ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18h21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463690.1| Oryza sativa (japonica cultivar-group), predic... 391 e-105
2dbj|AK068569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 182 9e-43
4dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic D... 182 9e-43
5gb|AY110218.1| Zea mays CL6853_1 mRNA sequence 60 9e-06
6ref|NM_111648.3| Arabidopsis thaliana glycerol-3-phosphate dehyd... 58 3e-05
7gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
8gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 ... 54 5e-04
9gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC... 54 5e-04
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
11dbj|AK101484.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
12dbj|AK066880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
13dbj|AK047637.1| Mus musculus adult male corpus striatum cDNA, RI... 46 0.13
14emb|AL928902.16| Mouse DNA sequence from clone RP24-221D3 on chr... 46 0.13
15gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.52
16emb|AL359292.12| Human DNA sequence from clone RP3-448K1 on chro... 44 0.52
17emb|AL928704.10| Mouse DNA sequence from clone RP23-393G10 on ch... 42 2.1
18gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 42 2.1
19dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 42 2.1
20ref|NM_129717.3| Arabidopsis thaliana glycerol-3-phosphate dehyd... 40 8.2
21ref|NM_001036448.1| Arabidopsis thaliana glycerol-3-phosphate de... 40 8.2
22ref|NM_180021.2| Arabidopsis thaliana glycerol-3-phosphate dehyd... 40 8.2
23ref|XM_323660.1| Neurospora crassa OR74A predicted protein (NCU0... 40 8.2
24ref|XM_955874.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
25emb|BX927107.9| Zebrafish DNA sequence from clone CH211-281H20 i... 40 8.2
26ref|XM_810831.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.2
27ref|XM_810833.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.2
28ref|XM_797493.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.2
29gb|AC158532.2| Mus musculus BAC clone RP23-178C22 from chromosom... 40 8.2
30emb|AL356772.14| Human DNA sequence from clone RP11-47B24 on chr... 40 8.2
31gb|AY091247.1| Arabidopsis thaliana putative glycerol-3-phosphat... 40 8.2
32gb|AY063920.1| Arabidopsis thaliana putative glycerol-3-phosphat... 40 8.2
33emb|BX294026.1|NCB7H23 Neurospora crassa DNA linkage group V BAC... 40 8.2
34gb|AC113190.8| Homo sapiens chromosome 15, clone RP11-186H10, co... 40 8.2
35gb|AC112706.2| Homo sapiens chromosome 19 clone CTD-3195E18, com... 40 8.2
36gb|AC011505.6| Homo sapiens chromosome 19 clone CTD-2081K17, com... 40 8.2
37gb|AC092074.3| Homo sapiens chromosome 19 clone X200282, complet... 40 8.2
38emb|AL808027.14| Mouse DNA sequence from clone RP23-161B9 on chr... 40 8.2
39emb|BX820067.1|CNS0AAG2 Arabidopsis thaliana Full-length cDNA Co... 40 8.2
40emb|BX323808.7| Zebrafish DNA sequence from clone DKEY-117N4, co... 40 8.2
41gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, com... 40 8.2
42gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 m... 40 8.2
43gb|AC005319.1|AC005319 Human Chromosome 15q26.1 PAC clone pDJ430... 40 8.2
44emb|AJ347019.1|ATH347019 Arabidopsis thaliana mRNA for glycerol-... 40 8.2
45gb|AC005379.1|AC005379 Homo sapiens chromosome 19, cosmid R32603... 40 8.2
46emb|AL845447.3| Mouse DNA sequence from clone RP23-133L20 on chr... 40 8.2 
>ref|XM_463690.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1371

 Score =  391 bits (197), Expect = e-105
 Identities = 323/365 (88%)
 Strand = Plus / Minus

                                                                        
Query: 238  aggagagacgggcggtagaatgtgtggctctgcgccatctcgatcctctcacgagggtcg 297
            |||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 1358 aggagagatgggcggtagaatgcatggctttgcgccatctcaatcctttcacgaggatca 1299

                                                                        
Query: 298  ttcatggtttcgtccctcagggcttggaggatgtctctcaccgggagctccctttttatc 357
            ||||||||||| || ||||||||||| || || |||||   || ||||||||||||||| 
Sbjct: 1298 ttcatggtttcatctctcagggcttgcagaatatctcttgtcgagagctccctttttatt 1239

                                                                        
Query: 358  agaattctataaagcctcttcagaattgggcacagttcagcaggagccacttgcttgttt 417
            || |||||||| ||||||||||  || ||||||||||||||||| || |||||||| |||
Sbjct: 1238 agtattctatagagcctcttcaagatcgggcacagttcagcaggtgcaacttgcttattt 1179

                                                                        
Query: 418  tcctctgggtgtagaacacttaagctgggttgactgagcagctcaaaaaatgcaccaaca 477
            |||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1178 tcctctgggtgttgcacacttaagctgggttgactgagaagctcaaaaaatgcaccaaca 1119

                                                                        
Query: 478  gcagaaataccctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagt 537
            ||||| |||||||||||||||||||| || ||||| ||||| ||||| ||  | || |||
Sbjct: 1118 gcagagataccctgaatcatccccttccccttgatgctgtcgcccatgtcagggctcagt 1059

                                                                        
Query: 538  tctcccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataa 597
            ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1058 tctcccttcgctagcatttgcccataccacgcattgcgacctttcaggagagtaacataa 999

                 
Query: 598  gtatc 602
            |||||
Sbjct: 998  gtatc 994
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>dbj|AK068569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E21, full
            insert sequence
          Length = 2080

 Score =  391 bits (197), Expect = e-105
 Identities = 323/365 (88%)
 Strand = Plus / Minus

                                                                        
Query: 238  aggagagacgggcggtagaatgtgtggctctgcgccatctcgatcctctcacgagggtcg 297
            |||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 1841 aggagagatgggcggtagaatgcatggctttgcgccatctcaatcctttcacgaggatca 1782

                                                                        
Query: 298  ttcatggtttcgtccctcagggcttggaggatgtctctcaccgggagctccctttttatc 357
            ||||||||||| || ||||||||||| || || |||||   || ||||||||||||||| 
Sbjct: 1781 ttcatggtttcatctctcagggcttgcagaatatctcttgtcgagagctccctttttatt 1722

                                                                        
Query: 358  agaattctataaagcctcttcagaattgggcacagttcagcaggagccacttgcttgttt 417
            || |||||||| ||||||||||  || ||||||||||||||||| || |||||||| |||
Sbjct: 1721 agtattctatagagcctcttcaagatcgggcacagttcagcaggtgcaacttgcttattt 1662

                                                                        
Query: 418  tcctctgggtgtagaacacttaagctgggttgactgagcagctcaaaaaatgcaccaaca 477
            |||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1661 tcctctgggtgttgcacacttaagctgggttgactgagaagctcaaaaaatgcaccaaca 1602

                                                                        
Query: 478  gcagaaataccctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagt 537
            ||||| |||||||||||||||||||| || ||||| ||||| ||||| ||  | || |||
Sbjct: 1601 gcagagataccctgaatcatccccttccccttgatgctgtcgcccatgtcagggctcagt 1542

                                                                        
Query: 538  tctcccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataa 597
            ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1541 tctcccttcgctagcatttgcccataccacgcattgcgacctttcaggagagtaacataa 1482

                 
Query: 598  gtatc 602
            |||||
Sbjct: 1481 gtatc 1477
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  182 bits (92), Expect = 9e-43
 Identities = 131/144 (90%)
 Strand = Plus / Minus

                                                                            
Query: 348      cctttttatcagaattctataaagcctcttcagaattgggcacagttcagcaggagccac 407
                ||||||||| || |||||||| ||||||||||  || ||||||||||||||||| || ||
Sbjct: 41241436 cctttttattagtattctatagagcctcttcaagatcgggcacagttcagcaggtgcaac 41241377

                                                                            
Query: 408      ttgcttgttttcctctgggtgtagaacacttaagctgggttgactgagcagctcaaaaaa 467
                |||||| ||||||||||||||| | ||||||||||||||||||||||| |||||||||||
Sbjct: 41241376 ttgcttattttcctctgggtgttgcacacttaagctgggttgactgagaagctcaaaaaa 41241317

                                        
Query: 468      tgcaccaacagcagaaataccctg 491
                ||||||||||||||| ||||||||
Sbjct: 41241316 tgcaccaacagcagagataccctg 41241293



 Score =  133 bits (67), Expect = 7e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                            
Query: 488      cctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagttctcccttcg 547
                |||||||||||||||| || ||||| ||||| ||||| ||  | || |||||||||||||
Sbjct: 41241157 cctgaatcatccccttccccttgatgctgtcgcccatgtcagggctcagttctcccttcg 41241098

                                                                       
Query: 548      ctagcatttgcccataccatgcattgcgaccttttaggagagttacataagtatc 602
                ||||||||||||||||||| |||||||||||||| |||||||| |||||||||||
Sbjct: 41241097 ctagcatttgcccataccacgcattgcgacctttcaggagagtaacataagtatc 41241043



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                            
Query: 238      aggagagacgggcggtagaatgtgtggctctgcgccatctcgatcctctcacgagggtcg 297
                |||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 41242014 aggagagatgggcggtagaatgcatggctttgcgccatctcaatcctttcacgaggatca 41241955

                                          
Query: 298      ttcatggtttcgtccctcagggcttg 323
                ||||||||||| || |||||||||||
Sbjct: 41241954 ttcatggtttcatctctcagggcttg 41241929
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>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1150F11
          Length = 130355

 Score =  182 bits (92), Expect = 9e-43
 Identities = 131/144 (90%)
 Strand = Plus / Minus

                                                                         
Query: 348   cctttttatcagaattctataaagcctcttcagaattgggcacagttcagcaggagccac 407
             ||||||||| || |||||||| ||||||||||  || ||||||||||||||||| || ||
Sbjct: 58351 cctttttattagtattctatagagcctcttcaagatcgggcacagttcagcaggtgcaac 58292

                                                                         
Query: 408   ttgcttgttttcctctgggtgtagaacacttaagctgggttgactgagcagctcaaaaaa 467
             |||||| ||||||||||||||| | ||||||||||||||||||||||| |||||||||||
Sbjct: 58291 ttgcttattttcctctgggtgttgcacacttaagctgggttgactgagaagctcaaaaaa 58232

                                     
Query: 468   tgcaccaacagcagaaataccctg 491
             ||||||||||||||| ||||||||
Sbjct: 58231 tgcaccaacagcagagataccctg 58208



 Score =  133 bits (67), Expect = 7e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                         
Query: 488   cctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagttctcccttcg 547
             |||||||||||||||| || ||||| ||||| ||||| ||  | || |||||||||||||
Sbjct: 58072 cctgaatcatccccttccccttgatgctgtcgcccatgtcagggctcagttctcccttcg 58013

                                                                    
Query: 548   ctagcatttgcccataccatgcattgcgaccttttaggagagttacataagtatc 602
             ||||||||||||||||||| |||||||||||||| |||||||| |||||||||||
Sbjct: 58012 ctagcatttgcccataccacgcattgcgacctttcaggagagtaacataagtatc 57958



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                         
Query: 238   aggagagacgggcggtagaatgtgtggctctgcgccatctcgatcctctcacgagggtcg 297
             |||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 58929 aggagagatgggcggtagaatgcatggctttgcgccatctcaatcctttcacgaggatca 58870

                                       
Query: 298   ttcatggtttcgtccctcagggcttg 323
             ||||||||||| || |||||||||||
Sbjct: 58869 ttcatggtttcatctctcagggcttg 58844
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>gb|AY110218.1| Zea mays CL6853_1 mRNA sequence
          Length = 1098

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                       
Query: 448 tgactgagcagctcaaaaaatgcaccaacagcagaaataccctgaatcatcccctttcct 507
           ||||| || |||||| |||| ||| |||| ||||| | |||||||||  |||| ||||||
Sbjct: 453 tgactaagaagctcataaaacgcatcaactgcagagacaccctgaatggtcccttttcct 512

                                                                       
Query: 508 ttgatactgtcacccatatcgagcctgagttctcccttcgctagcatttgcccataccat 567
           || |||||||||||||| || |   | | ||| || || |||| | | ||||||||||||
Sbjct: 513 ttaatactgtcacccatttctaatgtcaattcacctttagctaacttctgcccataccat 572

                         
Query: 568 gcattgcgaccttt 581
           ||||| ||||||||
Sbjct: 573 gcattacgaccttt 586
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>ref|NM_111648.3| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+)
            AT3G07690 mRNA, complete cds
          Length = 1811

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 478  gcagaaataccctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagt 537
            |||||||  ||||||||||| ||||| |||||||| ||||||||||| || || || |||
Sbjct: 1239 gcagaaaccccctgaatcattcccttgcctttgatgctgtcacccatttcaaggctaagt 1180

                 
Query: 538  tctcc 542
            |||||
Sbjct: 1179 tctcc 1175
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>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03,
              complete sequence
          Length = 121466

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                             
Query: 556    tgcccataccatgcattgcgaccttttaggagagttacataagtatc 602
              ||||||||||||||||| |||||||| || || |||||||| |||||
Sbjct: 101453 tgcccataccatgcattacgacctttcagcagtgttacataggtatc 101407
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>gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 MLP3 genomic sequence, complete
             sequence
          Length = 79296

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 488   cctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagttctcc 542
             |||||||||| ||||| |||||||| ||||||||||| || || || ||||||||
Sbjct: 44656 cctgaatcattcccttgcctttgatgctgtcacccatttcaaggctaagttctcc 44602
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>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence,
            complete sequence
          Length = 121054

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 488  cctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagttctcc 542
            |||||||||| ||||| |||||||| ||||||||||| || || || ||||||||
Sbjct: 9690 cctgaatcattcccttgcctttgatgctgtcacccatttcaaggctaagttctcc 9636
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 556      tgcccataccatgcattgcgaccttttaggagagttacataagtatc 602
                ||||||||||||||||| |||||||| || || |||||||| |||||
Sbjct: 24215215 tgcccataccatgcattacgacctttcagcagtgttacataggtatc 24215169



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 400     ggagccacttgcttgttttcctctgg 425
               ||||||||||||||||||| ||||||
Sbjct: 6797081 ggagccacttgcttgttttactctgg 6797056
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>dbj|AK101484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041G24, full
            insert sequence
          Length = 2029

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 556  tgcccataccatgcattgcgaccttttaggagagttacataagtatc 602
            ||||||||||||||||| |||||||| || || |||||||| |||||
Sbjct: 1507 tgcccataccatgcattacgacctttcagcagtgttacataggtatc 1461
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>dbj|AK066880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087A13, full
            insert sequence
          Length = 2858

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 556  tgcccataccatgcattgcgaccttttaggagagttacataagtatc 602
            ||||||||||||||||| |||||||| || || |||||||| |||||
Sbjct: 2098 tgcccataccatgcattacgacctttcagcagtgttacataggtatc 2052
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>dbj|AK047637.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
            enriched library, clone:C030004B14 product:inferred:
            myelin basic protein expression factor 2, repressor, full
            insert sequence
          Length = 4367

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 487  ccctgaatcatcccctttccttt 509
            |||||||||||||||||||||||
Sbjct: 3384 ccctgaatcatcccctttccttt 3406
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>emb|AL928902.16| Mouse DNA sequence from clone RP24-221D3 on chromosome 2, complete
              sequence
          Length = 167573

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 487    ccctgaatcatcccctttccttt 509
              |||||||||||||||||||||||
Sbjct: 156674 ccctgaatcatcccctttccttt 156652
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>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0074P11, complete sequence
          Length = 148753

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 400   ggagccacttgcttgttttcctctgg 425
             ||||||||||||||||||| ||||||
Sbjct: 28035 ggagccacttgcttgttttactctgg 28010
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>emb|AL359292.12| Human DNA sequence from clone RP3-448K1 on chromosome 6 Contains the
            5' end of the AIM1 gene for absent in melanoma 1 and two
            CpG islands, complete sequence
          Length = 53905

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 415  ttttcctctgggtgtagaacacttaa 440
            |||||||||||||||||| |||||||
Sbjct: 6959 ttttcctctgggtgtagatcacttaa 6934
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>emb|AL928704.10| Mouse DNA sequence from clone RP23-393G10 on chromosome 2, complete
             sequence
          Length = 171715

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 446   gttgactgagcagctcaaaaa 466
             |||||||||||||||||||||
Sbjct: 77664 gttgactgagcagctcaaaaa 77684
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 308     cgtccctcagggcttggaggatgtc 332
               ||||| |||||||||||||||||||
Sbjct: 5313421 cgtccttcagggcttggaggatgtc 5313445
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 308     cgtccctcagggcttggaggatgtc 332
               ||||| |||||||||||||||||||
Sbjct: 5283435 cgtccttcagggcttggaggatgtc 5283459
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>ref|NM_129717.3| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+)
            AT2G41540 transcript variant AT2G41540.1 mRNA, complete
            cds
          Length = 2712

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 464  aaaatgcaccaacagcagaaataccctgaatcatcccctt 503
            ||||||| || || ||||||| |||||||||||| |||||
Sbjct: 1305 aaaatgctcccactgcagaaacaccctgaatcattccctt 1266
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>ref|NM_001036448.1| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+)
            AT2G41540 transcript variant AT2G41540.3 mRNA, complete
            cds
          Length = 2771

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 464  aaaatgcaccaacagcagaaataccctgaatcatcccctt 503
            ||||||| || || ||||||| |||||||||||| |||||
Sbjct: 1401 aaaatgctcccactgcagaaacaccctgaatcattccctt 1362
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>ref|NM_180021.2| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+)
            AT2G41540 transcript variant AT2G41540.2 mRNA, complete
            cds
          Length = 3028

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 464  aaaatgcaccaacagcagaaataccctgaatcatcccctt 503
            ||||||| || || ||||||| |||||||||||| |||||
Sbjct: 1621 aaaatgctcccactgcagaaacaccctgaatcattccctt 1582
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>ref|XM_323660.1| Neurospora crassa OR74A predicted protein (NCU04321.1) partial mRNA
          Length = 4395

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  agccgaggtcacggcttccc 236
            ||||||||||||||||||||
Sbjct: 1212 agccgaggtcacggcttccc 1231
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>ref|XM_955874.1| Neurospora crassa OR74A hypothetical protein (NCU04321.1) partial
            mRNA
          Length = 4395

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  agccgaggtcacggcttccc 236
            ||||||||||||||||||||
Sbjct: 1212 agccgaggtcacggcttccc 1231
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>emb|BX927107.9| Zebrafish DNA sequence from clone CH211-281H20 in linkage group 7,
            complete sequence
          Length = 135772

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   tccaaatttccaaacacaca 97
            ||||||||||||||||||||
Sbjct: 3644 tccaaatttccaaacacaca 3663
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>ref|XM_810831.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508739.30) partial mRNA
          Length = 996

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 caaaaaatgcaccaacagca 480
           ||||||||||||||||||||
Sbjct: 207 caaaaaatgcaccaacagca 188
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>ref|XM_810833.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508739.50) partial mRNA
          Length = 2817

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 461  caaaaaatgcaccaacagca 480
            ||||||||||||||||||||
Sbjct: 1590 caaaaaatgcaccaacagca 1571
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>ref|XM_797493.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509135.9) partial mRNA
          Length = 1893

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 461  caaaaaatgcaccaacagca 480
            ||||||||||||||||||||
Sbjct: 1584 caaaaaatgcaccaacagca 1565
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>gb|AC158532.2| Mus musculus BAC clone RP23-178C22 from chromosome 14, complete
             sequence
          Length = 188421

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 74    ggggtccaaatttccaaacacacaagcc 101
             |||| |||||| ||||||||||||||||
Sbjct: 62668 ggggaccaaatatccaaacacacaagcc 62695
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>emb|AL356772.14| Human DNA sequence from clone RP11-47B24 on chromosome 10, complete
              sequence
          Length = 163861

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 457    agctcaaaaaatgcaccaac 476
              ||||||||||||||||||||
Sbjct: 136041 agctcaaaaaatgcaccaac 136022
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>gb|AY091247.1| Arabidopsis thaliana putative glycerol-3-phosphate dehydrogenase
            (At2g41540) mRNA, complete cds
          Length = 1420

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 464  aaaatgcaccaacagcagaaataccctgaatcatcccctt 503
            ||||||| || || ||||||| |||||||||||| |||||
Sbjct: 1150 aaaatgctcccactgcagaaacaccctgaatcattccctt 1111
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>gb|AY063920.1| Arabidopsis thaliana putative glycerol-3-phosphate dehydrogenase
            (At2g41540) mRNA, complete cds
          Length = 2023

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 464  aaaatgcaccaacagcagaaataccctgaatcatcccctt 503
            ||||||| || || ||||||| |||||||||||| |||||
Sbjct: 1559 aaaatgctcccactgcagaaacaccctgaatcattccctt 1520
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>emb|BX294026.1|NCB7H23 Neurospora crassa DNA linkage group V BAC contig B7H23
          Length = 114377

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   agccgaggtcacggcttccc 236
             ||||||||||||||||||||
Sbjct: 71870 agccgaggtcacggcttccc 71889
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>gb|AC113190.8| Homo sapiens chromosome 15, clone RP11-186H10, complete sequence
          Length = 161765

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    cacagttcagcaggagccac 407
              ||||||||||||||||||||
Sbjct: 155034 cacagttcagcaggagccac 155053
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>gb|AC112706.2| Homo sapiens chromosome 19 clone CTD-3195E18, complete sequence
          Length = 65069

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   gccacttgcttgttttcctc 422
             ||||||||||||||||||||
Sbjct: 59660 gccacttgcttgttttcctc 59679
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>gb|AC011505.6| Homo sapiens chromosome 19 clone CTD-2081K17, complete sequence
          Length = 167417

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 488   cctgaatcatcccctttcct 507
             ||||||||||||||||||||
Sbjct: 31174 cctgaatcatcccctttcct 31155
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>gb|AC092074.3| Homo sapiens chromosome 19 clone X200282, complete sequence
          Length = 38986

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   gccacttgcttgttttcctc 422
             ||||||||||||||||||||
Sbjct: 34791 gccacttgcttgttttcctc 34810
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>emb|AL808027.14| Mouse DNA sequence from clone RP23-161B9 on chromosome 2, complete
              sequence
          Length = 241914

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 315    cagggcttggaggatgtctctcac 338
              ||||||||||||||||| ||||||
Sbjct: 187491 cagggcttggaggatgtttctcac 187468
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>emb|BX820067.1|CNS0AAG2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS70ZB08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1819

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 464  aaaatgcaccaacagcagaaataccctgaatcatcccctt 503
            ||||||| || || ||||||| |||||||||||| |||||
Sbjct: 1335 aaaatgctcccactgcagaaacaccctgaatcattccctt 1296
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>emb|BX323808.7| Zebrafish DNA sequence from clone DKEY-117N4, complete sequence
          Length = 152686

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   tccaaatttccaaacacaca 97
            ||||||||||||||||||||
Sbjct: 3644 tccaaatttccaaacacaca 3663
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>gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, complete sequence
          Length = 202863

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    agccacttgcttgttttcct 421
              ||||||||||||||||||||
Sbjct: 107381 agccacttgcttgttttcct 107362
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>gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 map 7, complete sequence
          Length = 199260

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    agccacttgcttgttttcct 421
              ||||||||||||||||||||
Sbjct: 104734 agccacttgcttgttttcct 104753
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>gb|AC005319.1|AC005319 Human Chromosome 15q26.1 PAC clone pDJ430i19, complete sequence
          Length = 118741

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   cacagttcagcaggagccac 407
             ||||||||||||||||||||
Sbjct: 98818 cacagttcagcaggagccac 98799
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>emb|AJ347019.1|ATH347019 Arabidopsis thaliana mRNA for glycerol-3-phosphate dehydrogenase
            (gpdhc gene)
          Length = 1708

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 464  aaaatgcaccaacagcagaaataccctgaatcatcccctt 503
            ||||||| || || ||||||| |||||||||||| |||||
Sbjct: 1305 aaaatgctcccactgcagaaacaccctgaatcattccctt 1266
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>gb|AC005379.1|AC005379 Homo sapiens chromosome 19, cosmid R32603, complete sequence
          Length = 45617

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 403  gccacttgcttgttttcctc 422
            ||||||||||||||||||||
Sbjct: 1171 gccacttgcttgttttcctc 1190
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>emb|AL845447.3| Mouse DNA sequence from clone RP23-133L20 on chromosome X, complete
             sequence
          Length = 105525

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   tttacaatctaatcatgtac 209
             ||||||||||||||||||||
Sbjct: 36032 tttacaatctaatcatgtac 36051


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,584,343
Number of Sequences: 3902068
Number of extensions: 4584343
Number of successful extensions: 84911
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84804
Number of HSP's gapped (non-prelim): 107
length of query: 602
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 579
effective length of database: 17,143,297,704
effective search space: 9925969370616
effective search space used: 9925969370616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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