Clone Name | rbasd18i16 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK112031.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A09, full insert sequence Length = 1045 Score = 511 bits (258), Expect = e-142 Identities = 381/422 (90%) Strand = Plus / Minus Query: 210 tcatgttctaacagcatcctgacgatccttgaccccggttgccgcccaccacgtccacag 269 |||||||||| ||||| ||||| |||| ||| |||||||||| |||||||| ||||| | Sbjct: 756 tcatgttctagcagcagcctgatgatctttgggcccggttgccacccaccacatccacgg 697 Query: 270 tgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactatacact 329 ||||||||| ||||| |||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 696 tgtccggcacatacagttcttcctctggttcattcttcagagcattctttacaatgcact 637 Query: 330 ggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttcc 389 ||||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||| Sbjct: 636 ggaaagcctcctccacgtttgtaccatccttggcagatgtctcaaagtatgggatattcc 577 Query: 390 ctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccaccat 449 |||||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| | Sbjct: 576 ctttagaggcacaccatgcctttgccttcttctcagagaccacacggctgttgccaccgt 517 Query: 450 ctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggctag 509 |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 516 ctacatcaactttgttgcccaaaagaacaaaagggaagttatcagggtctgatgggcttg 457 Query: 510 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 569 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 456 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 397 Query: 570 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaagactttgaa 629 |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 396 catcataaactagaacacagcaatctgctccacggtagaatgcaacaccaagactctgaa 337 Query: 630 ac 631 || Sbjct: 336 ac 335
>dbj|AK111896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021E23, full insert sequence Length = 1046 Score = 511 bits (258), Expect = e-142 Identities = 381/422 (90%) Strand = Plus / Minus Query: 210 tcatgttctaacagcatcctgacgatccttgaccccggttgccgcccaccacgtccacag 269 |||||||||| ||||| ||||| |||| ||| |||||||||| |||||||| ||||| | Sbjct: 757 tcatgttctagcagcagcctgatgatctttgggcccggttgccacccaccacatccacgg 698 Query: 270 tgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactatacact 329 ||||||||| ||||| |||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 697 tgtccggcacatacagttcttcctctggttcattcttcagagcattctttacaatgcact 638 Query: 330 ggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttcc 389 ||||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||| Sbjct: 637 ggaaagcctcctccacgtttgtaccatccttggcagatgtctcaaagtatgggatattcc 578 Query: 390 ctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccaccat 449 |||||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| | Sbjct: 577 ctttagaggcacaccatgcctttgccttcttctcagagaccacacggctgttgccaccgt 518 Query: 450 ctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggctag 509 |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 517 ctacatcaactttgttgcccaaaagaacaaaagggaagttatcagggtctgatgggcttg 458 Query: 510 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 569 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 457 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 398 Query: 570 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaagactttgaa 629 |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 397 catcataaactagaacacagcaatctgctccacggtagaatgcaacaccaagactctgaa 338 Query: 630 ac 631 || Sbjct: 337 ac 336
>ref|XM_475712.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 621 Score = 498 bits (251), Expect = e-137 Identities = 371/411 (90%) Strand = Plus / Minus Query: 221 cagcatcctgacgatccttgaccccggttgccgcccaccacgtccacagtgtccggcata 280 ||||| ||||| |||| ||| |||||||||| |||||||| ||||| |||||||||| | Sbjct: 617 cagcagcctgatgatctttgggcccggttgccacccaccacatccacggtgtccggcaca 558 Query: 281 tacaattcttcctctggctcattcttcagagcgttctttactatacactggaaagcctcc 340 |||| |||||||||||| |||||||||||||| |||||||| || ||||||||||||||| Sbjct: 557 tacagttcttcctctggttcattcttcagagcattctttacaatgcactggaaagcctcc 498 Query: 341 tccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggca 400 |||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 497 tccacgtttgtaccatccttggcagatgtctcaaagtatgggatattccctttagaggca 438 Query: 401 caccatgccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaact 460 ||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||||||| Sbjct: 437 caccatgcctttgccttcttctcagagaccacacggctgttgccaccgtctacatcaact 378 Query: 461 ttgttacccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattaga 520 ||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 377 ttgttgcccaaaagaacaaaagggaagttatcagggtctgatgggcttgcctgaattaga 318 Query: 521 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 580 || ||||||||||||||||| |||||||||||||| ||||| || || ||||| |||||| Sbjct: 317 aattcttcacgccagttgttaagattatcaaatgacttcatagaattgacatcataaact 258 Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 |||||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 257 agaacacagcaatctgctccacggtagaatgcaacaccaagactctgaaac 207
>gb|AY226827.1| Oryza sativa (indica cultivar-group) small GTP binding protein (Rab7) mRNA, complete cds Length = 1018 Score = 496 bits (250), Expect = e-137 Identities = 379/422 (89%) Strand = Plus / Minus Query: 210 tcatgttctaacagcatcctgacgatccttgaccccggttgccgcccaccacgtccacag 269 |||||||||| ||||| ||||| |||| | | |||||||||| |||||||| ||||| | Sbjct: 693 tcatgttctagcagcagcctgatgatcttggggcccggttgccacccaccacatccacgg 634 Query: 270 tgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactatacact 329 ||||||||| ||||| |||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 633 tgtccggcacatacagttcttcctctggttcattcttcagagcattctttacaatgcact 574 Query: 330 ggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttcc 389 ||||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||| Sbjct: 573 ggaaagcctcctccacgtttgtaccatccttggcagatgtctcaaagtatgggatattcc 514 Query: 390 ctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccaccat 449 |||||||||||||||||||||| ||||| |||||||||||||| || ||||| |||| | Sbjct: 513 ctttagaggcacaccatgcctttgccttcttctcagagaccacacggctgttgccactgt 454 Query: 450 ctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggctag 509 |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 453 ctacatcaactttgttgcccaaaagaacaaaagggaagttatcagggtctgatgggcttg 394 Query: 510 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 569 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 393 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 334 Query: 570 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaagactttgaa 629 |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 333 catcataaactagaacacagcaatctgctccacggtagaatgcaacaccaagactctgaa 274 Query: 630 ac 631 || Sbjct: 273 ac 272
>gb|AY109438.1| Zea mays CL8348_1 mRNA sequence Length = 1232 Score = 458 bits (231), Expect = e-125 Identities = 349/389 (89%) Strand = Plus / Plus Query: 243 cccggttgccgcccaccacgtccacagtgtccggcatatacaattcttcctctggctcat 302 |||||||||| |||||||||||||| || || |||| ||||| ||||||||||||||||| Sbjct: 559 cccggttgccacccaccacgtccacggtatctggcacatacagttcttcctctggctcat 618 Query: 303 tcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatccttgg 362 |||||||||| ||||| || ||||||||||| || || |||||||| |||| ||||| | Sbjct: 619 tcttcagagcattcttcacgatacactggaaggcgtcttccacgttcgttccgtccttag 678 Query: 363 cagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttct 422 |||| ||||||||||| |||||||||||||| || |||||||||||||| |||||| || Sbjct: 679 cagacgtctcaaagtacgggatgttccctttggaagcacaccatgcctttgcctttnnct 738 Query: 423 cagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaag 482 |||| ||||| || |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 739 cagacaccacacggctgttcccaccatctacatcaactttgttacccaacagaacaaaag 798 Query: 483 ggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttgttca 542 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 799 ggaaattatcaggatctgatgggctagcctgaattagaaactcttctcgccagttgttca 858 Query: 543 gattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgctccac 602 | || |||||||||||||| || |||||||| || ||||| ||||||||||| ||||| | Sbjct: 859 ggttgtcaaatgatttcatagaattaacatcatagactaggacacaacaatctgctcccc 918 Query: 603 ggtagaatgcaacaccaagactttgaaac 631 ||||||||||||| |||||||| |||||| Sbjct: 919 ggtagaatgcaacgccaagactctgaaac 947
>gb|BT024015.1| Zea mays clone EL01N0311D12 mRNA sequence Length = 1605 Score = 452 bits (228), Expect = e-124 Identities = 375/424 (88%) Strand = Plus / Minus Query: 208 cctcatgttctaacagcatcctgacgatccttgaccccggttgccgcccaccacgtccac 267 |||||||| |||||||| || || |||| ||| |||||||||| || ||||| ||||| Sbjct: 1329 cctcatgtcttaacagcagccagatgatctctgagcccggttgccacctaccacatccac 1270 Query: 268 agtgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactataca 327 || || |||| ||||||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 1269 ggtatctggcacatacaattcttcctccggttcattcttcagagcattctttacaataca 1210 Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| || || |||||||| |||||||||| ||||| ||||||||||| |||||||| Sbjct: 1209 ctggaaggcatcttccacgttcgttccatccttagcagacgtctcaaagtacgggatgtt 1150 Query: 388 ccctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacc 447 |||||||||||| ||||||||||| ||||||||||| || ||||| || ||||||||||| Sbjct: 1149 ccctttagaggcgcaccatgcctttgcctttttctccgacaccacacggctgttcccacc 1090 Query: 448 atctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggct 507 ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| Sbjct: 1089 atctacatcaactttgttacccaacagaacaaaagggaaattgtcaggatctgatgggct 1030 Query: 508 agcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagtt 567 ||||||||||||||||||||||||||||||| ||||||||||| |||||||| || || Sbjct: 1029 cgcctgaattagaaactcttcacgccagttgtgaagattatcaaacgatttcatagaatt 970 Query: 568 aacatcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaagactttg 627 |||||| || ||||| ||||||||||| ||||| |||||||||||||| |||||||| || Sbjct: 969 aacatcatagactaggacacaacaatctgctccccggtagaatgcaacgccaagactctg 910 Query: 628 aaac 631 |||| Sbjct: 909 aaac 906
>gb|U40219.1|PCU40219 Pennisetum ciliare possible apospory-associated protein mRNA, complete cds Length = 941 Score = 398 bits (201), Expect = e-108 Identities = 339/385 (88%) Strand = Plus / Minus Query: 247 gttgccgcccaccacgtccacagtgtccggcatatacaattcttcctctggctcattctt 306 |||||| |||||||| || |||||||| |||| ||||| |||||| || || ||||| || Sbjct: 684 gttgccacccaccacatcgacagtgtcaggcacatacagttcttcttcaggttcattttt 625 Query: 307 cagagcgttctttactatacactggaaagcctcctccacgttgattccatccttggcaga 366 ||| || |||||||| ||||| || ||||| || ||||| || |||| || |||||||| Sbjct: 624 cagggcattctttacaatacattgaaaagcatcttccacattagttccttctttggcaga 565 Query: 367 agtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttctcaga 426 ||||||||||| || ||||| ||||| ||||||||||| ||||| |||||||||||||| Sbjct: 564 tgtctcaaagtaaggtatgttgcctttcgaggcacaccaagcctttgcctttttctcaga 505 Query: 427 gaccacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaagggaa 486 |||||| || ||||| |||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 504 gaccacacggctgttaccaccatcaacatcaactttgtttccaagcagaacaaaggggaa 445 Query: 487 gttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttgttcagatt 546 |||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 444 gttatcaggatcagatgggctagcctgaataagaaattcttcacgccaattgttcagatt 385 Query: 547 atcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgctccacggta 606 |||||| |||||||| ||||||||||| |||||||||||||||||||| |||||||| || Sbjct: 384 atcaaacgatttcatagagttaacatcataaactagaacacaacaatcagctccacgata 325 Query: 607 gaatgcaacaccaagactttgaaac 631 |||||||||||||||||| |||||| Sbjct: 324 gaatgcaacaccaagactctgaaac 300
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 202 bits (102), Expect = 1e-48 Identities = 138/150 (92%) Strand = Plus / Minus Query: 281 tacaattcttcctctggctcattcttcagagcgttctttactatacactggaaagcctcc 340 |||| |||||||||||| |||||||||||||| |||||||| || ||||||||||||||| Sbjct: 62656 tacagttcttcctctggttcattcttcagagcattctttacaatgcactggaaagcctcc 62597 Query: 341 tccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggca 400 |||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 62596 tccacgtttgtaccatccttggcagatgtctcaaagtatgggatattccctttagaggca 62537 Query: 401 caccatgccttcgcctttttctcagagacc 430 ||||||||||| ||||| |||||||||||| Sbjct: 62536 caccatgcctttgccttcttctcagagacc 62507 Score = 163 bits (82), Expect = 9e-37 Identities = 112/122 (91%) Strand = Plus / Minus Query: 510 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 569 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 62250 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 62191 Query: 570 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaagactttgaa 629 |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 62190 catcataaactagaacacagcaatctgctccacggtagaatgcaacaccaagactctgaa 62131 Query: 630 ac 631 || Sbjct: 62130 ac 62129 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 428 accacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaagggaag 487 ||||| || ||||| ||||| ||||||||||||||||| |||| ||||||||||||||| Sbjct: 62402 accacacggctgttgccaccgtctacatcaactttgttgcccaaaagaacaaaagggaag 62343 Query: 488 ttatcaggatctgatgggctagcctg 513 |||||||| ||||||||||| ||||| Sbjct: 62342 ttatcagggtctgatgggcttgcctg 62317
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 202 bits (102), Expect = 1e-48 Identities = 138/150 (92%) Strand = Plus / Minus Query: 281 tacaattcttcctctggctcattcttcagagcgttctttactatacactggaaagcctcc 340 |||| |||||||||||| |||||||||||||| |||||||| || ||||||||||||||| Sbjct: 25422295 tacagttcttcctctggttcattcttcagagcattctttacaatgcactggaaagcctcc 25422236 Query: 341 tccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggca 400 |||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 25422235 tccacgtttgtaccatccttggcagatgtctcaaagtatgggatattccctttagaggca 25422176 Query: 401 caccatgccttcgcctttttctcagagacc 430 ||||||||||| ||||| |||||||||||| Sbjct: 25422175 caccatgcctttgccttcttctcagagacc 25422146 Score = 163 bits (82), Expect = 9e-37 Identities = 112/122 (91%) Strand = Plus / Minus Query: 510 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 569 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 25421889 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 25421830 Query: 570 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaagactttgaa 629 |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 25421829 catcataaactagaacacagcaatctgctccacggtagaatgcaacaccaagactctgaa 25421770 Query: 630 ac 631 || Sbjct: 25421769 ac 25421768 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 428 accacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaagggaag 487 ||||| || ||||| ||||| ||||||||||||||||| |||| ||||||||||||||| Sbjct: 25422041 accacacggctgttgccaccgtctacatcaactttgttgcccaaaagaacaaaagggaag 25421982 Query: 488 ttatcaggatctgatgggctagcctg 513 |||||||| ||||||||||| ||||| Sbjct: 25421981 ttatcagggtctgatgggcttgcctg 25421956
>gb|DQ235201.1| Solanum tuberosum clone 171F12 unknown mRNA Length = 916 Score = 194 bits (98), Expect = 2e-46 Identities = 251/302 (83%) Strand = Plus / Minus Query: 329 tggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttc 388 |||||||||||||| |||||| |||| ||||| || ||||| |||||||| || ||||| Sbjct: 567 tggaaagcctcctctacgttggttccttccttagctgaagtttcaaagtagggaatgtta 508 Query: 389 cctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacca 448 || || || || ||||| ||| |||||||||||||| ||||| | ||| || |||||| Sbjct: 507 ccctttgaagcgcaccaggcccgagcctttttctcagacaccactctactatttccacca 448 Query: 449 tctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggcta 508 || |||||||||||||| ||||||| ||||| || ||||| || ||||| |||||||| Sbjct: 447 tcaacatcaactttgttccccagcacgacaaatggaaagttttctggatcagatgggctt 388 Query: 509 gcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagtta 568 |||||||||| |||||||| | ||||||||||| || |||||||| ||||| || || Sbjct: 387 gcctgaattaagaactcttctctccagttgttcaagttttcaaatgacttcattgaattt 328 Query: 569 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaagactttga 628 ||||| ||||| || ||||||||||| || || |||||||| |||||||||||||| ||| Sbjct: 327 acatcataaacaaggacacaacaatcagcaccgcggtagaaagcaacaccaagactctga 268 Query: 629 aa 630 || Sbjct: 267 aa 266
>gb|DQ222491.1| Solanum tuberosum clone 099C08 unknown mRNA Length = 967 Score = 194 bits (98), Expect = 2e-46 Identities = 251/302 (83%) Strand = Plus / Minus Query: 329 tggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttc 388 |||||||||||||| |||||| |||| ||||| || ||||| |||||||| || ||||| Sbjct: 576 tggaaagcctcctctacgttggttccttccttagctgaagtttcaaagtagggaatgtta 517 Query: 389 cctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacca 448 || || || || ||||| ||| |||||||||||||| ||||| | ||| || |||||| Sbjct: 516 ccctttgaagcgcaccaggcccgagcctttttctcagacaccactctactatttccacca 457 Query: 449 tctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggcta 508 || |||||||||||||| ||||||| ||||| || ||||| || ||||| |||||||| Sbjct: 456 tcaacatcaactttgttccccagcacgacaaatggaaagttttctggatcagatgggctt 397 Query: 509 gcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagtta 568 |||||||||| |||||||| | ||||||||||| || |||||||| ||||| || || Sbjct: 396 gcctgaattaagaactcttctctccagttgttcaagttttcaaatgacttcattgaattt 337 Query: 569 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaagactttga 628 ||||| ||||| || ||||||||||| || || |||||||| |||||||||||||| ||| Sbjct: 336 acatcataaacaaggacacaacaatcagcaccgcggtagaaagcaacaccaagactctga 277 Query: 629 aa 630 || Sbjct: 276 aa 275
>gb|BT013071.1| Lycopersicon esculentum clone 114328R, mRNA sequence Length = 1042 Score = 194 bits (98), Expect = 2e-46 Identities = 251/302 (83%) Strand = Plus / Minus Query: 329 tggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttc 388 |||||||||||||| |||||| |||| ||||| || ||||| |||||||| || ||||| Sbjct: 625 tggaaagcctcctctacgttggttccttccttagctgaagtttcaaagtagggaatgtta 566 Query: 389 cctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacca 448 || || || || ||||| ||| |||||||||||||| ||||| | ||| || |||||| Sbjct: 565 ccctttgaagcgcaccaggcccgagcctttttctcagacaccactctactatttccacca 506 Query: 449 tctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggcta 508 || |||||||||||||| ||||||| ||||| |||||||| || ||||| |||||||| Sbjct: 505 tcaacatcaactttgttccccagcacgacaaatgggaagttctctggatcagatgggctt 446 Query: 509 gcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagtta 568 |||||||||| |||||||| | ||||||||||| || |||||||| ||||| || || Sbjct: 445 gcctgaattaagaactcttctctccagttgttcaagttttcaaatgacttcattgaattt 386 Query: 569 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaagactttga 628 ||||| ||||| || ||||||||||| || || ||||| || |||||||||||||| ||| Sbjct: 385 acatcataaacaaggacacaacaatcagcaccgcggtaaaaagcaacaccaagactctga 326 Query: 629 aa 630 || Sbjct: 325 aa 324
>ref|NM_104107.2| Arabidopsis thaliana GTP binding AT1G52280 mRNA, complete cds Length = 939 Score = 174 bits (88), Expect = 2e-40 Identities = 226/272 (83%) Strand = Plus / Minus Query: 359 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 418 ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 616 ttggcggaagtctcaaagtaaggaatgtttcctttagatgcacaccatgcctttgccttt 557 Query: 419 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 478 |||||||| ||||| | || || |||||||| |||||| ||||| |||| || |||| Sbjct: 556 ttctcagaaaccactctgctctttccaccatcaacatcagtcttgttccccaacacaaca 497 Query: 479 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 538 || || ||||| ||||||||||| || ||||||||||| | |||||||| | |||||| Sbjct: 496 aatggaaagttttcaggatctgaaggactagcctgaatcaagaactcttccctccagtta 437 Query: 539 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 598 || ||||||||||| |||||||| || ||||| || || |||||||||||||||||| Sbjct: 436 ttaagattatcaaaagatttcataacattgacatcatagacaagaacacaacaatccgct 377 Query: 599 ccacggtagaatgcaacaccaagactttgaaa 630 || ||||| || ||||| || | ||||||||| Sbjct: 376 cctcggtaaaacgcaactcccaaactttgaaa 345
>gb|AY096407.1| Arabidopsis thaliana putative GTP-binding protein RAB7D (At1g52280) mRNA, complete cds Length = 652 Score = 174 bits (88), Expect = 2e-40 Identities = 226/272 (83%) Strand = Plus / Minus Query: 359 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 418 ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 479 ttggcggaagtctcaaagtaaggaatgtttcctttagatgcacaccatgcctttgccttt 420 Query: 419 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 478 |||||||| ||||| | || || |||||||| |||||| ||||| |||| || |||| Sbjct: 419 ttctcagaaaccactctgctctttccaccatcaacatcagtcttgttccccaacacaaca 360 Query: 479 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 538 || || ||||| ||||||||||| || ||||||||||| | |||||||| | |||||| Sbjct: 359 aatggaaagttttcaggatctgaaggactagcctgaatcaagaactcttccctccagtta 300 Query: 539 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 598 || ||||||||||| |||||||| || ||||| || || |||||||||||||||||| Sbjct: 299 ttaagattatcaaaagatttcataacattgacatcatagacaagaacacaacaatccgct 240 Query: 599 ccacggtagaatgcaacaccaagactttgaaa 630 || ||||| || ||||| || | ||||||||| Sbjct: 239 cctcggtaaaacgcaactcccaaactttgaaa 208
>gb|AY074361.1| Arabidopsis thaliana putative GTP-binding protein RAB7D (At1g52280) mRNA, complete cds Length = 894 Score = 174 bits (88), Expect = 2e-40 Identities = 226/272 (83%) Strand = Plus / Minus Query: 359 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 418 ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 616 ttggcggaagtctcaaagtaaggaatgtttcctttagatgcacaccatgcctttgccttt 557 Query: 419 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 478 |||||||| ||||| | || || |||||||| |||||| ||||| |||| || |||| Sbjct: 556 ttctcagaaaccactctgctctttccaccatcaacatcagtcttgttccccaacacaaca 497 Query: 479 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 538 || || ||||| ||||||||||| || ||||||||||| | |||||||| | |||||| Sbjct: 496 aatggaaagttttcaggatctgaaggactagcctgaatcaagaactcttccctccagtta 437 Query: 539 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 598 || ||||||||||| |||||||| || ||||| || || |||||||||||||||||| Sbjct: 436 ttaagattatcaaaagatttcataacattgacatcatagacaagaacacaacaatccgct 377 Query: 599 ccacggtagaatgcaacaccaagactttgaaa 630 || ||||| || ||||| || | ||||||||| Sbjct: 376 cctcggtaaaacgcaactcccaaactttgaaa 345
>dbj|AB071847.1| Arabidopsis thaliana mRNA for AtRab72, complete cds Length = 621 Score = 168 bits (85), Expect = 1e-38 Identities = 232/281 (82%) Strand = Plus / Minus Query: 326 cactggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatg 385 |||| ||||||| | || || |||| ||| || ||||| |||||||||||||| || ||| Sbjct: 512 cactcgaaagccgcatctacattgaatccttctttggcggaagtctcaaagtaaggaatg 453 Query: 386 ttccctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttccca 445 || |||||||| |||||||||||||| |||||||||||||| ||||| | || || ||| Sbjct: 452 tttcctttagatgcacaccatgcctttgcctttttctcagaaaccactctgctcttgcca 393 Query: 446 ccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatggg 505 || || |||||| ||||| |||| || |||||| || ||||| |||||||||||||| Sbjct: 392 ccgtcaacatcagtcttgttccccaacacaacaaacggaaagttttcaggatctgatgga 333 Query: 506 ctagcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggag 565 ||||||||||| | |||||||| | |||||| || ||||||||||| |||||||| Sbjct: 332 ctagcctgaatcaagaactcttccctccagttattaagattatcaaaagatttcataaca 273 Query: 566 ttaacatcgtaaactagaacacaacaatccgctccacggta 606 || ||||| || || |||||||||||||||||||| ||||| Sbjct: 272 ttgacatcatacacaagaacacaacaatccgctcctcggta 232
>gb|U82219.1|PAU82219 Prunus armeniaca Rab7 GTP binding protein mRNA, complete cds Length = 987 Score = 165 bits (83), Expect = 2e-37 Identities = 254/311 (81%) Strand = Plus / Minus Query: 321 ctatacactggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatg 380 ||||||||||||| || || ||||| || | || || || ||||| ||||||||||||| Sbjct: 611 ctatacactggaaggcatcatccacattaaagccctcttttgcagaggtctcaaagtatg 552 Query: 381 ggatgttccctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgt 440 | ||||| || || || |||||||| ||||| || || || ||||| ||||| ||||| | Sbjct: 551 gtatgtttcccttggaagcacaccaggcctttgctttcttttcagaaaccactcgactat 492 Query: 441 tcccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctg 500 | |||||||| ||||||| ||||| |||| || ||||| |||||||| ||||| |||| Sbjct: 491 ttccaccatcaacatcaatcttgttccccaacacgacaaatgggaagttttcagggtctg 432 Query: 501 atgggctagcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttca 560 |||| | |||||||| ||||| ||||| | ||||||||| ||||| ||||||||||||| Sbjct: 431 atggagtggcctgaatcagaaattcttccctccagttgttaagattttcaaatgatttca 372 Query: 561 tggagttaacatcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaa 620 || || ||||| || || |||||||| ||||| || ||||| ||||| || ||||||| Sbjct: 371 tgacattcacatcatacacaagaacacagcaatctgcaccacgatagaaagccacaccaa 312 Query: 621 gactttgaaac 631 ||||||||||| Sbjct: 311 gactttgaaac 301
>gb|AF116243.1|AF116243 Gossypium hirsutum RAS-related GTP-binding protein (Rab7) mRNA, complete cds Length = 1049 Score = 163 bits (82), Expect = 9e-37 Identities = 223/270 (82%) Strand = Plus / Minus Query: 362 gcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttc 421 ||||| ||||||||||| || ||||| ||||| || |||||||||||||| || || ||| Sbjct: 555 gcagaggtctcaaagtaaggtatgtttccttttgaagcacaccatgcctttgctttcttc 496 Query: 422 tcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaa 481 ||||| |||||||||||||| ||||| || |||||||| ||||| |||| || |||||| Sbjct: 495 tcagaaaccacgcgactgttaccaccgtcaacatcaaccttgtttcccaacacaacaaat 436 Query: 482 gggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttgttc 541 || ||||| ||||| || || || || |||||||| ||||||||||| ||||||||||| Sbjct: 435 ggaaagttttcagggtcagacggactcgcctgaatcagaaactcttctcgccagttgtta 376 Query: 542 agattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgctcca 601 ||||||||||| || |||||| |||||||| | || || ||||| ||||| || || Sbjct: 375 agattatcaaaggacttcatgacattaacatcatgcacaagtacacagcaatcagcaccc 316 Query: 602 cggtagaatgcaacaccaagactttgaaac 631 || ||||| || ||||| | |||||||||| Sbjct: 315 cgatagaaagccacacctaaactttgaaac 286
>ref|NM_112768.1| Arabidopsis thaliana GTP binding AT3G18820 mRNA, complete cds Length = 1027 Score = 157 bits (79), Expect = 5e-35 Identities = 226/275 (82%) Strand = Plus / Minus Query: 357 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 416 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 646 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 587 Query: 417 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 476 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 586 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 527 Query: 477 caaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagt 536 |||| || || || || ||||||||||| || ||||| || ||||| ||||| | ||||| Sbjct: 526 caaatggaaaattctctggatctgatggactcgcctggatcagaaattcttccctccagt 467 Query: 537 tgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccg 596 |||||||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 466 tgttcagattttcaaatgatttcatggaattgacatcatatacaagaacacagcaatcag 407 Query: 597 ctccacggtagaatgcaacaccaagactttgaaac 631 | |||||||| || || |||||||| || |||||| Sbjct: 406 caccacggtaaaaggctacaccaaggctctgaaac 372
>gb|AY059072.1| Arabidopsis thaliana putative GTP binding protein (At3g18820) mRNA, complete cds Length = 652 Score = 157 bits (79), Expect = 5e-35 Identities = 226/275 (82%) Strand = Plus / Minus Query: 357 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 416 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 481 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 422 Query: 417 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 476 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 421 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 362 Query: 477 caaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagt 536 |||| || || || || ||||||||||| || ||||| || ||||| ||||| | ||||| Sbjct: 361 caaatggaaaattctctggatctgatggactcgcctggatcagaaattcttccctccagt 302 Query: 537 tgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccg 596 |||||||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 301 tgttcagattttcaaatgatttcatggaattgacatcatatacaagaacacagcaatcag 242 Query: 597 ctccacggtagaatgcaacaccaagactttgaaac 631 | |||||||| || || |||||||| || |||||| Sbjct: 241 caccacggtaaaaggctacaccaaggctctgaaac 207
>gb|AY035137.1| Arabidopsis thaliana putative GTP binding protein (At3g18820) mRNA, complete cds Length = 857 Score = 157 bits (79), Expect = 5e-35 Identities = 226/275 (82%) Strand = Plus / Minus Query: 357 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 416 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 568 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 509 Query: 417 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 476 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 508 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 449 Query: 477 caaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagt 536 |||| || || || || ||||||||||| || ||||| || ||||| ||||| | ||||| Sbjct: 448 caaatggaaaattctctggatctgatggactcgcctggatcagaaattcttccctccagt 389 Query: 537 tgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccg 596 |||||||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 388 tgttcagattttcaaatgatttcatggaattgacatcatatacaagaacacagcaatcag 329 Query: 597 ctccacggtagaatgcaacaccaagactttgaaac 631 | |||||||| || || |||||||| || |||||| Sbjct: 328 caccacggtaaaaggctacaccaaggctctgaaac 294
>dbj|AB071846.1| Arabidopsis thaliana mRNA for AtRab71, complete cds Length = 621 Score = 157 bits (79), Expect = 5e-35 Identities = 226/275 (82%) Strand = Plus / Minus Query: 357 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 416 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 481 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 422 Query: 417 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 476 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 421 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 362 Query: 477 caaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagt 536 |||| || || || || ||||||||||| || ||||| || ||||| ||||| | ||||| Sbjct: 361 caaatggaaaattctctggatctgatggactcgcctggatcagaaattcttccctccagt 302 Query: 537 tgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccg 596 |||||||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 301 tgttcagattttcaaatgatttcatggaattgacatcatatacaagaacacagcaatcag 242 Query: 597 ctccacggtagaatgcaacaccaagactttgaaac 631 | |||||||| || || |||||||| || |||||| Sbjct: 241 caccacggtaaaaggctacaccaaggctctgaaac 207
>emb|BX823072.1|CNS0A63E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB87ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 807 Score = 149 bits (75), Expect = 1e-32 Identities = 225/275 (81%) Strand = Plus / Minus Query: 357 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 416 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 429 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 370 Query: 417 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 476 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 369 ttttctctgaaaccactctgctgtttccatcatccacgtcaacgttgtttccgataagaa 310 Query: 477 caaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagt 536 |||| || || || || ||||||||||| || ||||| || ||||| ||||| | ||||| Sbjct: 309 caaatggaaaattctctggatctgatggactcgcctggatcagaaattcttccctccagt 250 Query: 537 tgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccg 596 |||||||||| ||||||||||||||||| || ||||| || || |||||||| |||| | Sbjct: 249 tgttcagattttcaaatgatttcatggaattgacatcatatacaagaacacagcaatgag 190 Query: 597 ctccacggtagaatgcaacaccaagactttgaaac 631 | |||||||| || || |||||||| || |||||| Sbjct: 189 caccacggtaaaaggctacaccaaggctctgaaac 155
>gb|L29275.1|TOBNTRAH Nicotiana tabacum SR1 Nt-rab7b mRNA, complete cds Length = 1563 Score = 149 bits (75), Expect = 1e-32 Identities = 225/275 (81%) Strand = Plus / Minus Query: 356 tccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcc 415 |||||||| |||||||||||||| || ||||| || || || || ||||| || ||| Sbjct: 527 tccttggctgaagtctcaaagtagggaatgttaccctttgaagcgcaccaggctcgagcc 468 Query: 416 tttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcaga 475 |||||||| || ||||| | |||||| |||||||| | |||||||||||| ||||||| | Sbjct: 467 tttttctccgacaccactctactgtttccaccatcaatatcaactttgttccccagcaca 408 Query: 476 acaaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccag 535 ||||| || || || || ||||| || ||||| |||||||||||||||||||| | ||| Sbjct: 407 acaaatggaaaattttctggatccgacgggcttgcctgaattagaaactcttctctccaa 348 Query: 536 ttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatcc 595 ||||| | || |||||||| ||||| || || ||||| || || || || || ||||| Sbjct: 347 ttgtttaagttttcaaatgacttcattgaatttacatcatacacaaggacgcagcaatca 288 Query: 596 gctccacggtagaatgcaacaccaagactttgaaa 630 || || ||||||||||||||||||||||||||||| Sbjct: 287 gcaccgcggtagaatgcaacaccaagactttgaaa 253
>gb|AY084266.1| Arabidopsis thaliana clone 101693 mRNA, complete sequence Length = 1022 Score = 141 bits (71), Expect = 3e-30 Identities = 224/275 (81%) Strand = Plus / Minus Query: 357 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 416 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 640 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 581 Query: 417 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 476 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 580 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 521 Query: 477 caaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagt 536 |||| || || || || ||||||||||| || ||||| || ||||| ||||| | || || Sbjct: 520 caaatggaaaattctctggatctgatggactcgcctggatcagaaattcttccctcctgt 461 Query: 537 tgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccg 596 |||| ||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 460 tgttaagattttcaaatgatttcatggaattgacatcatatacaagaacacagcaatcag 401 Query: 597 ctccacggtagaatgcaacaccaagactttgaaac 631 | |||||||| || || |||||||| || |||||| Sbjct: 400 caccacggtaaaaggctacaccaaggctctgaaac 366
>gb|L29274.1|TOBNTRAG Nicotiana tabacum SR1 Nt-rab7a mRNA, complete cds Length = 989 Score = 137 bits (69), Expect = 5e-29 Identities = 264/329 (80%) Strand = Plus / Minus Query: 299 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 358 ||||| |||||||| || || |||||||||||||||| | ||||| |||| ||| || Sbjct: 636 tcatttttcagagcatttttggctatacactggaaagctgcatccacattgaatccctct 577 Query: 359 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 418 || || || |||||||| ||||| ||||| || || || |||||||||||||| | || Sbjct: 576 tttgccgaggtctcaaaatatggtatgtttcccttggaagcacaccatgcctttactttc 517 Query: 419 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 478 |||||||||||||| |||||||| |||||||| ||||| | || || ||||| | | | Sbjct: 516 ttctcagagaccactcgactgttgccaccatcaacatctatcttattccccagtacgata 457 Query: 479 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 538 || || ||||| || ||||| |||||||| ||||| |||| ||| ||||| | ||||||| Sbjct: 456 aatggaaagttctcgggatcagatgggcttgcctggattaaaaattcttccctccagttg 397 Query: 539 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 598 || ||||| |||||||| ||||| || |||| || ||||||||||||||||| ||| Sbjct: 396 ttaagattctcaaatgacttcataacattcacataatatactagaacacaacaatctgct 337 Query: 599 ccacggtagaatgcaacaccaagactttg 627 |||||||| || || ||||| || ||||| Sbjct: 336 ccacggtaaaaagctacacccaggctttg 308
>emb|Z73943.1|LJRAB7D L.japonicus mRNA for small GTP-binding protein, RAB7D Length = 1058 Score = 125 bits (63), Expect = 2e-25 Identities = 273/343 (79%) Strand = Plus / Minus Query: 280 atacaattcttcctctggctcattcttcagagcgttctttactatacactggaaagcctc 339 ||||| |||||| ||||| |||||||| || || || ||| ||||||| |||||||| | Sbjct: 636 atacatttcttcttctggttcattcttgagtgcattttttgctatacattggaaagcagc 577 Query: 340 ctccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggc 399 || || |||| ||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 576 ttcaacattgaatccttcttttgcagaggtctcgaagtatggtatgtttccctttgaagc 517 Query: 400 acaccatgccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaac 459 |||||||||||| || || |||||||| | || || || ||||||||||| ||||| | Sbjct: 516 acaccatgcctttgctttcttctcagaaataactcggctattcccaccatcaacatctat 457 Query: 460 tttgttacccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattag 519 |||||| |||| | |||||| |||||||| ||||| || ||||| |||||||| || || Sbjct: 456 tttgtttcccaagacaacaaatgggaagttttcagggtcagatggactagcctggataag 397 Query: 520 aaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaac 579 ||| ||||| ||||| | ||| || || ||||| ||||||||| || ||||| ||||| Sbjct: 396 aaattcttctcgccaatggttgaggttgtcaaaagatttcatgacatttacatcataaac 337 Query: 580 tagaacacaacaatccgctccacggtagaatgcaacaccaaga 622 || ||||| || ||||| || || ||||| || ||||||||| Sbjct: 336 aaggacacagcagtccgcaccccgatagaaagccacaccaaga 294
>gb|AY365246.1| Cucumis sativus putative GTP-binding protein (Rab7b) mRNA, complete cds Length = 1008 Score = 121 bits (61), Expect = 3e-24 Identities = 217/269 (80%) Strand = Plus / Minus Query: 359 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 418 ||||||||||| |||||||| ||||| |||||||| || |||||||| || |||||| Sbjct: 515 ttggcagaagtttcaaagtacgggatattcccttttgatgcacaccaagctcgtgccttt 456 Query: 419 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 478 ||||| || || || | |||||| || ||||| ||||||||||| || || | | |||| Sbjct: 455 ttctctgaaacaactctactgtttccgccatcaacatcaactttatttcctaaaacaaca 396 Query: 479 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 538 ||||| || || || ||||| || ||||| ||||| || || || ||||| ||||||||| Sbjct: 395 aaaggaaaattttccggatcggaagggcttgcctggataaggaattcttcccgccagttg 336 Query: 539 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 598 || ||||| |||||||||||||| || || ||||| || || ||||| || ||||| || Sbjct: 335 ttaagattgtcaaatgatttcattgaattgacatcatacaccagaacgcagcaatcagca 276 Query: 599 ccacggtagaatgcaacaccaagactttg 627 || || || || ||||||||||||||||| Sbjct: 275 cctcgataaaaagcaacaccaagactttg 247
>dbj|AK070320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052D24, full insert sequence Length = 1188 Score = 111 bits (56), Expect = 3e-21 Identities = 263/332 (79%) Strand = Plus / Minus Query: 299 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 358 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 658 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 599 Query: 359 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 418 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 598 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 539 Query: 419 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 478 |||||||| || || || || |||||||| ||||||| |||||| || || | |||| Sbjct: 538 ttctcagaaacagtccggctattaccaccatcaacatcaattttgtttccaagtacaaca 479 Query: 479 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 538 |||||||| || || ||||||||||||||||| |||||||| || || ||||||||| || Sbjct: 478 aaagggaaattctctggatctgatgggctagcttgaattaggaattcctcacgccagctg 419 Query: 539 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 598 || || | |||||||| || | || ||||| || || |||||||| || || ||| Sbjct: 418 ttgagcctttcaaatgacttggtaacattgacatcatatacaagaacacagcagtcagct 359 Query: 599 ccacggtagaatgcaacaccaagactttgaaa 630 || ||||| ||||| ||||||||||| ||||| Sbjct: 358 ccccggtaaaatgccacaccaagactctgaaa 327
>dbj|AK059958.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E06, full insert sequence Length = 1178 Score = 111 bits (56), Expect = 3e-21 Identities = 263/332 (79%) Strand = Plus / Minus Query: 299 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 358 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 646 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 587 Query: 359 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 418 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 586 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 527 Query: 419 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 478 |||||||| || || || || |||||||| ||||||| |||||| || || | |||| Sbjct: 526 ttctcagaaacagtccggctattaccaccatcaacatcaattttgtttccaagtacaaca 467 Query: 479 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 538 |||||||| || || ||||||||||||||||| |||||||| || || ||||||||| || Sbjct: 466 aaagggaaattctctggatctgatgggctagcttgaattaggaattcctcacgccagctg 407 Query: 539 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 598 || || | |||||||| || | || ||||| || || |||||||| || || ||| Sbjct: 406 ttgagcctttcaaatgacttggtaacattgacatcatatacaagaacacagcagtcagct 347 Query: 599 ccacggtagaatgcaacaccaagactttgaaa 630 || ||||| ||||| ||||||||||| ||||| Sbjct: 346 ccccggtaaaatgccacaccaagactctgaaa 315
>dbj|AB024995.1| Cicer arietinum mRNA for rab-type small GTP-binding protein, partial cds Length = 578 Score = 107 bits (54), Expect = 4e-20 Identities = 234/294 (79%) Strand = Plus / Minus Query: 269 gtgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactatacac 328 ||||| |||| ||||| |||||| || || |||||||| || || || ||| |||||||| Sbjct: 306 gtgtcaggcagatacatttcttcttcaggttcattcttgagtgcattttttgctatacac 247 Query: 329 tggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttc 388 |||||||| | || || || | ||| || || ||||| |||||||||||||| ||||| Sbjct: 246 tggaaagcagcttcaacattaaatccttcttttgcagatgtctcaaagtatggtatgttt 187 Query: 389 cctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacca 448 || || || |||||||||||||| || || |||||||| | || | || || |||||| Sbjct: 186 ccctttgaagcacaccatgcctttgctttcttctcagaaataactctgctatttccacca 127 Query: 449 tctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggcta 508 || ||||| | |||||| |||| | ||||||||| ||||| ||||| || ||||| ||| Sbjct: 126 tcaacatcgattttgtttcccaagacaacaaaaggaaagttttcagggtcagatggacta 67 Query: 509 gcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatg 562 |||||||| ||||| ||||| | ||| | ||| || || ||||| ||||||||| Sbjct: 66 gcctgaatgagaaattcttctctccaatggttaaggttttcaaaagatttcatg 13
>gb|AY108223.1| Zea mays PCO119199 mRNA sequence Length = 1158 Score = 103 bits (52), Expect = 7e-19 Identities = 211/264 (79%) Strand = Plus / Minus Query: 368 gtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttctcagag 427 ||||||||||| |||||||| || || || ||||||||||| || ||||| |||||||| Sbjct: 609 gtctcaaagtaggggatgtttccctttgaagcacaccatgctttagccttcttctcagaa 550 Query: 428 accacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaagggaag 487 || || ||||| |||||||| ||||| | |||||||| |||| |||||| ||||| Sbjct: 549 acagtccggctgttaccaccatcaacatcgatcttgttaccaagcacaacaaatgggaaa 490 Query: 488 ttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttgttcagatta 547 || || || ||||||||||| || |||||||| || || |||||||||||||| || || Sbjct: 489 ttctctgggtctgatgggctggcttgaattaggaattcctcacgccagttgttgagcttt 430 Query: 548 tcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgctccacggtag 607 |||||||| || ||| ||||| || || |||||||| || || ||||| | || Sbjct: 429 tcaaatgacttggatacgttgacatcatatacaagaacacagcagtcagctcccctataa 370 Query: 608 aatgcaacaccaagactttgaaac 631 ||||| |||||||||||||||||| Sbjct: 369 aatgccacaccaagactttgaaac 346
>ref|NM_112480.2| Arabidopsis thaliana GTP binding AT3G16100 mRNA, complete cds Length = 940 Score = 97.6 bits (49), Expect = 4e-17 Identities = 223/281 (79%) Strand = Plus / Minus Query: 347 ttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccat 406 |||| |||||| ||||| |||||||| ||||| || ||||| || || || |||||||| Sbjct: 589 ttgactccatctttggccgaagtctcgaagtaaggaatgtttcccttggatgcacaccaa 530 Query: 407 gccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaactttgtta 466 | || || || ||||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 529 gattttgctttcttctcagtaaccactcgactctttccaccgtcaacatctgtcttgttc 470 Query: 467 cccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactct 526 |||| | ||| || |||||||| ||||||||||| || |||||||| || || |||||| Sbjct: 469 cccaagacaacgaaggggaagttttcaggatctgaaggactagcctggatcaggaactct 410 Query: 527 tcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaaca 586 || | ||||||||| ||||| ||||| |||||||| || ||||| | || |||||| Sbjct: 409 tccctccagttgttaagattttcaaaggatttcataacattgacatcattcacaagaaca 350 Query: 587 caacaatccgctccacggtagaatgcaacaccaagactttg 627 ||||| |||||||| |||||||| |||||||| | |||||| Sbjct: 349 caacagtccgctcctcggtagaaagcaacacccaaactttg 309
>gb|BT006376.1| Arabidopsis thaliana At3g16100 gene, complete cds Length = 621 Score = 97.6 bits (49), Expect = 4e-17 Identities = 223/281 (79%) Strand = Plus / Minus Query: 347 ttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccat 406 |||| |||||| ||||| |||||||| ||||| || ||||| || || || |||||||| Sbjct: 491 ttgactccatctttggccgaagtctcgaagtaaggaatgtttcccttggatgcacaccaa 432 Query: 407 gccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaactttgtta 466 | || || || ||||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 431 gattttgctttcttctcagtaaccactcgactctttccaccgtcaacatctgtcttgttc 372 Query: 467 cccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactct 526 |||| | ||| || |||||||| ||||||||||| || |||||||| || || |||||| Sbjct: 371 cccaagacaacgaaggggaagttttcaggatctgaaggactagcctggatcaggaactct 312 Query: 527 tcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaaca 586 || | ||||||||| ||||| ||||| |||||||| || ||||| | || |||||| Sbjct: 311 tccctccagttgttaagattttcaaaggatttcataacattgacatcattcacaagaaca 252 Query: 587 caacaatccgctccacggtagaatgcaacaccaagactttg 627 ||||| |||||||| |||||||| |||||||| | |||||| Sbjct: 251 caacagtccgctcctcggtagaaagcaacacccaaactttg 211
>gb|AY084691.1| Arabidopsis thaliana clone 115178 mRNA, complete sequence Length = 896 Score = 97.6 bits (49), Expect = 4e-17 Identities = 223/281 (79%) Strand = Plus / Minus Query: 347 ttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccat 406 |||| |||||| ||||| |||||||| ||||| || ||||| || || || |||||||| Sbjct: 593 ttgactccatctttggccgaagtctcgaagtaaggaatgtttcccttggatgcacaccaa 534 Query: 407 gccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaactttgtta 466 | || || || ||||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 533 gattttgctttcttctcagtaaccactcgactctttccaccgtcaacatctgtcttgttc 474 Query: 467 cccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactct 526 |||| | ||| || |||||||| ||||||||||| || |||||||| || || |||||| Sbjct: 473 cccaagacaacgaaggggaagttttcaggatctgaaggactagcctggatcaggaactct 414 Query: 527 tcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaaca 586 || | ||||||||| ||||| ||||| |||||||| || ||||| | || |||||| Sbjct: 413 tccctccagttgttaagattttcaaaggatttcataacattgacatcattcacaagaaca 354 Query: 587 caacaatccgctccacggtagaatgcaacaccaagactttg 627 ||||| |||||||| |||||||| |||||||| | |||||| Sbjct: 353 caacagtccgctcctcggtagaaagcaacacccaaactttg 313
>dbj|AB071848.1| Arabidopsis thaliana mRNA for AtRab73, complete cds Length = 621 Score = 97.6 bits (49), Expect = 4e-17 Identities = 223/281 (79%) Strand = Plus / Minus Query: 347 ttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccat 406 |||| |||||| ||||| |||||||| ||||| || ||||| || || || |||||||| Sbjct: 491 ttgactccatctttggccgaagtctcgaagtaaggaatgtttcccttggatgcacaccaa 432 Query: 407 gccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaactttgtta 466 | || || || ||||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 431 gattttgctttcttctcagtaaccactcgactctttccaccgtcaacatctgtcttgttc 372 Query: 467 cccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactct 526 |||| | ||| || |||||||| ||||||||||| || |||||||| || || |||||| Sbjct: 371 cccaagacaacgaaggggaagttttcaggatctgaaggactagcctggatcaggaactct 312 Query: 527 tcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaaca 586 || | ||||||||| ||||| ||||| |||||||| || ||||| | || |||||| Sbjct: 311 tccctccagttgttaagattttcaaaggatttcataacattgacatcattcacaagaaca 252 Query: 587 caacaatccgctccacggtagaatgcaacaccaagactttg 627 ||||| |||||||| |||||||| |||||||| | |||||| Sbjct: 251 caacagtccgctcctcggtagaaagcaacacccaaactttg 211
>ref|NM_188576.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 654 Score = 95.6 bits (48), Expect = 2e-16 Identities = 261/332 (78%) Strand = Plus / Minus Query: 299 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 358 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 539 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 480 Query: 359 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 418 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 479 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 420 Query: 419 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 478 |||||| || || || || |||||||| ||||||| |||||| || || | |||| Sbjct: 419 ttctcactcacagtccggctattaccaccatcaacatcaattttgtttccaagtacaaca 360 Query: 479 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 538 |||||||| || || ||||||||||||||||| |||||||| || || ||||||||| || Sbjct: 359 aaagggaaattctctggatctgatgggctagcttgaattaggaattcctcacgccagctg 300 Query: 539 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 598 || || | |||||||| || | || ||||| || || |||||||| || || ||| Sbjct: 299 ttgagcctttcaaatgacttggtaacattgacatcatatacaagaacacagcagtcagct 240 Query: 599 ccacggtagaatgcaacaccaagactttgaaa 630 || ||||| ||||| ||||||||||| ||||| Sbjct: 239 ccccggtaaaatgccacaccaagactctgaaa 208
>dbj|AB026654.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MVE11 Length = 75508 Score = 91.7 bits (46), Expect = 3e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 518 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 577 ||||| ||||| | ||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 69266 agaaattcttccctccagttgttcagattttcaaatgatttcatggaattgacatcatat 69207 Query: 578 actagaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 || |||||||| ||||| || |||||||| || || |||||||| || |||||| Sbjct: 69206 acaagaacacagcaatcagcaccacggtaaaaggctacaccaaggctctgaaac 69153 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 357 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 416 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 69610 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 69551 Query: 417 ttttctc 423 ||||||| Sbjct: 69550 ttttctc 69544
>emb|Z73942.1|LJRAB7C L.japonicus mRNA for small GTP-binding protein, RAB7C Length = 1022 Score = 89.7 bits (45), Expect = 1e-14 Identities = 204/257 (79%) Strand = Plus / Minus Query: 359 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 418 |||||||| |||||||| || ||||| || ||||| || |||||||| || ||||| Sbjct: 566 ttggcagatgtctcaaaataagggatatttccttttgatgcacaccaagcacgagccttc 507 Query: 419 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 478 || || || ||||| | ||||||||||||||| | ||| | ||||| || | | |||| Sbjct: 506 ttttctgaaaccactctactgttcccaccatcaatatctatcttgtttcctataacaaca 447 Query: 479 aaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgccagttg 538 ||||| || || || ||||| || || ||||| ||||| ||||| ||||| | ||||||| Sbjct: 446 aaaggaaaattctctggatcggaaggactagcttgaatgagaaattcttccctccagttg 387 Query: 539 ttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatccgct 598 || || || |||||||||||||| || |||||||| || || |||||||| ||||| || Sbjct: 386 ttaaggttgtcaaatgatttcattgaattaacatcatatacaagaacacagcaatcagca 327 Query: 599 ccacggtagaatgcaac 615 ||||| ||||| ||||| Sbjct: 326 ccacgatagaaagcaac 310
>gb|AC037424.10|AC037424 Arabidopsis thaliana chromosome 1 BAC F19K6 genomic sequence, complete sequence Length = 75948 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 359 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 418 ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 64675 ttggcggaagtctcaaagtaaggaatgtttcctttagatgcacaccatgcctttgccttt 64616 Query: 419 ttctcaga 426 |||||||| Sbjct: 64615 ttctcaga 64608 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 521 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 580 |||||||| | |||||| || ||||||||||| |||||||| || ||||| || || Sbjct: 64334 aactcttccctccagttattaagattatcaaaagatttcataacattgacatcatagaca 64275 Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaa 630 |||||||||||||||||||| ||||| || ||||| || | ||||||||| Sbjct: 64274 agaacacaacaatccgctcctcggtaaaacgcaactcccaaactttgaaa 64225 Score = 44.1 bits (22), Expect = 0.55 Identities = 58/70 (82%) Strand = Plus / Minus Query: 443 ccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgat 502 |||||||| |||||| ||||| |||| || |||||| || ||||| ||||||||||| Sbjct: 64513 ccaccatcaacatcagtcttgttccccaacacaacaaatggaaagttttcaggatctgaa 64454 Query: 503 gggctagcct 512 || ||||||| Sbjct: 64453 ggactagcct 64444
>gb|U87142.1|MCU87142 Mesembryanthemum crystallinum Nt-rab7a homolog mRNA, complete cds Length = 999 Score = 87.7 bits (44), Expect = 4e-14 Identities = 185/232 (79%) Strand = Plus / Minus Query: 400 acaccatgccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaac 459 ||||||||| || ||||||||||| || ||||| | | | | |||||||| ||||| | Sbjct: 525 acaccatgcttttgcctttttctcggaaaccactctgccgctgccaccatcaacatctat 466 Query: 460 tttgttacccagcagaacaaaagggaagttatcaggatctgatgggctagcctgaattag 519 ||||| ||||||| |||||||||||||||||| ||||| | ||||| ||||| |||| Sbjct: 465 cttgttccccagcaaaacaaaagggaagttatctggatcagccgggcttgcctgtattaa 406 Query: 520 aaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaac 579 |||||| || | |||| ||||| | ||||| ||||||||| || ||||| ||| Sbjct: 405 aaactcctccctccagcgattcaggctctcaaaagatttcatgacatttacatcataagt 346 Query: 580 tagaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 ||||||||||| || || ||||||||||| ||||||||||| || |||||| Sbjct: 345 aagaacacaacagtctgcaccacggtagaaagcaacaccaaggctctgaaac 294
>emb|BX823067.1|CNS0A5YM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB86ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 759 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 494 ggatctgatgggctagcctgaattagaaactcttcacgccagttgttcagattatcaaat 553 ||||||||||| || ||||| || ||||| ||||| | ||||||||||||||| |||||| Sbjct: 291 ggatctgatggactcgcctggatcagaaattcttccctccagttgttcagattttcaaat 232 Query: 554 gatttcatggagttaacatcgtaaactagaacacaacaatccgctccacggta 606 ||||||||||| || ||||| || | || | ||| ||||| ||||||||||| Sbjct: 231 gatttcatggaattgacatcatatataagtatacagcaatcagctccacggta 179
>emb|Z73940.1|LJRAB7A L.japonicus mRNA for small GTP-binding protein, RAB7A Length = 930 Score = 75.8 bits (38), Expect = 2e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 518 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 577 |||||||| ||| ||||||||| || |||||||||| |||||| |||||||| || Sbjct: 355 agaaactcctcatgccagttgtcaagggtatcaaatgacttcatgacattaacatcatac 296 Query: 578 actagaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 ||||||||||| ||||| ||||| | || |||||||| ||||||||||||||| Sbjct: 295 actagaacacagcaatctgctcctctataaaatgcaaccccaagactttgaaac 242 Score = 48.1 bits (24), Expect = 0.035 Identities = 84/104 (80%) Strand = Plus / Minus Query: 362 gcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttc 421 ||||| ||||||||||| || || |||||||| || |||||||| | || || || ||| Sbjct: 511 gcagatgtctcaaagtagggaatattcccttttgaagcacaccagtcttttgctttcttc 452 Query: 422 tcagagaccacgcgactgttcccaccatctacatcaactttgtt 465 ||||| ||||| | ||| ||||| ||||| | ||||| |||||| Sbjct: 451 tcagaaaccactctactattcccgccatcaatatcaattttgtt 408
>ref|NM_103820.2| Arabidopsis thaliana GTP binding AT1G49300 transcript variant AT1G49300.1 mRNA, complete cds Length = 963 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 475 aacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgcca 534 |||||| || ||||| || ||||| || || || ||||| || ||||||||||| | ||| Sbjct: 452 aacaaagggaaagttctctggatccgaaggacttgcctggatcagaaactcttccctcca 393 Query: 535 gttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatc 594 |||||| |||| || |||||||| |||||| ||||| || || |||||||| ||||| Sbjct: 392 gttgttgagatcctcgaatgattttgcggagttgacatcatatacaagaacacagcaatc 333 Query: 595 cgctccacggtagaatgcaacaccaagactttgaaac 631 || ||||| || || |||||||||||||| |||||| Sbjct: 332 agcaccacgataaaacgcaacaccaagactctgaaac 296
>ref|NM_001036084.1| Arabidopsis thaliana GTP binding AT1G49300 transcript variant AT1G49300.2 mRNA, complete cds Length = 1001 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 475 aacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgcca 534 |||||| || ||||| || ||||| || || || ||||| || ||||||||||| | ||| Sbjct: 456 aacaaagggaaagttctctggatccgaaggacttgcctggatcagaaactcttccctcca 397 Query: 535 gttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatc 594 |||||| |||| || |||||||| |||||| ||||| || || |||||||| ||||| Sbjct: 396 gttgttgagatcctcgaatgattttgcggagttgacatcatatacaagaacacagcaatc 337 Query: 595 cgctccacggtagaatgcaacaccaagactttgaaac 631 || ||||| || || |||||||||||||| |||||| Sbjct: 336 agcaccacgataaaacgcaacaccaagactctgaaac 300
>emb|BX816308.1|CNS0AAI2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH40ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 656 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 475 aacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgcca 534 |||||| || ||||| || ||||| || || || ||||| || ||||||||||| | ||| Sbjct: 266 aacaaagggaaagttctctggatccgaaggacttgcctggatcagaaactcttccctcca 207 Query: 535 gttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatc 594 |||||| |||| || |||||||| |||||| ||||| || || |||||||| ||||| Sbjct: 206 gttgttgagatcctcgaatgattttgcggagttgacatcatatacaagaacacagcaatc 147 Query: 595 cgctccacggtagaatgcaacaccaagactttgaaac 631 || ||||| || || |||||||||||||| |||||| Sbjct: 146 agcaccacgataaaacgcaacaccaagactctgaaac 110
>emb|BX824542.1|CNS0A5QW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 952 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 494 ggatctgatgggctagcctgaattagaaactcttcacgccagttgttcagattatcaaat 553 ||||||||||| || ||||| || | |||||||| | ||||||||||| ||| |||||| Sbjct: 447 ggatctgatggactcgcctggatcaaaaactcttacctccagttgttcatattttcaaat 388 Query: 554 gatttcatggagttaacatcgtaaactagaacacaacaatccgctccacggta 606 ||| ||||||| || ||||| || || | |||||| |||||||| |||||||| Sbjct: 387 gatctcatggaattcacatcatatacaataacacagcaatccgcaccacggta 335
>gb|BT004594.1| Arabidopsis thaliana At1g49300 gene, complete cds Length = 621 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 475 aacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgcca 534 |||||| || ||||| || ||||| || || || ||||| || ||||||||||| | ||| Sbjct: 363 aacaaagggaaagttctctggatccgaaggacttgcctggatcagaaactcttccctcca 304 Query: 535 gttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatc 594 |||||| |||| || |||||||| |||||| ||||| || || |||||||| ||||| Sbjct: 303 gttgttgagatcctcgaatgattttgcggagttgacatcatatacaagaacacagcaatc 244 Query: 595 cgctccacggtagaatgcaacaccaagactttgaaac 631 || ||||| || || |||||||||||||| |||||| Sbjct: 243 agcaccacgataaaacgcaacaccaagactctgaaac 207
>dbj|AB071849.1| Arabidopsis thaliana mRNA for AtRab74, complete cds Length = 621 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 475 aacaaaagggaagttatcaggatctgatgggctagcctgaattagaaactcttcacgcca 534 |||||| || ||||| || ||||| || || || ||||| || ||||||||||| | ||| Sbjct: 363 aacaaagggaaagttctctggatccgaaggacttgcctggatcagaaactcttccctcca 304 Query: 535 gttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaacaatc 594 |||||| |||| || |||||||| |||||| ||||| || || |||||||| ||||| Sbjct: 303 gttgttgagatcctcgaatgattttgcggagttgacatcatatacaagaacacagcaatc 244 Query: 595 cgctccacggtagaatgcaacaccaagactttgaaac 631 || ||||| || || |||||||||||||| |||||| Sbjct: 243 agcaccacgataaaacgcaacaccaagactctgaaac 207
>gb|AC146746.15| Medicago truncatula clone mth2-108p9, complete sequence Length = 95118 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 532 ccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaaca 591 ||||||||| || || |||||||||||||| || ||||||||||| || |||||||| || Sbjct: 258 ccagttgttaaggttgtcaaatgatttcattgaattaacatcgtatacaagaacacagca 317 Query: 592 atccgctccacggtagaatgcaac 615 ||| || ||||| ||||| ||||| Sbjct: 318 atcagccccacgatagaaagcaac 341
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 443 ccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgat 502 |||||||| ||||||| |||||| || || | |||||||||||| || || ||||||||| Sbjct: 7045409 ccaccatcaacatcaattttgtttccaagtacaacaaaagggaaattctctggatctgat 7045350 Query: 503 gggctagcctg 513 ||||||||||| Sbjct: 7045349 gggctagcctg 7045339 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 299 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 358 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 7045639 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 7045580 Query: 359 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 418 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 7045579 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 7045520 Query: 419 ttctcaga 426 |||||||| Sbjct: 7045519 ttctcaga 7045512 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Minus Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaa 630 |||||||| || || ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 7045186 agaacacagcagtcagctccccggtaaaatgccacaccaagactctgaaa 7045137 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 584 acacaacaatccgctccacggtagaatgcaacaccaagact 624 ||||||||||| ||||| | ||| || |||||||||||||| Sbjct: 29727331 acacaacaatctgctcctctgtaaaacgcaacaccaagact 29727371
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 443 ccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgat 502 |||||||| ||||||| |||||| || || | |||||||||||| || || ||||||||| Sbjct: 32989 ccaccatcaacatcaattttgtttccaagtacaacaaaagggaaattctctggatctgat 32930 Query: 503 gggctagcctg 513 ||||||||||| Sbjct: 32929 gggctagcctg 32919 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 299 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 358 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 33219 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 33160 Query: 359 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 418 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 33159 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 33100 Query: 419 ttctcaga 426 |||||||| Sbjct: 33099 ttctcaga 33092 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Minus Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaa 630 |||||||| || || ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 32766 agaacacagcagtcagctccccggtaaaatgccacaccaagactctgaaa 32717
>gb|AC007504.3| Arabidopsis thaliana chromosome I BAC F13F21 genomic sequence, complete sequence Length = 125021 Score = 67.9 bits (34), Expect = 4e-08 Identities = 94/114 (82%) Strand = Plus / Plus Query: 518 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 577 ||||||||||| | ||||||||| |||| || |||||||| |||||| ||||| || Sbjct: 107533 agaaactcttccctccagttgttgagatcctcgaatgattttgcggagttgacatcatat 107592 Query: 578 actagaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 || |||||||| ||||| || ||||| || || |||||||||||||| |||||| Sbjct: 107593 acaagaacacagcaatcagcaccacgataaaacgcaacaccaagactctgaaac 107646
>gb|AY829438.1| Pennisetum glaucum Rab7 mRNA, complete cds Length = 1090 Score = 65.9 bits (33), Expect = 2e-07 Identities = 150/189 (79%) Strand = Plus / Minus Query: 443 ccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgat 502 |||||||| || |||| ||||| || || |||||||| ||||| || || ||||| ||| Sbjct: 459 ccaccatcaacgtcaatcttgtttccaagtagaacaaatgggaaattctctggatcagat 400 Query: 503 gggctagcctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatg 562 |||||||| |||| ||| || || ||||||||||| || || || |||||||| || || Sbjct: 399 gggctagcttgaagtaggaattcctcacgccagttattgagcttctcaaatgacttggtg 340 Query: 563 gagttaacatcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaaga 622 || ||||| || || |||||||| || || ||||| || || ||||| ||||||||| Sbjct: 339 acattgacatcatatacaagaacacagcagtcagctccccgataaaatgccacaccaaga 280 Query: 623 ctttgaaac 631 || |||||| Sbjct: 279 ctctgaaac 271
>ref|XM_748345.1| Aspergillus fumigatus Af293 Rab small monomeric GTPase Rab7 (Afu5g12130) partial mRNA Length = 516 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 572 tcgtaaactagaacacaacaatccgctccacggtagaatgcaacacc 618 ||||| || ||||||||||||||||| || ||||||||||||||||| Sbjct: 254 tcgtataccagaacacaacaatccgcaccccggtagaatgcaacacc 208
>dbj|AB012247.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSL1 Length = 79355 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 521 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 580 |||||||| | ||||||||| ||||| ||||| |||||||| || ||||| | || Sbjct: 52181 aactcttccctccagttgttaagattttcaaaggatttcataacattgacatcattcaca 52122 Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttg 627 ||||||||||| |||||||| |||||||| |||||||| | |||||| Sbjct: 52121 agaacacaacagtccgctcctcggtagaaagcaacacccaaactttg 52075
>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B Length = 1010 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 362 gcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttc 421 ||||| ||||| ||||| ||||| |||||||| || ||||||| | || || || ||| Sbjct: 610 gcagatgtctcgaagtaggggatattcccttttgaaacacaccagtcatttgctttcttc 551 Query: 422 tcagagaccacgcgactgttcccaccatc 450 ||||||||||| ||||| ||||||||||| Sbjct: 550 tcagagaccactcgactattcccaccatc 522
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 ||||||||||| ||| |||||||| | |||||||||||||| |||||||| || ||||| Sbjct: 217957 ctggaaagcctgctcgacgttgatagcctccttggcagaagtttcaaagtaaggaatgtt 218016 Score = 44.1 bits (22), Expect = 0.55 Identities = 49/58 (84%) Strand = Plus / Plus Query: 561 tggagttaacatcgtaaactagaacacaacaatccgctccacggtagaatgcaacacc 618 ||||||| |||||||| || || ||||| || || |||||||||||||| || ||||| Sbjct: 218251 tggagttgacatcgtatacgaggacacagcagtcggctccacggtagaaagcgacacc 218308
>ref|XM_567629.1| Cryptococcus neoformans var. neoformans JEC21 RAB small monomeric GTPase (CNK00660) partial mRNA Length = 964 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 ||||||||||| ||| |||||||| | |||||||||||||| |||||||| || ||||| Sbjct: 519 ctggaaagcctgctcgacgttgatagcctccttggcagaagtttcaaagtaaggaatgtt 460 Score = 44.1 bits (22), Expect = 0.55 Identities = 49/58 (84%) Strand = Plus / Minus Query: 561 tggagttaacatcgtaaactagaacacaacaatccgctccacggtagaatgcaacacc 618 ||||||| |||||||| || || ||||| || || |||||||||||||| || ||||| Sbjct: 289 tggagttgacatcgtatacgaggacacagcagtcggctccacggtagaaagcgacacc 232
>emb|X65650.1|PSGTPBP P.sativum mRNA rab for ras-related GTP-binding protein Length = 915 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 512 tgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaaca 571 ||||| ||||||||||| | |||||| || || || |||||||| |||| || |||||| Sbjct: 397 tgaatgagaaactcttccctccagttattaaggttgtcaaatgacttcactgaattaaca 338 Query: 572 tcgtaaactagaacacaacaatccgctccacggtagaatgcaac 615 || || || |||||||| ||||| || ||||| ||||| ||||| Sbjct: 337 tcatatacaagaacacagcaatcagcaccacgatagaaagcaac 294 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 362 gcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttc 421 ||||| |||||||| |||||||| || ||||| | |||||||||||| ||||| || Sbjct: 547 gcagatgtctcaaaatatgggatatttccttttgctgcacaccatgcccgagccttcttt 488 Query: 422 tcagagaccacgcgactgttcccaccatc 450 ||||| ||||| | |||||| |||||||| Sbjct: 487 tcagaaaccactctactgtttccaccatc 459
>gb|L14930.1|SOYRAB7P Glycine max (Rab7p) mRNA, complete cds Length = 1166 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 371 tcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttctcagagacc 430 |||||||| || || |||||||| | ||||||||| |||| || || |||||||| ||| Sbjct: 708 tcaaagtagggaatattcccttttgcggcacaccagtcctttgctttcttctcagaaacc 649 Query: 431 acgcgactgttcccaccatc 450 || ||||| ||||||||||| Sbjct: 648 actcgactattcccaccatc 629
>ref|NM_102121.2| Arabidopsis thaliana RAB7; GTP binding AT1G22740 (RAB7) mRNA, complete cds Length = 973 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 |||||||||||||| || || | ||||| ||||||||||||||||||||| Sbjct: 404 agaacacaacaatctgcacctctatagaaagcaacaccaagactttgaaac 354
>ref|XM_652601.1| Aspergillus nidulans FGSC A4 Ras-related protein Rab7 (AN0089.2), mRNA Length = 606 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 569 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaac 615 ||||||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 257 acatcgtaaacaaggacacaacagtcagctccccggtagaatgcaac 211
>emb|Y12227.1|ATY12227 Arabidopsis thaliana DNA, 24 kb surrounding PFL locus Length = 24053 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 |||||||||||||| || || | ||||| ||||||||||||||||||||| Sbjct: 2892 agaacacaacaatctgcacctctatagaaagcaacaccaagactttgaaac 2842
>emb|Y09821.1|ATY09821 A.thaliana mRNA for GTP-binding protein Length = 957 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 |||||||||||||| || || | ||||| ||||||||||||||||||||| Sbjct: 404 agaacacaacaatctgcacctctatagaaagcaacaccaagactttgaaac 354
>gb|BT024589.1| Arabidopsis thaliana At1g22740 mRNA, complete cds Length = 612 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 |||||||||||||| || || | ||||| ||||||||||||||||||||| Sbjct: 257 agaacacaacaatctgcacctctatagaaagcaacaccaagactttgaaac 207
>emb|BX817523.1|CNS0AE7L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL28ZH01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 843 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 |||||||||||||| || || | ||||| ||||||||||||||||||||| Sbjct: 389 agaacacaacaatctgcacctctatagaaagcaacaccaagactttgaaac 339
>emb|BX817282.1|CNS0AB8C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL10ZD01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1023 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 |||||||||||||| || || | ||||| ||||||||||||||||||||| Sbjct: 500 agaacacaacaatctgcacctctatagaaagcaacaccaagactttgaaac 450
>gb|AC003979.2|T22J18 Arabidopsis thaliana chromosome 1 BAC T22J18 sequence, complete sequence Length = 84162 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 |||||||||||||| || || | ||||| ||||||||||||||||||||| Sbjct: 29478 agaacacaacaatctgcacctctatagaaagcaacaccaagactttgaaac 29528
>dbj|AB071850.1| Arabidopsis thaliana mRNA for AtRab75, complete cds Length = 612 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 581 agaacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 |||||||||||||| || || | ||||| ||||||||||||||||||||| Sbjct: 257 agaacacaacaatctgcacctctatagaaagcaacaccaagactttgaaac 207
>dbj|AB072431.1| Aspergillus nidulans gene for small GTPase AvaA, complete cds Length = 1500 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 569 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaac 615 ||||||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 850 acatcgtaaacaaggacacaacagtcagctccccggtagaatgcaac 804
>ref|XM_445802.1| Candida glabrata CBS138, CAGL0E02607g partial mRNA Length = 627 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 569 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaag 621 ||||| || ||||| |||||||| || || ||||||||||| ||||||||||| Sbjct: 272 acatcatagactagtacacaacagtctgcaccacggtagaaagcaacaccaag 220
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 569 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaacaccaag 621 ||||| || ||||| |||||||| || || ||||||||||| ||||||||||| Sbjct: 249116 acatcatagactagtacacaacagtctgcaccacggtagaaagcaacaccaag 249168
>ref|NM_064148.2| Caenorhabditis elegans RAB family member (rab-7) (rab-7) mRNA, complete cds Length = 1094 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 503 gggctagcctgaattagaaactcttcacgcca 534 |||||||||||||| |||||||| |||||||| Sbjct: 369 gggctagcctgaatcagaaactcgtcacgcca 338
>ref|XM_640819.1| Dictyostelium discoideum Rab GTPase (DDB0191507), partial mRNA Length = 612 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 359 ttggcagaagtctcaaagtatgggatgttcccttt 393 ||||||||||| ||||||||||| ||||| ||||| Sbjct: 473 ttggcagaagtttcaaagtatggaatgttaccttt 439
>ref|XM_362561.1| Magnaporthe grisea 70-15 hypothetical protein (MG08144.4) partial mRNA Length = 618 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 584 acacaacaatccgctccacggtagaatgcaacacc 618 ||||| || ||||||||||||||||| |||||||| Sbjct: 254 acacagcagtccgctccacggtagaacgcaacacc 220
>ref|XM_321482.2| Anopheles gambiae str. PEST ENSANGP00000018151 (ENSANGG00000015662), partial mRNA Length = 624 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 571 atcgtaaactagaacacaacaatccgctccacggtagaa 609 |||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 267 atcgtacactagcacacagcaatccgccccacggtagaa 229
>ref|XM_307368.2| Anopheles gambiae str. PEST ENSANGP00000013739 (ENSANGG00000011250), partial mRNA Length = 624 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 571 atcgtaaactagaacacaacaatccgctccacggtagaa 609 |||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 267 atcgtacactagcacacagcaatccgccccacggtagaa 229
>gb|AY849659.1| Magnaporthe grisea ras-related protein-like protein mRNA, complete cds Length = 1221 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 584 acacaacaatccgctccacggtagaatgcaacacc 618 ||||| || ||||||||||||||||| |||||||| Sbjct: 537 acacagcagtccgctccacggtagaacgcaacacc 503
>gb|U02928.1|DDU02928 Dictyostelium discoideum Ax3 Rab7 mRNA, complete cds Length = 769 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 359 ttggcagaagtctcaaagtatgggatgttcccttt 393 ||||||||||| ||||||||||| ||||| ||||| Sbjct: 523 ttggcagaagtttcaaagtatggaatgttaccttt 489
>gb|AY432204.1| Aedes aegypti ASAP ID: 43000 Rab protein 7 mRNA sequence Length = 728 Score = 44.1 bits (22), Expect = 0.55 Identities = 37/42 (88%) Strand = Plus / Minus Query: 571 atcgtaaactagaacacaacaatccgctccacggtagaatgc 612 |||||| ||||| || |||||||| ||||| ||||||||||| Sbjct: 372 atcgtatactagtacgcaacaatctgctccgcggtagaatgc 331
>gb|BC072470.1| Rattus norvegicus RAB7, member RAS oncogene family, mRNA (cDNA clone MGC:91396 IMAGE:7098657), complete cds Length = 2107 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 461 ttgttacccagcagaacaaaagggaagttatcaggatc 498 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 545 ttgtttcccaacacaacaaaagggaagttctcaggatc 508
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence Length = 93173 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 436 actgttcccaccatctacatcaactttgtt 465 |||||| ||||||||||||||||| ||||| Sbjct: 56239 actgtttccaccatctacatcaaccttgtt 56210
>emb|X12535.1|RNRASP23 Rat mRNA for ras-related protein p23 Length = 1269 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 461 ttgttacccagcagaacaaaagggaagttatcaggatc 498 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 418 ttgtttcccaacacaacaaaagggaagttctcaggatc 381
>gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete sequence Length = 114538 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 436 actgttcccaccatctacatcaactttgtt 465 |||||| ||||||||||||||||| ||||| Sbjct: 12039 actgtttccaccatctacatcaaccttgtt 12010
>ref|NM_023950.3| Rattus norvegicus RAB7, member RAS oncogene family (Rab7), mRNA Length = 2107 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 461 ttgttacccagcagaacaaaagggaagttatcaggatc 498 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 545 ttgtttcccaacacaacaaaagggaagttctcaggatc 508
>gb|AF286535.1|AF286535 Rattus norvegicus GTP-binding protein RAB7 (Rab7) mRNA, complete cds Length = 861 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 461 ttgttacccagcagaacaaaagggaagttatcaggatc 498 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 541 ttgtttcccaacacaacaaaagggaagttctcaggatc 504
>dbj|AB158428.1| Rattus norvegicus Rab7 mRNA for RAB7, complete cds, strain:LEC/Crj Length = 624 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 461 ttgttacccagcagaacaaaagggaagttatcaggatc 498 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 377 ttgtttcccaacacaacaaaagggaagttctcaggatc 340
>dbj|AB158427.1| Rattus norvegicus Rab7 mRNA for RAB7, complete cds, strain:F344/DuCrj Length = 624 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 461 ttgttacccagcagaacaaaagggaagttatcaggatc 498 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 377 ttgtttcccaacacaacaaaagggaagttctcaggatc 340
>ref|NM_191744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 597 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 584 acacaacaatccgctccacggtagaatgcaacaccaagact 624 ||||||||||| ||||| | ||| || |||||||||||||| Sbjct: 230 acacaacaatctgctcctctgtaaaacgcaacaccaagact 190
>gb|AC148465.2| Xenopus tropicalis clone CH216-65A19, complete sequence Length = 167567 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 cccacagttgtgggccctcat 213 ||||||||||||||||||||| Sbjct: 110353 cccacagttgtgggccctcat 110333
>emb|Z66516.1|CEW03C9 Caenorhabditis elegans Cosmid W03C9, complete sequence Length = 36103 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 506 ctagcctgaattagaaactcttcacgcca 534 ||||||||||| |||||||| |||||||| Sbjct: 33653 ctagcctgaatcagaaactcgtcacgcca 33681
>emb|BX571940.12| Zebrafish DNA sequence from clone DKEY-171N3 in linkage group 14, complete sequence Length = 179550 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 actacacaaacgtccacaaat 72 ||||||||||||||||||||| Sbjct: 170400 actacacaaacgtccacaaat 170420
>gb|AC093301.3| Homo sapiens chromosome 5 clone RP11-565F4, complete sequence Length = 178545 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 gttcagattatcaaatgattt 558 ||||||||||||||||||||| Sbjct: 57815 gttcagattatcaaatgattt 57835
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 584 acacaacaatccgctccacggtagaatgcaacaccaagact 624 ||||||||||| ||||| | ||| || |||||||||||||| Sbjct: 57062 acacaacaatctgctcctctgtaaaacgcaacaccaagact 57102
>dbj|AK111495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E15, full insert sequence Length = 994 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 584 acacaacaatccgctccacggtagaatgcaacaccaagact 624 ||||||||||| ||||| | ||| || |||||||||||||| Sbjct: 377 acacaacaatctgctcctctgtaaaacgcaacaccaagact 337
>gb|U13170.1|CRU13170 Chlamydomonas reinhardtii YptC5 (yptC5) gene, complete cds Length = 2990 Score = 42.1 bits (21), Expect = 2.2 Identities = 69/85 (81%) Strand = Plus / Minus Query: 339 cctccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagagg 398 ||||||||||||| | |||||||| || ||||| ||||| || ||| | || || |||| Sbjct: 2237 cctccacgttgatgtcctccttggccgacgtctcgaagtagggtatgctgcccttggagg 2178 Query: 399 cacaccatgccttcgcctttttctc 423 | ||||| ||||| ||||| ||||| Sbjct: 2177 cgcaccaggccttggccttcttctc 2153
>gb|L29276.1|TOBNTRAI Nicotiana tabacum SR1 Nt-rab7c mRNA, complete cds Length = 993 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 583 aacacaacaatccgctccacggtagaatgcaacaccaagactttgaaac 631 |||||||||||| ||||| | || |||||||| |||||||| |||||| Sbjct: 292 aacacaacaatctgctcctctataaaatgcaaccccaagactctgaaac 244
>ref|XM_526302.1| PREDICTED: Pan troglodytes similar to Ras-related protein Rab-7 (LOC470919), mRNA Length = 624 Score = 40.1 bits (20), Expect = 8.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 501 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 442
>gb|AC133880.7| Mus musculus chromosome 15, clone RP24-142B13, complete sequence Length = 135091 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 247 gttgccgcccaccacgtccacagtgtcc 274 ||||||||||||||| ||| |||||||| Sbjct: 73094 gttgccgcccaccacttcctcagtgtcc 73067
>gb|AY321151.1| Aiptasia pulchella Rab7 mRNA, complete cds Length = 1037 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 340 ctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||||||||| | || |||||| |||||||||||| |||||||| Sbjct: 616 ctccacgttgatggcttctttggcactagtctcaaagtaggggatgtt 569
>ref|NM_004637.5| Homo sapiens RAB7, member RAS oncogene family (RAB7), mRNA Length = 2240 Score = 40.1 bits (20), Expect = 8.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 733 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 674
>gb|AC186172.1| Ornithorhynchus anatinus chromosome UNK clone OABb-43A1, complete sequence Length = 180865 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ttcctctggctcattcttca 308 |||||||||||||||||||| Sbjct: 4032 ttcctctggctcattcttca 4051
>gb|U44104.1|HSU44104 Homo sapiens small GTP binding protein Rab7 mRNA, complete cds Length = 624 Score = 40.1 bits (20), Expect = 8.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 501 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 442
>gb|AY318871.1| Canarypox virus strain ATCC VR-111, complete genome Length = 359853 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tactgatgataatgataaaa 52 |||||||||||||||||||| Sbjct: 344585 tactgatgataatgataaaa 344604
>gb|AC124598.5| Mus musculus BAC clone RP23-22P3 from 13, complete sequence Length = 220624 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tccttggcagaagtctcaaa 375 |||||||||||||||||||| Sbjct: 37282 tccttggcagaagtctcaaa 37301
>gb|AC113016.7| Mus musculus chromosome 9, clone RP23-181L13, complete sequence Length = 213244 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ccagttgttcagattatcaa 551 |||||||||||||||||||| Sbjct: 73619 ccagttgttcagattatcaa 73638
>emb|AL160059.7| Human DNA sequence from clone RP11-94G15 on chromosome 1 Contains the 5' end of the CACNA1E gene for calcium channel voltage-dependent alpha 1E subunit, complete sequence Length = 153926 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cactggaaagcctcctccac 345 |||||||||||||||||||| Sbjct: 89435 cactggaaagcctcctccac 89416
>emb|X93499.1|HSRAB7 H.sapiens mRNA for RAB7 protein Length = 2264 Score = 40.1 bits (20), Expect = 8.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 1103 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 1044
>emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chromosome 13 Contains part of a novel gene, complete sequence Length = 150986 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 tacccagcagaacaaaaggg 484 |||||||||||||||||||| Sbjct: 118936 tacccagcagaacaaaaggg 118955
>gb|BC008721.2| Homo sapiens RAB7, member RAS oncogene family, mRNA (cDNA clone MGC:8453 IMAGE:2821435), complete cds Length = 1489 Score = 40.1 bits (20), Expect = 8.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 676 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 617
>emb|CR759748.6| Zebrafish DNA sequence from clone DKEYP-118G11 in linkage group 17, complete sequence Length = 165743 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 gatgataatgataaaactac 56 |||||||||||||||||||| Sbjct: 152227 gatgataatgataaaactac 152208
>emb|CR859246.1| Pongo pygmaeus mRNA; cDNA DKFZp459E131 (from clone DKFZp459E131) Length = 2251 Score = 40.1 bits (20), Expect = 8.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 710 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 651
>dbj|AK094449.1| Homo sapiens cDNA FLJ37130 fis, clone BRACE2023069, weakly similar to RAS-RELATED PROTEIN RAB-7 Length = 1911 Score = 40.1 bits (20), Expect = 8.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 414 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 355
>gb|AF498942.1| Homo sapiens small GTP binding protein RAB7 (RAB7) mRNA, complete cds Length = 624 Score = 40.1 bits (20), Expect = 8.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 501 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 442
>emb|BX322796.12| Zebrafish DNA sequence from clone DKEY-210F16 in linkage group 17, complete sequence Length = 68234 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 gatgataatgataaaactac 56 |||||||||||||||||||| Sbjct: 33118 gatgataatgataaaactac 33099
>gb|AC023598.30| Homo sapiens 3 BAC RP11-221E20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 66685 Score = 40.1 bits (20), Expect = 8.6 Identities = 50/60 (83%) Strand = Plus / Plus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 49255 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 49314
>gb|AC092840.4| Homo sapiens BAC clone RP11-258O11 from 2, complete sequence Length = 133042 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tttactatacactggaaagc 336 |||||||||||||||||||| Sbjct: 31736 tttactatacactggaaagc 31755
>gb|AC144772.2| Mus musculus BAC clone RP24-173G12 from chromosome 15, complete sequence Length = 160630 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 acactggaaagcctcctcca 344 |||||||||||||||||||| Sbjct: 110226 acactggaaagcctcctcca 110207
>gb|AC009567.8|AC009567 Homo sapiens chromosome 4, clone RP11-21G20, complete sequence Length = 164823 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 cctgaattagaaactcttca 529 |||||||||||||||||||| Sbjct: 157683 cctgaattagaaactcttca 157702
>dbj|AK000826.1| Homo sapiens cDNA FLJ20819 fis, clone ADSE00511 Length = 2190 Score = 40.1 bits (20), Expect = 8.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 676 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 617
>gb|AF050175.1|AF050175 Homo sapiens Rab7 (Rab7) gene, complete cds Length = 624 Score = 40.1 bits (20), Expect = 8.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 501 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 442
>dbj|AK113741.1| Ciona intestinalis cDNA, clone:cicl007i22, full insert sequence Length = 2711 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 agattatcaaatgatttcat 561 |||||||||||||||||||| Sbjct: 948 agattatcaaatgatttcat 929
>gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, complete sequence Length = 240321 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tccttggcagaagtctcaaa 375 |||||||||||||||||||| Sbjct: 19677 tccttggcagaagtctcaaa 19658
>gb|BC013728.1| Homo sapiens RAB7, member RAS oncogene family, mRNA (cDNA clone MGC:17256 IMAGE:3882701), complete cds Length = 1358 Score = 40.1 bits (20), Expect = 8.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 328 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 387 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 516 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 457
>gb|L08131.1|VVCPTVD Volvox carteri GTP-binding protein (yptV5) gene, complete CDS Length = 3102 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 368 gtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttctc 423 |||||||||||||| ||| | || || || || ||||||||||| ||||| ||||| Sbjct: 1987 gtctcaaagtatggtatgctgcccttggacgcgcaccatgccttagccttcttctc 1932 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,145,493 Number of Sequences: 3902068 Number of extensions: 5145493 Number of successful extensions: 96086 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95749 Number of HSP's gapped (non-prelim): 324 length of query: 631 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 608 effective length of database: 17,143,297,704 effective search space: 10423125004032 effective search space used: 10423125004032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)