>UN93L_ARATH (Q94AA1) UNC93-like protein|
          Length = 464

 Score =  104 bits (260), Expect = 2e-22
 Identities = 52/80 (65%), Positives = 63/80 (78%)
 Frame = -2

Query: 645 LLFYSPMEGLLGAAIPLFIGALWGVGDGVLNTQLSALLGLLFEDVKEAAFAQLKVWQSGA 466
           LL Y    G+LG A PL + A+ G+GDG+LNTQ+SALL LLF+   E AFAQLKVWQS A
Sbjct: 332 LLGYRQTSGVLGTAYPLIMAAILGIGDGILNTQISALLALLFKHDTEGAFAQLKVWQSAA 391

Query: 465 IAVIFFLSPSITLQAMLILM 406
           IA++FFLSP I+LQAMLI+M
Sbjct: 392 IAIVFFLSPYISLQAMLIVM 411

>UN93A_BRARE (Q5SPF7) UNC93 homolog A|
          Length = 465

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 34/92 (36%), Positives = 48/92 (52%)
 Frame = -2

Query: 645 LLFYSPMEGLLGAAIPLFIGALWGVGDGVLNTQLSALLGLLFEDVKEAAFAQLKVWQSGA 466
           LL++ P    L  AI     ALWG+ D V  TQ +AL G+LF   KEAAFA  ++W+S  
Sbjct: 336 LLYWKPHPDQL--AIFFVFPALWGMADAVWQTQTNALYGILFAKNKEAAFANYRMWESLG 393

Query: 465 IAVIFFLSPSITLQAMLILMATSLAISFGLFL 370
             + F  S  I L   + +    LA++   +L
Sbjct: 394 FVIAFAYSTFICLSTKIYIALAVLALTMVTYL 425

>UN93L_DROME (Q9Y115) UNC93-like protein|
          Length = 538

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 25/82 (30%), Positives = 46/82 (56%)
 Frame = -2

Query: 591 IGALWGVGDGVLNTQLSALLGLLFEDVKEAAFAQLKVWQSGAIAVIFFLSPSITLQAMLI 412
           +  LWGVGD V  TQ++ L GLLF   KEAAF+  ++W+S    + +  + ++  Q  L 
Sbjct: 399 MSGLWGVGDAVWQTQINGLYGLLFRRNKEAAFSNYRLWESAGFVIAYAYATTLCTQMKLY 458

Query: 411 LMATSLAISFGLFLLLTLVVEK 346
           ++   L +    ++++ ++  K
Sbjct: 459 ILLAVLTLGCIGYVIVEILYRK 480

>UN93A_HUMAN (Q86WB7) UNC93 homolog A (UNC-93A protein) (HmUNC-93A)|
          Length = 457

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
 Frame = -2

Query: 645 LLFYSPMEGLLGAAIPLFIGALWGVGDGVLNTQLSALLGLLFEDVKEAAFAQLKVWQSGA 466
           LL + P    L  A+      LWGV D V  TQ +AL G+LFE  KEAAFA  ++W++  
Sbjct: 337 LLLWRPRADHL--AVFFVFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLWEALG 394

Query: 465 IAVIFFLSPSITLQAMLILMATSLAISFGLFLLLTLVVEK-PSTIRA*GESN 313
             + F  S  + +   L ++   L+++   + L+  V  K P    A G+ N
Sbjct: 395 FVIAFGYSMFLCVHVKLYILLGVLSLTMVAYGLVECVESKNPIRPHAPGQVN 446

>UN93A_XENLA (Q6DDL7) UNC93 homolog A|
          Length = 460

 Score = 52.8 bits (125), Expect = 9e-07
 Identities = 24/74 (32%), Positives = 42/74 (56%)
 Frame = -2

Query: 606 AIPLFIGALWGVGDGVLNTQLSALLGLLFEDVKEAAFAQLKVWQSGAIAVIFFLSPSITL 427
           A+     A+WG+ D +  TQ +AL G+LF++ KEAAFA  ++W+S    + +  S  + +
Sbjct: 349 AVFFIFPAIWGMADAIWQTQTNALYGVLFDEHKEAAFANYRLWESLGFVIAYGYSTFLCV 408

Query: 426 QAMLILMATSLAIS 385
              L ++   L I+
Sbjct: 409 SVKLYILLAVLLIA 422

>UN93B_MOUSE (Q8VCW4) UNC93 homolog B1 (UNC-93B protein)|
          Length = 598

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
 Frame = -2

Query: 645 LLFYSPMEGLLGAA-IPLFIGALWGVGDGVLNTQLSALLGLLFEDV--KEAAFAQLKVWQ 475
           L F++P   +L  + I  F+ ALWGVG  +  T LS LLG+L+ED   ++  F     WQ
Sbjct: 419 LFFWAPAPRVLQHSWIFYFVAALWGVGSALNKTGLSTLLGILYEDKERQDFIFTIYHWWQ 478

Query: 474 SGAIAVIFFLSPSITLQAMLILMATSLAISFGLFL 370
           + AI V+ +L  S+ ++A L ++  +L  +   +L
Sbjct: 479 AVAIFVV-YLGSSLPMKAKLAVLLVTLVAAAASYL 512

>UN93B_HUMAN (Q9H1C4) UNC93 homolog B1 (UNC-93B protein) (hUNC93B1)|
          Length = 597

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = -2

Query: 645 LLFYSPMEGLLGAAIPLFIGA-LWGVGDGVLNTQLSALLGLLFEDV--KEAAFAQLKVWQ 475
           L F++P+  +L  +  L++ A LWGVG  +  T LS LLG+L+ED   ++  F     WQ
Sbjct: 419 LFFWAPVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYEDKERQDFIFTIYHWWQ 478

Query: 474 SGAIAVIFFLSPSITLQAMLILMATSL 394
           + AI  + +L  S+ ++A L ++  +L
Sbjct: 479 AVAIFTV-YLGSSLHMKAKLAVLLVTL 504

>UN93A_MOUSE (Q710D3) UNC93 homolog A (UNC-93A protein)|
          Length = 458

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
 Frame = -2

Query: 603 IPLF--IGALWGVGDGVLNTQLSALLGLLFEDVKEAAFAQLKVWQSGAIAVIFFLSPSIT 430
           +P+F  +  LWG+ D V  TQ +AL G+LFE+ KE AFA  ++ ++    + F  S  + 
Sbjct: 348 LPVFFVLSGLWGMSDAVWQTQNNALFGVLFEENKEPAFANYRLGEAIGFVIAFGYSSFLC 407

Query: 429 LQAMLILMATSLAIS 385
           +   L ++   L+++
Sbjct: 408 VSTKLYILLGVLSLA 422

>UNC93_CAEEL (Q93380) Putative potassium channel regulatory protein unc-93|
           (Uncoordinated protein 93)
          Length = 705

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = -2

Query: 591 IGALWGVGDGVLNTQLSAL-LGLLFEDVKEAAFAQLKVWQSGAIAVIFFLSPSITLQAML 415
           + A+WG+ DGV NTQ++   + L+     + AF + + W+S  IA+ F L   +T++  L
Sbjct: 597 VAAMWGMADGVWNTQINGFWVALVGRQSLQFAFTKYRFWESLGIAIGFALIRHVTVEIYL 656

Query: 414 ILMATSLAISFGLFLLL 364
           ++    L +    FL +
Sbjct: 657 LITFFMLLLGMCGFLAI 673

>FBX38_MOUSE (Q8BMI0) F-box only protein 38 (Modulator of KLF7 activity) (MoKA)|
          Length = 1194

 Score = 33.5 bits (75), Expect = 0.55
 Identities = 22/74 (29%), Positives = 35/74 (47%)
 Frame = +2

Query: 407 IKISMACSVMLGLKKKMTAMAPDCQTFNCAKAASLTSSNSNPSNALNCVFKTPSPTPHKA 586
           IK  M  +  +  KKK   + P C + + + AAS   + S+PS A      + SP   + 
Sbjct: 683 IKADMKAARDVSEKKKSKDVYPSCSSSSSSTAASTAGNASSPSTA------SQSPDFART 736

Query: 587 PINSGIAAPSSPSI 628
             +SG + PS P +
Sbjct: 737 VTSSGSSEPSPPEV 750

>NU5M_CROLA (P34195) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 612

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 34/106 (32%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
 Frame = -2

Query: 621 GLLGAAIPLFIGALWGVGDGVLNTQLSALLGLLFEDVKEAAFAQLKVW-----QSGAIAV 457
           G  G  I  F+   W  G    NT  +AL   ++  V +        W      S  I  
Sbjct: 148 GWEGVGIMSFLLIGWWYGRADANT--AALQAWIYNRVGDIGLIMSMAWLAMNLNSWEIQQ 205

Query: 456 IFFLSPS--ITLQAM-LILMATSLAISFGLFLLLTLVVEKPSTIRA 328
           IFFLS    +TL  M LIL AT  +  FGL   L   +E P+ + A
Sbjct: 206 IFFLSKDFDMTLPLMGLILAATGKSAQFGLHPWLPAAMEGPTPVSA 251

>NU5M_RABIT (O79437) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 603

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
 Frame = -2

Query: 621 GLLGAAIPLFIGALWGVGDGVLNTQLSALLGLLFEDVKEAAFAQLKVW-----QSGAIAV 457
           G  G  I  F+   W  G    NT  +AL  +L+  + +  F     W      +  +  
Sbjct: 143 GWEGVGIMSFLLIGWWHGRTDANT--AALQAILYNRIGDIGFIMALAWFAINLNTWELQQ 200

Query: 456 IFFLSPSITLQAM--LILMATSLAISFGLFLLLTLVVEKPSTIRA 328
           IF L  +IT+  +  LIL AT  +  FGL   L   +E P+ + A
Sbjct: 201 IFILDNNITILPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSA 245

>ASPM_BOVIN (P62285) Abnormal spindle-like microcephaly-associated protein|
            homolog (Fragment)
          Length = 3371

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = -1

Query: 196  ITAQRHYNMHIMLFISAVVCWRSEVKRFEAKRGKRESALHLVSCHFSMSCYRNH 35
            +  QR Y   + +   AV+C +S  + F+A+RG +   +HL +     SCYR H
Sbjct: 2567 VFVQRRYRELMAVRTQAVICIQSCFRGFKARRGIQR--MHLAATRI-QSCYRRH 2617

>ASPM_SHEEP (P62297) Abnormal spindle-like microcephaly-associated protein|
            homolog (Fragment)
          Length = 3374

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -1

Query: 196  ITAQRHYNMHIMLFISAVVCWRSEVKRFEAKRGKRESALHLVSCHFSMSCYRNH 35
            +  QR Y + + +   A +C +S  + F+A+RG +   +HL +     SCYR H
Sbjct: 2570 VFVQRRYRVLMAVRTQAAICIQSCFRGFKARRGIQ--GMHLAATRI-QSCYRRH 2620

>RWDD3_HUMAN (Q9Y3V2) RWD domain-containing protein 3|
          Length = 195

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 433 HTTSHAYLDGYVTRHLLWPVPVTYPCCREAINHQSLRRIQFQC 305
           HT +  ++D  +   L++ +PV YP C   I+  S +  + QC
Sbjct: 38  HTKAEGFMDADIPLELVFHLPVNYPSCLPGISINSEQLTRAQC 80

>ENV_HV1Z3 (P12491) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120)]
          Length = 460

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 476 CQTFNCAKAASLTSSNSNPSNALNCVFKTPSPTPHK 583
           C T NC    + T++N+  +   NC FK P+    K
Sbjct: 125 CVTLNCIDVKNSTNNNTEEATITNCSFKVPTELKDK 160

>ORN_CHRVO (Q7NVH5) Oligoribonuclease (EC 3.1.-.-)|
          Length = 181

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = -1

Query: 196 ITAQRHY-NMHIMLFISAVVCWRSEVKRFEAKRGKRESALHLVSCHFSMSCYRNHILNL 23
           + A  HY N+ +         WR E+ +   KRGK E+   ++     M  YR H L +
Sbjct: 123 LEAYFHYRNLDVSTLKELCKRWRPEIAKGVVKRGKHEALADILESIEEMRYYREHFLKV 181

>NU5M_SHEEP (O78756) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 606

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
 Frame = -2

Query: 621 GLLGAAIPLFIGALWGVGDGVLNTQLSALLGLLFEDVKEAAFAQLKVW-----QSGAIAV 457
           G  G  I  F+   W  G    NT  +AL  +L+  + +  F     W      +  +  
Sbjct: 143 GWEGVGIMSFLLIGWWYGRTDANT--AALQAILYNRIGDIGFILAMAWFLINLNTWDLQQ 200

Query: 456 IFFLSPSITLQAM--LILMATSLAISFGLFLLLTLVVEKPSTIRA 328
           IF L+P+ +   +  LIL AT  +  FGL   L   +E P+ + A
Sbjct: 201 IFMLNPNDSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSA 245

>AMDR_EMENI (P15699) Acetamidase regulatory protein|
          Length = 765

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +2

Query: 428 SVMLGLKKKMTAMAPDCQTFNCAKAASLTSSNSNPSNALNCVFKTPSPTPHKAPINSGIA 607
           S +L L ++   +  D +T    +    ++ ++N +N+     K  S  PH A INS  A
Sbjct: 583 STILRLFEESRRLQEDLRTTTSDRPRRFSNLSNNSTNSPASQQKNTSGIPHLANINSSDA 642

Query: 608 A-PSSPSI 628
             PS+PSI
Sbjct: 643 TPPSAPSI 650

>TXLNB_MOUSE (Q8VBT1) Beta-taxilin (Muscle-derived protein 77)|
          Length = 685

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = +2

Query: 467 APDCQTFNCAKAASLTSSNSNPSNALNCVFKTPSPTPHKAPINSGIAAPSSPSIG 631
           A    T +C  A +   S   P+        TP P PHK   N+   AP SP+ G
Sbjct: 577 ATPAPTASCTPAEAELQSQGLPAE------NTPGPKPHKPEANTSGQAPLSPAQG 625

>FA86A_MOUSE (Q3UZW7) Protein FAM86A|
          Length = 335

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
 Frame = -3

Query: 404 LRHSPSPLACSCYLPLLSRSHQ--PSEP---------EANPISVCRQCRRHHMVSVTNSM 258
           ++H PS     C+L  L + H+  P+EP         E        QC R +++   NS 
Sbjct: 61  VQHGPSVKYARCFLSKLIKKHEAVPTEPLDALYEALAEVLMTQESTQCHRSYLLPSGNS- 119

Query: 257 HNHTVVLTSDMKLRRKSIIIHHGATPLQHAHYAIHLSRCLLE 132
                     + L   + I+ HG T L     A++L+   +E
Sbjct: 120 ----------VTLSESTAIVSHGTTGLVTWDAALYLAEWAIE 151

>UPPP_SYMTH (Q67LG6) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl|
           pyrophosphate phosphatase) (Bacitracin resistance
           protein)
          Length = 276

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = -2

Query: 579 WGVGDGVLNTQLSALLGLLFEDVKEAAFAQ 490
           WG+   VL T   A+ GLL EDV EA F Q
Sbjct: 96  WGI---VLGTVPGAIFGLLMEDVVEAVFRQ 122

>VTS1_YEAST (Q08831) Protein VTS1 (VTI1-2 suppressor protein 1)|
          Length = 523

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 473 DCQTFNCAKAASLTSSNSNPSNALNCVFKTPSPTPHKAPINSGI 604
           D Q  N     S +   ++P N  N +++  SP PH  PI+  I
Sbjct: 255 DTQILNIDSVFSSSPITNDPENTDNLLYQNWSPQPHSIPISQPI 298


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,783,289
Number of Sequences: 219361
Number of extensions: 2061605
Number of successful extensions: 6106
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6097
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)