Clone Name | rbasd18j06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK059590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D01, full insert sequence Length = 506 Score = 202 bits (102), Expect = 1e-48 Identities = 213/250 (85%) Strand = Plus / Minus Query: 202 agacatcatacttcttcggctggtgccattgggctaggcttatggacaggtagccgagca 261 |||||||||||||||| |||||||||||||| |||| || | |||| ||| || |||| Sbjct: 251 agacatcatacttcttgggctggtgccattgcgctacagttctagacaagtaaccaagca 192 Query: 262 acgactttccagcagggtatgtcctcttgccatagagatgcttcccaccgagatcggtgt 321 | || || | ||||||||||||||||||||| |||||||||||||| ||||| || | Sbjct: 191 atgatgttttggaagggtatgtcctcttgccatacagatgcttcccaccaagatcagtat 132 Query: 322 acttcgaactgttctccctttcaatcttgcttattttcccatctctcaggtagtacctga 381 ||||| | ||||||| || || ||||||||||||||||||||| |||||| |||||||| Sbjct: 131 acttcaatttgttctctctctcgatcttgcttattttcccatctttcaggtggtacctga 72 Query: 382 taccagaccaattgattgattgggagaaatgggaccggatggcagatatcgggtagagga 441 ||||||||||||||||||||||||| ||||| |||| || |||||||| |||||||| | Sbjct: 71 taccagaccaattgattgattgggaaaaatgagacctgaatgcagatatagggtagagaa 12 Query: 442 aattgtctac 451 | |||||||| Sbjct: 11 agttgtctac 2 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1 gttacatatctgtaatgttacaagaacta 29 ||||||||||| || |||||||||||||| Sbjct: 445 gttacatatctatactgttacaagaacta 417
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 133 bits (67), Expect = 9e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 347 cttgcttattttcccatctctcaggtagtacctgataccagaccaattgattgattggga 406 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 39431760 cttgcttattttcccatctttcaggtggtacctgataccagaccaattgattgattggga 39431819 Query: 407 gaaatgggaccggatggcagatatcgggtagaggaaattgtctactaacac 457 ||||| |||| || |||||||| |||||||| || |||||||| ||||| Sbjct: 39431820 aaaatgagacctgaatgcagatatagggtagagaaagttgtctaccaacac 39431870 Score = 117 bits (59), Expect = 5e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 474 ccccagttatatgaacgaagggagtcttgtggtccttctggagataacatgttgcagagt 533 ||||||||||| |||| ||| ||| ||| ||| ||||| ||||| ||||||||||| ||| Sbjct: 39431990 ccccagttataagaaccaagagagacttttggcccttcgggagacaacatgttgcacagt 39432049 Query: 534 tggatctcaactctcgtcaaattccacatcgaaacgagttcagtgagagtgcatattaac 593 || || || || | |||||||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 39432050 tgaatttccacctttgtcaaattccacattgaaacaagttctgtgagagtgcatattaac 39432109 Query: 594 aagaagctcactagtttcagacc 616 ||| ||| |||||||||||||| Sbjct: 39432110 aagcagcaaactagtttcagacc 39432132 Score = 81.8 bits (41), Expect = 3e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 202 agacatcatacttcttcggctggtgccattgggctaggcttatggacaggtagccgagca 261 |||||||||||||||| |||||||||||||| |||| || | |||| ||| || |||| Sbjct: 39431482 agacatcatacttcttgggctggtgccattgcgctacagttctagacaagtaaccaagca 39431541 Query: 262 acgactttccagcagggtatgtcctcttgccatagagatgcttcccaccgagatcggtgt 321 | || || | ||||||||||||||||||||| |||||||||||||| ||||| || | Sbjct: 39431542 atgatgttttggaagggtatgtcctcttgccatacagatgcttcccaccaagatcagtat 39431601 Query: 322 acttc 326 ||||| Sbjct: 39431602 acttc 39431606 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1 gttacatatctgtaatgttacaagaacta 29 ||||||||||| || |||||||||||||| Sbjct: 39431288 gttacatatctatactgttacaagaacta 39431316 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ccaaaagaaaagaagaacaaaaca 144 ||||||||||||||||| |||||| Sbjct: 28225785 ccaaaagaaaagaagaataaaaca 28225762
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 133 bits (67), Expect = 9e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 347 cttgcttattttcccatctctcaggtagtacctgataccagaccaattgattgattggga 406 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 6774 cttgcttattttcccatctttcaggtggtacctgataccagaccaattgattgattggga 6833 Query: 407 gaaatgggaccggatggcagatatcgggtagaggaaattgtctactaacac 457 ||||| |||| || |||||||| |||||||| || |||||||| ||||| Sbjct: 6834 aaaatgagacctgaatgcagatatagggtagagaaagttgtctaccaacac 6884 Score = 117 bits (59), Expect = 5e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 474 ccccagttatatgaacgaagggagtcttgtggtccttctggagataacatgttgcagagt 533 ||||||||||| |||| ||| ||| ||| ||| ||||| ||||| ||||||||||| ||| Sbjct: 7004 ccccagttataagaaccaagagagacttttggcccttcgggagacaacatgttgcacagt 7063 Query: 534 tggatctcaactctcgtcaaattccacatcgaaacgagttcagtgagagtgcatattaac 593 || || || || | |||||||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 7064 tgaatttccacctttgtcaaattccacattgaaacaagttctgtgagagtgcatattaac 7123 Query: 594 aagaagctcactagtttcagacc 616 ||| ||| |||||||||||||| Sbjct: 7124 aagcagcaaactagtttcagacc 7146 Score = 81.8 bits (41), Expect = 3e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 202 agacatcatacttcttcggctggtgccattgggctaggcttatggacaggtagccgagca 261 |||||||||||||||| |||||||||||||| |||| || | |||| ||| || |||| Sbjct: 6496 agacatcatacttcttgggctggtgccattgcgctacagttctagacaagtaaccaagca 6555 Query: 262 acgactttccagcagggtatgtcctcttgccatagagatgcttcccaccgagatcggtgt 321 | || || | ||||||||||||||||||||| |||||||||||||| ||||| || | Sbjct: 6556 atgatgttttggaagggtatgtcctcttgccatacagatgcttcccaccaagatcagtat 6615 Query: 322 acttc 326 ||||| Sbjct: 6616 acttc 6620 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1 gttacatatctgtaatgttacaagaacta 29 ||||||||||| || |||||||||||||| Sbjct: 6302 gttacatatctatactgttacaagaacta 6330
>gb|AF367245.1|AF367245 Gossypium arboreum ceramide glucosyltransferase mRNA, complete cds Length = 2101 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 381 ataccagaccaattgattgattgggagaaatgggaccggatggcagatatcgggta 436 ||||| ||||||||||||||||| |||||||| || |||| |||||| || ||||| Sbjct: 1560 atacccgaccaattgattgattgagagaaatgagatcggaaggcagagatagggta 1505
>gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, complete sequence Length = 247769 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 114 caataaaccaaaagaaaagaagaacaaaacaca 146 |||||||||||||||| |||||||||| ||||| Sbjct: 4746 caataaaccaaaagaagagaagaacaacacaca 4714
>gb|AC157557.5| Mus musculus chromosome 7, clone RP24-369M22, complete sequence Length = 202543 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 114 caataaaccaaaagaaaagaagaacaaaacaca 146 |||||||||||||||| |||||||||| ||||| Sbjct: 198954 caataaaccaaaagaagagaagaacaacacaca 198922
>gb|AC008453.6| Homo sapiens chromosome 5 clone CTC-345K18, complete sequence Length = 145064 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 123 aaaagaaaagaagaacaaaacaca 146 |||||||||||||||||||||||| Sbjct: 108078 aaaagaaaagaagaacaaaacaca 108101
>gb|AC011383.6| Homo sapiens chromosome 5 clone CTB-140J7, complete sequence Length = 93407 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 123 aaaagaaaagaagaacaaaacaca 146 |||||||||||||||||||||||| Sbjct: 84626 aaaagaaaagaagaacaaaacaca 84603
>gb|AC114403.15| Mus musculus chromosome 1, clone RP23-197H1, complete sequence Length = 221305 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 118 aaaccaaaagaaaagaagaacaaaaca 144 ||||||||||||||||| ||||||||| Sbjct: 91089 aaaccaaaagaaaagaaaaacaaaaca 91115
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 116 ataaaccaaaagaaaagaagaacaaaa 142 ||||||||||||||||||| ||||||| Sbjct: 19523886 ataaaccaaaagaaaagaaaaacaaaa 19523860
>dbj|AB125313.1| Nannochloris bacillaris NbrbcS1-2, GAMM1, Mut2 genes for ribulose-1,5-bisphosphate carboxyase/oxygenase small subunit, GAMM1 protein-like protein, DNA mismatch repair protein Mut2-like protein and genes for trypsin, peptidyl-prolyl cis-trans isomerase, complete cds Length = 12642 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 aataaaccaaaagaaaagaagaa 137 ||||||||||||||||||||||| Sbjct: 5487 aataaaccaaaagaaaagaagaa 5465
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 116 ataaaccaaaagaaaagaagaacaaaa 142 ||||||||||||||||||| ||||||| Sbjct: 19450099 ataaaccaaaagaaaagaaaaacaaaa 19450073
>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144596 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 116 ataaaccaaaagaaaagaagaacaaaa 142 ||||||||||||||||||| ||||||| Sbjct: 56067 ataaaccaaaagaaaagaaaaacaaaa 56041
>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence Length = 253733 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 336 tccctttcaatcttgcttattttccc 361 |||||||| ||||||||||||||||| Sbjct: 95206 tccctttctatcttgcttattttccc 95181
>dbj|BS000163.1| Pan troglodytes chromosome 22 clone:RP43-010B02, map 22, complete sequences Length = 182740 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 aagaaaagaagaacaaaacaca 146 |||||||||||||||||||||| Sbjct: 22763 aagaaaagaagaacaaaacaca 22784
>dbj|BS000158.1| Pan troglodytes chromosome 22 clone:PTB-042G18, map 22, complete sequences Length = 190319 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 aagaaaagaagaacaaaacaca 146 |||||||||||||||||||||| Sbjct: 115432 aagaaaagaagaacaaaacaca 115453
>emb|BX248499.12| Zebrafish DNA sequence from clone CH211-284A13 in linkage group 19, complete sequence Length = 148683 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 115 aataaaccaaaagaaaagaaga 136 |||||||||||||||||||||| Sbjct: 47719 aataaaccaaaagaaaagaaga 47698
>emb|AL954234.1|PTB080A15 Pan troglodytes chromosome 22 BAC PTB-080A15, complete sequence Length = 175584 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 aagaaaagaagaacaaaacaca 146 |||||||||||||||||||||| Sbjct: 104797 aagaaaagaagaacaaaacaca 104818
>gb|AC109186.7| Mus musculus chromosome 5, clone RP24-351E22, complete sequence Length = 174202 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 accaaaagaaaagaagaacaaaaca 144 ||||||||||||||| ||||||||| Sbjct: 132432 accaaaagaaaagaaaaacaaaaca 132456
>ref|XM_713786.1| Candida albicans SC5314 hypothetical protein (CaO19_13440), mRNA Length = 312 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 caaaagaaaagaagaacaaaa 142 ||||||||||||||||||||| Sbjct: 166 caaaagaaaagaagaacaaaa 146
>gb|AC127416.7| Mus musculus BAC clone RP23-457J22 from chromosome 8, complete sequence Length = 206997 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 aaaccaaaagaaaagaagaacaaaa 142 |||||||||||||||||||| |||| Sbjct: 34963 aaaccaaaagaaaagaagaagaaaa 34987
>gb|AC144712.2| Danio rerio clone CH211-4G3, complete sequence Length = 197292 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 aaagaaaagaagaacaaaaca 144 ||||||||||||||||||||| Sbjct: 55930 aaagaaaagaagaacaaaaca 55910
>gb|AC110219.11| Mus musculus chromosome 1, clone RP24-541P18, complete sequence Length = 193614 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 118 aaaccaaaagaaaagaagaacaaaa 142 |||||||||||||||||||| |||| Sbjct: 69342 aaaccaaaagaaaagaagaagaaaa 69318
>gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete sequence Length = 213811 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 120 accaaaagaaaagaagaacaaaaca 144 ||||||||||||||| ||||||||| Sbjct: 135607 accaaaagaaaagaaaaacaaaaca 135583
>gb|AC160547.6| Mus musculus chromosome 8, clone RP23-240F23, complete sequence Length = 170722 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 aaaccaaaagaaaagaagaacaaaa 142 |||||||||||||||||||| |||| Sbjct: 5371 aaaccaaaagaaaagaagaagaaaa 5395
>gb|AC147964.10| Medicago truncatula clone mth2-5i18, complete sequence Length = 134939 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 aagaaaagaagaacaaaacac 145 ||||||||||||||||||||| Sbjct: 134719 aagaaaagaagaacaaaacac 134739
>emb|AL450998.19| Human DNA sequence from clone RP11-169K16 on chromosome 1 Contains the 3' end of the gene for a novel RUN and PH domain-containing protein (KIAA0842), the 5' end of a novel gene, two genes for a novel proteins, a novel gene, the gene for filamin-binding LIM protein-1 (FBLP-1), a ribosomal protein L12 (RPL12) pseudogene, a ubiquinol-cytochrome c reductase hinge protein (UQCRH) pseudogene, a ribosomal protein S16 (RPS16) pseudogene, a novel gene (FLJ42024), the 5' end of the gene for SMART/HDAC1 associated repressor protein (SHARP) and three CpG islands, complete sequence Length = 163108 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 tttcccatctctcaggtagtacctg 380 |||||||||||||||||||| |||| Sbjct: 39265 tttcccatctctcaggtagttcctg 39241
>emb|AL023806.1|HS466P17 Human DNA sequence from clone RP3-466P17 on chromosome 6q24 Contains the 5' end of the EPM2A gene for progressive myoclonus type 2 epilepsy (Lafora disease) protein (laforin) and a CpG island, complete sequence Length = 149963 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 628 cagctgcttcctttacaattg 648 ||||||||||||||||||||| Sbjct: 124670 cagctgcttcctttacaattg 124650
>gb|AC166325.1| Mus musculus BAC clone RP24-421O23 from chromosome 13, complete sequence Length = 192167 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 123 aaaagaaaagaagaacaaaacacag 147 |||||||||||||| |||||||||| Sbjct: 177937 aaaagaaaagaagagcaaaacacag 177913
>gb|AC079841.10| Homo sapiens 3 BAC RP11-10G15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167865 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 caaaacacaggtgtacaacac 158 ||||||||||||||||||||| Sbjct: 134881 caaaacacaggtgtacaacac 134901
>dbj|AK220275.1| Mus musculus mRNA for mKIAA4008 protein Length = 6251 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 120 accaaaagaaaagaagaacaaaaca 144 ||||||||||||||| ||||||||| Sbjct: 3744 accaaaagaaaagaaaaacaaaaca 3720
>gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete sequence Length = 107160 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 caaaagaaaagaagaacaaaa 142 ||||||||||||||||||||| Sbjct: 91390 caaaagaaaagaagaacaaaa 91410
>gb|AC009634.9| Homo sapiens chromosome 8, clone RP11-413C18, complete sequence Length = 205638 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 114 caataaaccaaaagaaaagaagaacaaaa 142 ||||||| ||||||||||||| ||||||| Sbjct: 81971 caataaaacaaaagaaaagaacaacaaaa 81999
>gb|AC107023.4| Homo sapiens 12 BAC RP11-115F18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150353 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tccctttcaatcttgcttatt 356 ||||||||||||||||||||| Sbjct: 80559 tccctttcaatcttgcttatt 80579
>gb|AC114956.2| Homo sapiens chromosome 5 clone RP11-159F24, complete sequence Length = 104726 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 caaaacacaggtgtacaacac 158 ||||||||||||||||||||| Sbjct: 70706 caaaacacaggtgtacaacac 70726
>gb|AC154257.2| Mus musculus BAC clone RP24-211E15 from chromosome 13, complete sequence Length = 152267 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 123 aaaagaaaagaagaacaaaacacag 147 |||||||||||||| |||||||||| Sbjct: 56360 aaaagaaaagaagagcaaaacacag 56336
>gb|AC079609.4| Homo sapiens BAC clone RP11-105K1 from 2, complete sequence Length = 25769 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 caaaacacaggtgtacaacac 158 ||||||||||||||||||||| Sbjct: 8479 caaaacacaggtgtacaacac 8499
>gb|AC110275.13| Homo sapiens chromosome 8, clone RP11-122A17, complete sequence Length = 169699 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 114 caataaaccaaaagaaaagaagaacaaaa 142 ||||||| ||||||||||||| ||||||| Sbjct: 36174 caataaaacaaaagaaaagaacaacaaaa 36146
>emb|BX322554.3| Zebrafish DNA sequence from clone RP71-68G1 in linkage group 9, complete sequence Length = 138869 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 aaagaaaagaagaacaaaaca 144 ||||||||||||||||||||| Sbjct: 131073 aaagaaaagaagaacaaaaca 131093
>gb|AC007954.7|AC007954 Homo sapiens chromosome 14 clone RP11-493G17 and CTD-2516D11 map 14q24.3, complete sequence Length = 210204 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 116 ataaaccaaaagaaaagaagaacaaaaca 144 |||||||||||||||| ||||| |||||| Sbjct: 197249 ataaaccaaaagaaaaaaagaaaaaaaca 197277
>emb|AJ313482.1|TNI313482 Tetraodon nigroviridis trap alpha gene for translocon associated protein alpha homolog, exons 1-9 Length = 4607 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccaaccaataaacaatcaata 118 ||||||||||||||||||||| Sbjct: 1103 ccaaccaataaacaatcaata 1083
>gb|AC154870.4| Monodelphis domestica, clone XX-218A9, complete sequence Length = 133508 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gtcctcttgccatagagatgc 302 ||||||||||||||||||||| Sbjct: 76706 gtcctcttgccatagagatgc 76726
>gb|AF111168.2|AF111168 Homo sapiens serine palmitoyl transferase, subunit II gene, complete cds; and unknown genes Length = 231464 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 116 ataaaccaaaagaaaagaagaacaaaaca 144 |||||||||||||||| ||||| |||||| Sbjct: 12867 ataaaccaaaagaaaaaaagaaaaaaaca 12895
>gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, complete sequence Length = 172330 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 tgattgattgggagaaatgg 413 |||||||||||||||||||| Sbjct: 33595 tgattgattgggagaaatgg 33614
>ref|XM_520613.1| PREDICTED: Pan troglodytes similar to KIAA1529 protein (LOC465137), mRNA Length = 477 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 aagggagtcttgtggtcctt 510 |||||||||||||||||||| Sbjct: 337 aagggagtcttgtggtcctt 356
>gb|AE001418.1| Plasmodium falciparum 3D7 chromosome 2 section 55 of 73 of the complete sequence Length = 12593 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aaaagaaaagaagaacaaaa 142 |||||||||||||||||||| Sbjct: 11847 aaaagaaaagaagaacaaaa 11828
>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111O13, complete sequence Length = 126332 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aataaaccaaaagaaaagaa 134 |||||||||||||||||||| Sbjct: 116227 aataaaccaaaagaaaagaa 116208
>gb|AC009905.12| Drosophila melanogaster clone BACR21E16, complete sequence Length = 170662 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aaaagaaaagaagaacaaaacaca 146 |||||||||||| ||||||||||| Sbjct: 5383 aaaagaaaagaaaaacaaaacaca 5360
>gb|AC009341.7| Drosophila melanogaster clone BACR07G13, complete sequence Length = 183723 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aaaagaaaagaagaacaaaacaca 146 |||||||||||| ||||||||||| Sbjct: 165522 aaaagaaaagaaaaacaaaacaca 165499
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aaacaatcaataaaccaaaa 126 |||||||||||||||||||| Sbjct: 1832537 aaacaatcaataaaccaaaa 1832556
>gb|AC149542.1| Populus trichocarpa clone Pop1-2C5, complete sequence Length = 146274 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aaaagaaaagaagaacaaaa 142 |||||||||||||||||||| Sbjct: 83464 aaaagaaaagaagaacaaaa 83483
>gb|AC145992.2| Pan troglodytes BAC clone RP43-172K3 from 7, complete sequence Length = 208817 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 aaaagaaaagaagaacaaaacaca 146 |||||||||||| ||||||||||| Sbjct: 206110 aaaagaaaagaaaaacaaaacaca 206133
>gb|AC120418.10| Mus musculus chromosome 6, clone RP24-474I24, complete sequence Length = 177307 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aaaagaaaagaagaacaaaa 142 |||||||||||||||||||| Sbjct: 17493 aaaagaaaagaagaacaaaa 17474
>gb|AF242738.3| Bacteriophage phi LC3, complete genome Length = 32172 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 atcaataaaccaaaagaaaa 131 |||||||||||||||||||| Sbjct: 21216 atcaataaaccaaaagaaaa 21235
>gb|AC135637.5| Mus musculus BAC clone RP23-298I23 from chromosome 14, complete sequence Length = 130323 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aataaaccaaaagaaaagaa 134 |||||||||||||||||||| Sbjct: 66328 aataaaccaaaagaaaagaa 66309
>gb|AC131581.8| Mus musculus chromosome 16, clone RP23-89A11, complete sequence Length = 169623 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aaagaaaagaagaacaaaac 143 |||||||||||||||||||| Sbjct: 21977 aaagaaaagaagaacaaaac 21996
>gb|AC138722.3| Mus musculus BAC clone RP23-113B10 from chromosome 16, complete sequence Length = 227299 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aaagaaaagaagaacaaaac 143 |||||||||||||||||||| Sbjct: 112085 aaagaaaagaagaacaaaac 112104
>gb|AC107798.10| Mus musculus chromosome 8, clone RP23-4D24, complete sequence Length = 234420 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 107 aaacaatcaataaaccaaaagaaaagaa 134 |||||| ||| ||||||||||||||||| Sbjct: 177502 aaacaaacaaaaaaccaaaagaaaagaa 177529
>gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, complete sequence Length = 208907 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 caaaagaaaagaagaacaaaacac 145 ||||||||||||| |||||||||| Sbjct: 97413 caaaagaaaagaaaaacaaaacac 97436
>gb|AC140235.3| Mus musculus BAC clone RP24-272D15 from chromosome 7, complete sequence Length = 185617 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aaaccaaaagaaaagaagaa 137 |||||||||||||||||||| Sbjct: 54766 aaaccaaaagaaaagaagaa 54747
>gb|AC125208.2| Mus musculus BAC clone RP23-183I4 from 6, complete sequence Length = 218080 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 taaaccaaaagaaaagaagaacaaaaca 144 ||||||||||||||| || ||||||||| Sbjct: 116622 taaaccaaaagaaaacaaaaacaaaaca 116595
>gb|AC121929.2| Mus musculus BAC clone RP24-204J10 from 5, complete sequence Length = 143840 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 aaaccaaaagaaaagaagaacaaa 141 ||||||||||||||||| |||||| Sbjct: 100551 aaaccaaaagaaaagaaaaacaaa 100528
>gb|AC121995.2| Mus musculus BAC clone RP24-310M4 from 7, complete sequence Length = 126991 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aaaccaaaagaaaagaagaa 137 |||||||||||||||||||| Sbjct: 48997 aaaccaaaagaaaagaagaa 49016
>gb|AC006451.5| Homo sapiens PAC clone RP4-562A11 from 7, complete sequence Length = 145966 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aaaagaaaagaagaacaaaacaca 146 |||||||||||| ||||||||||| Sbjct: 25205 aaaagaaaagaaaaacaaaacaca 25182
>ref|XM_663941.1| Plasmodium berghei strain ANKA hypothetical protein (PB405402.00.0) partial mRNA Length = 268 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aaaccaaaagaaaagaagaa 137 |||||||||||||||||||| Sbjct: 84 aaaccaaaagaaaagaagaa 103
>ref|XM_662770.1| Cryptosporidium hominis TU502 CP15/60 (Chro.40225) partial mRNA Length = 1467 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aaaagaaaagaagaacaaaa 142 |||||||||||||||||||| Sbjct: 555 aaaagaaaagaagaacaaaa 574
>gb|AC163450.5| Mus musculus chromosome 1, clone RP23-209F20, complete sequence Length = 182102 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 caataaacaatcaataaaccaaaa 126 |||||||||||||| ||||||||| Sbjct: 96984 caataaacaatcaaaaaaccaaaa 97007
>gb|U49946.1| Caenorhabditis elegans cosmid C09E10, complete sequence Length = 25100 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 accaaaagaaaagaagaaca 139 |||||||||||||||||||| Sbjct: 906 accaaaagaaaagaagaaca 925
>gb|AC156941.3| Mus musculus BAC clone RP23-25D8 from chromosome 14, complete sequence Length = 214940 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aataaaccaaaagaaaagaa 134 |||||||||||||||||||| Sbjct: 33972 aataaaccaaaagaaaagaa 33991
>gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, complete sequence Length = 178050 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aaaagaaaagaagaacaaaacaca 146 |||||||||||| ||||||||||| Sbjct: 143423 aaaagaaaagaaaaacaaaacaca 143400
>emb|AL163282.2|HS21C082 Homo sapiens chromosome 21 segment HS21C082 Length = 340000 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 aagaaaagaagaacaaaaca 144 |||||||||||||||||||| Sbjct: 284471 aagaaaagaagaacaaaaca 284490
>gb|AC151725.26| Medicago truncatula clone mth2-164l16, complete sequence Length = 115069 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 aatcaataaaccaaaagaaaagaa 134 |||||| ||||||||||||||||| Sbjct: 87222 aatcaagaaaccaaaagaaaagaa 87199
>gb|AC161366.6| Mus musculus BAC clone RP24-230D17 from chromosome 9, complete sequence Length = 155733 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 aaacaatcaataaaccaaaagaaa 130 |||||||||| ||||||||||||| Sbjct: 122750 aaacaatcaaaaaaccaaaagaaa 122773
>emb|BX664742.15| Zebrafish DNA sequence from clone DKEY-193L3 in linkage group 8, complete sequence Length = 215608 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aaacaatcaataaaccaaaa 126 |||||||||||||||||||| Sbjct: 89192 aaacaatcaataaaccaaaa 89211
>emb|AL591502.10| Human DNA sequence from clone RP11-199C17 on chromosome 9 Contains the 5' end of the TBC1D2 gene for TBC1 domain family, member 2 (PARIS1, PARIS-1,DKFZP761D1823, DKFZp761D1823), the 3' end of the GPR51 gene for G protein-coupled receptor 51 (HG20, GABBR2, GPRC3B, GABABR2) and a CpG island, complete sequence Length = 156753 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 ttgattgattgggagaaatgggac 416 ||||||||||||| |||||||||| Sbjct: 83456 ttgattgattgggtgaaatgggac 83433
>emb|AL357045.10| Human DNA sequence from clone RP4-794L19 on chromosome 1 Contains the 3' end of the TBX15 gene for T-box 15, complete sequence Length = 141277 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 atcaataaaccaaaagaaaa 131 |||||||||||||||||||| Sbjct: 8665 atcaataaaccaaaagaaaa 8646
>gb|AC160467.3| Mus musculus chromosome 1, clone RP23-382C4, complete sequence Length = 181197 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 taaacaatcaataaaccaaa 125 |||||||||||||||||||| Sbjct: 164560 taaacaatcaataaaccaaa 164541
>gb|AC112162.8| Mus Musculus chromosome 9 BAC clone MGS1-296M6 ES cell line, complete sequence Length = 116580 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 aaacaatcaataaaccaaaagaaa 130 |||||||||| ||||||||||||| Sbjct: 96528 aaacaatcaaaaaaccaaaagaaa 96551
>gb|AC120011.16| Mus musculus chromosome 5, clone RP24-211L21, complete sequence Length = 159960 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ttattttcccatctctcagg 371 |||||||||||||||||||| Sbjct: 20572 ttattttcccatctctcagg 20591
>emb|BX842594.1| Neurospora crassa DNA linkage group II BAC clone B18P7 Length = 95637 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 accattaccaaccaataaac 110 |||||||||||||||||||| Sbjct: 65327 accattaccaaccaataaac 65308
>emb|AL132964.2|ATT9C5 Arabidopsis thaliana DNA chromosome 3, BAC clone T9C5 Length = 104204 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aaaccaaaagaaaagaagaa 137 |||||||||||||||||||| Sbjct: 65919 aaaccaaaagaaaagaagaa 65938
>emb|AJ851747.1| Gallus gallus mRNA for hypothetical protein, clone 25f13 Length = 3586 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aaaagaaaagaagaacaaaa 142 |||||||||||||||||||| Sbjct: 2882 aaaagaaaagaagaacaaaa 2901
>emb|BX664746.10| Zebrafish DNA sequence from clone DKEY-218P9 in linkage group 8, complete sequence Length = 106404 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aaacaatcaataaaccaaaa 126 |||||||||||||||||||| Sbjct: 71805 aaacaatcaataaaccaaaa 71824
>gb|AC010659.5| Drosophila melanogaster 3L BAC RP98-13C22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 162345 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aaaccaaaagaaaagaagaa 137 |||||||||||||||||||| Sbjct: 9757 aaaccaaaagaaaagaagaa 9776
>gb|AC027343.7| Homo sapiens chromosome 5 clone CTD-2296D1, complete sequence Length = 68651 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 caaaacacaggtgtacaaca 157 |||||||||||||||||||| Sbjct: 1104 caaaacacaggtgtacaaca 1123
>gb|AC105315.5| Homo sapiens BAC clone RP11-376M9 from 4, complete sequence Length = 17816 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aaaccaaaagaaaagaagaa 137 |||||||||||||||||||| Sbjct: 14578 aaaccaaaagaaaagaagaa 14597
>gb|AC113373.2| Homo sapiens chromosome 5 clone RP11-20L22, complete sequence Length = 104135 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 taaacaatcaataaaccaaa 125 |||||||||||||||||||| Sbjct: 74509 taaacaatcaataaaccaaa 74528
>gb|AC093546.2| Drosophila melanogaster 3L BAC RP98-8G7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 207761 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aaaccaaaagaaaagaagaa 137 |||||||||||||||||||| Sbjct: 193199 aaaccaaaagaaaagaagaa 193218
>gb|AC010250.7| Homo sapiens chromosome 5 clone CTC-425H14, complete sequence Length = 157061 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 taaacaatcaataaaccaaa 125 |||||||||||||||||||| Sbjct: 118550 taaacaatcaataaaccaaa 118531
>dbj|AK156506.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830027O05 product:unclassifiable, full insert sequence Length = 4613 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 caaaagaaaagaagaacaaaacac 145 ||||||||||||| |||||||||| Sbjct: 2076 caaaagaaaagaaaaacaaaacac 2053
>gb|AC159825.2| Mus musculus BAC clone RP23-100J21 from chromosome 9, complete sequence Length = 209633 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 aacaatcaataaaccaaaagaaaa 131 ||||||||| |||||||||||||| Sbjct: 62488 aacaatcaacaaaccaaaagaaaa 62511
>dbj|AK085847.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830016K24 product:unclassifiable, full insert sequence Length = 1684 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 taaacaatcaataaaccaaa 125 |||||||||||||||||||| Sbjct: 1295 taaacaatcaataaaccaaa 1314
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ctttcaatcttgcttatttt 358 |||||||||||||||||||| Sbjct: 8539250 ctttcaatcttgcttatttt 8539269
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aataaaccaaaagaaaagaa 134 |||||||||||||||||||| Sbjct: 2283796 aataaaccaaaagaaaagaa 2283777
>gb|AC092291.3| Homo sapiens chromosome 16 clone CTD-2502C11, complete sequence Length = 194551 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 caaaagaaaagaagaacaaa 141 |||||||||||||||||||| Sbjct: 73792 caaaagaaaagaagaacaaa 73811
>gb|AC007353.5| Homo sapiens chromosome 16 clone RP11-488I20, complete sequence Length = 201061 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 aagggagtcttgtggtcctt 510 |||||||||||||||||||| Sbjct: 114334 aagggagtcttgtggtcctt 114315
>gb|AC104592.6| Homo sapiens chromosome 8, clone RP11-714N16, complete sequence Length = 154338 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aaaagaaaagaagaacaaaa 142 |||||||||||||||||||| Sbjct: 53048 aaaagaaaagaagaacaaaa 53029
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0478H03 Length = 167560 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ccaaaagaaaagaagaacaaaaca 144 ||||||||||||||||| |||||| Sbjct: 60292 ccaaaagaaaagaagaataaaaca 60269
>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445E10 Length = 145912 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ccaaaagaaaagaagaacaaaaca 144 ||||||||||||||||| |||||| Sbjct: 109779 ccaaaagaaaagaagaataaaaca 109756
>ref|NM_001012785.1| Gallus gallus similar to treacle (LOC416276), mRNA Length = 3586 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aaaagaaaagaagaacaaaa 142 |||||||||||||||||||| Sbjct: 2882 aaaagaaaagaagaacaaaa 2901
>gb|AC091951.3| Homo sapiens chromosome 5 clone RP11-404K5, complete sequence Length = 160174 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 caaaacacaggtgtacaaca 157 |||||||||||||||||||| Sbjct: 13398 caaaacacaggtgtacaaca 13379
>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0092H22 Length = 165194 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ctttcaatcttgcttatttt 358 |||||||||||||||||||| Sbjct: 153951 ctttcaatcttgcttatttt 153970
>dbj|AP004630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0031A09 Length = 162511 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ctttcaatcttgcttatttt 358 |||||||||||||||||||| Sbjct: 14069 ctttcaatcttgcttatttt 14088
>dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSJ11 Length = 81370 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aaaagaaaagaagaacaaaa 142 |||||||||||||||||||| Sbjct: 22726 aaaagaaaagaagaacaaaa 22745
>gb|AE003654.3| Drosophila melanogaster chromosome 2L, section 63 of 83 of the complete sequence Length = 258558 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aaaagaaaagaagaacaaaacaca 146 |||||||||||| ||||||||||| Sbjct: 154411 aaaagaaaagaaaaacaaaacaca 154388
>gb|AE003539.3| Drosophila melanogaster chromosome 3L, section 46 of 83 of the complete sequence Length = 272016 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aaaccaaaagaaaagaagaa 137 |||||||||||||||||||| Sbjct: 221133 aaaccaaaagaaaagaagaa 221152
>gb|AC133519.3| Mus musculus BAC clone RP23-178N8 from chromosome 5, complete sequence Length = 219269 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 aaaccaaaagaaaagaagaacaaa 141 ||||||||||||||||| |||||| Sbjct: 52777 aaaccaaaagaaaagaaaaacaaa 52754
>gb|AC152872.3| Mus musculus chromosome 5, clone wi1-2064F7, complete sequence Length = 30690 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ttattttcccatctctcagg 371 |||||||||||||||||||| Sbjct: 24930 ttattttcccatctctcagg 24949
>gb|AC153617.3| Mus musculus 6 BAC RP23-177G20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199525 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aaaagaaaagaagaacaaaa 142 |||||||||||||||||||| Sbjct: 57584 aaaagaaaagaagaacaaaa 57603
>gb|AC005304.1|AC005304 Homo sapiens chromosome 17, clone hRPK.131_K_5, complete sequence Length = 164017 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 104 aataaacaatcaataaaccaaaagaaaa 131 ||||||||| ||||||||||||||||| Sbjct: 148321 aataaacaagaaataaaccaaaagaaaa 148294
>gb|AC122463.4| Mus musculus BAC clone RP24-296C19 from 9, complete sequence Length = 162528 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 aaacaatcaataaaccaaaagaaa 130 |||||||||| ||||||||||||| Sbjct: 92824 aaacaatcaaaaaaccaaaagaaa 92801
>emb|CT010463.9| Mouse DNA sequence from clone RP23-193M19 on chromosome 12, complete sequence Length = 250364 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 tcaataaaccaaaagaaaagaaga 136 |||| ||||||||||||||||||| Sbjct: 71516 tcaaaaaaccaaaagaaaagaaga 71539
>gb|AF042090.1|AF042090 Homo sapiens chromosome 21q22.3 PAC 171F15, complete sequence Length = 155407 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 aagaaaagaagaacaaaaca 144 |||||||||||||||||||| Sbjct: 122688 aagaaaagaagaacaaaaca 122707
>emb|AL772395.12| Mouse DNA sequence from clone RP23-39O1 on chromosome 4, complete sequence Length = 183256 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aaaccaaaagaaaagaagaa 137 |||||||||||||||||||| Sbjct: 169907 aaaccaaaagaaaagaagaa 169888
>gb|U38906.1|BRU38906 Bacteriophage r1t integrase, repressor protein (rro), dUTPase, holin and lysin genes, complete cds Length = 33350 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 atcaataaaccaaaagaaaa 131 |||||||||||||||||||| Sbjct: 22739 atcaataaaccaaaagaaaa 22758
>emb|AL845290.7| Mouse DNA sequence from clone RP23-201A19 on chromosome 2, complete sequence Length = 146005 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ataaaccaaaagaaaagaag 135 |||||||||||||||||||| Sbjct: 34723 ataaaccaaaagaaaagaag 34704
>emb|AL596088.14| Mouse DNA sequence from clone RP23-157O10 on chromosome 11, complete sequence Length = 233204 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aaaagaaaagaagaacaaaa 142 |||||||||||||||||||| Sbjct: 98190 aaaagaaaagaagaacaaaa 98171
>emb|AL663095.14| Mouse DNA sequence from clone RP23-211M16 on chromosome X, complete sequence Length = 217249 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 aacaatcaataaaccaaaagaaaa 131 |||||| ||||||||||||||||| Sbjct: 180943 aacaatgaataaaccaaaagaaaa 180966
>emb|AL645468.11| Mouse DNA sequence from clone RP23-246F18 on chromosome 4, complete sequence Length = 209764 Score = 40.1 bits (20), Expect = 9.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 107 aaacaatcaataaaccaaaagaaaagaagaacaaaa 142 |||||| ||| ||||||||||||||| | ||||||| Sbjct: 135456 aaacaaacaaaaaaccaaaagaaaagcaaaacaaaa 135421
>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03, complete sequence Length = 107870 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aataaaccaaaagaaaagaa 134 |||||||||||||||||||| Sbjct: 11711 aataaaccaaaagaaaagaa 11692
>gb|AC102191.11| Mus musculus chromosome 1, clone RP24-244I20, complete sequence Length = 190015 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 taaacaatcaataaaccaaa 125 |||||||||||||||||||| Sbjct: 36730 taaacaatcaataaaccaaa 36749
>gb|AC092470.9| Homo sapiens 12 BAC RP11-72J9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 96100 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 aataaacaatcaataaacca 123 |||||||||||||||||||| Sbjct: 19106 aataaacaatcaataaacca 19087 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,604,351 Number of Sequences: 3902068 Number of extensions: 6604351 Number of successful extensions: 148843 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 148225 Number of HSP's gapped (non-prelim): 616 length of query: 701 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 678 effective length of database: 17,143,297,704 effective search space: 11623155843312 effective search space used: 11623155843312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)