ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18j04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 379 e-102
2gb|AY107119.1| Zea mays PCO095102 mRNA sequence 329 7e-87
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 194 3e-46
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 194 3e-46
5emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 194 3e-46
6emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 194 3e-46
7gb|AF377447.1| Zea mays subsp. mays clone GUA131 anonymous genom... 44 0.56
8emb|AJ564638.1|LSY564638 Lily symptomless virus genes for polyme... 44 0.56
9ref|XM_653411.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 2.2
10ref|XM_387252.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 2.2
11gb|AC149806.16| Medicago truncatula clone mth2-150h12, complete ... 42 2.2
12gb|AC120541.8| Mus musculus, clone RP23-286L18, complete sequence 42 2.2
13gb|AC019188.6| Homo sapiens BAC clone RP11-309H6 from 4, complet... 42 2.2
14emb|AL844570.9| Zebrafish DNA sequence from clone DKEY-20D18, co... 42 2.2
15gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.8
16gb|AY714308.1| Drosophila sechellia Mitch (mitch) gene, complete... 40 8.8
17gb|AY714307.1| Drosophila mauritiana Mitch (mitch) gene, complet... 40 8.8
18gb|AY714306.1| Drosophila simulans Mitch (mitch) gene, complete cds 40 8.8
19gb|AC009393.5| Drosophila melanogaster clone BACR17F05, complete... 40 8.8
20gb|AC126029.3| Mus musculus BAC clone RP23-389K5 from chromosome... 40 8.8
21gb|AC124362.3| Mus musculus BAC clone RP24-528N1 from chromosome... 40 8.8
22emb|AL118512.9|HSG248A21 Human DNA sequence from clone GS1-248A2... 40 8.8
23emb|AL662803.11| Mouse DNA sequence from clone RP23-215N10 on ch... 40 8.8
24gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, co... 40 8.8
25ref|NM_141982.2| Drosophila melanogaster CG7242-RA (CG7242), mRNA 40 8.8
26dbj|AK154638.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.8
27gb|AC092506.3| Homo sapiens chromosome 1 clone RP11-364B6, compl... 40 8.8
28gb|AC151737.3| Pan troglodytes BAC clone RP43-70B8 from chromoso... 40 8.8
29gb|AY051881.1| Drosophila melanogaster LD37196 full insert cDNA 40 8.8
30gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis thali... 40 8.8
31gb|AF219224.1|AF219224 Drosophila melanogaster clone BDGP LD3719... 40 8.8
32gb|AC006145.2|AC006145 Homo sapiens PAC clone RP4-560O14 from 7q... 40 8.8
33gb|AC006230.11|AC006230 Homo sapiens chromosome 4 clone C0287J14... 40 8.8
34gb|AE003698.3| Drosophila melanogaster chromosome 3R, section 36... 40 8.8
35gb|AC111082.23| Mus musculus chromosome 17, clone RP23-140I9, co... 40 8.8
36gb|AC140345.3| Mus musculus BAC clone RP24-66E22 from 13, comple... 40 8.8
37gb|DQ004855.1| Listeria bacteriophage P100, complete genome 40 8.8
38gb|AC172863.1| Brassica rapa subsp. pekinensis clone KBrB070M24,... 40 8.8
39gb|AC090939.2| Homo sapiens chromosome 3 clone RP11-127I14 map 3... 40 8.8 
>dbj|AK064852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H05, full
            insert sequence
          Length = 1754

 Score =  379 bits (191), Expect = e-102
 Identities = 284/315 (90%)
 Strand = Plus / Minus

                                                                        
Query: 331  tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 390
            ||||| ||| ||||||||||| |||||||| |||||||||| |||   ||| || |||||
Sbjct: 1400 tctgacggtcgatggcttctccacaacaagtgtaagtaacaagaatgcgccgaaagagat 1341

                                                                        
Query: 391  ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 450
            |  ||| |  || |||||||||||||||||||||||||| || ||  ||||||||| |||
Sbjct: 1340 gatgagcgcagtggccatcaagataagcatggcttgtagcgtaatatttgggctcaggaa 1281

                                                                        
Query: 451  gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcctt 510
            ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 1280 gaagatgactgcgatggcacccgattgccaaaccttcaactgtgcaaaagctgcctcctt 1221

                                                                        
Query: 511  gacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccatcacc 570
            ||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 1220 gacatcctcgaacagcagcccaagtaatgcacttaactgtgtattcaagacaccatcacc 1161

                                                                        
Query: 571  aacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctccattgg 630
            |||||||||||||||||||||||| |||||||  |||||||||||||||||  |||||||
Sbjct: 1160 aacaccccataaggcacctataaacagtggaactgctgcaccaagcagtccacccattgg 1101

                           
Query: 631  actgtaaaaaagaag 645
            |||||||||||||||
Sbjct: 1100 actgtaaaaaagaag 1086
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>gb|AY107119.1| Zea mays PCO095102 mRNA sequence
          Length = 1007

 Score =  329 bits (166), Expect = 7e-87
 Identities = 283/322 (87%)
 Strand = Plus / Minus

                                                                       
Query: 325 tcaggctctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaa 384
           ||||||||||| ||  |||| |||||| |||||||||||||| ||||||||   ||||||
Sbjct: 646 tcaggctctgacgggcgatgacttctcaacaacaagggtaaggaacaggaatgagccaaa 587

                                                                       
Query: 385 ggagatggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggct 444
           ||||||| |||| | ||  ||||||| || |||||||||||| || ||||||||||||||
Sbjct: 586 ggagatgacgagagccgcggccatcaggagaagcatggcttgcagcgtgatgcttgggct 527

                                                                       
Query: 445 caagaagaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgc 504
           || ||||||||||||||||||||| || || ||||| ||||||| ||||||||| || ||
Sbjct: 526 caggaagaagatgactgcgatggcgcccgactgccacaccttcagctgtgcaaaggcagc 467

                                                                       
Query: 505 ttccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactcc 564
            ||||||||||| |||||||| | |||||||||||| |||||||||||||||||||| ||
Sbjct: 466 ctccttgacatcttcgaacagaagcccaagtaatgcacttaactgtgtattcaagacacc 407

                                                                       
Query: 565 atcaccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctc 624
            |||||||||||||| ||||||||||| |||| ||| |||||||| ||||||||||| ||
Sbjct: 406 gtcaccaacaccccacaaggcacctatgaataatggtatcgctgcgccaagcagtccatc 347

                                 
Query: 625 cattggactgtaaaaaagaagc 646
           ||||||||||||||||||||||
Sbjct: 346 cattggactgtaaaaaagaagc 325
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  194 bits (98), Expect = 3e-46
 Identities = 122/130 (93%)
 Strand = Plus / Plus

                                                                            
Query: 507      ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 566
                ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||
Sbjct: 23342299 ccttgacatcctcgaacagcagcccaagtaatgcacttaactgtgtattcaagacaccat 23342358

                                                                            
Query: 567      caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 626
                |||||||||||||||||||||||||||| |||||||  |||||||||||||||||  |||
Sbjct: 23342359 caccaacaccccataaggcacctataaacagtggaactgctgcaccaagcagtccaccca 23342418

                          
Query: 627      ttggactgta 636
                ||||||||||
Sbjct: 23342419 ttggactgta 23342428



 Score =  172 bits (87), Expect = 9e-40
 Identities = 156/179 (87%)
 Strand = Plus / Plus

                                                                            
Query: 331      tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 390
                ||||| ||| ||||||||||| |||||||| |||||||||| |||   ||| || |||||
Sbjct: 23341977 tctgacggtcgatggcttctccacaacaagtgtaagtaacaagaatgcgccgaaagagat 23342036

                                                                            
Query: 391      ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 450
                |  ||| |  || |||||||||||||||||||||||||| || ||  ||||||||| |||
Sbjct: 23342037 gatgagcgcagtggccatcaagataagcatggcttgtagcgtaatatttgggctcaggaa 23342096

                                                                           
Query: 451      gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 509
                ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 23342097 gaagatgactgcgatggcacccgattgccaaaccttcaactgtgcaaaagctgcctcct 23342155



 Score =  163 bits (82), Expect = 9e-37
 Identities = 118/130 (90%)
 Strand = Plus / Plus

                                                                            
Query: 507      ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 566
                ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| ||||
Sbjct: 23336657 ccttgacatcctcgaacagcagcccaagtaatgcgcttaactgtgtatgtaagacaccat 23336716

                                                                            
Query: 567      caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 626
                |||||||||||||||| ||||||||||| |||||||  || |||||||||| |||  |||
Sbjct: 23336717 caccaacaccccataaagcacctataaacagtggaactgccgcaccaagcaatccaccca 23336776

                          
Query: 627      ttggactgta 636
                ||||||||||
Sbjct: 23336777 ttggactgta 23336786



 Score =  157 bits (79), Expect = 5e-35
 Identities = 154/179 (86%)
 Strand = Plus / Plus

                                                                            
Query: 331      tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 390
                |||| |||| ||||||||||| |||||||| |||||||||| |||   ||| || |||||
Sbjct: 23336335 tctggtggtcgatggcttctccacaacaagtgtaagtaacaagaatgagccgaaagagat 23336394

                                                                            
Query: 391      ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 450
                |  ||| |   | |||||||||||||||||||||||||| |||||  ||||||||| |||
Sbjct: 23336395 gatgagcgcaatggccatcaagataagcatggcttgtagcgtgatatttgggctcaggaa 23336454

                                                                           
Query: 451      gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 509
                ||||||||||||||||||||| |||||||||||| || |||||||||||||||| ||||
Sbjct: 23336455 gaagatgactgcgatggcacccgattgccaaaccctccactgtgcaaaagctgcctcct 23336513
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  194 bits (98), Expect = 3e-46
 Identities = 122/130 (93%)
 Strand = Plus / Plus

                                                                            
Query: 507      ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 566
                ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||
Sbjct: 23270490 ccttgacatcctcgaacagcagcccaagtaatgcacttaactgtgtattcaagacaccat 23270549

                                                                            
Query: 567      caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 626
                |||||||||||||||||||||||||||| |||||||  |||||||||||||||||  |||
Sbjct: 23270550 caccaacaccccataaggcacctataaacagtggaactgctgcaccaagcagtccaccca 23270609

                          
Query: 627      ttggactgta 636
                ||||||||||
Sbjct: 23270610 ttggactgta 23270619



 Score =  172 bits (87), Expect = 9e-40
 Identities = 156/179 (87%)
 Strand = Plus / Plus

                                                                            
Query: 331      tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 390
                ||||| ||| ||||||||||| |||||||| |||||||||| |||   ||| || |||||
Sbjct: 23270168 tctgacggtcgatggcttctccacaacaagtgtaagtaacaagaatgcgccgaaagagat 23270227

                                                                            
Query: 391      ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 450
                |  ||| |  || |||||||||||||||||||||||||| || ||  ||||||||| |||
Sbjct: 23270228 gatgagcgcagtggccatcaagataagcatggcttgtagcgtaatatttgggctcaggaa 23270287

                                                                           
Query: 451      gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 509
                ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 23270288 gaagatgactgcgatggcacccgattgccaaaccttcaactgtgcaaaagctgcctcct 23270346



 Score =  163 bits (82), Expect = 9e-37
 Identities = 118/130 (90%)
 Strand = Plus / Plus

                                                                            
Query: 507      ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 566
                ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| ||||
Sbjct: 23264848 ccttgacatcctcgaacagcagcccaagtaatgcgcttaactgtgtatgtaagacaccat 23264907

                                                                            
Query: 567      caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 626
                |||||||||||||||| ||||||||||| |||||||  || |||||||||| |||  |||
Sbjct: 23264908 caccaacaccccataaagcacctataaacagtggaactgccgcaccaagcaatccaccca 23264967

                          
Query: 627      ttggactgta 636
                ||||||||||
Sbjct: 23264968 ttggactgta 23264977



 Score =  157 bits (79), Expect = 5e-35
 Identities = 154/179 (86%)
 Strand = Plus / Plus

                                                                            
Query: 331      tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 390
                |||| |||| ||||||||||| |||||||| |||||||||| |||   ||| || |||||
Sbjct: 23264526 tctggtggtcgatggcttctccacaacaagtgtaagtaacaagaatgagccgaaagagat 23264585

                                                                            
Query: 391      ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 450
                |  ||| |   | |||||||||||||||||||||||||| |||||  ||||||||| |||
Sbjct: 23264586 gatgagcgcaatggccatcaagataagcatggcttgtagcgtgatatttgggctcaggaa 23264645

                                                                           
Query: 451      gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 509
                ||||||||||||||||||||| |||||||||||| || |||||||||||||||| ||||
Sbjct: 23264646 gaagatgactgcgatggcacccgattgccaaaccctccactgtgcaaaagctgcctcct 23264704
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>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 168063

 Score =  194 bits (98), Expect = 3e-46
 Identities = 122/130 (93%)
 Strand = Plus / Plus

                                                                          
Query: 507    ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 566
              ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||
Sbjct: 155417 ccttgacatcctcgaacagcagcccaagtaatgcacttaactgtgtattcaagacaccat 155476

                                                                          
Query: 567    caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 626
              |||||||||||||||||||||||||||| |||||||  |||||||||||||||||  |||
Sbjct: 155477 caccaacaccccataaggcacctataaacagtggaactgctgcaccaagcagtccaccca 155536

                        
Query: 627    ttggactgta 636
              ||||||||||
Sbjct: 155537 ttggactgta 155546



 Score =  172 bits (87), Expect = 9e-40
 Identities = 156/179 (87%)
 Strand = Plus / Plus

                                                                          
Query: 331    tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 390
              ||||| ||| ||||||||||| |||||||| |||||||||| |||   ||| || |||||
Sbjct: 155095 tctgacggtcgatggcttctccacaacaagtgtaagtaacaagaatgcgccgaaagagat 155154

                                                                          
Query: 391    ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 450
              |  ||| |  || |||||||||||||||||||||||||| || ||  ||||||||| |||
Sbjct: 155155 gatgagcgcagtggccatcaagataagcatggcttgtagcgtaatatttgggctcaggaa 155214

                                                                         
Query: 451    gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 509
              ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 155215 gaagatgactgcgatggcacccgattgccaaaccttcaactgtgcaaaagctgcctcct 155273



 Score =  163 bits (82), Expect = 9e-37
 Identities = 118/130 (90%)
 Strand = Plus / Plus

                                                                          
Query: 507    ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 566
              ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| ||||
Sbjct: 149775 ccttgacatcctcgaacagcagcccaagtaatgcgcttaactgtgtatgtaagacaccat 149834

                                                                          
Query: 567    caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 626
              |||||||||||||||| ||||||||||| |||||||  || |||||||||| |||  |||
Sbjct: 149835 caccaacaccccataaagcacctataaacagtggaactgccgcaccaagcaatccaccca 149894

                        
Query: 627    ttggactgta 636
              ||||||||||
Sbjct: 149895 ttggactgta 149904



 Score =  157 bits (79), Expect = 5e-35
 Identities = 154/179 (86%)
 Strand = Plus / Plus

                                                                          
Query: 331    tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 390
              |||| |||| ||||||||||| |||||||| |||||||||| |||   ||| || |||||
Sbjct: 149453 tctggtggtcgatggcttctccacaacaagtgtaagtaacaagaatgagccgaaagagat 149512

                                                                          
Query: 391    ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 450
              |  ||| |   | |||||||||||||||||||||||||| |||||  ||||||||| |||
Sbjct: 149513 gatgagcgcaatggccatcaagataagcatggcttgtagcgtgatatttgggctcaggaa 149572

                                                                         
Query: 451    gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 509
              ||||||||||||||||||||| |||||||||||| || |||||||||||||||| ||||
Sbjct: 149573 gaagatgactgcgatggcacccgattgccaaaccctccactgtgcaaaagctgcctcct 149631
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>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 162261

 Score =  194 bits (98), Expect = 3e-46
 Identities = 122/130 (93%)
 Strand = Plus / Minus

                                                                          
Query: 507    ccttgacatcctcgaacagcaacccaagtaatgcgcttaactgtgtattcaagactccat 566
              ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||
Sbjct: 159860 ccttgacatcctcgaacagcagcccaagtaatgcacttaactgtgtattcaagacaccat 159801

                                                                          
Query: 567    caccaacaccccataaggcacctataaatagtggaatcgctgcaccaagcagtccctcca 626
              |||||||||||||||||||||||||||| |||||||  |||||||||||||||||  |||
Sbjct: 159800 caccaacaccccataaggcacctataaacagtggaactgctgcaccaagcagtccaccca 159741

                        
Query: 627    ttggactgta 636
              ||||||||||
Sbjct: 159740 ttggactgta 159731



 Score =  172 bits (87), Expect = 9e-40
 Identities = 156/179 (87%)
 Strand = Plus / Minus

                                                                          
Query: 331    tctgatggttgatggcttctcgacaacaagggtaagtaacaggaacaggccaaaggagat 390
              ||||| ||| ||||||||||| |||||||| |||||||||| |||   ||| || |||||
Sbjct: 160182 tctgacggtcgatggcttctccacaacaagtgtaagtaacaagaatgcgccgaaagagat 160123

                                                                          
Query: 391    ggcgagtgacgtagccatcaagataagcatggcttgtagtgtgatgcttgggctcaagaa 450
              |  ||| |  || |||||||||||||||||||||||||| || ||  ||||||||| |||
Sbjct: 160122 gatgagcgcagtggccatcaagataagcatggcttgtagcgtaatatttgggctcaggaa 160063

                                                                         
Query: 451    gaagatgactgcgatggcacctgattgccaaaccttcaactgtgcaaaagctgcttcct 509
              ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 160062 gaagatgactgcgatggcacccgattgccaaaccttcaactgtgcaaaagctgcctcct 160004
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>gb|AF377447.1| Zea mays subsp. mays clone GUA131 anonymous genomic RFLP marker
           Asg26
          Length = 769

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 233 tggtcaatacaacagtgtggttgtgc 258
           |||||||||||| |||||||||||||
Sbjct: 454 tggtcaatacaagagtgtggttgtgc 479
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>emb|AJ564638.1|LSY564638 Lily symptomless virus genes for polymerase, TGBp1, TGBp2, TGBp3,
            coat protein and nucleic acid binding protein genomic
            RNA, isolate Sb
          Length = 8393

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 494  gcaaaagctgcttccttgacat 515
            ||||||||||||||||||||||
Sbjct: 3260 gcaaaagctgcttccttgacat 3239
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>ref|XM_653411.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0899.2), mRNA
          Length = 2385

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 109  cctcgaacctcttcacttcag 129
            |||||||||||||||||||||
Sbjct: 1324 cctcgaacctcttcacttcag 1344
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>ref|XM_387252.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07076.1)
            partial mRNA
          Length = 3288

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 435  tgcttgggctcaagaagaaga 455
            |||||||||||||||||||||
Sbjct: 3209 tgcttgggctcaagaagaaga 3229
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>gb|AC149806.16| Medicago truncatula clone mth2-150h12, complete sequence
          Length = 113593

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 54    atagaaaagtggcaggaaaccaaat 78
             ||||||||||||||| |||||||||
Sbjct: 66056 atagaaaagtggcagcaaaccaaat 66032
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>gb|AC120541.8| Mus musculus, clone RP23-286L18, complete sequence
          Length = 171942

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 246   agtgtggttgtgcatgctgtt 266
             |||||||||||||||||||||
Sbjct: 55875 agtgtggttgtgcatgctgtt 55855
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>gb|AC019188.6| Homo sapiens BAC clone RP11-309H6 from 4, complete sequence
          Length = 207835

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 11     ataagttataattaaattgag 31
              |||||||||||||||||||||
Sbjct: 127847 ataagttataattaaattgag 127867
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>emb|AL844570.9| Zebrafish DNA sequence from clone DKEY-20D18, complete sequence
          Length = 240816

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 118    tcttcacttcagacctccagc 138
              |||||||||||||||||||||
Sbjct: 107081 tcttcacttcagacctccagc 107061
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
             sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 513   catcctcgaacagcaacccaagta 536
             |||||||||||||||||| |||||
Sbjct: 78011 catcctcgaacagcaaccaaagta 77988
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>gb|AY714308.1| Drosophila sechellia Mitch (mitch) gene, complete cds
          Length = 1220

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 498 aagctgcttccttgacatcc 517
           ||||||||||||||||||||
Sbjct: 212 aagctgcttccttgacatcc 193
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>gb|AY714307.1| Drosophila mauritiana Mitch (mitch) gene, complete cds
          Length = 1228

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 498 aagctgcttccttgacatcc 517
           ||||||||||||||||||||
Sbjct: 212 aagctgcttccttgacatcc 193
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>gb|AY714306.1| Drosophila simulans Mitch (mitch) gene, complete cds
          Length = 1285

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 498 aagctgcttccttgacatcc 517
           ||||||||||||||||||||
Sbjct: 212 aagctgcttccttgacatcc 193
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>gb|AC009393.5| Drosophila melanogaster clone BACR17F05, complete sequence
          Length = 198037

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    aagctgcttccttgacatcc 517
              ||||||||||||||||||||
Sbjct: 125911 aagctgcttccttgacatcc 125892
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>gb|AC126029.3| Mus musculus BAC clone RP23-389K5 from chromosome 19, complete sequence
          Length = 212472

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    cttgggctcaagaagaagat 456
              ||||||||||||||||||||
Sbjct: 165852 cttgggctcaagaagaagat 165871
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>gb|AC124362.3| Mus musculus BAC clone RP24-528N1 from chromosome 13, complete sequence
          Length = 173382

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   gcttgggctcaagaagaaga 455
             ||||||||||||||||||||
Sbjct: 42107 gcttgggctcaagaagaaga 42088
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>emb|AL118512.9|HSG248A21 Human DNA sequence from clone GS1-248A21 on chromosome 1q31.1-31.3
             Contains part of the gene for hemicentin (FIBL-6),
             complete sequence
          Length = 83063

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 207   gctcttccttctcagtttcatatc 230
             ||||||||||||||||||| ||||
Sbjct: 35311 gctcttccttctcagtttcttatc 35288
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>emb|AL662803.11| Mouse DNA sequence from clone RP23-215N10 on chromosome 11 Contains a
              novel gene, complete sequence
          Length = 155034

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     atgacatagaaaagtggcag 68
              ||||||||||||||||||||
Sbjct: 111066 atgacatagaaaagtggcag 111085
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>gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, complete sequence
          Length = 186783

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     agaaaagtggcaggaaacca 75
              ||||||||||||||||||||
Sbjct: 109462 agaaaagtggcaggaaacca 109481
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>ref|NM_141982.2| Drosophila melanogaster CG7242-RA (CG7242), mRNA
          Length = 965

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 498 aagctgcttccttgacatcc 517
           ||||||||||||||||||||
Sbjct: 232 aagctgcttccttgacatcc 213
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>dbj|AK154638.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630101N06
           product:unclassifiable, full insert sequence
          Length = 964

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 437 cttgggctcaagaagaagat 456
           ||||||||||||||||||||
Sbjct: 237 cttgggctcaagaagaagat 256
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>gb|AC092506.3| Homo sapiens chromosome 1 clone RP11-364B6, complete sequence
          Length = 198279

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     tgagtatgtgattcctgtaa 47
              ||||||||||||||||||||
Sbjct: 149998 tgagtatgtgattcctgtaa 150017
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>gb|AC151737.3| Pan troglodytes BAC clone RP43-70B8 from chromosome 7, complete sequence
          Length = 212458

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    tcaagataagcatggcttgt 427
              ||||||||||||||||||||
Sbjct: 201663 tcaagataagcatggcttgt 201682
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>gb|AY051881.1| Drosophila melanogaster LD37196 full insert cDNA
          Length = 966

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 498 aagctgcttccttgacatcc 517
           ||||||||||||||||||||
Sbjct: 219 aagctgcttccttgacatcc 200
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>gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 92710

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    tataagttataattaaattg 29
             ||||||||||||||||||||
Sbjct: 50672 tataagttataattaaattg 50691
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>gb|AF219224.1|AF219224 Drosophila melanogaster clone BDGP LD37196 unknown mRNA, complete
           cds
          Length = 953

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 498 aagctgcttccttgacatcc 517
           ||||||||||||||||||||
Sbjct: 220 aagctgcttccttgacatcc 201
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>gb|AC006145.2|AC006145 Homo sapiens PAC clone RP4-560O14 from 7q21.1-q21.2, complete
            sequence
          Length = 144659

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 408  tcaagataagcatggcttgt 427
            ||||||||||||||||||||
Sbjct: 3582 tcaagataagcatggcttgt 3563
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>gb|AC006230.11|AC006230 Homo sapiens chromosome 4 clone C0287J14 map 4p16, complete sequence
          Length = 166998

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 499    agctgcttccttgacatcct 518
              ||||||||||||||||||||
Sbjct: 153371 agctgcttccttgacatcct 153390
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>gb|AE003698.3| Drosophila melanogaster chromosome 3R, section 36 of 118 of the
             complete sequence
          Length = 247955

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   aagctgcttccttgacatcc 517
             ||||||||||||||||||||
Sbjct: 46025 aagctgcttccttgacatcc 46006
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>gb|AC111082.23| Mus musculus chromosome 17, clone RP23-140I9, complete sequence
          Length = 171550

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   gacaacaagggtaagtaaca 371
             ||||||||||||||||||||
Sbjct: 59753 gacaacaagggtaagtaaca 59772
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>gb|AC140345.3| Mus musculus BAC clone RP24-66E22 from 13, complete sequence
          Length = 238541

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   gcttgggctcaagaagaaga 455
             ||||||||||||||||||||
Sbjct: 14552 gcttgggctcaagaagaaga 14571
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>gb|DQ004855.1| Listeria bacteriophage P100, complete genome
          Length = 131384

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 579   ataaggcacctataaatagt 598
             ||||||||||||||||||||
Sbjct: 98653 ataaggcacctataaatagt 98634
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>gb|AC172863.1| Brassica rapa subsp. pekinensis clone KBrB070M24, complete sequence
          Length = 97697

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     cttatataagttataattaa 25
             ||||||||||||||||||||
Sbjct: 36816 cttatataagttataattaa 36797
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>gb|AC090939.2| Homo sapiens chromosome 3 clone RP11-127I14 map 3p, complete sequence
          Length = 161366

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 195    atggatgatgatgctcttccttct 218
              ||||||||||||||| ||||||||
Sbjct: 106588 atggatgatgatgctattccttct 106611


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,775,808
Number of Sequences: 3902068
Number of extensions: 5775808
Number of successful extensions: 117335
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117131
Number of HSP's gapped (non-prelim): 204
length of query: 646
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 623
effective length of database: 17,143,297,704
effective search space: 10680274469592
effective search space used: 10680274469592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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