Clone Name | rbasd18j09 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 125 bits (63), Expect = 1e-25 Identities = 156/187 (83%) Strand = Plus / Minus Query: 199 acgaggaagaaggcatcgagggcgaagaagatgatggtgtggatgaggatggaaacgacg 258 |||||||||| ||| |||||||||||||||| ||||||||||| ||||||||| |||||| Sbjct: 158721 acgaggaagatggcgtcgagggcgaagaagaggatggtgtggacgaggatggagacgacg 158662 Query: 259 ctcgtgtggaattttccgcactcgatcgtccgcgatttgccagggatctggaagaggagc 318 || || ||||| || ||| |||||||| || | ||||| || |||||||| || ||| Sbjct: 158661 ctggtctggaacttgccgaactcgatcaacctgcacttgcctggtatctggaacagaagc 158602 Query: 319 cccggggacagaaggatgaagagcatgaaggagatgagcacaggactccagtcctgcatc 378 ||||| ||||| |||||||| |||| | || || ||||| |||| ||||||||||||| Sbjct: 158601 cccggcgacagcaggatgaacagcacccaagatatcagcaccggaccccagtcctgcatc 158542 Query: 379 ttcttct 385 ||||||| Sbjct: 158541 ttcttct 158535
>dbj|AK062996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-G10, full insert sequence Length = 517 Score = 125 bits (63), Expect = 1e-25 Identities = 156/187 (83%) Strand = Plus / Minus Query: 199 acgaggaagaaggcatcgagggcgaagaagatgatggtgtggatgaggatggaaacgacg 258 |||||||||| ||| |||||||||||||||| ||||||||||| ||||||||| |||||| Sbjct: 295 acgaggaagatggcgtcgagggcgaagaagaggatggtgtggacgaggatggagacgacg 236 Query: 259 ctcgtgtggaattttccgcactcgatcgtccgcgatttgccagggatctggaagaggagc 318 || || ||||| || ||| |||||||| || | ||||| || |||||||| || ||| Sbjct: 235 ctggtctggaacttgccgaactcgatcaacctgcacttgcctggtatctggaacagaagc 176 Query: 319 cccggggacagaaggatgaagagcatgaaggagatgagcacaggactccagtcctgcatc 378 ||||| ||||| |||||||| |||| | || || ||||| |||| ||||||||||||| Sbjct: 175 cccggcgacagcaggatgaacagcacccaagatatcagcaccggaccccagtcctgcatc 116 Query: 379 ttcttct 385 ||||||| Sbjct: 115 ttcttct 109
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 125 bits (63), Expect = 1e-25 Identities = 156/187 (83%) Strand = Plus / Minus Query: 199 acgaggaagaaggcatcgagggcgaagaagatgatggtgtggatgaggatggaaacgacg 258 |||||||||| ||| |||||||||||||||| ||||||||||| ||||||||| |||||| Sbjct: 40905 acgaggaagatggcgtcgagggcgaagaagaggatggtgtggacgaggatggagacgacg 40846 Query: 259 ctcgtgtggaattttccgcactcgatcgtccgcgatttgccagggatctggaagaggagc 318 || || ||||| || ||| |||||||| || | ||||| || |||||||| || ||| Sbjct: 40845 ctggtctggaacttgccgaactcgatcaacctgcacttgcctggtatctggaacagaagc 40786 Query: 319 cccggggacagaaggatgaagagcatgaaggagatgagcacaggactccagtcctgcatc 378 ||||| ||||| |||||||| |||| | || || ||||| |||| ||||||||||||| Sbjct: 40785 cccggcgacagcaggatgaacagcacccaagatatcagcaccggaccccagtcctgcatc 40726 Query: 379 ttcttct 385 ||||||| Sbjct: 40725 ttcttct 40719
>dbj|AK071540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101E05, full insert sequence Length = 683 Score = 117 bits (59), Expect = 3e-23 Identities = 155/187 (82%) Strand = Plus / Minus Query: 199 acgaggaagaaggcatcgagggcgaagaagatgatggtgtggatgaggatggaaacgacg 258 |||||||||| ||| || ||||||||||||| ||||||||||| ||||||||| |||||| Sbjct: 298 acgaggaagatggcgtctagggcgaagaagaggatggtgtggacgaggatggagacgacg 239 Query: 259 ctcgtgtggaattttccgcactcgatcgtccgcgatttgccagggatctggaagaggagc 318 || || ||||| || ||| |||||||| || | ||||| || |||||||| || ||| Sbjct: 238 ctggtctggaacttgccgaactcgatcaacctgcacttgcctggtatctggaacagaagc 179 Query: 319 cccggggacagaaggatgaagagcatgaaggagatgagcacaggactccagtcctgcatc 378 ||||| ||||| |||||||| |||| | || || ||||| |||| ||||||||||||| Sbjct: 178 cccggcgacagcaggatgaacagcacccaagatatcagcaccggaccccagtcctgcatc 119 Query: 379 ttcttct 385 ||||||| Sbjct: 118 ttcttct 112
>ref|XM_475056.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 219 Score = 109 bits (55), Expect = 7e-21 Identities = 148/179 (82%) Strand = Plus / Minus Query: 199 acgaggaagaaggcatcgagggcgaagaagatgatggtgtggatgaggatggaaacgacg 258 |||||||||| ||| |||||||||||||||| ||||||||||| ||||||||| |||||| Sbjct: 179 acgaggaagatggcgtcgagggcgaagaagaggatggtgtggacgaggatggagacgacg 120 Query: 259 ctcgtgtggaattttccgcactcgatcgtccgcgatttgccagggatctggaagaggagc 318 || || ||||| || ||| |||||||| || | ||||| || |||||||| || ||| Sbjct: 119 ctggtctggaacttgccgaactcgatcaacctgcacttgcctggtatctggaacagaagc 60 Query: 319 cccggggacagaaggatgaagagcatgaaggagatgagcacaggactccagtcctgcat 377 ||||| ||||| |||||||| |||| | || || ||||| |||| |||||||||||| Sbjct: 59 cccggcgacagcaggatgaacagcacccaagatatcagcaccggaccccagtcctgcat 1
>gb|AY108687.1| Zea mays PCO149432 mRNA sequence Length = 666 Score = 79.8 bits (40), Expect = 7e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 216 gagggcgaagaagatgatggtgtggatgaggatggaaacgacgctcgtgtggaattttcc 275 |||||||||| |||||| || ||||||||||||||| | | |||| || ||||| || || Sbjct: 316 gagggcgaagtagatgacggcgtggatgaggatggagaggccgctggtctggaagttgcc 257 Query: 276 gcactcgatcgtccgcgatttgccagggatctggaagaggagccccggggacagaaggat 335 | ||||||| |||| ||||| |||||||||||||| || |||||||| || ||||| Sbjct: 256 gaactcgatgatccggcccttgccggggatctggaagagcaggcccggggagagcaggat 197 Query: 336 gaagagca 343 |||||||| Sbjct: 196 gaagagca 189
>gb|AC084157.2| Caenorhabditis elegans cosmid Y46E12BR, complete sequence Length = 19567 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||||||| ||||||||||||||| Sbjct: 14737 tcttcttcttcttctgatgatgatgatgatga 14768 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||||||||||||||| Sbjct: 14734 tcttcttcttcttcttctgatgatgatgatga 14765
>gb|AF468595.1| Crassostrea gigas clone c080 microsatellite sequence Length = 553 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||||||| ||||||||||||||| Sbjct: 309 tcttcttcttcttctgatgatgatgatgatga 340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||||||| ||||||||||||||| Sbjct: 266 tcttcttcttcttctgatgatgatgatgatga 297 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||||||||||||||| Sbjct: 306 tcttcttcttcttcttctgatgatgatgatga 337 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||||||||||||||| Sbjct: 263 tcttcttcttcttcttctgatgatgatgatga 294 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatgact 410 |||||||||||| || ||||||||||||||||| Sbjct: 269 tcttcttcttctgatgatgatgatgatgatgact 302 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||| || ||||||||||||||| Sbjct: 312 tcttcttcttctgatgatgatgatgatgatga 343
>gb|AF496601.1| Crassostrea gigas clone c080 microsatellite sequence Length = 554 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||||||| ||||||||||||||| Sbjct: 309 tcttcttcttcttctgatgatgatgatgatga 340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||||||| ||||||||||||||| Sbjct: 266 tcttcttcttcttctgatgatgatgatgatga 297 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||||||||||||||| Sbjct: 306 tcttcttcttcttcttctgatgatgatgatga 337 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||||||||||||||| Sbjct: 263 tcttcttcttcttcttctgatgatgatgatga 294 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatgact 410 |||||||||||| || ||||||||||||||||| Sbjct: 269 tcttcttcttctgatgatgatgatgatgatgact 302 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||| || ||||||||||||||| Sbjct: 312 tcttcttcttctgatgatgatgatgatgatga 343
>gb|AF496600.1| Crassostrea gigas clone c094 microsatellite sequence Length = 557 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||||||| ||||||||||||||| Sbjct: 309 tcttcttcttcttctgatgatgatgatgatga 340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||||||| ||||||||||||||| Sbjct: 266 tcttcttcttcttctgatgatgatgatgatga 297 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||||||||||||||| Sbjct: 306 tcttcttcttcttcttctgatgatgatgatga 337 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||||||||||||||| Sbjct: 263 tcttcttcttcttcttctgatgatgatgatga 294 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||| || ||||||||||||||| Sbjct: 312 tcttcttcttctgatgatgatgatgatgatga 343 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||| || ||||||||||||||| Sbjct: 269 tcttcttcttctgatgatgatgatgatgatga 300
>gb|AF496599.1| Crassostrea gigas clone c062 microsatellite sequence Length = 557 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||||||| ||||||||||||||| Sbjct: 309 tcttcttcttcttctgatgatgatgatgatga 340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||||||| ||||||||||||||| Sbjct: 266 tcttcttcttcttctgatgatgatgatgatga 297 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||||||||||||||| Sbjct: 306 tcttcttcttcttcttctgatgatgatgatga 337 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||||||||||||||| Sbjct: 263 tcttcttcttcttcttctgatgatgatgatga 294 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||| || ||||||||||||||| Sbjct: 312 tcttcttcttctgatgatgatgatgatgatga 343 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 |||||||||||| || ||||||||||||||| Sbjct: 269 tcttcttcttctgatgatgatgatgatgatga 300
>ref|XM_631757.1| Dictyostelium discoideum hypothetical protein (DDB0215958), partial mRNA Length = 3036 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 385 ttcttctggtgatgatgatgatga 408 |||||||||||||||||||||||| Sbjct: 1761 ttcttctggtgatgatgatgatga 1738
>emb|BX293996.16| Zebrafish DNA sequence from clone DKEY-38J20 in linkage group 1, complete sequence Length = 237723 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||| || ||||||||||||||| Sbjct: 75762 tcttcttcttcttatgatgatgatgatgatga 75793 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||||||||||||||| Sbjct: 75759 tcttcttcttcttcttatgatgatgatgatga 75790
>gb|AF506905.1| Solidago sempervirens clone SS5A microsatellite sequence Length = 261 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||||||||||||||| Sbjct: 46 tcttcttcttcttcttttgatgatgatgatga 15
>emb|BX537165.3| Zebrafish DNA sequence from clone CH211-263O4 in linkage group 1, complete sequence Length = 158346 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||||||||||||||| Sbjct: 96397 tcttcttcttcttcttatgatgatgatgatga 96366 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatgatgat 406 ||||||||||||| || ||||||||||||| Sbjct: 96394 tcttcttcttcttatgatgatgatgatgat 96365
>gb|AC169177.4| Medicago truncatula chromosome 7 BAC clone mth2-1p4, complete sequence Length = 124443 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 381 cttcttcttctggtgatgatgatgatgactactcaa 416 ||||| |||||| |||||||||||||||| |||||| Sbjct: 88117 cttctacttctgatgatgatgatgatgacgactcaa 88152
>gb|AY023488.1| Oryza sativa microsatellite MRG5813 containing (TCT)X9, closest to marker S1615, genomic sequence Length = 227 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Plus Query: 355 agcacaggactccagtcctgcatcttcttct 385 ||||| |||| |||||||||||||||||||| Sbjct: 24 agcaccggaccccagtcctgcatcttcttct 54
>gb|AC133608.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0085G12, complete sequence Length = 121470 Score = 46.1 bits (23), Expect = 0.092 Identities = 38/43 (88%) Strand = Plus / Minus Query: 301 gggatctggaagaggagccccggggacagaaggatgaagagca 343 ||||||||||| || |||||||| ||||| |||||||| |||| Sbjct: 99163 gggatctggaacagcagccccggcgacagcaggatgaacagca 99121
>gb|AC135569.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018F17, complete sequence Length = 104291 Score = 46.1 bits (23), Expect = 0.092 Identities = 38/43 (88%) Strand = Plus / Minus Query: 301 gggatctggaagaggagccccggggacagaaggatgaagagca 343 ||||||||||| || |||||||| ||||| |||||||| |||| Sbjct: 5463 gggatctggaacagcagccccggcgacagcaggatgaacagca 5421
>ref|XM_419972.1| PREDICTED: Gallus gallus similar to Syndecan-1 precursor (SYND1) (CD138 antigen) (LOC421960), mRNA Length = 2978 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 385 ttcttctggtgatgatgatgatg 407 ||||||||||||||||||||||| Sbjct: 63 ttcttctggtgatgatgatgatg 85
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.092 Identities = 38/43 (88%) Strand = Plus / Minus Query: 301 gggatctggaagaggagccccggggacagaaggatgaagagca 343 ||||||||||| || |||||||| ||||| |||||||| |||| Sbjct: 17031507 gggatctggaacagcagccccggcgacagcaggatgaacagca 17031465
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 381 cttcttcttctggtgatgatgatgatg 407 |||||||||||| |||||||||||||| Sbjct: 2507925 cttcttcttctgatgatgatgatgatg 2507899 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatg 401 |||||||||||||||| |||||||| Sbjct: 31406271 tcttcttcttcttctgatgatgatg 31406247 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 219 ggcgaagaagatgatggtgtggatgaggatgg 250 |||||||||||||| |||||||| || ||||| Sbjct: 18311474 ggcgaagaagatgagggtgtggacgaagatgg 18311443
>dbj|AP005649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0064G16 Length = 166453 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 381 cttcttcttctggtgatgatgatgatg 407 |||||||||||| |||||||||||||| Sbjct: 123846 cttcttcttctgatgatgatgatgatg 123820
>dbj|AK062973.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-E07, full insert sequence Length = 562 Score = 46.1 bits (23), Expect = 0.092 Identities = 38/43 (88%) Strand = Plus / Minus Query: 301 gggatctggaagaggagccccggggacagaaggatgaagagca 343 ||||||||||| || |||||||| ||||| |||||||| |||| Sbjct: 179 gggatctggaacagcagccccggcgacagcaggatgaacagca 137
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.092 Identities = 38/43 (88%) Strand = Plus / Minus Query: 301 gggatctggaagaggagccccggggacagaaggatgaagagca 343 ||||||||||| || |||||||| ||||| |||||||| |||| Sbjct: 17126208 gggatctggaacagcagccccggcgacagcaggatgaacagca 17126166
>ref|NM_103599.1| Arabidopsis thaliana protein binding AT1G45616 mRNA, complete cds Length = 2985 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 383 tcttcttctggtgatgatgatgatga 408 |||||||||| ||||||||||||||| Sbjct: 2834 tcttcttctgatgatgatgatgatga 2809
>gb|AY680387.1| Pinus taeda homeobox transcription factor KN4 (Kn4) gene, exons 1, 2, 3 and partial cds Length = 1466 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 388 ttctggtgatgatgatgatgac 409 |||||||||||||||||||||| Sbjct: 228 ttctggtgatgatgatgatgac 207
>ref|XM_631011.1| Dictyostelium discoideum hypothetical protein (DDB0188566), partial mRNA Length = 5901 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 382 ttcttcttctggtgatgatgatgatg 407 |||||||| ||||||||||||||||| Sbjct: 5004 ttcttcttttggtgatgatgatgatg 4979
>ref|XM_630035.1| Dictyostelium discoideum hypothetical protein (DDB0219662), partial mRNA Length = 3204 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 385 ttcttctggtgatgatgatgat 406 |||||||||||||||||||||| Sbjct: 420 ttcttctggtgatgatgatgat 399
>gb|AC160545.8| Mus musculus chromosome 1, clone RP23-217K18, complete sequence Length = 240081 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgactac 412 |||||||||||||||||||||| Sbjct: 191580 tggtgatgatgatgatgactac 191559
>ref|XM_477594.1| Oryza sativa (japonica cultivar-group), mRNA Length = 237 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Minus Query: 306 ctggaagaggagccccggggacagaaggatgaagagca 343 |||||| |||| |||||| |||||||||||||| |||| Sbjct: 81 ctggaacaggaaccccggtgacagaaggatgaacagca 44
>ref|XM_716037.1| Candida albicans SC5314 hypothetical protein (CaO19_8505), mRNA Length = 4194 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 387 cttctggtgatgatgatgatga 408 |||||||||||||||||||||| Sbjct: 3068 cttctggtgatgatgatgatga 3089
>ref|XM_716036.1| Candida albicans SC5314 hypothetical protein (CaO19_8504), mRNA Length = 366 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cttctggtgatgatgatgatga 408 |||||||||||||||||||||| Sbjct: 347 cttctggtgatgatgatgatga 326
>ref|XM_715916.1| Candida albicans SC5314 hypothetical protein (CaO19_886), mRNA Length = 4194 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 387 cttctggtgatgatgatgatga 408 |||||||||||||||||||||| Sbjct: 3068 cttctggtgatgatgatgatga 3089
>ref|XM_715915.1| Candida albicans SC5314 hypothetical protein (CaO19_885), mRNA Length = 366 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cttctggtgatgatgatgatga 408 |||||||||||||||||||||| Sbjct: 347 cttctggtgatgatgatgatga 326
>gb|AC107846.4| Mus musculus chromosome 1, clone RP23-309I23, complete sequence Length = 178870 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgactac 412 |||||||||||||||||||||| Sbjct: 124946 tggtgatgatgatgatgactac 124967
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Minus Query: 306 ctggaagaggagccccggggacagaaggatgaagagca 343 |||||| |||| |||||| |||||||||||||| |||| Sbjct: 11736093 ctggaacaggaaccccggtgacagaaggatgaacagca 11736056
>gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G19 genomic sequence, complete sequence Length = 133379 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 383 tcttcttctggtgatgatgatgatga 408 |||||||||| ||||||||||||||| Sbjct: 15624 tcttcttctgatgatgatgatgatga 15649
>dbj|AP006344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0680C01 Length = 145580 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Minus Query: 306 ctggaagaggagccccggggacagaaggatgaagagca 343 |||||| |||| |||||| |||||||||||||| |||| Sbjct: 94252 ctggaacaggaaccccggtgacagaaggatgaacagca 94215
>emb|AL096821.3|CNS00YVG Human chromosome 14 DNA sequence BAC R-677J5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 209111 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 387 cttctggtgatgatgatgatga 408 |||||||||||||||||||||| Sbjct: 164567 cttctggtgatgatgatgatga 164546
>ref|NM_121662.2| Arabidopsis thaliana KAN (KANADI); transcription factor AT5G16560 (KAN) mRNA, complete cds Length = 2046 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgacta 411 ||||||||||||||||||||| Sbjct: 267 tggtgatgatgatgatgacta 247
>ref|NM_126607.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G05940 mRNA, complete cds Length = 1702 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 tgatgatgatgatgactactc 414 ||||||||||||||||||||| Sbjct: 1260 tgatgatgatgatgactactc 1240
>ref|XM_632636.1| Dictyostelium discoideum hypothetical protein (DDB0186950), partial mRNA Length = 1149 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 385 ttcttctggtgatgatgatgatgac 409 |||||||| |||||||||||||||| Sbjct: 435 ttcttctgatgatgatgatgatgac 411
>ref|XM_641631.1| Dictyostelium discoideum hypothetical protein (DDB0190983), partial mRNA Length = 4644 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 ttcttcttctggtgatgatgatgat 406 |||||||| |||||||||||||||| Sbjct: 2810 ttcttcttttggtgatgatgatgat 2786
>ref|XM_641542.1| Dictyostelium discoideum hypothetical protein (DDB0190895), partial mRNA Length = 2307 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatg 401 |||||||||||||||| |||||||| Sbjct: 788 tcttcttcttcttctgatgatgatg 764 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatgatg 404 ||||||||||||||| ||||||||||| Sbjct: 791 tcttcttcttcttcttctgatgatgatg 764
>ref|XM_640222.1| Dictyostelium discoideum hypothetical protein (DDB0217024), partial mRNA Length = 1644 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 ttctggtgatgatgatgatga 408 ||||||||||||||||||||| Sbjct: 1104 ttctggtgatgatgatgatga 1084
>ref|XM_467781.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatg 401 |||||||||||||||| |||||||| Sbjct: 676 tcttcttcttcttctgatgatgatg 700
>gb|AC102509.6| Mus musculus chromosome 7, clone RP24-327G7, complete sequence Length = 186990 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 catcttcttcttcttctggtg 395 ||||||||||||||||||||| Sbjct: 18818 catcttcttcttcttctggtg 18838
>ref|XM_716595.1| Candida albicans SC5314 putative nucleolar ribosome biogenesis factor Kri1p (CaO19_1609), mRNA Length = 2001 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 380 tcttcttcttctggtgatgatgatgatga 408 |||||||| |||| ||||||||||||||| Sbjct: 224 tcttcttcctctgatgatgatgatgatga 196
>ref|XM_716475.1| Candida albicans SC5314 putative nucleolar ribosome biogenesis factor Kri1p (CaO19_9177), mRNA Length = 2007 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 380 tcttcttcttctggtgatgatgatgatga 408 |||||||| |||| ||||||||||||||| Sbjct: 236 tcttcttcctctgatgatgatgatgatga 208
>gb|DQ333953.1|DQ333952S2 Lupinus angustifolius LEGCYC1B gene, partial cds, 3' fragment Length = 612 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 ttctggtgatgatgatgatga 408 ||||||||||||||||||||| Sbjct: 360 ttctggtgatgatgatgatga 340
>gb|BT013043.1| Lycopersicon esculentum clone 114293R, mRNA sequence Length = 1090 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 382 ttcttcttctggtgatgatgatgatgact 410 |||||| ||| |||||||||||||||||| Sbjct: 221 ttcttcatcttgtgatgatgatgatgact 193
>gb|AC168204.1| Medicago truncatula chromosome 7 BAC clone mth2-64h15, complete sequence Length = 45758 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 cttcttcttctggtgatgatgatgatgac 409 ||||| |||||| |||||||||||||||| Sbjct: 42628 cttctacttctgatgatgatgatgatgac 42600
>gb|AC116963.2| Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence Length = 257109 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 ttctggtgatgatgatgatga 408 ||||||||||||||||||||| Sbjct: 241192 ttctggtgatgatgatgatga 241172
>emb|CR846084.6| Zebrafish DNA sequence from clone DKEYP-121E7 in linkage group 3, complete sequence Length = 77230 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 caaacagagagaaatagcaaa 121 ||||||||||||||||||||| Sbjct: 30475 caaacagagagaaatagcaaa 30495
>gb|AC132333.3| Mus musculus BAC clone RP24-226I7 from chromosome 7, complete sequence Length = 170540 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 tcttctggtgatgatgatgat 406 ||||||||||||||||||||| Sbjct: 88234 tcttctggtgatgatgatgat 88254
>gb|AC111188.8| Homo sapiens chromosome 11, clone RP11-179A10, complete sequence Length = 146308 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 ttctggtgatgatgatgatga 408 ||||||||||||||||||||| Sbjct: 55435 ttctggtgatgatgatgatga 55455
>ref|XM_757907.1| Theileria parva strain Muguga chromosome 3 hypothetical protein (TP03_0875) partial mRNA Length = 1530 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 catcttcttcttcttctggtg 395 ||||||||||||||||||||| Sbjct: 106 catcttcttcttcttctggtg 86
>ref|XM_757912.1| Theileria parva strain Muguga chromosome 3 hypothetical protein (TP03_0880) partial mRNA Length = 1830 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 catcttcttcttcttctggtg 395 ||||||||||||||||||||| Sbjct: 106 catcttcttcttcttctggtg 86
>gb|AC102494.6| Mus musculus chromosome 7, clone RP24-565J5, complete sequence Length = 161721 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 catcttcttcttcttctggtg 395 ||||||||||||||||||||| Sbjct: 161365 catcttcttcttcttctggtg 161385
>emb|AL136139.6| Human DNA sequence from clone RP4-761I2 on chromosome 6 Contains a novel gene, the 3' end of the NEDD9 gene for neural precursor cell expressed (developmentally down-regulated) 9 and three CpG islands, complete sequence Length = 121724 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgat 397 ||||||||||||||||||||| Sbjct: 37406 tcttcttcttcttctggtgat 37386
>ref|XM_788328.1| PREDICTED: Strongylocentrotus purpuratus similar to TBP-associated factor 2 (LOC588654), mRNA Length = 837 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatg 401 ||||||||||||| ||||||||||| Sbjct: 760 tcttcttcttcttttggtgatgatg 736
>gb|AY113963.1| Arabidopsis thaliana putative protein kinase (At2g05940) mRNA, complete cds Length = 1420 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 tgatgatgatgatgactactc 414 ||||||||||||||||||||| Sbjct: 1223 tgatgatgatgatgactactc 1203
>gb|AY056245.1| Arabidopsis thaliana putative protein kinase (At2g05940) mRNA, complete cds Length = 1560 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 tgatgatgatgatgactactc 414 ||||||||||||||||||||| Sbjct: 1262 tgatgatgatgatgactactc 1242
>emb|BX255277.5| Mouse DNA sequence from clone RP23-478B14 on chromosome 11, complete sequence Length = 169765 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatg 401 |||||||||||||||| |||||||| Sbjct: 96713 tcttcttcttcttctgatgatgatg 96689 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatgatg 404 ||||||||||||||| ||||||||||| Sbjct: 96716 tcttcttcttcttcttctgatgatgatg 96689
>emb|BX927346.12| Zebrafish DNA sequence from clone CH211-168M18 in linkage group 5, complete sequence Length = 141135 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 caaacagagagaaatagcaaa 121 ||||||||||||||||||||| Sbjct: 60208 caaacagagagaaatagcaaa 60228
>emb|AL732587.8| Mouse DNA sequence from clone RP23-268K22 on chromosome 11 Contains the 3' end of the Galnt9 gene for UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 9, a novel gene, a novel gene (2310079P12Rik), the Hand1 gene for heart and neural crest derivatives expressed transcript 1 (eHAND, Thing1), a mitochondrial ribosomal protein S16 pseudogene (Mrps16) and two CpG islands, complete sequence Length = 132671 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgacta 411 ||||||||||||||||||||| Sbjct: 16529 tggtgatgatgatgatgacta 16549
>emb|BX936308.13| Zebrafish DNA sequence from clone CH211-152F6 in linkage group 3, complete sequence Length = 110020 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 caaacagagagaaatagcaaa 121 ||||||||||||||||||||| Sbjct: 21929 caaacagagagaaatagcaaa 21949
>emb|BX530721.14| Zebrafish DNA sequence from clone CH211-195B13 in linkage group 19, complete sequence Length = 201156 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 caaacagagagaaatagcaaa 121 ||||||||||||||||||||| Sbjct: 126857 caaacagagagaaatagcaaa 126877
>gb|AC092530.35| Rattus norvegicus clone rp32-28p17, complete sequence Length = 221618 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgacta 411 ||||||||||||||||||||| Sbjct: 71830 tggtgatgatgatgatgacta 71810
>gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete sequence Length = 108135 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 cttcttcttctggtgatgatgatgatgac 409 ||||| |||||| |||||||||||||||| Sbjct: 91073 cttctacttctgatgatgatgatgatgac 91101
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete sequence Length = 121160 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 tgatgatgatgatgactactc 414 ||||||||||||||||||||| Sbjct: 71593 tgatgatgatgatgactactc 71613
>gb|AC104740.2| Homo sapiens chromosome 3 clone RP11-46D21, complete sequence Length = 156801 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgacta 411 ||||||||||||||||||||| Sbjct: 86302 tggtgatgatgatgatgacta 86322
>emb|BX469907.11| Zebrafish DNA sequence from clone DKEY-32D10 in linkage group 5, complete sequence Length = 162623 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 caaacagagagaaatagcaaa 121 ||||||||||||||||||||| Sbjct: 87721 caaacagagagaaatagcaaa 87741
>gb|AY030192.1| Arabidopsis thaliana clone A1-2 KANADI protein (KAN) mRNA, complete cds Length = 1645 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgacta 411 ||||||||||||||||||||| Sbjct: 267 tggtgatgatgatgatgacta 247
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 384 cttcttctggtgatgatgatgatga 408 ||||||||| ||||||||||||||| Sbjct: 28219504 cttcttctgatgatgatgatgatga 28219528 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 ttcttcttctggtgatgatga 402 ||||||||||||||||||||| Sbjct: 1540908 ttcttcttctggtgatgatga 1540888
>emb|BX830211.1|CNS0A1IH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZC07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgacta 411 ||||||||||||||||||||| Sbjct: 210 tggtgatgatgatgatgacta 190
>gb|AC140918.1| Caenorhabditis briggsae cosmid CB020L07, complete sequence Length = 104788 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 tgcatcttcttcttcttctgg 393 ||||||||||||||||||||| Sbjct: 50697 tgcatcttcttcttcttctgg 50717
>gb|AC167467.1| Mus musculus BAC clone RP23-158E17 from chromosome 9, complete sequence Length = 212426 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatgac 409 ||||||||||||||||||||| Sbjct: 51365 tctggtgatgatgatgatgac 51345
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 216 gagggcgaagaagatgatggtgtgg 240 |||||||||||||||||||| |||| Sbjct: 1464611 gagggcgaagaagatgatggggtgg 1464587
>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03 Length = 119796 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatg 401 |||||||||||||||| |||||||| Sbjct: 88845 tcttcttcttcttctgatgatgatg 88821
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 384 cttcttctggtgatgatgatgatga 408 ||||||||| ||||||||||||||| Sbjct: 17533 cttcttctgatgatgatgatgatga 17557
>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0009H10 Length = 175754 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 384 cttcttctggtgatgatgatgatga 408 ||||||||| ||||||||||||||| Sbjct: 150410 cttcttctgatgatgatgatgatga 150434
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0538C01 Length = 155643 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 ttcttcttctggtgatgatga 402 ||||||||||||||||||||| Sbjct: 69632 ttcttcttctggtgatgatga 69612
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatg 401 |||||||||||||||| |||||||| Sbjct: 41668 tcttcttcttcttctgatgatgatg 41644
>gb|AY667451.1| Selaginella kraussiana KNOTTED1-like protein (KNOX3) mRNA, complete cds Length = 1318 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 tgatgatgatgatgactactc 414 ||||||||||||||||||||| Sbjct: 245 tgatgatgatgatgactactc 225
>dbj|AB005242.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQK4 Length = 82001 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgacta 411 ||||||||||||||||||||| Sbjct: 77870 tggtgatgatgatgatgacta 77890
>emb|Z93387.1|CET02E9 Caenorhabditis elegans Cosmid T02E9, complete sequence Length = 34263 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 catcttcttcttcttctggtg 395 ||||||||||||||||||||| Sbjct: 8218 catcttcttcttcttctggtg 8238
>dbj|AP006419.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT43O18, TM0307, complete sequence Length = 119858 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 tgatgatgatgatgactactc 414 ||||||||||||||||||||| Sbjct: 75764 tgatgatgatgatgactactc 75744
>dbj|AP004469.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT15D01, TM0004a, complete sequence Length = 92631 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 376 atcttcttcttcttctggtgatgatgatgatga 408 ||||| ||||| ||||| ||||||||||||||| Sbjct: 17294 atcttgttcttgttctgatgatgatgatgatga 17326
>gb|AC105163.12| Mus musculus chromosome 3, clone RP24-163F11, complete sequence Length = 167766 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 93485 tggtgatgatgatgatgact 93504
>gb|AC123673.7| Mus musculus chromosome 1, clone RP23-258D13, complete sequence Length = 191401 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 89906 tggtgatgatgatgatgact 89925
>gb|AC102297.12| Mus musculus chromosome 1, clone RP24-392K18, complete sequence Length = 167248 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtga 396 |||||||||||||||||||| Sbjct: 112200 tcttcttcttcttctggtga 112219
>ref|NM_102005.3| Arabidopsis thaliana unknown protein AT1G21560 mRNA, complete cds Length = 1442 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 198 tggtgatgatgatgatgact 217
>ref|NM_202996.1| Arabidopsis thaliana cysteine-type peptidase AT5G03330 transcript variant AT5G03330.2 mRNA, complete cds Length = 1288 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 201 tctggtgatgatgatgatga 182
>ref|NM_120411.3| Arabidopsis thaliana cysteine-type peptidase AT5G03330 transcript variant AT5G03330.1 mRNA, complete cds Length = 1463 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 376 tctggtgatgatgatgatga 357
>ref|NM_120840.2| Arabidopsis thaliana DNA binding / transcription factor AT5G07580 mRNA, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 464 tctggtgatgatgatgatga 445
>gb|BC107957.1| Danio rerio TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, mRNA (cDNA clone MGC:123088 IMAGE:5409365), complete cds Length = 4430 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||| | |||||||||| Sbjct: 3670 tcttcttcttcttcttgtgctcatgatgatga 3639
>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence Length = 203728 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 166505 ctgcatcttcttcttcttct 166524
>ref|XM_632350.1| Dictyostelium discoideum hypothetical protein (DDB0187237), partial mRNA Length = 414 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 23 tggtgatgatgatgatgact 4
>ref|XM_632248.1| Dictyostelium discoideum hypothetical protein (DDB0219211), partial mRNA Length = 2187 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 tgatgatgatgatgactact 413 |||||||||||||||||||| Sbjct: 1259 tgatgatgatgatgactact 1240
>ref|XM_642304.1| Dictyostelium discoideum hypothetical protein (DDB0189627), partial mRNA Length = 2535 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 tgatgatgatgatgactact 413 |||||||||||||||||||| Sbjct: 545 tgatgatgatgatgactact 526
>ref|XM_549822.1| Oryza sativa (japonica cultivar-group), mRNA Length = 652 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 62 ctgcatcttcttcttcttct 43
>ref|XM_640268.1| Dictyostelium discoideum hypothetical protein (DDB0203662), partial mRNA Length = 2148 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 1185 tggtgatgatgatgatgact 1166
>ref|XM_638425.1| Dictyostelium discoideum hypothetical protein (DDB0217700), partial mRNA Length = 3873 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtgtggatgaggatgg 250 |||||||||||||||||||| Sbjct: 1237 gatggtgtggatgaggatgg 1218 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtgtggatgaggatgg 250 |||||||||||||||||||| Sbjct: 1222 gatggtgtggatgaggatgg 1203
>ref|XM_636892.1| Dictyostelium discoideum hypothetical protein (DDB0206214), partial mRNA Length = 3138 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 tcttcttcttctggtgatgatgat 403 ||||||||||||| |||||||||| Sbjct: 329 tcttcttcttctgatgatgatgat 306
>ref|XM_630049.1| Dictyostelium discoideum hypothetical protein (DDB0183820), partial mRNA Length = 2631 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgat 400 |||||||||||||||| ||||||| Sbjct: 989 tcttcttcttcttctgatgatgat 966
>ref|XM_469408.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1698 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tgcatcttcttcttcttctg 392 |||||||||||||||||||| Sbjct: 375 tgcatcttcttcttcttctg 356
>ref|XM_473620.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2349 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tcttcttctggtgatgatga 402 |||||||||||||||||||| Sbjct: 775 tcttcttctggtgatgatga 794
>gb|AC132935.7| Mus musculus chromosome 15, clone RP24-142P21, complete sequence Length = 140484 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 actccagtcctgcatcttcttctt 386 |||||| ||||||||||||||||| Sbjct: 27266 actccattcctgcatcttcttctt 27243
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 376 atcttcttcttcttctggtgatgatgat 403 ||||||||||||||||| || ||||||| Sbjct: 604889 atcttcttcttcttctgctgctgatgat 604916
>gb|AF054907.1| Neurospora crassa putative 5S rRNA binding ribosomal protein (crp-4) gene, complete cds Length = 2755 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 catcttcttcttcttctggt 394 |||||||||||||||||||| Sbjct: 110 catcttcttcttcttctggt 91
>gb|AY020007.1| Oryza sativa microsatellite MRG2332 containing (CT)X15, closest to marker S2008, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 129 ctgcatcttcttcttcttct 148
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 tgcatcttcttcttcttctg 392 |||||||||||||||||||| Sbjct: 38049 tgcatcttcttcttcttctg 38068
>gb|AC161609.6| Mus musculus BAC clone RP23-139D15 from chromosome 14, complete sequence Length = 219723 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 75938 tggtgatgatgatgatgact 75957
>gb|AY648781.1| Danio rerio TATA box binding protein (TBP)-associated factor 150kDa mRNA, complete cds Length = 4376 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||| | |||||||||| Sbjct: 3622 tcttcttcttcttcttgtgctcatgatgatga 3591
>gb|AC009909.6| Drosophila melanogaster clone BACR30P05, complete sequence Length = 171772 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcttctggtgatgatgatgatgac 409 ||||||| |||||||||||||||| Sbjct: 140597 tcttctgctgatgatgatgatgac 140620
>ref|XM_425261.1| PREDICTED: Gallus gallus similar to phosphoinositide-specific phospholipase C beta 1 isoform a; 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta 1; PLC-beta-1; triphosphoinositide phosphodiesterase; monophosphatidylinositol phosphodiesterase; 1-phosphatidyl-D... (LOC427687), mRNA Length = 7062 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 gtgatgatgatgatgactac 412 |||||||||||||||||||| Sbjct: 4253 gtgatgatgatgatgactac 4272
>gb|BC077255.1| Xenopus laevis bZIP transcription factor mafB, mRNA (cDNA clone MGC:79895 IMAGE:4965723), complete cds Length = 3305 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ttctggtgatgatgatgatg 407 |||||||||||||||||||| Sbjct: 862 ttctggtgatgatgatgatg 843
>gb|AC150555.1| Drosophila melanogaster clone BACR26G12, complete sequence Length = 164461 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 64643 tctggtgatgatgatgatga 64662
>ref|XM_323671.1| Neurospora crassa OR74A hypothetical protein (NCU04332.1) partial mRNA Length = 1032 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 catcttcttcttcttctggt 394 |||||||||||||||||||| Sbjct: 407 catcttcttcttcttctggt 426
>ref|XM_955486.1| Neurospora crassa OR74A hypothetical protein (NCU04332.1) partial mRNA Length = 1032 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 catcttcttcttcttctggt 394 |||||||||||||||||||| Sbjct: 407 catcttcttcttcttctggt 426
>ref|XM_716696.1| Candida albicans SC5314 putative transcription factor (CaO19_1718), mRNA Length = 2748 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 1483 ctgcatcttcttcttcttct 1464
>ref|XM_716576.1| Candida albicans SC5314 putative transcription factor (CaO19_9286), mRNA Length = 2748 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 1483 ctgcatcttcttcttcttct 1464
>gb|AC158925.4| Mus musculus chromosome 1, clone RP23-22I7, complete sequence Length = 181897 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtga 396 |||||||||||||||||||| Sbjct: 131990 tcttcttcttcttctggtga 131971
>gb|AY811300.1| Schistosoma japonicum SJCHGC03518 protein mRNA, partial cds Length = 1139 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ctggtgatgatgatgatgac 409 |||||||||||||||||||| Sbjct: 659 ctggtgatgatgatgatgac 640
>emb|AJ249611.1|MTR249611 Medicago truncatula per gene for pectin methyl-esterase PER and pef1 gene for pectin methyl-esterase PEF1 Length = 12555 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 accatgtaacatgttgagtt 53 |||||||||||||||||||| Sbjct: 5942 accatgtaacatgttgagtt 5961
>gb|AY350715.1| Arabidopsis arenosa clone BAC Aer1B10, complete sequence Length = 78945 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 43282 tctggtgatgatgatgatga 43263
>gb|BT011828.1| Arabidopsis thaliana At5g03330 mRNA sequence Length = 1071 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 136 tctggtgatgatgatgatga 117
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 tgcatcttcttcttcttctg 392 |||||||||||||||||||| Sbjct: 27793919 tgcatcttcttcttcttctg 27793938
>gb|AC147031.2| Pan troglodytes BAC clone RP43-98M7 from 7, complete sequence Length = 175794 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 aagatgatggtgtggatgag 245 |||||||||||||||||||| Sbjct: 111183 aagatgatggtgtggatgag 111164
>gb|AC138400.12| Mus musculus chromosome 14, clone RP23-260C21, complete sequence Length = 213423 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 133243 tggtgatgatgatgatgact 133224
>ref|XM_807334.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506793.70) partial mRNA Length = 2772 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 1708 tctggtgatgatgatgatga 1689 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 tgatgatgatgatgactact 413 |||||||||||||||||||| Sbjct: 1700 tgatgatgatgatgactact 1681
>ref|XM_809487.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510609.120) partial mRNA Length = 2760 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 1696 tctggtgatgatgatgatga 1677
>gb|AC125133.2| Mus musculus BAC clone RP24-316A22 from chromosome 18, complete sequence Length = 175583 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaccaaacagagagaaatag 117 |||||||||||||||||||| Sbjct: 68882 aaccaaacagagagaaatag 68901
>gb|AC124713.5| Mus musculus BAC clone RP24-116N2 from chromosome 8, complete sequence Length = 184855 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatg 407 ||||||||||||||| |||||||||||||| Sbjct: 58777 tcttcttcttcttct--tgatgatgatgatg 58805
>emb|CR722806.2|CNS0GKNW Tetraodon nigroviridis full-length cDNA Length = 1568 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 gatgaagagcatgaaggagatgag 356 ||||||||| |||||||||||||| Sbjct: 192 gatgaagaggatgaaggagatgag 215
>gb|AC004907.3| Homo sapiens PAC clone RP5-853H20 from 7, complete sequence Length = 130117 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 aagatgatggtgtggatgag 245 |||||||||||||||||||| Sbjct: 103708 aagatgatggtgtggatgag 103727
>ref|XM_668703.1| Plasmodium berghei strain ANKA hypothetical protein (PB000714.03.0) partial mRNA Length = 1122 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 1021 ctgcatcttcttcttcttct 1002
>gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219585 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 149568 tggtgatgatgatgatgact 149549
>gb|AC146561.22| Medicago truncatula clone mth2-12j18, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gtcctgcatcttcttcttct 388 |||||||||||||||||||| Sbjct: 94773 gtcctgcatcttcttcttct 94754
>emb|BX901972.12| Zebrafish DNA sequence from clone DKEY-24H22 in linkage group 1, complete sequence Length = 212798 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 catgtaacatgttgagttag 55 |||||||||||||||||||| Sbjct: 194558 catgtaacatgttgagttag 194539
>emb|AL645949.16| Human DNA sequence from clone RP11-357G3 on chromosome 4, complete sequence Length = 145151 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaaggagatgagcacaggac 364 |||||||||||||||||||| Sbjct: 85295 gaaggagatgagcacaggac 85276
>emb|AL449423.14| Human DNA sequence from clone RP11-149I2 on chromosome 9 Contains the CDKN2A gene for cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4), the gene for susceptibility protein NSG-x (LOC51198), the 5' end of a variant of the MTAP gene for methylthioadenosine phosphorylase (MSAP), the 3' end of the CDKN2B gene for cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) and 4 CpG islands, complete sequence Length = 101155 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtga 396 |||||||||||||||||||| Sbjct: 24303 tcttcttcttcttctggtga 24284
>emb|AL354992.7| Human DNA sequence from clone RP11-293A1 on chromosome 9, complete sequence Length = 173911 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 aaacagagagaaatagcaaa 121 |||||||||||||||||||| Sbjct: 155936 aaacagagagaaatagcaaa 155955
>gb|AC157896.3| Mus musculus chromosome 15, clone RP23-438M9, complete sequence Length = 204574 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 actccagtcctgcatcttcttctt 386 |||||| ||||||||||||||||| Sbjct: 93796 actccattcctgcatcttcttctt 93819
>emb|AL023805.2|HS811H13 Human DNA sequence from clone RP4-811H13 on chromosome 20p12 Contains part of the PLCB4 gene for phospholipase C beta 4 and a CpG island, complete sequence Length = 137779 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 gagaaatagcaaaagaaact 128 |||||||||||||||||||| Sbjct: 36227 gagaaatagcaaaagaaact 36208
>ref|XM_788845.1| PREDICTED: Strongylocentrotus purpuratus similar to mannosidase, beta A, lysosomal (LOC589196), mRNA Length = 4275 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 2433 tggtgatgatgatgatgact 2452
>gb|AC142229.2| Homo sapiens fosmid clone XXFOS-800764H6 from 7, complete sequence Length = 38724 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 aagcagcaagaaccaaacagagag 111 ||||||||||||||| |||||||| Sbjct: 34098 aagcagcaagaaccagacagagag 34075
>ref|XM_776395.1| PREDICTED: Strongylocentrotus purpuratus similar to LIM-only protein 6 (Triple LIM domain protein 6) (LOC576048), mRNA Length = 2208 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 tgatgatgatgatgactact 413 |||||||||||||||||||| Sbjct: 2022 tgatgatgatgatgactact 2041
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggacagaaggatgaagagca 343 |||||||||||||||||||| Sbjct: 4503196 ggacagaaggatgaagagca 4503177
>gb|AC125243.4| Homo sapiens BAC clone RP13-611E1 from 7, complete sequence Length = 33304 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 aagcagcaagaaccaaacagagag 111 ||||||||||||||| |||||||| Sbjct: 23186 aagcagcaagaaccagacagagag 23163
>emb|BX294026.1|NCB7H23 Neurospora crassa DNA linkage group V BAC contig B7H23 Length = 114377 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 catcttcttcttcttctggt 394 |||||||||||||||||||| Sbjct: 113805 catcttcttcttcttctggt 113824
>emb|BX294012.1|NC80A10 Neurospora crassa DNA linkage group V Cosmid contig 80A10 Length = 161126 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 100837 tctggtgatgatgatgatga 100856
>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08, complete sequence Length = 157734 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 tcttcttctggtgatgatga 402 |||||||||||||||||||| Sbjct: 85741 tcttcttctggtgatgatga 85722
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06, complete sequence Length = 148023 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 142950 ctgcatcttcttcttcttct 142969
>emb|AL355929.1|NCB21J21 Neurospora crassa genomic DNA BAC clone B21J21 Length = 64814 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 tgatgatgatgatgactact 413 |||||||||||||||||||| Sbjct: 23072 tgatgatgatgatgactact 23053
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 21677 tctggtgatgatgatgatga 21658
>gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosome 8, complete sequence Length = 190693 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 377 tcttcttcttcttctggtgatgatgatgatg 407 ||||||||||||||| |||||||||||||| Sbjct: 149317 tcttcttcttcttct--tgatgatgatgatg 149345
>emb|CR857993.1| Pongo pygmaeus mRNA; cDNA DKFZp469F0613 (from clone DKFZp469F0613) Length = 4314 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 1436 tggtgatgatgatgatgact 1455
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 cgagggcgaagaagatgatggtgt 238 ||||||| |||||||||||||||| Sbjct: 321514 cgagggccaagaagatgatggtgt 321491
>gb|AC100844.2| Homo sapiens chromosome 18, clone RP11-659F24, complete sequence Length = 165879 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 gagagaaatagcaaaagaaa 126 |||||||||||||||||||| Sbjct: 101973 gagagaaatagcaaaagaaa 101954
>gb|AC091042.6| Homo sapiens chromosome 18, clone RP11-563H6, complete sequence Length = 149173 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 gcatcttcttcttcttctgg 393 |||||||||||||||||||| Sbjct: 89544 gcatcttcttcttcttctgg 89563
>dbj|AB108388.1| Phleum pratense DNA, SSR, microsatellite D01-A11 Length = 629 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 tgatgatgatgatgactact 413 |||||||||||||||||||| Sbjct: 352 tgatgatgatgatgactact 371
>gb|AC099564.2| Homo sapiens chromosome 1 clone RP11-359A17, complete sequence Length = 189509 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 37645 tggtgatgatgatgatgact 37664
>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome Length = 190289 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 cctgcatcttcttcttcttc 390 |||||||||||||||||||| Sbjct: 112631 cctgcatcttcttcttcttc 112650
>gb|AC109462.2| Homo sapiens chromosome 16 clone RP11-26L20, complete sequence Length = 174191 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 125667 tggtgatgatgatgatgact 125648
>gb|AC091977.3| Homo sapiens chromosome 5 clone RP11-528L24, complete sequence Length = 183494 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 ctggtgatgatgatgatgac 409 |||||||||||||||||||| Sbjct: 58181 ctggtgatgatgatgatgac 58200
>gb|AY060524.1| Arabidopsis thaliana AT5g07580/MBK20_1 mRNA, complete cds Length = 624 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 242 tctggtgatgatgatgatga 223
>gb|AC090519.3| Homo sapiens chromosome 15 clone RP11-616K22 map 15q15, complete sequence Length = 191236 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 cttctggtgatgatgatgatgact 410 ||||||| |||||||||||||||| Sbjct: 118114 cttctggagatgatgatgatgact 118091
>gb|AY052266.1| Arabidopsis thaliana AT5g07580/MBK20_1 mRNA, complete cds Length = 777 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 280 tctggtgatgatgatgatga 261
>emb|BX511003.9| Zebrafish DNA sequence from clone CH211-69F16 in linkage group 1, complete sequence Length = 151271 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 cagtcctgcatcttcttctt 386 |||||||||||||||||||| Sbjct: 44198 cagtcctgcatcttcttctt 44179
>gb|AC025043.7| Homo sapiens chromosome 15 clone RP11-516C1 map 15q15, complete sequence Length = 177028 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 cttctggtgatgatgatgatgact 410 ||||||| |||||||||||||||| Sbjct: 40862 cttctggagatgatgatgatgact 40839
>gb|AC153150.5| Mus musculus BAC clone RP23-181B14 from chromosome 13, complete sequence Length = 212639 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 57310 ctgcatcttcttcttcttct 57291
>gb|AF111102.2|MMHC214O16 Mus musculus strain 129/SvJ chromosome 17 clone BAC 214O16, complete sequence Length = 158443 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 100229 ctgcatcttcttcttcttct 100210
>gb|AC000047.6| Combined sequence from cosmids c110 and c20 derived from Homo sapiens Chromosome 9p21, complete sequence Length = 41265 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtga 396 |||||||||||||||||||| Sbjct: 33626 tcttcttcttcttctggtga 33607
>emb|BX855591.11| Zebrafish DNA sequence from clone DKEY-237H21 in linkage group 1, complete sequence Length = 131858 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 cagtcctgcatcttcttctt 386 |||||||||||||||||||| Sbjct: 19316 cagtcctgcatcttcttctt 19297
>gb|AC008319.4|AC008319 Drosophila melanogaster, chromosome 2L, region 21E-22A, BAC clone BACR38A03, complete sequence Length = 189315 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 tgcatcttcttcttcttctg 392 |||||||||||||||||||| Sbjct: 151458 tgcatcttcttcttcttctg 151477
>gb|AC009165.6|AC009165 Homo sapiens chromosome 16 clone RP11-7O2, complete sequence Length = 152225 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 76435 tggtgatgatgatgatgact 76416
>gb|AC153788.7| Mus musculus chromosome 1, clone RP24-282H12, complete sequence Length = 151799 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttctggtgatgatgatgatg 407 |||||||||||||||||||| Sbjct: 112771 ttctggtgatgatgatgatg 112790
>ref|XM_624024.1| PREDICTED: Apis mellifera similar to ENSANGP00000000661 (LOC551633), mRNA Length = 814 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttctggtgatgatgatgatg 407 |||||||||||||||||||| Sbjct: 736 ttctggtgatgatgatgatg 755
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 34936837 ctgcatcttcttcttcttct 34936856 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 tcttcttctggtgatgatga 402 |||||||||||||||||||| Sbjct: 29176282 tcttcttctggtgatgatga 29176263
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 tgcatcttcttcttcttctg 392 |||||||||||||||||||| Sbjct: 24687868 tgcatcttcttcttcttctg 24687887 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 gaagaagatgatggtgtggatgaggatg 249 ||||||||||||| || ||||||||||| Sbjct: 13739899 gaagaagatgatgatgaggatgaggatg 13739926
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 tgcatcttcttcttcttctg 392 |||||||||||||||||||| Sbjct: 27885243 tgcatcttcttcttcttctg 27885262
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 169255 ctgcatcttcttcttcttct 169274
>gb|AC068790.36| Homo sapiens 12 BAC RP11-214K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198537 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 ctggtgatgatgatgatgac 409 |||||||||||||||||||| Sbjct: 148401 ctggtgatgatgatgatgac 148420
>gb|AF202058.1|AF202058 Xenopus laevis bZIP transcription factor mafB (mafB) mRNA, complete cds Length = 1707 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ttctggtgatgatgatgatg 407 |||||||||||||||||||| Sbjct: 579 ttctggtgatgatgatgatg 560
>gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR07D23, complete sequence Length = 176610 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 111968 tctggtgatgatgatgatga 111949
>emb|AL954670.11| Zebrafish DNA sequence from clone CH211-274J15 in linkage group 10, complete sequence Length = 148765 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 catgtaacatgttgagttag 55 |||||||||||||||||||| Sbjct: 115749 catgtaacatgttgagttag 115768
>emb|BX813617.1|CNS0ADFW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1357 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 209 ctgcatcttcttcttcttct 228
>emb|BX833026.1|CNS0A27J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL30ZB09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1512 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 377 tctggtgatgatgatgatga 358
>gb|AC155938.6| Mus musculus 10 BAC RP24-421D7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 157047 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 111881 tggtgatgatgatgatgact 111900
>gb|AC149207.3| Medicago truncatula chromosome 2 BAC clone mte1-60l24, complete sequence Length = 107210 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 70191 ctgcatcttcttcttcttct 70172
>gb|AC092722.5| Homo sapiens chromosome 16 clone RP11-517M14, complete sequence Length = 189822 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 107191 tggtgatgatgatgatgact 107210
>gb|AC087216.1|AC087216 Mus musculus strain 129svj chromosome 17 clone GS1-11M9, complete sequence Length = 226594 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 44210 ctgcatcttcttcttcttct 44191
>gb|AC115598.2| Dictyostelium discoideum chromosome 2 map 581427-735498 strain AX4, complete sequence Length = 154071 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtgtggatgaggatgg 250 |||||||||||||||||||| Sbjct: 125766 gatggtgtggatgaggatgg 125747 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtgtggatgaggatgg 250 |||||||||||||||||||| Sbjct: 125751 gatggtgtggatgaggatgg 125732
>gb|AC115599.2| Dictyostelium discoideum chromosome 2 map 4229098-4354721 strain AX4, complete sequence Length = 125623 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 50656 tggtgatgatgatgatgact 50637
>gb|AC139453.10| Homo sapiens 3 BAC RP11-803B1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 149461 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 tgcatcttcttcttcttctggtga 396 |||||||| ||||||||||||||| Sbjct: 16183 tgcatcttgttcttcttctggtga 16160
>gb|BC094159.1| Xenopus laevis cDNA clone MGC:115292 IMAGE:6861249, complete cds Length = 3830 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tcacgtgattccaccatgta 41 |||||||||||||||||||| Sbjct: 1367 tcacgtgattccaccatgta 1386
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tgcatcttcttcttcttctg 392 |||||||||||||||||||| Sbjct: 19974 tgcatcttcttcttcttctg 19955
>gb|AC015447.8|AC015447 Arabidopsis thaliana chromosome I BAC F24J8 genomic sequence, complete sequence Length = 108365 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 83435 tggtgatgatgatgatgact 83454
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggacagaaggatgaagagca 343 |||||||||||||||||||| Sbjct: 4617217 ggacagaaggatgaagagca 4617198
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 167057 ctgcatcttcttcttcttct 167076
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 10925 ctgcatcttcttcttcttct 10944
>dbj|AK175488.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-91-L10 Length = 1402 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 198 tggtgatgatgatgatgact 217
>emb|AL935071.4|CNS08CCN Oryza sativa chromosome 12, . BAC OSJNBb0016C24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 87778 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 gaagaagatgatggtgtggatgaggatg 249 ||||||||||||| || ||||||||||| Sbjct: 3208 gaagaagatgatgatgaggatgaggatg 3235
>emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa0042B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145118 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 gaagaagatgatggtgtggatgaggatg 249 ||||||||||||| || ||||||||||| Sbjct: 73500 gaagaagatgatgatgaggatgaggatg 73527
>emb|BX004969.5| Zebrafish DNA sequence from clone CH211-89C12 in linkage group 7, complete sequence Length = 161142 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 agccccggggacagaaggat 335 |||||||||||||||||||| Sbjct: 93215 agccccggggacagaaggat 93196
>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052M16 Length = 145423 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 219 ggcgaagaagatgatggtgtggatgaggatgg 250 |||||||||||||| |||||||| || ||||| Sbjct: 112687 ggcgaagaagatgagggtgtggacgaagatgg 112656
>emb|AL731782.15| Mouse DNA sequence from clone RP23-180G3 on chromosome X, complete sequence Length = 209800 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 agagaaatagcaaaagaaac 127 |||||||||||||||||||| Sbjct: 94690 agagaaatagcaaaagaaac 94671
>dbj|AB010070.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK20 Length = 78172 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 455 tctggtgatgatgatgatga 436
>dbj|AK120535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128K04, full insert sequence Length = 682 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 92 ctgcatcttcttcttcttct 73
>dbj|AK105187.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-F09, full insert sequence Length = 492 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 219 ggcgaagaagatgatggtgtggatgaggatgg 250 |||||||||||||| |||||||| || ||||| Sbjct: 192 ggcgaagaagatgagggtgtggacgaagatgg 161
>gb|AC144756.3| Didelphis virginiana clone LB3-74D22, complete sequence Length = 69746 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 agaaatagcaaaagaaacta 129 |||||||||||||||||||| Sbjct: 30370 agaaatagcaaaagaaacta 30351
>dbj|AK067670.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120E23, full insert sequence Length = 1123 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 63 ctgcatcttcttcttcttct 44
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 1787550 ctgcatcttcttcttcttct 1787531
>dbj|AK065557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030D07, full insert sequence Length = 2593 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 75 ctgcatcttcttcttcttct 94
>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete sequence Length = 84361 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 42228 ctgcatcttcttcttcttct 42247
>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete sequence Length = 271507 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 52169 tctggtgatgatgatgatga 52150
>gb|AE003587.4| Drosophila melanogaster chromosome 2L, section 4 of 83 of the complete sequence Length = 314549 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tgcatcttcttcttcttctg 392 |||||||||||||||||||| Sbjct: 244234 tgcatcttcttcttcttctg 244215
>gb|AE003582.4| Drosophila melanogaster chromosome 2L, section 9 of 83 of the complete sequence Length = 295132 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcttctggtgatgatgatgatgac 409 ||||||| |||||||||||||||| Sbjct: 163455 tcttctgctgatgatgatgatgac 163478
>emb|BX572098.1| Prochlorococcus marinus MIT9313 complete genome; segment 4/7 Length = 346683 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 acaacgaggaagaaggcatc 215 |||||||||||||||||||| Sbjct: 253744 acaacgaggaagaaggcatc 253725
>emb|AL133243.3|CNS01DUG BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 559D11 of library RPCI-11 from chromosome 2 of Homo sapiens (Human) Length = 166318 Score = 40.1 bits (20), Expect = 5.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 107 gagagaaatag-caaaagaaactatagc 133 ||||||||||| |||||||||||||||| Sbjct: 163081 gagagaaatagtcaaaagaaactatagc 163108
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 cctgcatcttcttcttcttc 390 |||||||||||||||||||| Sbjct: 2535910 cctgcatcttcttcttcttc 2535891
>dbj|AP004108.1| Retropinna retropinna mitochondrial DNA, complete genome Length = 16563 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 ttcttcttcttctggtgatgatga 402 ||||||| |||||||||||||||| Sbjct: 14781 ttcttctgcttctggtgatgatga 14804
>emb|CT573284.1| Platypus DNA sequence from clone CLM1-349H20, complete sequence Length = 151975 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 111098 tctggtgatgatgatgatga 111079
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 tgcatcttcttcttcttctg 392 |||||||||||||||||||| Sbjct: 24616074 tgcatcttcttcttcttctg 24616093 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 gaagaagatgatggtgtggatgaggatg 249 ||||||||||||| || ||||||||||| Sbjct: 13694179 gaagaagatgatgatgaggatgaggatg 13694206
>gb|AC118730.5| Mus musculus chromosome 8, clone RP24-169O12, complete sequence Length = 164561 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 150149 ctgcatcttcttcttcttct 150130
>emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 143895 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 tgcatcttcttcttcttctg 392 |||||||||||||||||||| Sbjct: 132734 tgcatcttcttcttcttctg 132753
>emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G11 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155451 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 gaagaagatgatggtgtggatgaggatg 249 ||||||||||||| || ||||||||||| Sbjct: 55558 gaagaagatgatgatgaggatgaggatg 55585
>emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC clone T2I1 (ESSA project) Length = 116763 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctggtgatgatgatgatga 408 |||||||||||||||||||| Sbjct: 115136 tctggtgatgatgatgatga 115117
>emb|AL117391.1|HS193G15 Human DNA sequence from clone RP1-193G15 on chromosome 4, complete sequence Length = 62493 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaaggagatgagcacaggac 364 |||||||||||||||||||| Sbjct: 37265 gaaggagatgagcacaggac 37246
>emb|CR974466.14| Mouse DNA sequence from clone RP23-331E12 on chromosome 17, complete sequence Length = 210806 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 179021 ctgcatcttcttcttcttct 179002
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 2365650 tggtgatgatgatgatgact 2365669
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold Length = 1751794 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 agaaatagcaaaagaaacta 129 |||||||||||||||||||| Sbjct: 808094 agaaatagcaaaagaaacta 808075
>emb|AL356800.4|CNS05TDI Human chromosome 14 DNA sequence BAC R-97N10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163152 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ggtgatgatgatgatgacta 411 |||||||||||||||||||| Sbjct: 93255 ggtgatgatgatgatgacta 93236
>emb|AL772359.8| Mouse DNA sequence from clone RP23-305E10 on chromosome 11, complete sequence Length = 105736 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tggtgatgatgatgatgact 410 |||||||||||||||||||| Sbjct: 28926 tggtgatgatgatgatgact 28907
>ref|NM_001003835.1| Danio rerio TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor (taf2), mRNA Length = 4376 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtgatgatgatgatga 408 ||||||||||||||| ||| | |||||||||| Sbjct: 3622 tcttcttcttcttcttgtgctcatgatgatga 3591
>emb|AL096838.1|HSJ193G15 Human DNA sequence from clone 193G15 on chromosome 4 Contains the 5' part of the RGS12 gene for regulator of G-protein signalling 12, an RPL7A (60S Ribosomal Protein 7A (SURF3)) pseudogene, ESTs, an STS, GSSs and a putative CpG island, complete sequence Length = 62493 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaaggagatgagcacaggac 364 |||||||||||||||||||| Sbjct: 37265 gaaggagatgagcacaggac 37246
>emb|Z68274.1|HSL185E6A Human DNA sequence from cosmid L129H7, Huntington's Disease Region, chromosome 4p16.3 contains Pseudogene and CpG island Length = 20587 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaaggagatgagcacaggac 364 |||||||||||||||||||| Sbjct: 1177 gaaggagatgagcacaggac 1158
>emb|AL732540.4| Mouse DNA sequence from clone RP23-170L19 on chromosome 4, complete sequence Length = 190289 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 taattaacaagcagcaagaa 99 |||||||||||||||||||| Sbjct: 185918 taattaacaagcagcaagaa 185899
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ctgcatcttcttcttcttct 391 |||||||||||||||||||| Sbjct: 117801 ctgcatcttcttcttcttct 117820
>dbj|AB060808.1| Homo sapiens gene for p16/CDKN2A, complete cds Length = 250000 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 tcttcttcttcttctggtga 396 |||||||||||||||||||| Sbjct: 150947 tcttcttcttcttctggtga 150928 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,937,598 Number of Sequences: 3902068 Number of extensions: 5937598 Number of successful extensions: 892087 Number of sequences better than 10.0: 243 Number of HSP's better than 10.0 without gapping: 246 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 886572 Number of HSP's gapped (non-prelim): 5463 length of query: 422 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 400 effective length of database: 17,147,199,772 effective search space: 6858879908800 effective search space used: 6858879908800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)