ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18j08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome... 76 2e-10
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
3dbj|AK073249.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
4ref|NM_190208.1| Oryza sativa (japonica cultivar-group), predic... 48 0.038
5gb|AC161049.2| Mus musculus BAC clone RP24-94D6 from chromosome ... 48 0.038
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
7dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
8dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
9dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
10dbj|AK121513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.038
11dbj|AK120651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.038
12dbj|AK063795.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.038
13emb|CR682313.2|CNS0FPF9 Tetraodon nigroviridis full-length cDNA 46 0.15
14ref|NM_190594.1| Oryza sativa (japonica cultivar-group), predic... 44 0.59
15gb|AC129775.4| Mus musculus BAC clone RP23-174N20 from chromosom... 44 0.59
16gb|AC140218.2| Mus musculus BAC clone RP23-474A22 from chromosom... 44 0.59
17gb|AY553964.1| Drosophila melanogaster pyramus mRNA, complete cds 44 0.59
18gb|AC114824.5| Mus musculus BAC clone RP23-342J11 from chromosom... 44 0.59
19gb|AC123063.4| Mus musculus BAC clone RP23-219I20 from 5, comple... 44 0.59
20emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 44 0.59
21emb|BX890620.9| Zebrafish DNA sequence from clone DKEY-48C14 in ... 44 0.59
22emb|AL669823.7| Mouse DNA sequence from clone RP23-456O1 on chro... 44 0.59
23emb|BX005225.20| Zebrafish DNA sequence from clone DKEY-34L15 in... 44 0.59
24emb|BX546473.10| Zebrafish DNA sequence from clone DKEYP-51F2 in... 44 0.59
25ref|NM_136854.1| Drosophila melanogaster pyramus CG13194-RA (pyr... 44 0.59
26gb|AC011696.4|AC011696 Drosophila melanogaster, chromosome 2R, r... 44 0.59
27dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.59
28emb|AL954145.13| Zebrafish DNA sequence from clone CH211-284E20 ... 44 0.59
29gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25... 44 0.59
30gb|AC005467.1|AC005467 Drosophila melanogaster, chromosome 2R, r... 44 0.59
31emb|AL929503.4| Zebrafish DNA sequence from clone CH211-158I6, c... 44 0.59
32ref|XM_464984.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.3
33ref|XM_475062.1| Oryza sativa (japonica cultivar-group), predic... 42 2.3
34gb|AC119252.10| Mus musculus chromosome 8, clone RP24-279M13, co... 42 2.3
35gb|AC147162.2| Mus musculus BAC clone RP24-270A10 from chromosom... 42 2.3
36gb|AC124517.4| Mus musculus BAC clone RP23-387K15 from chromosom... 42 2.3
37emb|CR697465.2|CNS0G145 Tetraodon nigroviridis full-length cDNA 42 2.3
38emb|CR692373.1|CNS0FX6P Tetraodon nigroviridis full-length cDNA 42 2.3
39emb|CR654557.2|CNS0F40Z Tetraodon nigroviridis full-length cDNA 42 2.3
40emb|CR637514.2|CNS0EQVK Tetraodon nigroviridis full-length cDNA 42 2.3
41emb|AL591044.11| Human DNA sequence from clone RP11-396L22 on ch... 42 2.3
42gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosom... 42 2.3
43gb|AC159004.5| Mus musculus BAC clone RP23-168H21 from chromosom... 42 2.3
44dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
45dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
46dbj|AK105679.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
47dbj|AK103271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
48gb|AY107077.1| Zea mays PCO071423 mRNA sequence 42 2.3
49gb|AC147250.4| Mus musculus BAC clone RP24-109P17 from 13, compl... 42 2.3
50gb|AC144543.4| Mus musculus BAC clone RP23-394E9 from 12, comple... 42 2.3
51dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 2.3
52gb|AC110821.5| Mus musculus BAC clone RP23-418H19 from chromosom... 42 2.3
53gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
54gb|AC114617.16| Mus musculus chromosome 5, clone RP24-84E3, comp... 40 9.3
55ref|XM_363170.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 9.3
56gb|AC104873.7| Mus musculus chromosome 1, clone RP23-434G18, com... 40 9.3
57gb|AE017335.3| Bacillus anthracis str. 'Ames Ancestor' plasmid p... 40 9.3
58gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, c... 40 9.3
59gb|AC130220.3| Mus musculus BAC clone RP23-140M6 from chromosome... 40 9.3
60gb|AC161205.3| Mus musculus chromosome 7, clone RP23-53C15, comp... 40 9.3
61gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 9.3
62gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosom... 40 9.3
63gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosom... 40 9.3
64gb|AC122525.4| Mus musculus BAC clone RP24-496O17 from chromosom... 40 9.3
65ref|XM_813709.1| Trypanosoma cruzi strain CL Brener developmenta... 40 9.3
66gb|AC122358.2| Mus musculus BAC clone RP23-406B6 from chromosome... 40 9.3
67gb|AC122865.3| Mus musculus BAC clone RP23-143B2 from 8, complet... 40 9.3
68gb|AC104889.10| Mus musculus chromosome 5, clone RP23-201D22, co... 40 9.3
69gb|AF188935.1| Bacillus anthracis plasmid pXO2, complete sequence 40 9.3
70gb|AC154291.2| Mus musculus BAC clone RP23-447B21 from chromosom... 40 9.3
71emb|AL606826.4| Human DNA sequence from clone RP11-154G15 on chr... 40 9.3
72emb|AL356858.19| Human DNA sequence from clone RP11-357K9 on chr... 40 9.3
73emb|AL158193.13| Human DNA sequence from clone RP11-400N12 on ch... 40 9.3
74emb|AL157889.11| Human DNA sequence from clone RP11-154P11 on ch... 40 9.3
75emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 40 9.3
76gb|AC113298.14| Mus musculus chromosome 7, clone RP23-428N8, com... 40 9.3
77emb|BX293556.14| Zebrafish DNA sequence from clone DKEY-21N20 in... 40 9.3
78gb|AE011191.1| Bacillus anthracis str. A2012 plasmid pXO2, compl... 40 9.3
79gb|AC100818.2| Homo sapiens chromosome 8, clone RP11-473J6, comp... 40 9.3
80gb|AC160031.8| Mus musculus 10 BAC RP24-395H7 (Roswell Park Canc... 40 9.3
81gb|AC104519.2| Genomic sequence for Mus musculus, clone RP23-8L6... 40 9.3
82gb|AC012215.11| Homo sapiens chromosome , clone RP11-345N15, com... 40 9.3
83gb|AC083838.6| Homo sapiens chromosome 8, clone RP11-42L4, compl... 40 9.3
84gb|AC158518.2| Mus musculus BAC clone RP24-86K19 from chromosome... 40 9.3
85gb|AC021810.7|AC021810 Homo sapiens chromosome 18, clone RP11-82... 40 9.3
86gb|AC018680.4|AC018680 Homo sapiens BAC clone RP11-384E2 from 4,... 40 9.3
87ref|XM_392100.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 9.3
88gb|AC113303.16| Mus musculus chromosome 5, clone RP23-431E5, com... 40 9.3
89gb|AC079282.1|AC079282 Arabidopsis thaliana chromosome 1 BAC F7F... 40 9.3
90gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 9.3
91emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in... 40 9.3
92gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Can... 40 9.3
93dbj|AP002064.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.3
94emb|CR847970.10| Zebrafish DNA sequence from clone DKEY-220D24 i... 40 9.3
95emb|AL929452.9| Mouse DNA sequence from clone RP23-345L15 on chr... 40 9.3
96gb|AF076980.1|AF076980 Streptomyces albus G heat shock protein C... 40 9.3
97emb|AL732517.20| Mouse DNA sequence from clone RP23-134K17 on ch... 40 9.3
98emb|BX001067.11| Mouse DNA sequence from clone RP23-240P22 on ch... 40 9.3
99gb|AC133181.2| Mus musculus BAC clone RP24-169F11 from 8, comple... 40 9.3
100gb|AC131693.5| Mus musculus BAC clone RP23-391D10 from 14, compl... 40 9.3
101gb|AC127270.4| Mus musculus BAC clone RP23-453E16 from 12, compl... 40 9.3
102dbj|AP007290.1| Lotus japonicus genomic DNA, clone:LjT20H21, TM0... 40 9.3
103gb|AC102620.11| Mus musculus chromosome 5, clone RP23-429E19, co... 40 9.3
104emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on ch... 40 9.3
105emb|AL807778.10| Mouse DNA sequence from clone RP23-198G1 on chr... 40 9.3
106gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosom... 40 9.3
107gb|AC164630.6| Mus musculus 10 BAC RP23-153M4 (Roswell Park Canc... 40 9.3 
>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06,
              complete sequence
          Length = 145323

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                          
Query: 525    tcgtcgaagaggaggtcggcgagggagacctggccctccttcctgtactgcgccacggcc 584
              |||||||||| ||||||  ||| ||||||||| || || |||||||||||| | | ||||
Sbjct: 135181 tcgtcgaagaagaggtcaccgacggagacctgcccttctttcctgtactgcacgatggcc 135240

                                            
Query: 585    ctgtagatgaacgggatgaggccctccatg 614
               |||||||||||||||||| ||| ||||||
Sbjct: 135241 ttgtagatgaacgggatgaagccttccatg 135270
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                            
Query: 525      tcgtcgaagaggaggtcggcgagggagacctggccctccttcctgtactgcgccacggcc 584
                |||||||||| ||||||  ||| ||||||||| || || |||||||||||| | | ||||
Sbjct: 22291916 tcgtcgaagaagaggtcaccgacggagacctgcccttctttcctgtactgcacgatggcc 22291975

                                              
Query: 585      ctgtagatgaacgggatgaggccctccatg 614
                 |||||||||||||||||| ||| ||||||
Sbjct: 22291976 ttgtagatgaacgggatgaagccttccatg 22292005



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 498    gaggtggccgtcggcgaggaggagg 522
              |||| ||||||||||||||||||||
Sbjct: 188059 gaggaggccgtcggcgaggaggagg 188035
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>dbj|AK073249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023G20, full
           insert sequence
          Length = 986

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                       
Query: 525 tcgtcgaagaggaggtcggcgagggagacctggccctccttcctgtactgcgccacggcc 584
           |||||||||| ||||||  ||| ||||||||| || || |||||||||||| | | ||||
Sbjct: 409 tcgtcgaagaagaggtcaccgacggagacctgcccttctttcctgtactgcacgatggcc 350

                                         
Query: 585 ctgtagatgaacgggatgaggccctccatg 614
            |||||||||||||||||| ||| ||||||
Sbjct: 349 ttgtagatgaacgggatgaagccttccatg 320
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>ref|NM_190208.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1209

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 586 tgtagatgaacgggatgaggccctccat 613
           ||||||||||||||||||| ||||||||
Sbjct: 28  tgtagatgaacgggatgagcccctccat 1
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>gb|AC161049.2| Mus musculus BAC clone RP24-94D6 from chromosome 12, complete sequence
          Length = 193424

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 263   atacatgcatgcataacacacaca 286
             ||||||||||||||||||||||||
Sbjct: 74676 atacatgcatgcataacacacaca 74699
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 586      tgtagatgaacgggatgaggccctccat 613
                ||||||||||||||||||| ||||||||
Sbjct: 38638940 tgtagatgaacgggatgagcccctccat 38638967



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                                
Query: 568      tgtactgcgccacggccctgtagatgaacgggatgaggccctccatgg 615
                |||||||||| || ||| || ||||||||||||||| ||| |||||||
Sbjct: 36385456 tgtactgcgctaccgccttgaagatgaacgggatgatgccttccatgg 36385409
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>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0446B05
          Length = 149145

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                              
Query: 568    tgtactgcgccacggccctgtagatgaacgggatgaggccctccatgg 615
              |||||||||| || ||| || ||||||||||||||| ||| |||||||
Sbjct: 135333 tgtactgcgctaccgccttgaagatgaacgggatgatgccttccatgg 135286
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>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1099D03
          Length = 191022

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 586   tgtagatgaacgggatgaggccctccat 613
             ||||||||||||||||||| ||||||||
Sbjct: 96913 tgtagatgaacgggatgagcccctccat 96940
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>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0005H10
          Length = 142885

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 568   tgtactgcgccacggccctgtagatgaacgggatgaggccctccatgg 615
             |||||||||| || ||| || ||||||||||||||| ||| |||||||
Sbjct: 37295 tgtactgcgctaccgccttgaagatgaacgggatgatgccttccatgg 37248
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>dbj|AK121513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P15, full
           insert sequence
          Length = 608

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 568 tgtactgcgccacggccctgtagatgaacgggatgaggccctccatgg 615
           |||||||||| || ||| || ||||||||||||||| ||| |||||||
Sbjct: 120 tgtactgcgctaccgccttgaagatgaacgggatgatgccttccatgg 73
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>dbj|AK120651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157C10, full
           insert sequence
          Length = 614

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 586 tgtagatgaacgggatgaggccctccat 613
           ||||||||||||||||||| ||||||||
Sbjct: 78  tgtagatgaacgggatgagcccctccat 51
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>dbj|AK063795.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-F02, full
           insert sequence
          Length = 732

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 568 tgtactgcgccacggccctgtagatgaacgggatgaggccctccatgg 615
           |||||||||| || ||| || ||||||||||||||| ||| |||||||
Sbjct: 113 tgtactgcgctaccgccttgaagatgaacgggatgatgccttccatgg 66
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>emb|CR682313.2|CNS0FPF9 Tetraodon nigroviridis full-length cDNA
          Length = 1240

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 275 ataacacacacaaactgctagtt 297
           |||||||||||||||||||||||
Sbjct: 31  ataacacacacaaactgctagtt 9
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>ref|NM_190594.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 568 tgtactgcgccacggccctgtagatgaacgggatgaggccctccat 613
           |||||||||| || ||| || ||||||||||||||| ||| |||||
Sbjct: 46  tgtactgcgctaccgccttgaagatgaacgggatgatgccttccat 1
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>gb|AC129775.4| Mus musculus BAC clone RP23-174N20 from chromosome 3, complete sequence
          Length = 225505

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 257    acacaaatacatgcatgcataacacacaca 286
              ||||||||||||||||||| || |||||||
Sbjct: 146920 acacaaatacatgcatgcacaatacacaca 146949
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>gb|AC140218.2| Mus musculus BAC clone RP23-474A22 from chromosome 5, complete sequence
          Length = 184636

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 265    acatgcatgcataacacacaca 286
              ||||||||||||||||||||||
Sbjct: 157461 acatgcatgcataacacacaca 157482
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>gb|AY553964.1| Drosophila melanogaster pyramus mRNA, complete cds
          Length = 3213

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 497  cgaggtggccgtcggcgaggaggagg 522
            |||||||||||||| |||||||||||
Sbjct: 2073 cgaggtggccgtcgacgaggaggagg 2048
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>gb|AC114824.5| Mus musculus BAC clone RP23-342J11 from chromosome 17, complete
             sequence
          Length = 216044

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 265   acatgcatgcataacacacaca 286
             ||||||||||||||||||||||
Sbjct: 98384 acatgcatgcataacacacaca 98363
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>gb|AC123063.4| Mus musculus BAC clone RP23-219I20 from 5, complete sequence
          Length = 204795

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 265    acatgcatgcataacacacaca 286
              ||||||||||||||||||||||
Sbjct: 186047 acatgcatgcataacacacaca 186026
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>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 538    ggtcggcgagggagacctggcc 559
              ||||||||||||||||||||||
Sbjct: 233444 ggtcggcgagggagacctggcc 233465
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>emb|BX890620.9| Zebrafish DNA sequence from clone DKEY-48C14 in linkage group 14,
              complete sequence
          Length = 214857

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 265    acatgcatgcataacacacaca 286
              ||||||||||||||||||||||
Sbjct: 203341 acatgcatgcataacacacaca 203320
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>emb|AL669823.7| Mouse DNA sequence from clone RP23-456O1 on chromosome 11 Contains a
             novel gene and the 5' end of a novel gene, complete
             sequence
          Length = 197012

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Minus

                                               
Query: 257   acacaaatacatgcatgcata-acacacacaaac 289
             ||||| ||||||||||||||| ||||||||||||
Sbjct: 57461 acacacatacatgcatgcatacacacacacaaac 57428
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>emb|BX005225.20| Zebrafish DNA sequence from clone DKEY-34L15 in linkage group 14,
              complete sequence
          Length = 206042

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 265    acatgcatgcataacacacaca 286
              ||||||||||||||||||||||
Sbjct: 155846 acatgcatgcataacacacaca 155867
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>emb|BX546473.10| Zebrafish DNA sequence from clone DKEYP-51F2 in linkage group 3,
             complete sequence
          Length = 211253

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 255   aaacacaaatacatgcatgcat 276
             ||||||||||||||||||||||
Sbjct: 86361 aaacacaaatacatgcatgcat 86382
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>ref|NM_136854.1| Drosophila melanogaster pyramus CG13194-RA (pyr), mRNA
          Length = 2109

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 497  cgaggtggccgtcggcgaggaggagg 522
            |||||||||||||| |||||||||||
Sbjct: 1014 cgaggtggccgtcgacgaggaggagg 989
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>gb|AC011696.4|AC011696 Drosophila melanogaster, chromosome 2R, region 48A-48C, BAC clone
              BACR35F01, complete sequence
          Length = 170869

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 497    cgaggtggccgtcggcgaggaggagg 522
              |||||||||||||| |||||||||||
Sbjct: 141408 cgaggtggccgtcgacgaggaggagg 141383
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 524     gtcgtcgaagaggaggtcggcgaggg 549
               |||||||||||||| |||||||||||
Sbjct: 5515520 gtcgtcgaagaggaagtcggcgaggg 5515495



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 525     tcgtcgaagaggaggtcggcgagg 548
               |||||||||||| |||||||||||
Sbjct: 8443204 tcgtcgaagaggtggtcggcgagg 8443181
to top
>emb|AL954145.13| Zebrafish DNA sequence from clone CH211-284E20 in linkage group 22,
              complete sequence
          Length = 160871

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 257    acacaaatacatgcatgcataacacacaca 286
              ||||||| ||||||| ||||||||||||||
Sbjct: 133832 acacaaaaacatgcacgcataacacacaca 133803
to top
>gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25 of 73 of the complete
              sequence
          Length = 261690

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 497    cgaggtggccgtcggcgaggaggagg 522
              |||||||||||||| |||||||||||
Sbjct: 259900 cgaggtggccgtcgacgaggaggagg 259875
to top
>gb|AC005467.1|AC005467 Drosophila melanogaster, chromosome 2R, region 48C1-48C2, P1 clone
             DS00568, complete sequence
          Length = 62091

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 497   cgaggtggccgtcggcgaggaggagg 522
             |||||||||||||| |||||||||||
Sbjct: 55237 cgaggtggccgtcgacgaggaggagg 55262
to top
>emb|AL929503.4| Zebrafish DNA sequence from clone CH211-158I6, complete sequence
          Length = 174012

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 265  acatgcatgcataacacacaca 286
            ||||||||||||||||||||||
Sbjct: 7209 acatgcatgcataacacacaca 7230
to top
>ref|XM_464984.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 546

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 502 tggccgtcggcgaggaggagg 522
           |||||||||||||||||||||
Sbjct: 98  tggccgtcggcgaggaggagg 118
to top
>ref|XM_475062.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2811

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 498 gaggtggccgtcggcgaggaggagg 522
           |||| ||||||||||||||||||||
Sbjct: 291 gaggaggccgtcggcgaggaggagg 267
to top
>gb|AC119252.10| Mus musculus chromosome 8, clone RP24-279M13, complete sequence
          Length = 176594

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 185   tatgcatcccataattattta 205
             |||||||||||||||||||||
Sbjct: 72831 tatgcatcccataattattta 72851
to top
>gb|AC147162.2| Mus musculus BAC clone RP24-270A10 from chromosome 13, complete sequence
          Length = 170563

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 258    cacaaatacatgcatgcataacacacaca 286
              ||||||| ||||||||||| |||||||||
Sbjct: 129204 cacaaatgcatgcatgcatcacacacaca 129176
to top
>gb|AC124517.4| Mus musculus BAC clone RP23-387K15 from chromosome 13, complete sequence
          Length = 198825

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 258    cacaaatacatgcatgcataacacacaca 286
              ||||||| ||||||||||| |||||||||
Sbjct: 127701 cacaaatgcatgcatgcatcacacacaca 127729
to top
>emb|CR697465.2|CNS0G145 Tetraodon nigroviridis full-length cDNA
          Length = 1178

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 275 ataacacacacaaactgctag 295
           |||||||||||||||||||||
Sbjct: 37  ataacacacacaaactgctag 17
to top
>emb|CR692373.1|CNS0FX6P Tetraodon nigroviridis full-length cDNA
          Length = 1180

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 275 ataacacacacaaactgctag 295
           |||||||||||||||||||||
Sbjct: 28  ataacacacacaaactgctag 8
to top
>emb|CR654557.2|CNS0F40Z Tetraodon nigroviridis full-length cDNA
          Length = 1263

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 275 ataacacacacaaactgctag 295
           |||||||||||||||||||||
Sbjct: 45  ataacacacacaaactgctag 25
to top
>emb|CR637514.2|CNS0EQVK Tetraodon nigroviridis full-length cDNA
          Length = 1239

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 275 ataacacacacaaactgctag 295
           |||||||||||||||||||||
Sbjct: 33  ataacacacacaaactgctag 13
to top
>emb|AL591044.11| Human DNA sequence from clone RP11-396L22 on chromosome 6 Contains two
             CpG islands, complete sequence
          Length = 133561

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   acacaaatacatgcatgcata 277
             |||||||||||||||||||||
Sbjct: 68696 acacaaatacatgcatgcata 68716
to top
>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete
            sequence
          Length = 206310

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  tatgcatcccataattattta 205
            |||||||||||||||||||||
Sbjct: 1322 tatgcatcccataattattta 1302
to top
>gb|AC159004.5| Mus musculus BAC clone RP23-168H21 from chromosome 15, complete sequence
          Length = 217298

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 257    acacaaatacatgcatgcata 277
              |||||||||||||||||||||
Sbjct: 167814 acacaaatacatgcatgcata 167834
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 502      tggccgtcggcgaggaggagg 522
                |||||||||||||||||||||
Sbjct: 10765757 tggccgtcggcgaggaggagg 10765777
to top
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1115_D03
          Length = 169378

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 502    tggccgtcggcgaggaggagg 522
              |||||||||||||||||||||
Sbjct: 105238 tggccgtcggcgaggaggagg 105258
to top
>dbj|AK105679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-B03, full
           insert sequence
          Length = 3336

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 498 gaggtggccgtcggcgaggaggagg 522
           |||| ||||||||||||||||||||
Sbjct: 404 gaggaggccgtcggcgaggaggagg 380
to top
>dbj|AK103271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124H21, full
           insert sequence
          Length = 3259

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 498 gaggtggccgtcggcgaggaggagg 522
           |||| ||||||||||||||||||||
Sbjct: 344 gaggaggccgtcggcgaggaggagg 320
to top
>gb|AY107077.1| Zea mays PCO071423 mRNA sequence
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 513 gaggaggaggggtcgtcgaagagga 537
           |||||||||||||||| ||||||||
Sbjct: 750 gaggaggaggggtcgttgaagagga 726
to top
>gb|AC147250.4| Mus musculus BAC clone RP24-109P17 from 13, complete sequence
          Length = 196150

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 257   acacaaatacatgcatgcata 277
             |||||||||||||||||||||
Sbjct: 82407 acacaaatacatgcatgcata 82387
to top
>gb|AC144543.4| Mus musculus BAC clone RP23-394E9 from 12, complete sequence
          Length = 219234

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                               
Query: 257    acacaaatacatgcatgcataacacacacaaac 289
              |||||||||||| |||||| |||||||||||||
Sbjct: 120287 acacaaatacatacatgca-aacacacacaaac 120256
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 408     ggtgcgcgggagaccgccgcg 428
               |||||||||||||||||||||
Sbjct: 2661670 ggtgcgcgggagaccgccgcg 2661650
to top
>gb|AC110821.5| Mus musculus BAC clone RP23-418H19 from chromosome 15, complete
             sequence
          Length = 213726

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   acacaaatacatgcatgcata 277
             |||||||||||||||||||||
Sbjct: 69855 acacaaatacatgcatgcata 69875
to top
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
             complete sequence
          Length = 160603

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 498   gaggtggccgtcggcgaggaggagg 522
             |||| ||||||||||||||||||||
Sbjct: 70243 gaggaggccgtcggcgaggaggagg 70219
to top
>gb|AC114617.16| Mus musculus chromosome 5, clone RP24-84E3, complete sequence
          Length = 200977

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 263  atacatgcatgcataacacacaca 286
            |||||| |||||||||||||||||
Sbjct: 4976 atacatacatgcataacacacaca 4999
to top
>ref|XM_363170.1| Magnaporthe grisea 70-15 predicted protein (MG08754.4) partial cds
          Length = 741

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 171 ggaggtcctgcgcttatgcatccc 194
           ||||||| ||||||||||||||||
Sbjct: 304 ggaggtcatgcgcttatgcatccc 327
to top
>gb|AC104873.7| Mus musculus chromosome 1, clone RP23-434G18, complete sequence
          Length = 205266

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 263    atacatgcatgcata-acacacacaaac 289
              ||||||||||||||| ||||||||||||
Sbjct: 156833 atacatgcatgcatacacacacacaaac 156860
to top
>gb|AE017335.3| Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, complete sequence
          Length = 94830

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   agcttaactgaaacacaaat 264
             ||||||||||||||||||||
Sbjct: 46786 agcttaactgaaacacaaat 46805
to top
>gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, complete sequence
          Length = 195506

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    gaaacacaaatacatgcatg 273
              ||||||||||||||||||||
Sbjct: 184359 gaaacacaaatacatgcatg 184340
to top
>gb|AC130220.3| Mus musculus BAC clone RP23-140M6 from chromosome 6, complete sequence
          Length = 200785

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 263   atacatgcatgcataacacacaca 286
             |||||||||||||||| |||||||
Sbjct: 67468 atacatgcatgcataatacacaca 67445
to top
>gb|AC161205.3| Mus musculus chromosome 7, clone RP23-53C15, complete sequence
          Length = 244671

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 241   tacaagcttaactgaaacacaaat 264
             ||||||||| ||||||||||||||
Sbjct: 49659 tacaagcttcactgaaacacaaat 49682
to top
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 57      ccttctgtcttctgtcttgt 76
               ||||||||||||||||||||
Sbjct: 5868213 ccttctgtcttctgtcttgt 5868194
to top
>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete sequence
          Length = 216041

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 263    atacatgcatgcataacacacaca 286
              |||||||||| |||||||||||||
Sbjct: 104445 atacatgcatacataacacacaca 104468
to top
>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete sequence
          Length = 178757

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 263    atacatgcatgcataacacacaca 286
              ||||||||||||||| ||||||||
Sbjct: 170954 atacatgcatgcatagcacacaca 170977
to top
>gb|AC122525.4| Mus musculus BAC clone RP24-496O17 from chromosome 9, complete sequence
          Length = 196461

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 263   atacatgcatgcataacacacaca 286
             ||||||||||||| ||||||||||
Sbjct: 34635 atacatgcatgcaaaacacacaca 34658
to top
>ref|XM_813709.1| Trypanosoma cruzi strain CL Brener developmentally regulated
            phosphoprotein (Tc00.1047053511421.110) partial mRNA
          Length = 1272

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 254  gaaacacaaatacatgcatg 273
            ||||||||||||||||||||
Sbjct: 1016 gaaacacaaatacatgcatg 997
to top
>gb|AC122358.2| Mus musculus BAC clone RP23-406B6 from chromosome 17, complete sequence
          Length = 184952

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   cacaaatacatgcatgcata 277
             ||||||||||||||||||||
Sbjct: 56889 cacaaatacatgcatgcata 56908
to top
>gb|AC122865.3| Mus musculus BAC clone RP23-143B2 from 8, complete sequence
          Length = 201139

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    cacaaatacatgcatgcata 277
              ||||||||||||||||||||
Sbjct: 169969 cacaaatacatgcatgcata 169950
to top
>gb|AC104889.10| Mus musculus chromosome 5, clone RP23-201D22, complete sequence
          Length = 196086

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  cacaaatacatgcatgcata 277
            ||||||||||||||||||||
Sbjct: 8907 cacaaatacatgcatgcata 8888
to top
>gb|AF188935.1| Bacillus anthracis plasmid pXO2, complete sequence
          Length = 96231

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   agcttaactgaaacacaaat 264
             ||||||||||||||||||||
Sbjct: 47284 agcttaactgaaacacaaat 47303
to top
>gb|AC154291.2| Mus musculus BAC clone RP23-447B21 from chromosome 17, complete
             sequence
          Length = 178703

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   acacaaatacatgcatgcat 276
             ||||||||||||||||||||
Sbjct: 66370 acacaaatacatgcatgcat 66351
to top
>emb|AL606826.4| Human DNA sequence from clone RP11-154G15 on chromosome 13, complete
             sequence
          Length = 98677

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   taactgaaacacaaatacat 268
             ||||||||||||||||||||
Sbjct: 44508 taactgaaacacaaatacat 44527
to top
>emb|AL356858.19| Human DNA sequence from clone RP11-357K9 on chromosome Xp11.4-21.2
             Contains the PRRG1 gene for proline-rich Gla
             (G-carboxyglutamic acid) polypetide 1, a ferritin heavy
             polypeptide-like 17 (FTHL17) pseudogene and a CpG island,
             complete sequence
          Length = 128968

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   acaaatacatgcatgcataa 278
             ||||||||||||||||||||
Sbjct: 92315 acaaatacatgcatgcataa 92334
to top
>emb|AL158193.13| Human DNA sequence from clone RP11-400N12 on chromosome 13 Contains the
             3' end of the UBL3 gene for ubiquitin-like 3 and a CpG
             island, complete sequence
          Length = 172896

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   ttatttacagttgatactca 218
             ||||||||||||||||||||
Sbjct: 71704 ttatttacagttgatactca 71723
to top
>emb|AL157889.11| Human DNA sequence from clone RP11-154P11 on chromosome 10 Contains the
             5' end of a novel gene (FLJ38380), complete sequence
          Length = 90500

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 265   acatgcatgcataacacacacaaa 288
             |||||||| |||||||||||||||
Sbjct: 50843 acatgcatacataacacacacaaa 50820
to top
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 524    gtcgtcgaagaggaggtcggcgag 547
              |||||||||||||| |||||||||
Sbjct: 123211 gtcgtcgaagaggaagtcggcgag 123234
to top
>gb|AC113298.14| Mus musculus chromosome 7, clone RP23-428N8, complete sequence
          Length = 181555

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 241   tacaagcttaactgaaacacaaat 264
             ||||||||| ||||||||||||||
Sbjct: 53859 tacaagcttcactgaaacacaaat 53836
to top
>emb|BX293556.14| Zebrafish DNA sequence from clone DKEY-21N20 in linkage group 11,
              complete sequence
          Length = 212880

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    atgcatgcataacacacaca 286
              ||||||||||||||||||||
Sbjct: 210624 atgcatgcataacacacaca 210643



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    atgcatgcataacacacaca 286
              ||||||||||||||||||||
Sbjct: 210336 atgcatgcataacacacaca 210355
to top
>gb|AE011191.1| Bacillus anthracis str. A2012 plasmid pXO2, complete sequence
          Length = 94829

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   agcttaactgaaacacaaat 264
             ||||||||||||||||||||
Sbjct: 46786 agcttaactgaaacacaaat 46805
to top
>gb|AC100818.2| Homo sapiens chromosome 8, clone RP11-473J6, complete sequence
          Length = 178856

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 259    acaaatacatgcatgcataacaca 282
              |||||| |||||||||||||||||
Sbjct: 174366 acaaatgcatgcatgcataacaca 174389
to top
>gb|AC160031.8| Mus musculus 10 BAC RP24-395H7 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 191028

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 266    catgcatgcataacacacacaaac 289
              ||||||||||||| ||||||||||
Sbjct: 154586 catgcatgcataatacacacaaac 154563
to top
>gb|AC104519.2| Genomic sequence for Mus musculus, clone RP23-8L6, complete sequence
          Length = 197070

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   cacaaatacatgcatgcata 277
             ||||||||||||||||||||
Sbjct: 38854 cacaaatacatgcatgcata 38835
to top
>gb|AC012215.11| Homo sapiens chromosome , clone RP11-345N15, complete sequence
          Length = 210723

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 259    acaaatacatgcatgcataacaca 282
              |||||| |||||||||||||||||
Sbjct: 173087 acaaatgcatgcatgcataacaca 173064
to top
>gb|AC083838.6| Homo sapiens chromosome 8, clone RP11-42L4, complete sequence
          Length = 156623

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 259    acaaatacatgcatgcataacaca 282
              |||||| |||||||||||||||||
Sbjct: 102441 acaaatgcatgcatgcataacaca 102418
to top
>gb|AC158518.2| Mus musculus BAC clone RP24-86K19 from chromosome 9, complete sequence
          Length = 203656

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 266   catgcatgcataacacacacaaac 289
             ||||||||||| ||||||||||||
Sbjct: 84181 catgcatgcattacacacacaaac 84204
to top
>gb|AC021810.7|AC021810 Homo sapiens chromosome 18, clone RP11-82K14, complete sequence
          Length = 192100

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   atgcatgcataacacacaca 286
             ||||||||||||||||||||
Sbjct: 98892 atgcatgcataacacacaca 98911
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>gb|AC018680.4|AC018680 Homo sapiens BAC clone RP11-384E2 from 4, complete sequence
          Length = 181850

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 257   acacaaatacatgcatgcataaca 280
             ||||| ||||||||||||||||||
Sbjct: 85329 acacacatacatgcatgcataaca 85306
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>ref|XM_392100.2| PREDICTED: Apis mellifera similar to ENSANGP00000019572 (LOC408555),
            mRNA
          Length = 2944

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 515  ggaggaggggtcgtcgaagaggag 538
            |||||||| |||||||||||||||
Sbjct: 1995 ggaggaggcgtcgtcgaagaggag 2018
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>gb|AC113303.16| Mus musculus chromosome 5, clone RP23-431E5, complete sequence
          Length = 221109

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 263  atacatgcatgcataacacacaca 286
            |||||| |||||||||||||||||
Sbjct: 8849 atacatacatgcataacacacaca 8826
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>gb|AC079282.1|AC079282 Arabidopsis thaliana chromosome 1 BAC F7F7 genomic sequence, complete
             sequence
          Length = 23712

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   aactgaaacacaaatacatg 269
             ||||||||||||||||||||
Sbjct: 17439 aactgaaacacaaatacatg 17420
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 414     cgggagaccgccgcgccgccgtaccgta 441
               |||| ||||||||||||||||| |||||
Sbjct: 4581610 cgggcgaccgccgcgccgccgtgccgta 4581583
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>emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in linkage group 7,
             complete sequence
          Length = 209666

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   atgcataacacacacaaact 290
             ||||||||||||||||||||
Sbjct: 47713 atgcataacacacacaaact 47694
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>gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 200061

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   taattatttacagttgatac 215
             ||||||||||||||||||||
Sbjct: 36787 taattatttacagttgatac 36768
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>dbj|AP002064.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T26G12
          Length = 84785

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   aactgaaacacaaatacatg 269
             ||||||||||||||||||||
Sbjct: 20858 aactgaaacacaaatacatg 20839
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>emb|CR847970.10| Zebrafish DNA sequence from clone DKEY-220D24 in linkage group 11,
              complete sequence
          Length = 161576

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    atgcatgcataacacacaca 286
              ||||||||||||||||||||
Sbjct: 154554 atgcatgcataacacacaca 154573



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    atgcatgcataacacacaca 286
              ||||||||||||||||||||
Sbjct: 154250 atgcatgcataacacacaca 154269



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    atgcatgcataacacacaca 286
              ||||||||||||||||||||
Sbjct: 154180 atgcatgcataacacacaca 154199



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    atgcatgcataacacacaca 286
              ||||||||||||||||||||
Sbjct: 154116 atgcatgcataacacacaca 154135
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>emb|AL929452.9| Mouse DNA sequence from clone RP23-345L15 on chromosome X, complete
              sequence
          Length = 221920

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    acatgcatgcataacacaca 284
              ||||||||||||||||||||
Sbjct: 140689 acatgcatgcataacacaca 140708
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>gb|AF076980.1|AF076980 Streptomyces albus G heat shock protein ClpB (clpB) gene, complete
            cds
          Length = 3291

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 524  gtcgtcgaagaggaggtcggcgag 547
            |||||||||||||| |||||||||
Sbjct: 2331 gtcgtcgaagaggaagtcggcgag 2308
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>emb|AL732517.20| Mouse DNA sequence from clone RP23-134K17 on chromosome 4, complete
             sequence
          Length = 139314

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 263   atacatgcatgcataacacacaca 286
             ||||||||||||||| ||||||||
Sbjct: 85338 atacatgcatgcataccacacaca 85361
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>emb|BX001067.11| Mouse DNA sequence from clone RP23-240P22 on chromosome 4, complete
             sequence
          Length = 34594

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    cttctgtcttctgtcttgtg 77
             ||||||||||||||||||||
Sbjct: 25806 cttctgtcttctgtcttgtg 25825
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>gb|AC133181.2| Mus musculus BAC clone RP24-169F11 from 8, complete sequence
          Length = 140384

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   acacaaatacatgcatgcat 276
             ||||||||||||||||||||
Sbjct: 39527 acacaaatacatgcatgcat 39546
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>gb|AC131693.5| Mus musculus BAC clone RP23-391D10 from 14, complete sequence
          Length = 220202

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 266   catgcatgcataacacacacaaac 289
             |||||||||| |||||||||||||
Sbjct: 25141 catgcatgcacaacacacacaaac 25118
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>gb|AC127270.4| Mus musculus BAC clone RP23-453E16 from 12, complete sequence
          Length = 181004

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 263   atacatgcatgcataacacacaca 286
             ||||||||| ||||||||||||||
Sbjct: 40688 atacatgcaggcataacacacaca 40711
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>dbj|AP007290.1| Lotus japonicus genomic DNA, clone:LjT20H21, TM0319, complete sequence
          Length = 64598

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   aagcttaactgaaacacaaa 263
             ||||||||||||||||||||
Sbjct: 51756 aagcttaactgaaacacaaa 51737
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>gb|AC102620.11| Mus musculus chromosome 5, clone RP23-429E19, complete sequence
          Length = 208435

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    cacaaatacatgcatgcata 277
              ||||||||||||||||||||
Sbjct: 171560 cacaaatacatgcatgcata 171541
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>emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on chromosome X, complete
              sequence
          Length = 196568

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    atgcatgcataacacacaca 286
              ||||||||||||||||||||
Sbjct: 183619 atgcatgcataacacacaca 183638
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>emb|AL807778.10| Mouse DNA sequence from clone RP23-198G1 on chromosome 2, complete
              sequence
          Length = 203518

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 263    atacatgcatgcataacacacaca 286
              |||||||||||||| |||||||||
Sbjct: 134026 atacatgcatgcatcacacacaca 134003
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>gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosome 16, complete sequence
          Length = 186404

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 263    atacatgcatgcataacacacaca 286
              ||||||||||||||| ||||||||
Sbjct: 156889 atacatgcatgcatagcacacaca 156912
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>gb|AC164630.6| Mus musculus 10 BAC RP23-153M4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 187031

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 266    catgcatgcataacacacacaaac 289
              ||||||||||||| ||||||||||
Sbjct: 179854 catgcatgcataatacacacaaac 179877


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,317,645
Number of Sequences: 3902068
Number of extensions: 5317645
Number of successful extensions: 114168
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 113245
Number of HSP's gapped (non-prelim): 926
length of query: 677
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 654
effective length of database: 17,143,297,704
effective search space: 11211716698416
effective search space used: 11211716698416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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