ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18j12 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 293 bits (749), Expect = 4e-79 Identities = 136/154 (88%), Positives = 147/154 (95%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TRDLFARPFRKKGYIPL+TYLRT+KVG+YVDVKVNGA+HKGMPHKFYHGRTGR+WNVTKR Sbjct: 11 TRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKR 70 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKR 322 A+GVE+NKQ+GNRIIRKRIHVRVEHVQ SRCAEEF+LRK KND+LKA AKA GE ISTKR Sbjct: 71 AVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKR 130 Query: 321 QPLGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 220 QP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY Sbjct: 131 QPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 163 bits (412), Expect = 5e-40 Identities = 85/148 (57%), Positives = 108/148 (72%), Gaps = 3/148 (2%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR LFAR F+ G + L+TYL +K+GEYVDV N AVHKGMP K+YHGRTG VWNVTKR Sbjct: 11 TRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKR 70 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK-ARGEVISTK 325 AIGVEINK+V +RII+KRIHVR++HV+ S C + F R +ND++K +A A+ V STK Sbjct: 71 AIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTK 130 Query: 324 RQPLGPKPGFMV--EGTTIETVTPIPYD 247 R P+ PK G ++ +G ET IPY+ Sbjct: 131 RLPVLPKAGAIIKSKGQVPETCHAIPYE 158
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 160 bits (406), Expect = 3e-39 Identities = 76/147 (51%), Positives = 105/147 (71%), Gaps = 2/147 (1%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR +F R FRK G + L+TYL+ YKVG+ VD+K NG++ KGMPHKFY G+TG V+NVTK Sbjct: 11 TRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKS 70 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKR 322 ++GV INK VGNR + KR+++RVEH++ S+C +EF R N +AEAKA+G + KR Sbjct: 71 SVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKR 130 Query: 321 QPLGPKPGFMV--EGTTIETVTPIPYD 247 QP P+ +V EG +T+ P+PY+ Sbjct: 131 QPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 159 bits (403), Expect = 6e-39 Identities = 75/147 (51%), Positives = 105/147 (71%), Gaps = 2/147 (1%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR +F R FRK G + ++TYL+ YKVG+ VD+K NG++ KGMPHKFY G+TG V+NVTK Sbjct: 11 TRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKS 70 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKR 322 ++GV INK VGNR + KR+++RVEH++ S+C +EF R N +AEAKA+G + KR Sbjct: 71 SVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKR 130 Query: 321 QPLGPKPGFMV--EGTTIETVTPIPYD 247 QP P+ +V EG +T+ P+PY+ Sbjct: 131 QPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 157 bits (396), Expect = 4e-38 Identities = 75/147 (51%), Positives = 101/147 (68%), Gaps = 2/147 (1%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR +F+RPFRK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ Sbjct: 10 TRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQH 69 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKR 322 A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G + KR Sbjct: 70 AVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKR 129 Query: 321 QPLGPKPGFMV--EGTTIETVTPIPYD 247 QP P+ V G E + PIPY+ Sbjct: 130 QPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 155 bits (393), Expect = 8e-38 Identities = 74/147 (50%), Positives = 101/147 (68%), Gaps = 2/147 (1%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR +F+RP+RK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ Sbjct: 10 TRYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQH 69 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKR 322 A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G + KR Sbjct: 70 AVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKR 129 Query: 321 QPLGPKPGFMV--EGTTIETVTPIPYD 247 QP P+ V G E + PIPY+ Sbjct: 130 QPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 153 bits (387), Expect = 4e-37 Identities = 76/147 (51%), Positives = 102/147 (69%), Gaps = 2/147 (1%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+TG V+NVT+ Sbjct: 11 TRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQS 70 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKR 322 ++GV I K VGNR + KR++VR+EHV+ S+C ++F R N+ + EAKA+G+ + +R Sbjct: 71 SVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRR 130 Query: 321 QPLGPKPGFMVEGTTIETVT--PIPYD 247 QP P V E VT P+ YD Sbjct: 131 QPAPPATAHFVSTENNEPVTLHPVAYD 157
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 153 bits (387), Expect = 4e-37 Identities = 76/147 (51%), Positives = 102/147 (69%), Gaps = 2/147 (1%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+TG V+NVT+ Sbjct: 11 TRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQS 70 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKR 322 ++GV I K VGNR + KR++VR+EHV+ S+C ++F R N+ + EAKA+G+ + +R Sbjct: 71 SVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRR 130 Query: 321 QPLGPKPGFMVEGTTIETVT--PIPYD 247 QP P V E VT P+ YD Sbjct: 131 QPAPPAKAHFVSTENNEPVTLHPVAYD 157
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 152 bits (383), Expect = 1e-36 Identities = 73/147 (49%), Positives = 99/147 (67%), Gaps = 2/147 (1%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR +F+RPFRK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ Sbjct: 10 TRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQH 69 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKR 322 A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G + Sbjct: 70 AVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLNG 129 Query: 321 QPLGPKPGFMV--EGTTIETVTPIPYD 247 QP P+ V G E + PIPY+ Sbjct: 130 QPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 151 bits (382), Expect = 2e-36 Identities = 73/147 (49%), Positives = 99/147 (67%), Gaps = 2/147 (1%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR +F+RPFRK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ Sbjct: 10 TRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQH 69 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKR 322 A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G + KR Sbjct: 70 AVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKR 129 Query: 321 QPLGPKPGFMV--EGTTIETVTPIPYD 247 P+ V G E + PIPY+ Sbjct: 130 HAAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 136 bits (342), Expect = 7e-32 Identities = 66/144 (45%), Positives = 98/144 (68%), Gaps = 1/144 (0%) Frame = -1 Query: 675 DLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAI 496 D+F++ FR++G IPL YL YK G+ VD+K +G+V K PHK YHG+TGR++NVT+ A+ Sbjct: 11 DMFSKKFRERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQHAV 70 Query: 495 GVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQP 316 G+ +NKQV RII KRI+VR+EH++ S+ F R +N++ + EA+ + ++ KRQP Sbjct: 71 GIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREKKIRVNLKRQP 130 Query: 315 LGPKPGFMVEGTT-IETVTPIPYD 247 P+ G V + E V PIPY+ Sbjct: 131 QQPRTGHFVRSSAEPELVEPIPYE 154
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 135 bits (340), Expect = 1e-31 Identities = 67/150 (44%), Positives = 99/150 (66%), Gaps = 3/150 (2%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR +FAR FRK G L+TY YK G+ VD+K NGA KGMP K YHGRTGR++NVT+ Sbjct: 10 TRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRG 69 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGE-VISTK 325 A+G+ +NK+V I+ KRI++R+EH++PS+C +F R ND+ + AK+ G+ V + K Sbjct: 70 AVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALK 129 Query: 324 RQPLGPKPGFMV--EGTTIETVTPIPYDVV 241 R P+ P+ V + E + P+ +++V Sbjct: 130 RLPVAPRGAHTVTTQNNEPELLAPLRFEIV 159
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 132 bits (331), Expect = 1e-30 Identities = 68/154 (44%), Positives = 96/154 (62%), Gaps = 9/154 (5%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR LF RPFR G +T L TYKVG+YV + N ++ G+P+K +HG+TGRVWNV Sbjct: 11 TRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPH 70 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKV-------KNDQLKAEAKARG 343 AIGV +NK+V NRI+ KR+H+ EH++PS C ++F RK +N QLK E K Sbjct: 71 AIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPL- 129 Query: 342 EVISTKRQPLGPKPGFMVEGTTIE--TVTPIPYD 247 + KR P P+P +++G I+ TV P+ ++ Sbjct: 130 LPLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 114 bits (285), Expect = 3e-25 Identities = 56/127 (44%), Positives = 90/127 (70%), Gaps = 1/127 (0%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR LF++ RK G ++ YL Y++G+ VD+ VN A+ KGMPHK+YHGRTGRV++V R Sbjct: 10 TRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPR 69 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVIS-TK 325 ++ V + K+V + + K+I VR+EHV+ SRC+EE + R + ++ +A++RG V++ +K Sbjct: 70 SLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVLAPSK 129 Query: 324 RQPLGPK 304 R+ GP+ Sbjct: 130 RKIEGPR 136
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 75.9 bits (185), Expect = 1e-13 Identities = 32/52 (61%), Positives = 40/52 (76%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTG 526 TR +F+RPFRK G +PL TY+R YK G+ VD+K G V KG+PHK YHG+TG Sbjct: 10 TRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGKTG 61
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 68.6 bits (166), Expect = 2e-11 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%) Frame = -1 Query: 681 TRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTK 505 TR L + R+KG IP L+ + Y GEYV VK+N ++HKGMPH+ YHG+ G V V K Sbjct: 12 TRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLV--VGK 69 Query: 504 RAIGVEINKQVGNRIIRKRIHVRVEHVQP 418 R E+ +G++ + + VR EH+ P Sbjct: 70 RGKAYEVKVNIGDK--ERVLIVRPEHLIP 96
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 63.2 bits (152), Expect = 7e-10 Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 2/98 (2%) Frame = -1 Query: 681 TRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHK-GMPHKFYHGRTGRVWNVT 508 TR L +P R+KG IP L+TYLR Y+VG+ V + +N + GMPH+ +HG TG V V Sbjct: 12 TRRLLRKPVREKGSIPRLSTYLREYRVGDKVAIIINPSFPDWGMPHRRFHGLTGTV--VG 69 Query: 507 KRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFR 394 KR E+ +G + RK + V H++P A E R Sbjct: 70 KRGEAYEVEVYLGRK--RKTLFVPPVHLKPLSTAAERR 105
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 61.2 bits (147), Expect = 3e-09 Identities = 34/89 (38%), Positives = 53/89 (59%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR ++ R++G P+T LR +K GEYV + ++ +VHKGMPH +HGRTG V R Sbjct: 12 TRKKLSKHPRERGLYPITRALREFKEGEYVHIVIDPSVHKGMPHPRFHGRTGIVVGKQGR 71 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPS 415 A V++ G + K+I +H++P+ Sbjct: 72 AFIVKVRD--GGKY--KQIIAYPQHLRPA 96
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 60.1 bits (144), Expect = 6e-09 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 1/87 (1%) Frame = -1 Query: 681 TRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTK 505 TR L + R++G +P L+ + +K G+YV +K+N +VHKGMPH+ YHG+ G + K Sbjct: 12 TRKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGKVGVIQG--K 69 Query: 504 RAIGVEINKQVGNRIIRKRIHVRVEHV 424 R + +G++ K I VR EH+ Sbjct: 70 RGKAYIVRVTLGDK--EKVIIVRPEHL 94
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 55.8 bits (133), Expect = 1e-07 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 1/89 (1%) Frame = -1 Query: 681 TRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTK 505 +R L + R++G +P L+ + YK G+ V VK+N +VH+GMPH+ Y G+ G++ + K Sbjct: 12 SRSLLRKSPRERGAVPSLSKLMVEYKEGDNVVVKINPSVHQGMPHRRYQGKVGKI--IGK 69 Query: 504 RAIGVEINKQVGNRIIRKRIHVRVEHVQP 418 R ++ +G++ K I VR EH+ P Sbjct: 70 RGRAYLVSVTLGDK--EKVIIVRPEHLVP 96
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 55.5 bits (132), Expect = 2e-07 Identities = 30/90 (33%), Positives = 50/90 (55%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR + R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR Sbjct: 12 TRKKLRKHPRRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV--VGKR 69 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSR 412 + GN++ K + + H++P + Sbjct: 70 GDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 55.5 bits (132), Expect = 2e-07 Identities = 30/90 (33%), Positives = 50/90 (55%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR + R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR Sbjct: 12 TRKKLRKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV--VGKR 69 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSR 412 + GN++ K + + H++P + Sbjct: 70 GDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 54.7 bits (130), Expect = 3e-07 Identities = 29/90 (32%), Positives = 52/90 (57%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR ++ R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR Sbjct: 12 TRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV--VGKR 69 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSR 412 + + G+++ K + + H++P + Sbjct: 70 GEAYIVEIKDGSKV--KTLFIHPVHLRPQK 97
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 54.3 bits (129), Expect = 3e-07 Identities = 33/93 (35%), Positives = 50/93 (53%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR + R++G PL + ++ G+ V + ++ +VHKGMPH YHGRTG V R Sbjct: 12 TRKKLRKKPRERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHGRTGEVVGRQGR 71 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAE 403 A V+I G + K++ V EH++P E Sbjct: 72 AYIVKIRD--GGK--EKKLIVYPEHLKPQEQPE 100
>RL21_PYRKO (Q5JI51) 50S ribosomal protein L21e| Length = 98 Score = 52.8 bits (125), Expect = 1e-06 Identities = 29/90 (32%), Positives = 49/90 (54%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR ++ R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR Sbjct: 12 TRGKLSKHPRRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV--VGKR 69 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSR 412 + G ++ K + H++P + Sbjct: 70 GDAYIVQITDGGKV--KTFFIHPVHLRPQK 97
>RL21_METMP (Q6M125) 50S ribosomal protein L21e| Length = 97 Score = 50.8 bits (120), Expect = 4e-06 Identities = 30/81 (37%), Positives = 46/81 (56%) Frame = -1 Query: 654 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 475 R+KG PLT L+ Y G+ V V ++ +V KGMPH +HG+TG V V +R + + Sbjct: 20 RQKGMAPLTRALKCYTEGDLVHVVLDPSVQKGMPHPKFHGKTGVV--VAQRGSSFLVRVK 77 Query: 474 VGNRIIRKRIHVRVEHVQPSR 412 G + K I R +H++ S+ Sbjct: 78 DGGKY--KDIIARPQHLRESK 96
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 48.1 bits (113), Expect = 2e-05 Identities = 23/72 (31%), Positives = 45/72 (62%) Frame = -1 Query: 636 PLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRII 457 P+T ++++ G+ V + ++ ++H+G PH +HG+TGRV + ++ V + GN+ Sbjct: 26 PITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGKTGRVVGMMGKSYVVALKD--GNK-- 81 Query: 456 RKRIHVRVEHVQ 421 K++ VR EH+Q Sbjct: 82 DKQLVVRPEHLQ 93
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 47.4 bits (111), Expect = 4e-05 Identities = 29/79 (36%), Positives = 46/79 (58%) Frame = -1 Query: 654 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 475 R+KG + + +L+T+ VG+ V + + A KGMPH + GRTG V RA V++ Sbjct: 21 REKG-VRIRKFLQTFDVGQRVHIDIEPASQKGMPHPRFQGRTGVVIGQRGRAYLVQVRD- 78 Query: 474 VGNRIIRKRIHVRVEHVQP 418 G ++ K + VR EH++P Sbjct: 79 -GGKM--KTLIVRPEHLKP 94
>RL21_XENLA (P49628) 60S ribosomal protein L21 (Fragment)| Length = 33 Score = 44.3 bits (103), Expect = 3e-04 Identities = 18/32 (56%), Positives = 24/32 (75%) Frame = -1 Query: 663 RPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAV 568 RPFRK G +PL+TY+R YK G+ VD+K G + Sbjct: 1 RPFRKHGAVPLSTYMRIYKKGDIVDIKGMGTI 32
>RL21_METAC (Q8TQU3) 50S ribosomal protein L21e| Length = 97 Score = 43.1 bits (100), Expect = 8e-04 Identities = 23/90 (25%), Positives = 49/90 (54%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR + R++G P++ ++ ++ G+ V + ++ +V KGMP+ + G TG+V R Sbjct: 11 TRYKLQKTVRERGISPVSRAIQEFEEGQMVHIDIDPSVQKGMPNPKFQGSTGKVIGQRGR 70 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSR 412 + +E+ GN + K + +H++P + Sbjct: 71 SYVLEVRS--GNAM--KEVFSLPQHLKPQK 96
>RL21_PYRAE (Q8ZTB5) 50S ribosomal protein L21e| Length = 100 Score = 42.7 bits (99), Expect = 0.001 Identities = 28/88 (31%), Positives = 45/88 (51%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR L + R+KG L+ L YKVG+ V + ++ PH+ Y G+ G V + R Sbjct: 12 TRKLLRKKPREKGLSGLSRLLYEYKVGDKVIIDIDSTFISTAPHRRYQGKVGTVVGIRGR 71 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQP 418 A +E +G++ +K I EH++P Sbjct: 72 AYVIE--TFLGDK--KKIIITTPEHLKP 95
>RL21_NANEQ (Q74N21) 50S ribosomal protein L21e| Length = 98 Score = 40.0 bits (92), Expect = 0.007 Identities = 25/87 (28%), Positives = 43/87 (49%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TRD ++ R++G + +T L+ + + V + + + H GMPH YHG G V V KR Sbjct: 13 TRDKLSKHPRQRGKLTITRILQKFNNNDKVAIVIEPSWHYGMPHPRYHGLVGTV--VGKR 70 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQ 421 E+ + +K + V H++ Sbjct: 71 GNCYEVELEFNGE--KKLLIVHPAHLK 95
>RL21_PICTO (Q6L228) 50S ribosomal protein L21e| Length = 97 Score = 39.3 bits (90), Expect = 0.011 Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 3/85 (3%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 +R + + + KG + ++T++VG+ + +N AV GMPH + G TG + + + Sbjct: 12 SRRVMTKSVKNKGMPKVNEMMKTFEVGDRAAIVINSAVPDGMPHHDFQGITGVITGM--Q 69 Query: 501 AIGVEINKQVGN---RIIRKRIHVR 436 ++ +VGN ++I +H+R Sbjct: 70 GSCYILSFKVGNVEKKVIAAPVHLR 94
>RL21_METMA (Q8PU21) 50S ribosomal protein L21e| Length = 97 Score = 39.3 bits (90), Expect = 0.011 Identities = 22/90 (24%), Positives = 49/90 (54%) Frame = -1 Query: 681 TRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 502 TR + R++G P++ ++ ++ G+ V + ++ +V KGMP+ + G TG+V + +R Sbjct: 11 TRYKLQKTVRERGISPVSKAIQEFEDGQMVHIDIDPSVQKGMPNPKFQGFTGKV--IGQR 68 Query: 501 AIGVEINKQVGNRIIRKRIHVRVEHVQPSR 412 + + GN + K + +H++P + Sbjct: 69 GRSYILAVREGNSM--KEVFSVPQHLKPQK 96
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 31.2 bits (69), Expect = 3.1 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -1 Query: 468 NRIIRKRIHVRVEHVQPSRCAEEFRLR 388 NRI +RIH+ +H Q ++C E FR R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>AMD_RAT (P14925) Peptidyl-glycine alpha-amidating monooxygenase precursor (EC| 1.14.17.3) (PAM) Length = 976 Score = 30.8 bits (68), Expect = 4.0 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 3/131 (2%) Frame = -1 Query: 636 PLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW---NVTKRAIGVEINKQVGN 466 P+ ++ + GE +DV H MPH G V+ T + +++ + Sbjct: 758 PVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKMEH 817 Query: 465 RIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVE 286 R + K+ + V+ ++ + E KV+N +E + E +Q L +PG V Sbjct: 818 RSV-KKAGIEVQEIKEAEAVVE---PKVENKPTSSELQKMQE-----KQKLSTEPGSGVS 868 Query: 285 GTTIETVTPIP 253 I T+ IP Sbjct: 869 VVLITTLLVIP 879
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 30.0 bits (66), Expect = 6.8 Identities = 28/124 (22%), Positives = 46/124 (37%) Frame = -2 Query: 551 TSSTTAAPDACGXXXXXXXXXXXXXRLETASSGKGSMSVLSMCSHPGVLRSSA*GK*RMT 372 +++TT +P + ++SS S S S S SS Sbjct: 148 STTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------- 199 Query: 371 SSRRKPRHVVRSSAPRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVVTRVFGLSACT 192 SS V +S+ SHS+ + S S SRPS + +M S ++ + Sbjct: 200 SSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSS 259 Query: 191 TSSN 180 +SS+ Sbjct: 260 SSSS 263
>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C| Length = 1103 Score = 30.0 bits (66), Expect = 6.8 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 329 PRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVV 222 P GS +A R+P +RP P L W +SR++ Sbjct: 893 PEGSEAAEEAAPSDRMPSARPPSPPLSSWERVSRLM 928
>HN_PI3HU (P12563) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 8.9 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -1 Query: 432 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 253 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLTMPTTVDGCVRTP 194 Query: 252 YDVVNDLKGGY 220 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HA (P12561) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 8.9 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -1 Query: 432 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 253 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 252 YDVVNDLKGGY 220 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3H4 (P08492) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 8.9 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -1 Query: 432 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 253 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 252 YDVVNDLKGGY 220 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>RL21_THEAC (Q9HIN8) 50S ribosomal protein L21e| Length = 98 Score = 29.6 bits (65), Expect = 8.9 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = -1 Query: 624 YLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 520 +++ ++ G+ V + + +VH GMP+ + G TG V Sbjct: 31 FMQEFEPGDRVAIDIEPSVHAGMPYHRFQGYTGVV 65 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,714,866 Number of Sequences: 219361 Number of extensions: 1948262 Number of successful extensions: 5434 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 5229 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5433 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
