ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18k01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106269.1| Zea mays PCO138212 mRNA sequence 414 e-112
2gb|BT018162.1| Zea mays clone EL01N0556D07.c mRNA sequence 373 e-100
3ref|XM_550155.1| Oryza sativa (japonica cultivar-group), mRNA 254 3e-64
4dbj|AK066325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 3e-64
5dbj|AK060948.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 3e-64
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 204 3e-49
7dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic D... 204 3e-49
8dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic D... 204 3e-49
9ref|NM_115394.2| Arabidopsis thaliana CER10/ECR; 3-oxo-5-alpha-s... 96 2e-16
10gb|BT012066.1| Arabidopsis thaliana At3g55360 mRNA sequence 96 2e-16
11gb|AY081583.1| Arabidopsis thaliana glycoprotein-like (T22E16.2)... 96 2e-16
12gb|AY065136.1| Arabidopsis thaliana glycoprotein-like (T22E16.2)... 96 2e-16
13emb|BX826269.1|CNS0A4Y2 Arabidopsis thaliana Full-length cDNA Co... 96 2e-16
14emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, B... 94 7e-16
15gb|AY088452.1| Arabidopsis thaliana clone 6774 mRNA, complete se... 88 5e-14
16emb|AJ515556.1|CAR515556 Cicer arietinum mRNA for steroid 5-alph... 50 0.010
17ref|XM_370036.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 2.5
18gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 42 2.5
19gb|AE004700.1| Pseudomonas aeruginosa PAO1, section 261 of 529 o... 42 2.5
20gb|AY946230.1| Hordeum vulgare subsp. vulgare 3' flanking sequen... 42 2.5
21gb|U48208.1|HIV1U48208 Human immunodeficiency virus type 1 clone... 42 2.5
22gb|L36679.1|AMLUNA Amycolatopsis methanolica plasmid pMEA300 stf... 42 2.5
23gb|M75151.1|RATDNA Rattus norvegicus DNA 42 2.5
24gb|AC152117.2| Pichia stipitis clone JGIAHYZ-5A1, complete sequence 40 9.7
25gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 9.7
26ref|XM_473416.1| Oryza sativa (japonica cultivar-group), predic... 40 9.7
27gb|AC119252.10| Mus musculus chromosome 8, clone RP24-279M13, co... 40 9.7
28emb|CR701735.2|CNS0G4ER Tetraodon nigroviridis full-length cDNA 40 9.7
29emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4,... 40 9.7
30emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in... 40 9.7
31gb|AC093258.2| Homo sapiens chromosome 5 clone RP11-1E3, complet... 40 9.7
32gb|AC148698.1| Macaca mulatta Major Histocompatibility Complex B... 40 9.7
33gb|AC148682.1| Macaca mulatta Major Histocompatibility Complex M... 40 9.7
34gb|AC146538.2| Gasterosteus aculeatus clone CH213-118G22, comple... 40 9.7
35dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
36dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia... 40 9.7
37gb|AC073624.28| Homo sapiens chromosome 17, clone RP11-537K14, c... 40 9.7
38gb|AC011750.8| Homo sapiens BAC clone RP11-458C9 from 2, complet... 40 9.7
39dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 9.7
40dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 9.7
41emb|AL935283.16| Zebrafish DNA sequence from clone CH211-247O1 i... 40 9.7
42gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 9.7 
>gb|AY106269.1| Zea mays PCO138212 mRNA sequence
          Length = 1343

 Score =  414 bits (209), Expect = e-112
 Identities = 327/365 (89%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                        
Query: 345  cttcttcacaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatcc 404
            |||||||||||||| ||||| || |||||||| ||||||||||||||||||| |||||||
Sbjct: 1223 cttcttcacaggaacggagggagaatcacccaccggcgagggtacttgggcctcccatcc 1164

                                                                        
Query: 405  ttcccgtcgaacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatg 464
            || ||||| ||||||||| |||| ||||||||||| || |||||||||||||||||||||
Sbjct: 1163 ttgccgtcaaacagcttcttcagacggctgtgcttgccgagcgcccagttggtcatgatg 1104

                                                                        
Query: 465  gccgccgccacggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccg 524
             ||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| |||
Sbjct: 1103 cccgccgccacgacaaggaagacgtaacctgccacggtctgtgtggcgatgttgaagccg 1044

                                                                        
Query: 525  agccattggtagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccc 584
            | ||| |||||||||||||||||||| || ||||| |||||||||||||||| ||| || 
Sbjct: 1043 acccactggtagatctcggtggtgtaattggcgcaggtcacgatgttgaacaagaaaccg 984

                                                                        
Query: 585  cgtgggatctggtagccgccgctgccggtcgggctccttgaggttcctcagcaggatgtg 644
            || ||||||||||| |||||||||||| | ||||||| ||||||||| ||||||||||||
Sbjct: 983  cgggggatctggtacccgccgctgccgcttgggctcc-tgaggttccgcagcaggatgtg 925

                                                                        
Query: 645  gcagtagaagtttgcgatctggcacacgaccccgatgccgaacccaatcttcatctgcag 704
            |||||||||||| |||| |||||| |||||||| |  || ||||||||||||||||||||
Sbjct: 924  gcagtagaagttcgcgacctggcagacgaccccaaaaccaaacccaatcttcatctgcag 865

                 
Query: 705  gtcac 709
             ||||
Sbjct: 864  atcac 860
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>gb|BT018162.1| Zea mays clone EL01N0556D07.c mRNA sequence
          Length = 1165

 Score =  373 bits (188), Expect = e-100
 Identities = 322/364 (88%), Gaps = 2/364 (0%)
 Strand = Plus / Minus

                                                                        
Query: 347  tcttcacaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatcctt 406
            |||||||||||| ||||| || |||||||| ||||||||||||||||||| |||||||||
Sbjct: 1038 tcttcacaggaacggagggagaatcacccaccggcgagggtacttgggcctcccatcctt 979

                                                                        
Query: 407  cccgtcgaacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggc 466
             ||||| ||||||||| |||| |||||||| || || ||||||||||||||||||||| |
Sbjct: 978  gccgtcaaacagcttcttcagacggctgtgtttgccgagcgcccagttggtcatgatgcc 919

                                                                        
Query: 467  cgccgccacggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgag 526
             ||||||||| |||||||||||||||| ||||||||||| |||||||||||||| |||| 
Sbjct: 918  tgccgccacgacaaggaagacgtaacctgccacggtctgtgtggcgatgttgaagccgac 859

                                                                        
Query: 527  ccattggtagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccg 586
            ||| |||||||||||||||||||| || ||||| |||||||||||||||| ||| || ||
Sbjct: 858  ccactggtagatctcggtggtgtaattggcgcaggtcacgatgttgaacaagaacccgcg 799

                                                                        
Query: 587  tgggatctggtagccgccgctgccggtcgggctccttgaggttcctcagcaggatgtggc 646
             ||||||||||| || ||||||||| | ||||||| ||||||||| ||||||||||||||
Sbjct: 798  ggggatctggtaccctccgctgccgcttgggctcc-tgaggttccgcagcaggatgtggc 740

                                                                        
Query: 647  agtagaagtttgcgatctggcacacgacccc-gatgccgaacccaatcttcatctgcagg 705
            |||||||||| |||| |||||| ||||||||  |  || |||||||||||||||||||| 
Sbjct: 739  agtagaagttcgcgacctggcagacgaccccaaaaaccaaacccaatcttcatctgcaga 680

                
Query: 706  tcac 709
            ||||
Sbjct: 679  tcac 676
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>ref|XM_550155.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1226

 Score =  254 bits (128), Expect = 3e-64
 Identities = 297/352 (84%), Gaps = 1/352 (0%)
 Strand = Plus / Minus

                                                                        
Query: 352  acaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgt 411
            |||||||||| ||||| ||||||||||| ||||| ||||| |||| ||| ||||| || |
Sbjct: 1017 acaggaatggtggaagaatcacccatcgccgaggatacttcggcctcccttccttgccat 958

                                                                        
Query: 412  cgaacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccg 471
            |||||| |||| | || |||| |||||||||||| |||||||||||||||||   ||| |
Sbjct: 957  cgaacaacttctttagacggcggtgctttccaagtgcccagttggtcatgatactcgctg 898

                                                                        
Query: 472  ccacggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccatt 531
            ||||  ||||||||| |||||| ||||| ||||| ||||| ||||||||||| |||||||
Sbjct: 897  ccacaacaaggaagatgtaacctgccacagtctgtgtggcaatgttgaacccaagccatt 838

                                                                        
Query: 532  ggtagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtggga 591
            |||||||||| ||||| ||||||||||||||||| ||||||||||||||||| || || |
Sbjct: 837  ggtagatctcagtggtatagtttgcgcatgtcactatgttgaacaggaagccacgaggaa 778

                                                                        
Query: 592  tctggtagccgccgctgccggtcgggctccttgaggttcctcagcaggatgtggcagtag 651
            |||| ||||| ||| | ||  |||| || | ||||||||||||||||||| ||||| || 
Sbjct: 777  tctgatagccaccgttaccactcggacttc-tgaggttcctcagcaggatatggcaataa 719

                                                                
Query: 652  aagtttgcgatctggcacacgaccccgatgccgaacccaatcttcatctgca 703
            |||||||| || ||||| |  | ||| |  || |||||||||||||||||||
Sbjct: 718  aagtttgcaatttggcagagaatcccaaatccaaacccaatcttcatctgca 667
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>dbj|AK066325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062L06, full
            insert sequence
          Length = 3501

 Score =  254 bits (128), Expect = 3e-64
 Identities = 297/352 (84%), Gaps = 1/352 (0%)
 Strand = Plus / Minus

                                                                        
Query: 352  acaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgt 411
            |||||||||| ||||| ||||||||||| ||||| ||||| |||| ||| ||||| || |
Sbjct: 3206 acaggaatggtggaagaatcacccatcgccgaggatacttcggcctcccttccttgccat 3147

                                                                        
Query: 412  cgaacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccg 471
            |||||| |||| | || |||| |||||||||||| |||||||||||||||||   ||| |
Sbjct: 3146 cgaacaacttctttagacggcggtgctttccaagtgcccagttggtcatgatactcgctg 3087

                                                                        
Query: 472  ccacggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccatt 531
            ||||  ||||||||| |||||| ||||| ||||| ||||| ||||||||||| |||||||
Sbjct: 3086 ccacaacaaggaagatgtaacctgccacagtctgtgtggcaatgttgaacccaagccatt 3027

                                                                        
Query: 532  ggtagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtggga 591
            |||||||||| ||||| ||||||||||||||||| ||||||||||||||||| || || |
Sbjct: 3026 ggtagatctcagtggtatagtttgcgcatgtcactatgttgaacaggaagccacgaggaa 2967

                                                                        
Query: 592  tctggtagccgccgctgccggtcgggctccttgaggttcctcagcaggatgtggcagtag 651
            |||| ||||| ||| | ||  |||| || | ||||||||||||||||||| ||||| || 
Sbjct: 2966 tctgatagccaccgttaccactcggacttc-tgaggttcctcagcaggatatggcaataa 2908

                                                                
Query: 652  aagtttgcgatctggcacacgaccccgatgccgaacccaatcttcatctgca 703
            |||||||| || ||||| |  | ||| |  || |||||||||||||||||||
Sbjct: 2907 aagtttgcaatttggcagagaatcccaaatccaaacccaatcttcatctgca 2856
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>dbj|AK060948.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-F04, full
            insert sequence
          Length = 1221

 Score =  254 bits (128), Expect = 3e-64
 Identities = 297/352 (84%), Gaps = 1/352 (0%)
 Strand = Plus / Minus

                                                                        
Query: 352  acaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgt 411
            |||||||||| ||||| ||||||||||| ||||| ||||| |||| ||| ||||| || |
Sbjct: 1012 acaggaatggtggaagaatcacccatcgccgaggatacttcggcctcccttccttgccat 953

                                                                        
Query: 412  cgaacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccg 471
            |||||| |||| | || |||| |||||||||||| |||||||||||||||||   ||| |
Sbjct: 952  cgaacaacttctttagacggcggtgctttccaagtgcccagttggtcatgatactcgctg 893

                                                                        
Query: 472  ccacggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccatt 531
            ||||  ||||||||| |||||| ||||| ||||| ||||| ||||||||||| |||||||
Sbjct: 892  ccacaacaaggaagatgtaacctgccacagtctgtgtggcaatgttgaacccaagccatt 833

                                                                        
Query: 532  ggtagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtggga 591
            |||||||||| ||||| ||||||||||||||||| ||||||||||||||||| || || |
Sbjct: 832  ggtagatctcagtggtatagtttgcgcatgtcactatgttgaacaggaagccacgaggaa 773

                                                                        
Query: 592  tctggtagccgccgctgccggtcgggctccttgaggttcctcagcaggatgtggcagtag 651
            |||| ||||| ||| | ||  |||| || | ||||||||||||||||||| ||||| || 
Sbjct: 772  tctgatagccaccgttaccactcggacttc-tgaggttcctcagcaggatatggcaataa 714

                                                                
Query: 652  aagtttgcgatctggcacacgaccccgatgccgaacccaatcttcatctgca 703
            |||||||| || ||||| |  | ||| |  || |||||||||||||||||||
Sbjct: 713  aagtttgcaatttggcagagaatcccaaatccaaacccaatcttcatctgca 662
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  204 bits (103), Expect = 3e-49
 Identities = 233/275 (84%), Gaps = 1/275 (0%)
 Strand = Plus / Plus

                                                                           
Query: 429     cggctgtgctttccaagcgcccagttggtcatgatggccgccgccacggcaaggaagacg 488
               |||| |||||||||||| |||||||||||||||||   ||| |||||  ||||||||| |
Sbjct: 2707081 cggcggtgctttccaagtgcccagttggtcatgatactcgctgccacaacaaggaagatg 2707140

                                                                           
Query: 489     taacccgccacggtctgggtggcgatgttgaacccgagccattggtagatctcggtggtg 548
               ||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||||| 
Sbjct: 2707141 taacctgccacagtctgtgtggcaatgttgaacccaagccattggtagatctcagtggta 2707200

                                                                           
Query: 549     tagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatctggtagccgccgctg 608
               ||||||||||||||||| ||||||||||||||||| || || ||||| ||||| ||| | 
Sbjct: 2707201 tagtttgcgcatgtcactatgttgaacaggaagccacgaggaatctgatagccaccgtta 2707260

                                                                           
Query: 609     ccggtcgggctccttgaggttcctcagcaggatgtggcagtagaagtttgcgatctggca 668
               ||  |||| || | ||||||||||||||||||| ||||| || |||||||| || |||||
Sbjct: 2707261 ccactcggacttc-tgaggttcctcagcaggatatggcaataaaagtttgcaatttggca 2707319

                                                  
Query: 669     cacgaccccgatgccgaacccaatcttcatctgca 703
                |  | ||| |  || |||||||||||||||||||
Sbjct: 2707320 gagaatcccaaatccaaacccaatcttcatctgca 2707354



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                           
Query: 352     acaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgt 411
               |||||||||| ||||| ||||||||||| ||||| ||||| |||| ||| ||||| || |
Sbjct: 2706918 acaggaatggtggaagaatcacccatcgccgaggatacttcggcctcccttccttgccat 2706977

                     
Query: 412     cgaaca 417
               ||||||
Sbjct: 2706978 cgaaca 2706983
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>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0434B04
          Length = 167029

 Score =  204 bits (103), Expect = 3e-49
 Identities = 233/275 (84%), Gaps = 1/275 (0%)
 Strand = Plus / Plus

                                                                          
Query: 429    cggctgtgctttccaagcgcccagttggtcatgatggccgccgccacggcaaggaagacg 488
              |||| |||||||||||| |||||||||||||||||   ||| |||||  ||||||||| |
Sbjct: 156856 cggcggtgctttccaagtgcccagttggtcatgatactcgctgccacaacaaggaagatg 156915

                                                                          
Query: 489    taacccgccacggtctgggtggcgatgttgaacccgagccattggtagatctcggtggtg 548
              ||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||||| 
Sbjct: 156916 taacctgccacagtctgtgtggcaatgttgaacccaagccattggtagatctcagtggta 156975

                                                                          
Query: 549    tagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatctggtagccgccgctg 608
              ||||||||||||||||| ||||||||||||||||| || || ||||| ||||| ||| | 
Sbjct: 156976 tagtttgcgcatgtcactatgttgaacaggaagccacgaggaatctgatagccaccgtta 157035

                                                                          
Query: 609    ccggtcgggctccttgaggttcctcagcaggatgtggcagtagaagtttgcgatctggca 668
              ||  |||| || | ||||||||||||||||||| ||||| || |||||||| || |||||
Sbjct: 157036 ccactcggacttc-tgaggttcctcagcaggatatggcaataaaagtttgcaatttggca 157094

                                                 
Query: 669    cacgaccccgatgccgaacccaatcttcatctgca 703
               |  | ||| |  || |||||||||||||||||||
Sbjct: 157095 gagaatcccaaatccaaacccaatcttcatctgca 157129



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                          
Query: 352    acaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgt 411
              |||||||||| ||||| ||||||||||| ||||| ||||| |||| ||| ||||| || |
Sbjct: 156693 acaggaatggtggaagaatcacccatcgccgaggatacttcggcctcccttccttgccat 156752

                    
Query: 412    cgaaca 417
              ||||||
Sbjct: 156753 cgaaca 156758
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>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0009G03
          Length = 163526

 Score =  204 bits (103), Expect = 3e-49
 Identities = 233/275 (84%), Gaps = 1/275 (0%)
 Strand = Plus / Plus

                                                                         
Query: 429   cggctgtgctttccaagcgcccagttggtcatgatggccgccgccacggcaaggaagacg 488
             |||| |||||||||||| |||||||||||||||||   ||| |||||  ||||||||| |
Sbjct: 12758 cggcggtgctttccaagtgcccagttggtcatgatactcgctgccacaacaaggaagatg 12817

                                                                         
Query: 489   taacccgccacggtctgggtggcgatgttgaacccgagccattggtagatctcggtggtg 548
             ||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||||| 
Sbjct: 12818 taacctgccacagtctgtgtggcaatgttgaacccaagccattggtagatctcagtggta 12877

                                                                         
Query: 549   tagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatctggtagccgccgctg 608
             ||||||||||||||||| ||||||||||||||||| || || ||||| ||||| ||| | 
Sbjct: 12878 tagtttgcgcatgtcactatgttgaacaggaagccacgaggaatctgatagccaccgtta 12937

                                                                         
Query: 609   ccggtcgggctccttgaggttcctcagcaggatgtggcagtagaagtttgcgatctggca 668
             ||  |||| || | ||||||||||||||||||| ||||| || |||||||| || |||||
Sbjct: 12938 ccactcggacttc-tgaggttcctcagcaggatatggcaataaaagtttgcaatttggca 12996

                                                
Query: 669   cacgaccccgatgccgaacccaatcttcatctgca 703
              |  | ||| |  || |||||||||||||||||||
Sbjct: 12997 gagaatcccaaatccaaacccaatcttcatctgca 13031



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 352   acaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgt 411
             |||||||||| ||||| ||||||||||| ||||| ||||| |||| ||| ||||| || |
Sbjct: 12595 acaggaatggtggaagaatcacccatcgccgaggatacttcggcctcccttccttgccat 12654

                   
Query: 412   cgaaca 417
             ||||||
Sbjct: 12655 cgaaca 12660
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>ref|NM_115394.2| Arabidopsis thaliana CER10/ECR; 3-oxo-5-alpha-steroid
            4-dehydrogenase/ fatty acid elongase AT3G55360
            (CER10/ECR) mRNA, complete cds
          Length = 1319

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 198/248 (79%)
 Strand = Plus / Minus

                                                                        
Query: 354  aggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgtcg 413
            |||||||||||||| ||||||||||  |  || ||||| |||   ||||| || || || 
Sbjct: 1059 aggaatggaggaagtatcacccatcttcttggatactttggctttccatcttttccatca 1000

                                                                        
Query: 414  aacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgcc 473
            || | ||| ||||| ||||||||||||||||| ||||| || ||||||||    || || 
Sbjct: 999  aatatctttctcagacggctgtgctttccaagagcccaattagtcatgattagagcagca 940

                                                                        
Query: 474  acggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattgg 533
            || || ||||| || || || || | |||||| || ||||||||||| || |||||||||
Sbjct: 939  acagcgaggaaaacatatcctgcaatggtctgagtagcgatgttgaatcctagccattgg 880

                                                                        
Query: 534  tagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatc 593
            || |||||||| ||||| || || ||||| || |||||||| ||||| || ||||| |||
Sbjct: 879  taaatctcggtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatc 820

                    
Query: 594  tggtagcc 601
            ||||||||
Sbjct: 819  tggtagcc 812



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 682 ccgaacccaatcttcatctgcaggtcac 709
           ||||| |||||||||||||| |||||||
Sbjct: 732 ccgaaaccaatcttcatctgaaggtcac 705
to top
>gb|BT012066.1| Arabidopsis thaliana At3g55360 mRNA sequence
          Length = 930

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 198/248 (79%)
 Strand = Plus / Minus

                                                                       
Query: 354 aggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgtcg 413
           |||||||||||||| ||||||||||  |  || ||||| |||   ||||| || || || 
Sbjct: 926 aggaatggaggaagtatcacccatcttcttggatactttggctttccatcttttccatca 867

                                                                       
Query: 414 aacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgcc 473
           || | ||| ||||| ||||||||||||||||| ||||| || ||||||||    || || 
Sbjct: 866 aatatctttctcagacggctgtgctttccaagagcccaattagtcatgattagagcagca 807

                                                                       
Query: 474 acggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattgg 533
           || || ||||| || || || || | |||||| || ||||||||||| || |||||||||
Sbjct: 806 acagcgaggaaaacatatcctgcaatggtctgagtagcgatgttgaatcctagccattgg 747

                                                                       
Query: 534 tagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatc 593
           || |||||||| ||||| || || ||||| || |||||||| ||||| || ||||| |||
Sbjct: 746 taaatctcggtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatc 687

                   
Query: 594 tggtagcc 601
           ||||||||
Sbjct: 686 tggtagcc 679



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 682 ccgaacccaatcttcatctgcaggtcac 709
           ||||| |||||||||||||| |||||||
Sbjct: 599 ccgaaaccaatcttcatctgaaggtcac 572
to top
>gb|AY081583.1| Arabidopsis thaliana glycoprotein-like (T22E16.2) mRNA, complete
           cds
          Length = 1134

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 198/248 (79%)
 Strand = Plus / Minus

                                                                       
Query: 354 aggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgtcg 413
           |||||||||||||| ||||||||||  |  || ||||| |||   ||||| || || || 
Sbjct: 929 aggaatggaggaagtatcacccatcttcttggatactttggctttccatcttttccatca 870

                                                                       
Query: 414 aacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgcc 473
           || | ||| ||||| ||||||||||||||||| ||||| || ||||||||    || || 
Sbjct: 869 aatatctttctcagacggctgtgctttccaagagcccaattagtcatgattagagcagca 810

                                                                       
Query: 474 acggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattgg 533
           || || ||||| || || || || | |||||| || ||||||||||| || |||||||||
Sbjct: 809 acagcgaggaaaacatatcctgcaatggtctgagtagcgatgttgaatcctagccattgg 750

                                                                       
Query: 534 tagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatc 593
           || |||||||| ||||| || || ||||| || |||||||| ||||| || ||||| |||
Sbjct: 749 taaatctcggtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatc 690

                   
Query: 594 tggtagcc 601
           ||||||||
Sbjct: 689 tggtagcc 682



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 682 ccgaacccaatcttcatctgcaggtcac 709
           ||||| |||||||||||||| |||||||
Sbjct: 602 ccgaaaccaatcttcatctgaaggtcac 575
to top
>gb|AY065136.1| Arabidopsis thaliana glycoprotein-like (T22E16.2) mRNA, complete
           cds
          Length = 1218

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 198/248 (79%)
 Strand = Plus / Minus

                                                                       
Query: 354 aggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgtcg 413
           |||||||||||||| ||||||||||  |  || ||||| |||   ||||| || || || 
Sbjct: 964 aggaatggaggaagtatcacccatcttcttggatactttggctttccatcttttccatca 905

                                                                       
Query: 414 aacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgcc 473
           || | ||| ||||| ||||||||||||||||| ||||| || ||||||||    || || 
Sbjct: 904 aatatctttctcagacggctgtgctttccaagagcccaattagtcatgattagagcagca 845

                                                                       
Query: 474 acggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattgg 533
           || || ||||| || || || || | |||||| || ||||||||||| || |||||||||
Sbjct: 844 acagcgaggaaaacatatcctgcaatggtctgagtagcgatgttgaatcctagccattgg 785

                                                                       
Query: 534 tagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatc 593
           || |||||||| ||||| || || ||||| || |||||||| ||||| || ||||| |||
Sbjct: 784 taaatctcggtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatc 725

                   
Query: 594 tggtagcc 601
           ||||||||
Sbjct: 724 tggtagcc 717



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 682 ccgaacccaatcttcatctgcaggtcac 709
           ||||| |||||||||||||| |||||||
Sbjct: 637 ccgaaaccaatcttcatctgaaggtcac 610
to top
>emb|BX826269.1|CNS0A4Y2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL95ZE06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1098

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 198/248 (79%)
 Strand = Plus / Minus

                                                                       
Query: 354 aggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgtcg 413
           |||||||||||||| ||||||||||  |  || ||||| |||   ||||| || || || 
Sbjct: 961 aggaatggaggaagtatcacccatcttcttggatactttggctttccatcttttccatca 902

                                                                       
Query: 414 aacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgcc 473
           || | ||| ||||| ||||||||||||||||| ||||| || ||||||||    || || 
Sbjct: 901 aatatctttctcagacggctgtgctttccaagagcccaattagtcatgattagagcagca 842

                                                                       
Query: 474 acggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattgg 533
           || || ||||| || || || || | |||||| || ||||||||||| || |||||||||
Sbjct: 841 acagcgaggaaaacatatcctgcaatggtctgagtagcgatgttgaatcctagccattgg 782

                                                                       
Query: 534 tagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatc 593
           || |||||||| ||||| || || ||||| || |||||||| ||||| || ||||| |||
Sbjct: 781 taaatctcggtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatc 722

                   
Query: 594 tggtagcc 601
           ||||||||
Sbjct: 721 tggtagcc 714



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 682 ccgaacccaatcttcatctgcaggtcac 709
           ||||| |||||||||||||| |||||||
Sbjct: 634 ccgaaaccaatcttcatctgaaggtcac 607
to top
>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16
          Length = 103240

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 146/179 (81%)
 Strand = Plus / Plus

                                                                        
Query: 423  ctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgccacggcaagg 482
            ||||| ||||||||||||||||| ||||| || ||||||||    || || || || |||
Sbjct: 3825 ctcagacggctgtgctttccaagagcccaattagtcatgattagagcagcaacagcgagg 3884

                                                                        
Query: 483  aagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattggtagatctcg 542
            || || || || || | |||||| || ||||||||||| || ||||||||||| ||||||
Sbjct: 3885 aaaacatatcctgcaatggtctgagtagcgatgttgaatcctagccattggtaaatctcg 3944

                                                                       
Query: 543  gtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatctggtagcc 601
            || ||||| || || ||||| || |||||||| ||||| || ||||| |||||||||||
Sbjct: 3945 gtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatctggtagcc 4003



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 354  aggaatggaggaaggatcacccatc 378
            |||||||||||||| ||||||||||
Sbjct: 3664 aggaatggaggaagtatcacccatc 3688



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 682  ccgaacccaatcttcatctgcaggtcac 709
            ||||| |||||||||||||| |||||||
Sbjct: 4083 ccgaaaccaatcttcatctgaaggtcac 4110
to top
>gb|AY088452.1| Arabidopsis thaliana clone 6774 mRNA, complete sequence
          Length = 1311

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 197/248 (79%)
 Strand = Plus / Minus

                                                                        
Query: 354  aggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgtcg 413
            |||||||||||||| ||||||||||  |  || ||||| |||   ||||| || || || 
Sbjct: 1056 aggaatggaggaagtatcacccatcttcttggatactttggctttccatcttttccatca 997

                                                                        
Query: 414  aacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgcc 473
            || | ||| ||||| ||||||||||||||||| ||||| || ||||||||    || || 
Sbjct: 996  aatatctttctcagacggctgtgctttccaagagcccaattagtcatgattagagcagca 937

                                                                        
Query: 474  acggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattgg 533
            || || ||||| || || || || | |||||| || || |||||||| || |||||||||
Sbjct: 936  acagcgaggaaaacatatcctgcaatggtctgagtagcaatgttgaatcctagccattgg 877

                                                                        
Query: 534  tagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatc 593
            || |||||||| ||||| || || ||||| || |||||||| ||||| || ||||| |||
Sbjct: 876  taaatctcggtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatc 817

                    
Query: 594  tggtagcc 601
            ||||||||
Sbjct: 816  tggtagcc 809



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 682 ccgaacccaatcttcatctgcaggtcac 709
           ||||| |||||||||||||| |||||||
Sbjct: 729 ccgaaaccaatcttcatctgaaggtcac 702
to top
>emb|AJ515556.1|CAR515556 Cicer arietinum mRNA for steroid 5-alpha reductase (sr5a gene)
          Length = 1336

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 419 cttcctcaggcggctgtgctttccaagcgcccagttggtcatgat 463
           |||| ||| ||| ||||||||| |||| |||||||||||||||||
Sbjct: 974 cttcttcaagcgcctgtgctttgcaagagcccagttggtcatgat 930
to top
>ref|XM_370036.1| Magnaporthe grisea 70-15 hypothetical protein (MG06551.4) partial
           mRNA
          Length = 963

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 95  accatcttgaggttggacttg 115
           |||||||||||||||||||||
Sbjct: 659 accatcttgaggttggacttg 639
to top
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 12      tggtaaagtcatcggaatggc 32
               |||||||||||||||||||||
Sbjct: 1067555 tggtaaagtcatcggaatggc 1067535
to top
>gb|AE004700.1| Pseudomonas aeruginosa PAO1, section 261 of 529 of the complete
            genome
          Length = 16118

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 599  gccgccgctgccggtcgggct 619
            |||||||||||||||||||||
Sbjct: 2836 gccgccgctgccggtcgggct 2816
to top
>gb|AY946230.1| Hordeum vulgare subsp. vulgare 3' flanking sequence from Ds
           insertion in TNP-32B
          Length = 1007

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 349 ttcacaggaatggaggaagga 369
           |||||||||||||||||||||
Sbjct: 167 ttcacaggaatggaggaagga 147
to top
>gb|U48208.1|HIV1U48208 Human immunodeficiency virus type 1 clone 11 sample IV envelope
           glycoprotein (env) gene, C2-V5 region, partial cds
          Length = 660

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 535 agatctcggtggtgtagtttg 555
           |||||||||||||||||||||
Sbjct: 619 agatctcggtggtgtagtttg 599
to top
>gb|L36679.1|AMLUNA Amycolatopsis methanolica plasmid pMEA300 stf gene, complete cds
          Length = 13285

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 598  agccgccgctgccggtcgggc 618
            |||||||||||||||||||||
Sbjct: 4138 agccgccgctgccggtcgggc 4118
to top
>gb|M75151.1|RATDNA Rattus norvegicus DNA
          Length = 4931

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 304 aaatgttgaatctctagatac 324
           |||||||||||||||||||||
Sbjct: 856 aaatgttgaatctctagatac 836
to top
>gb|AC152117.2| Pichia stipitis clone JGIAHYZ-5A1, complete sequence
          Length = 34078

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   acataattgaggtttgacag 224
             ||||||||||||||||||||
Sbjct: 23203 acataattgaggtttgacag 23184
to top
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    ccacggtctgggtggcgatg 515
              ||||||||||||||||||||
Sbjct: 455773 ccacggtctgggtggcgatg 455754
to top
>ref|XM_473416.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2652

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 598 agccgccgctgccggtcgggctcc 621
           |||||||||| |||||||||||||
Sbjct: 38  agccgccgcttccggtcgggctcc 15
to top
>gb|AC119252.10| Mus musculus chromosome 8, clone RP24-279M13, complete sequence
          Length = 176594

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 158    aacaataggataagaaaata 177
              ||||||||||||||||||||
Sbjct: 103028 aacaataggataagaaaata 103047
to top
>emb|CR701735.2|CNS0G4ER Tetraodon nigroviridis full-length cDNA
          Length = 1495

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 459 atgatggccgccgccacggc 478
           ||||||||||||||||||||
Sbjct: 896 atgatggccgccgccacggc 915
to top
>emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034G17,
             complete sequence
          Length = 127259

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 598   agccgccgctgccggtcgggctcc 621
             |||||||||| |||||||||||||
Sbjct: 56858 agccgccgcttccggtcgggctcc 56881
to top
>emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in linkage group 8,
             complete sequence
          Length = 218866

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   cggtctgggtggcgatgttg 518
             ||||||||||||||||||||
Sbjct: 99157 cggtctgggtggcgatgttg 99176
to top
>gb|AC093258.2| Homo sapiens chromosome 5 clone RP11-1E3, complete sequence
          Length = 151202

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   aacactggaacagaataaat 307
             ||||||||||||||||||||
Sbjct: 88947 aacactggaacagaataaat 88966
to top
>gb|AC148698.1| Macaca mulatta Major Histocompatibility Complex BAC MMU268P23, complete
              sequence
          Length = 185838

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    cagcttcctcaggcggctgt 435
              ||||||||||||||||||||
Sbjct: 146241 cagcttcctcaggcggctgt 146222
to top
>gb|AC148682.1| Macaca mulatta Major Histocompatibility Complex MMU151L13, complete
            sequence
          Length = 199819

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  cagcttcctcaggcggctgt 435
            ||||||||||||||||||||
Sbjct: 2620 cagcttcctcaggcggctgt 2601
to top
>gb|AC146538.2| Gasterosteus aculeatus clone CH213-118G22, complete sequence
          Length = 211945

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   tcatgatggccgccgccacg 476
             ||||||||||||||||||||
Sbjct: 44879 tcatgatggccgccgccacg 44860
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 598      agccgccgctgccggtcgggctcc 621
                |||||||||| |||||||||||||
Sbjct: 27532882 agccgccgcttccggtcgggctcc 27532905
to top
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 416     cagcttcctcaggcggctgt 435
               ||||||||||||||||||||
Sbjct: 3263120 cagcttcctcaggcggctgt 3263139
to top
>gb|AC073624.28| Homo sapiens chromosome 17, clone RP11-537K14, complete sequence
          Length = 145512

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   agataccagccttgcaagca 338
             ||||||||||||||||||||
Sbjct: 31611 agataccagccttgcaagca 31592
to top
>gb|AC011750.8| Homo sapiens BAC clone RP11-458C9 from 2, complete sequence
          Length = 139166

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 288   aacactggaacagaataaatgttg 311
             |||||||||||| |||||||||||
Sbjct: 53954 aacactggaacaaaataaatgttg 53977
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 469     ccgccacggcaaggaagacg 488
               ||||||||||||||||||||
Sbjct: 2510070 ccgccacggcaaggaagacg 2510089
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 496     ccacggtctgggtggcgatg 515
               ||||||||||||||||||||
Sbjct: 1510673 ccacggtctgggtggcgatg 1510654
to top
>emb|AL935283.16| Zebrafish DNA sequence from clone CH211-247O1 in linkage group 7,
              complete sequence
          Length = 197927

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 499    cggtctgggtggcgatgttg 518
              ||||||||||||||||||||
Sbjct: 170816 cggtctgggtggcgatgttg 170797
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 593     ctggtagccgccgctgccgg 612
               ||||||||||||||||||||
Sbjct: 1724509 ctggtagccgccgctgccgg 1724528


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,178,485
Number of Sequences: 3902068
Number of extensions: 5178485
Number of successful extensions: 105448
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104966
Number of HSP's gapped (non-prelim): 474
length of query: 709
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 686
effective length of database: 17,143,297,704
effective search space: 11760302224944
effective search space used: 11760302224944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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