70), Expect = 2.5 Identities = 24/87 (27%), Positives = 35/87 (40%) Frame = -2 Query: 645 PHPAEEPQGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWRVTSSLPWRR 466 P P+ + ARP + + ++ P R+ + G SP P ++S P Sbjct: 459 PAPSIFNRSARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLGGLSPAPPPFLSSQGPTPL 518 Query: 465 PS*PTGRLESTAA*GSCSTGRMGGPST 385 PS +G GS ST R GP T Sbjct: 519 PSFTSGVPSHAPVSGSPSTPRSSGPVT 545
>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Plakophilin-related armadillo repeat protein-interacting PDZ protein) Length = 2766 Score = 30.8 bits (68), Expect = 4.2 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Frame = -2 Query: 585 GASCSTS*HAQ------TTPPRSTNGSGSTSPPRPWRVTSSL 478 GA S+S HAQ T+ PR T G+GS PP+ W + S+ Sbjct: 1384 GAGSSSSHHAQMVRSDQTSSPRKTGGTGS-PPPQQWALQPSV 1424
>MYPT1_RAT (Q10728) Protein phosphatase 1 regulatory subunit 12A (Myosin| phosphatase-targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit) (MBSP) (Serine/threonine protein phosphatase PP1 smooth muscle reg Length = 1032 Score = 30.8 bits (68), Expect = 4.2 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = -2 Query: 630 EPQGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWRVTSS 481 E +P A+ T +H AS + A TTP S+N TSP + + +++ Sbjct: 370 ETDKTKPMASVTNAHTASTQAAPAAVTTPTLSSNQGTPTSPVKKFPTSTT 419
>PTPA1_ASPOR (Q2UN27) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 478 Score = 26.6 bits (57), Expect(2) = 4.3 Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 7/62 (11%) Frame = -2 Query: 639 PAEEPQGARPAAAATRSHGASCSTS*HAQTTPPRST-------NGSGSTSPPRPWRVTSS 481 P P+ P+A G + +Q+TPP ST PP R+ S+ Sbjct: 375 PETRPRQVPPSARQDPGPGTKAPWATASQSTPPPSTGTAAPWATSRAGREPPTTSRIPSA 434 Query: 480 LP 475 LP Sbjct: 435 LP 436 Score = 22.7 bits (47), Expect(2) = 4.3 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 3/31 (9%) Frame = -3 Query: 431 PPEEAVRREGWAAQVPS---PMGDPSSIPVK 348 P A R WA+ P+ P GDP+ I K Sbjct: 443 PGPMAPTRAPWASSQPAGPAPTGDPNDITTK 473
>GRIK5_HUMAN (Q16478) Glutamate receptor, ionotropic kainate 5 precursor| (Glutamate receptor KA-2) (KA2) (Excitatory amino acid receptor 2) (EAA2) Length = 980 Score = 30.4 bits (67), Expect = 5.5 Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Frame = -2 Query: 666 PDRKLLLPHPAEEPQGARPAAAATRSHGASCSTS*HAQT-------TPPRSTN-GSGSTS 511 P R L P P P GARPAA +H C Q PPR + +TS Sbjct: 906 PQRLLDDPGP---PSGARPAAPTPCTHVRVCQECRRIQALRASGAGAPPRGLGVPAEATS 962 Query: 510 PPRP 499 PPRP Sbjct: 963 PPRP 966
>DEDD2_MOUSE (Q8QZV0) DNA-binding death effector domain-containing protein 2| (FADD-like anti-apoptotic molecule 3) (DED-containing protein FLAME-3) Length = 330 Score = 30.4 bits (67), Expect = 5.5 Identities = 26/81 (32%), Positives = 36/81 (44%) Frame = -2 Query: 672 RVPDRKLLLPHPAEEPQGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWR 493 RV R LLPH A + + RP + S+G S+S + + R S S+ P+ Sbjct: 91 RVLARHDLLPHLARKRR--RPVSPERYSYGNPSSSSKRTEDSCRRRRQASSSSDSPQSQW 148 Query: 492 VTSSLPWRRPS*PTGRLESTA 430 T S P +R GR S A Sbjct: 149 DTGSPPTKRQRRSRGRPSSGA 169
>RNFD_BUCBP (Q89AW7) Electron transport complex protein rnfD| Length = 354 Score = 30.4 bits (67), Expect = 5.5 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = -1 Query: 583 GFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAI-MTNWALGKHSRLRKLFD 410 G F+IV +IY LG NI + GY L V+ I MTNW+ ++S LFD Sbjct: 100 GAFFSIVIAK----QIYGGLGNNIFNPAMTGYSILLVSFPILMTNWSF-QNSSYFNLFD 153
>HXB3_MOUSE (P09026) Homeobox protein Hox-B3 (Hox-2.7) (MH-23)| Length = 433 Score = 30.0 bits (66), Expect = 7.2 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 1/87 (1%) Frame = -2 Query: 651 LLPHPAEEPQGARPAAAA-TRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWRVTSSLP 475 L P P P G+ P +AA T + S + +++ PP+ GS ST P Sbjct: 78 LAPEPLPAPPGSPPPSAAPTSTTSNSNNGGGPSKSGPPKCGAGSNST------LTKQIFP 131 Query: 474 WRRPS*PTGRLESTAA*GSCSTGRMGG 394 W + S T +L++++ + G GG Sbjct: 132 WMKESRQTSKLKNSSPGTAEGCGGGGG 158
>AGRN_HUMAN (O00468) Agrin precursor| Length = 2045 Score = 29.6 bits (65), Expect = 9.4 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = -2 Query: 654 LLLPHPAEEPQGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRP--WRVTSS 481 LLL P GA P A ++ +H +QTTPP S+ + S PR W V + Sbjct: 991 LLLSQALPAPPGALPLAPSSTAH---------SQTTPPPSSRPRTTASVPRTTVWPVL-T 1040 Query: 480 LPWRRPS*PTGRLESTAA*GSCST 409 +P PS P L ++A S ST Sbjct: 1041 VPPTAPS-PAPSLVASAFGESGST 1063
>TBC16_HUMAN (Q8TBP0) TBC1 domain family member 16| Length = 767 Score = 29.6 bits (65), Expect = 9.4 Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 8/77 (10%) Frame = -2 Query: 705 PADEDWVRHRGRVPDRKLLLPHPAEEPQ--------GARPAAAATRSHGASCSTS*HAQT 550 P DED + VPDR L P P +E + GA+PA+ +CS S T Sbjct: 136 PKDEDILVVAQSVPDRMLASPAPEDEEKLAQGLGVDGAQPASQ------PACSPSGILST 189 Query: 549 TPPRSTNGSGSTSPPRP 499 P+ G PRP Sbjct: 190 VSPQDVTEEG--REPRP 204
>SCMH1_MOUSE (Q8K214) Polycomb protein SCMH1 (Sex comb on midleg homolog 1)| Length = 706 Score = 29.6 bits (65), Expect = 9.4 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 2/85 (2%) Frame = -2 Query: 684 RHRGRVPDRKLLLPHPAEEPQGARPAAAATRSHGASCSTS*HAQT--TPPRSTNGSGSTS 511 + RGR P K+L+PHP P + + G + +T +PP + S +TS Sbjct: 278 KKRGRTP--KILIPHPTSTPSKSAEPLKFPKKRGPKPGSKRKPRTLLSPPPT---SPTTS 332 Query: 510 PPRPWRVTSSLPWRRPS*PTGRLES 436 P P TS++P + P+ +++ Sbjct: 333 TPEP--DTSTVPQDAATVPSSAMQA 355 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 110,968,329 Number of Sequences: 219361 Number of extensions: 2496974 Number of successful extensions: 7555 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 7017 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7536 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7139613222 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
