ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18h18 |
|---|---|
| Clone Library Name | barley_pub |
>LCYE_LYCES (O65837) Lycopene epsilon cyclase, chloroplast precursor (EC| 1.14.-.-) Length = 526 Score = 332 bits (851), Expect(2) = 1e-90 Identities = 165/217 (76%), Positives = 188/217 (86%) Frame = -1 Query: 713 PTFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPV 534 PTFLYAM MS TRVFFEETCLASKDAMPFDLLKK+LM RL+ +GVRI ++YEEEWSYIPV Sbjct: 301 PTFLYAMPMSPTRVFFEETCLASKDAMPFDLLKKKLMLRLNTLGVRIKEIYEEEWSYIPV 360 Query: 533 GGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGNRVYSGQYLPGS 354 GGSLPNT+QK LAFGAAASMVHPATGYSVVRSLSEAP+ ASV+++IL R + + + S Sbjct: 361 GGSLPNTEQKTLAFGAAASMVHPATGYSVVRSLSEAPKCASVLANIL--RQHYSKNMLTS 418 Query: 353 SEMSSPSMLAWGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRGFL 174 S + S S AW TLWPQERKRQRSFFLFGLALI+QLD EGI++FF FFR+PKWMW+GFL Sbjct: 419 SSIPSISTQAWNTLWPQERKRQRSFFLFGLALILQLDIEGIRSFFRAFFRVPKWMWQGFL 478 Query: 173 GSTLSSVDLMLFALYMFAIAPNNLRMNLVRHLLSDPT 63 GS+LSS DLMLFA YMF IAPN++R L+RHLLSDPT Sbjct: 479 GSSLSSADLMLFAFYMFIIAPNDMRKGLIRHLLSDPT 515 Score = 21.6 bits (44), Expect(2) = 1e-90 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -3 Query: 69 PHGSAMIRTYLT 34 P G+ +IRTYLT Sbjct: 514 PTGATLIRTYLT 525
>LCYE_ARATH (Q38932) Lycopene epsilon cyclase, chloroplast precursor (EC| 1.14.-.-) Length = 524 Score = 326 bits (835), Expect = 5e-89 Identities = 160/217 (73%), Positives = 181/217 (83%) Frame = -1 Query: 713 PTFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPV 534 PTFLYAM M+ +R+FFEETCLASKD MPFDLLK +LM RLD +G+RILK YEEEWSYIPV Sbjct: 304 PTFLYAMPMTKSRLFFEETCLASKDVMPFDLLKTKLMLRLDTLGIRILKTYEEEWSYIPV 363 Query: 533 GGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGNRVYSGQYLPGS 354 GGSLPNT+QKNLAFGAAASMVHPATGYSVVRSLSEAP+YASVI++IL Sbjct: 364 GGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIAEILREET-------TK 416 Query: 353 SEMSSPSMLAWGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRGFL 174 S+ S AW TLWP ERKRQR+FFLFGLALI+Q D EGI++FF TFFRLPKWMW+GFL Sbjct: 417 QINSNISRQAWDTLWPPERKRQRAFFLFGLALIVQFDTEGIRSFFRTFFRLPKWMWQGFL 476 Query: 173 GSTLSSVDLMLFALYMFAIAPNNLRMNLVRHLLSDPT 63 GSTL+S DL+LFALYMF I+PNNLR L+ HL+SDPT Sbjct: 477 GSTLTSGDLVLFALYMFVISPNNLRKGLINHLISDPT 513
>LCYB_LYCES (Q43503) Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-)| Length = 500 Score = 164 bits (414), Expect = 3e-40 Identities = 89/227 (39%), Positives = 132/227 (58%), Gaps = 12/227 (5%) Frame = -1 Query: 713 PTFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPV 534 PTFLYAM SS R+F EET L ++ + D +++R+++RL+ +G+++ + E+E IP+ Sbjct: 281 PTFLYAMPFSSNRIFLEETSLVARPGLRIDDIQERMVARLNHLGIKVKSIEEDEHCLIPM 340 Query: 533 GGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGN-RVYSGQYLPG 357 GG LP Q+ + G A MVHP+TGY V R+L+ AP A+ I LG+ R +SG L Sbjct: 341 GGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPVVANAIIQYLGSERSHSGNEL-- 398 Query: 356 SSEMSSPSMLAWGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRGF 177 S W LWP ER+RQR FF FG+ ++++LD + FF+ FF L W GF Sbjct: 399 -------STAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGF 451 Query: 176 LGSTLSSVDLMLFALYMFAIAPNNLR-----------MNLVRHLLSD 69 L S L +L++F L +F+ A N R +N++ +LL D Sbjct: 452 LSSRLFLPELIVFGLSLFSHASNTSRFEIMTKGTVPLVNMINNLLQD 498
>LCYB_NARPS (Q40424) Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-)| Length = 503 Score = 162 bits (411), Expect = 7e-40 Identities = 86/211 (40%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Frame = -1 Query: 713 PTFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPV 534 PTFLYAM SS R+F EET L ++ + + +++R+++RL+ +G+RI + E+E IP+ Sbjct: 284 PTFLYAMPFSSNRIFLEETSLVARPGLKMEDIQERMVARLNHLGIRIKSIEEDERCVIPM 343 Query: 533 GGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGNRVYSGQYLPGS 354 GG LP Q+ + G A MVHP+TGY V R+L+ AP A+ I QYL Sbjct: 344 GGPLPVIPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIV----------QYLVSD 393 Query: 353 SEMSSPSMLA--WGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRG 180 S +S + A W LWP ER+RQR FF FG+ ++++LD EG + FF+ FF L W G Sbjct: 394 SGLSGNDLSADVWKDLWPIERRRQREFFCFGMDILLKLDLEGTRRFFDAFFDLEPRYWHG 453 Query: 179 FLGSTLSSVDLMLFALYMFAIAPNNLRMNLV 87 FL S L +L+ F L +F+ A N ++ ++ Sbjct: 454 FLSSRLFLPELVPFGLSLFSHASNTCKLEIM 484
>LCYB_CAPAN (Q43415) Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-)| Length = 498 Score = 161 bits (407), Expect = 2e-39 Identities = 84/210 (40%), Positives = 125/210 (59%), Gaps = 1/210 (0%) Frame = -1 Query: 713 PTFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPV 534 PTFLYAM SS R+F EET L ++ + D +++R+++RL +G+++ + E+E IP+ Sbjct: 279 PTFLYAMPFSSNRIFLEETSLVARPGLGMDDIQERMVARLSHLGIKVKSIEEDEHCVIPM 338 Query: 533 GGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGN-RVYSGQYLPG 357 GG LP Q+ + G A MVHP+TGY V R+L+ AP A+ I L + R +SG L Sbjct: 339 GGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPVVANAIIQYLSSERSHSGDEL-- 396 Query: 356 SSEMSSPSMLAWGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRGF 177 S W LWP ER+RQR FF FG+ ++++LD + FF+ FF L W GF Sbjct: 397 -------SAAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGF 449 Query: 176 LGSTLSSVDLMLFALYMFAIAPNNLRMNLV 87 L S L +L++F L +F+ A N R+ ++ Sbjct: 450 LSSRLFLPELIVFGLSLFSHASNTSRLEIM 479
>LCYB_ARATH (Q38933) Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-)| Length = 501 Score = 160 bits (405), Expect = 4e-39 Identities = 82/211 (38%), Positives = 126/211 (59%), Gaps = 2/211 (0%) Frame = -1 Query: 713 PTFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPV 534 PTFLYAM SS R+F EET L ++ + + +++R+ +RL +G+ + ++ E+E IP+ Sbjct: 280 PTFLYAMPFSSNRIFLEETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPM 339 Query: 533 GGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGNRVYSGQYLPGS 354 GG LP Q+ + G A MVHP+TGY V R+L+ AP A+ I LG+ P S Sbjct: 340 GGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRYLGS--------PSS 391 Query: 353 SEMSSPSMLA--WGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRG 180 + + + A W LWP ER+RQR FF FG+ ++++LD + + FF+ FF L W G Sbjct: 392 NSLRGDQLSAEVWRDLWPIERRRQREFFCFGMDILLKLDLDATRRFFDAFFDLQPHYWHG 451 Query: 179 FLGSTLSSVDLMLFALYMFAIAPNNLRMNLV 87 FL S L +L++F L +F+ A N R+ ++ Sbjct: 452 FLSSRLFLPELLVFGLSLFSHASNTSRLEIM 482
>LCYB_TOBAC (Q43578) Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-)| Length = 500 Score = 158 bits (399), Expect = 2e-38 Identities = 88/226 (38%), Positives = 134/226 (59%), Gaps = 11/226 (4%) Frame = -1 Query: 713 PTFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPV 534 PTFLYAM SS ++F EET L ++ + D +++R+++RL+ +G+++ + E+E IP+ Sbjct: 281 PTFLYAMPFSSNKIFLEETSLVARPGLRMDDIQERMVARLNHLGIKVKSIEEDEHCVIPM 340 Query: 533 GGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGNRVYSGQYLPGS 354 GGSLP Q+ + G A +VHP+TGY V R+L+ AP A+ I LG S + L G Sbjct: 341 GGSLPVIPQRVVGTGGTAGLVHPSTGYMVARTLAAAPVVANAIIHYLG----SEKDLLG- 395 Query: 353 SEMSSPSMLAWGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRGFL 174 +E+S+ W LWP ER+RQR FF FG+ ++++LD + FF+ FF L W GFL Sbjct: 396 NELSA---AVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFL 452 Query: 173 GSTLSSVDLMLFALYMFAIAPNNLR-----------MNLVRHLLSD 69 S L +L+ F L +F+ A N R +N++ +LL D Sbjct: 453 SSRLYLPELIFFGLSLFSRASNTSRIEIMTKGTLPLVNMINNLLQD 498
>CCS_CITSI (Q9SEA0) Capsanthin/capsorubin synthase, chloroplast precursor (EC| 5.3.99.8) Length = 503 Score = 155 bits (393), Expect = 9e-38 Identities = 82/210 (39%), Positives = 123/210 (58%), Gaps = 1/210 (0%) Frame = -1 Query: 713 PTFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPV 534 PTFLYAM S VF EET L S+ + + +K R+ +RL MG+R+ +V E+E IP+ Sbjct: 284 PTFLYAMPFDSNLVFLEETSLVSRPVLSYKEVKSRMAARLRHMGIRVKRVIEDEKCLIPM 343 Query: 533 GGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGN-RVYSGQYLPG 357 GG LP Q +A G + ++HPATGY V R+++ AP A I++ LG+ R+ G+ L Sbjct: 344 GGPLPVIPQSVMAIGGTSGLIHPATGYMVARTMALAPALADAIAECLGSTRMIRGRPL-- 401 Query: 356 SSEMSSPSMLAWGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRGF 177 W LWP +R+ R F+ FG+ +++LD +G + FF+ FF L + W GF Sbjct: 402 -------HQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGF 454 Query: 176 LGSTLSSVDLMLFALYMFAIAPNNLRMNLV 87 L S LS +L +L +F A N+ R+++V Sbjct: 455 LSSRLSLAELAGLSLSLFGHASNSSRLDIV 484
>CCS_CAPAN (Q42435) Capsanthin/capsorubin synthase, chloroplast precursor (EC| 5.3.99.8) Length = 498 Score = 147 bits (370), Expect = 4e-35 Identities = 80/212 (37%), Positives = 119/212 (56%), Gaps = 3/212 (1%) Frame = -1 Query: 713 PTFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPV 534 PTFLYAM VF EET L S+ + + +K+R+++RL +G+++ V EEE I + Sbjct: 279 PTFLYAMPFDRNLVFLEETSLVSRPMLSYMEVKRRMVARLRHLGIKVRSVLEEEKCVITM 338 Query: 533 GGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGNRVYSGQYLPGS 354 GG LP Q +A G + +VHP++GY V RS++ AP A I + L GS Sbjct: 339 GGPLPRIPQNVMAIGGTSGIVHPSSGYMVARSMALAPVLAEAIVESL-----------GS 387 Query: 353 SEMSSPSML---AWGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRLPKWMWR 183 + M S L W LWP +R+R R + FG+ +++LD EG + F+ FF + W Sbjct: 388 TRMIRGSQLYHRVWNGLWPSDRRRVRECYCFGMETLLKLDLEGTRRLFDAFFDVDPKYWH 447 Query: 182 GFLGSTLSSVDLMLFALYMFAIAPNNLRMNLV 87 GFL S LS +L + +LY+F A N R+++V Sbjct: 448 GFLSSRLSVKELAVLSLYLFGHASNLARLDIV 479
>LCYB_SYNP7 (Q55276) Lycopene beta cyclase (EC 1.14.-.-)| Length = 411 Score = 144 bits (364), Expect = 2e-34 Identities = 83/209 (39%), Positives = 115/209 (55%) Frame = -1 Query: 713 PTFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPV 534 PTFLYAM + + F EET LA+ A+P+D LK+RL RL GV + + EE+ P+ Sbjct: 194 PTFLYAMDLGNDVYFVEETSLAACPAIPYDRLKQRLYQRLATRGVTVQVIQHEEYCLFPM 253 Query: 533 GGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGNRVYSGQYLPGS 354 LP+ Q + FG AASMVHPA+GY V L AP L N + +G S Sbjct: 254 NLPLPDLTQSVVGFGGAASMVHPASGYMVGALLRRAPD--------LANAIAAGLNASSS 305 Query: 353 SEMSSPSMLAWGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRGFL 174 + + AW LWP E+ R+ + FGL +++ + F+TFF LPK W GFL Sbjct: 306 LTTAELATQAWRGLWPTEKIRKHYIYQFGLEKLMRFSEAQLNHHFQTFFGLPKEQWYGFL 365 Query: 173 GSTLSSVDLMLFALYMFAIAPNNLRMNLV 87 +TLS +L+ L +FA APN++R L+ Sbjct: 366 TNTLSLPELIQAMLRLFAQAPNDVRWGLM 394
>Y801_DEIRA (Q9RW68) Putative carotenoid cyclase DR0801| Length = 410 Score = 111 bits (278), Expect = 2e-24 Identities = 71/215 (33%), Positives = 100/215 (46%) Frame = -1 Query: 710 TFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPVG 531 TFLYAM + R F EET L ++ A L++RL++RL A G EEW P+ Sbjct: 195 TFLYAMHLGGDRYFVEETSLIARPAPTRAELRRRLLARLSAQGTPPHATESEEWVAFPMN 254 Query: 530 GSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGNRVYSGQYLPGSS 351 P LA+GAAA VHP +G+ V +LS+AP A+ I+ L Sbjct: 255 AQAPAPGGV-LAYGAAAGRVHPVSGFQVAGALSDAPGVATAIATAL-------------C 300 Query: 350 EMSSPSMLAWGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRGFLG 171 + + W LW ER+ R L G+ ++ L+ + FF TFF LP+ W FL Sbjct: 301 QGKDAAAAGWAALWSPERRAAREVHLLGVGALLGLERAELPHFFGTFFGLPREQWARFLH 360 Query: 170 STLSSVDLMLFALYMFAIAPNNLRMNLVRHLLSDP 66 + L L +FA +R+ L R L+ P Sbjct: 361 PDTDAGTLARTMLRVFAQTGGRVRLPLARAALAQP 395
>CRTY_PANAN (P21687) Lycopene cyclase| Length = 382 Score = 38.9 bits (89), Expect = 0.016 Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%) Frame = -1 Query: 707 FLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPV-- 534 F+Y++ +S TR+ E+T + + ++ + G ++ + EE +P+ Sbjct: 185 FVYSLPLSPTRLLIEDTHYIDNATLDPECARQNICDYAAQQGWQLQTLLREEQGALPITL 244 Query: 533 -GGSLPNTDQKNLAF-GAAASMVHPATGYSVVRSLSEAPRYASV 408 G + Q+ LA G A + HP TGYS+ +++ A R +++ Sbjct: 245 SGNADAFWQQRPLACSGLRAGLFHPTTGYSLPLAVAVADRLSAL 288
>CRTY_ENTAG (Q01331) Lycopene cyclase| Length = 386 Score = 33.1 bits (74), Expect = 0.88 Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 13/113 (11%) Frame = -1 Query: 707 FLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYEEEWSYIPVGG 528 F+Y + +S+ + E+T A+ + L++ + + G ++ ++ EE +P+ Sbjct: 182 FVYTLPLSADTLLIEDTRYANVPQRDDNALRQTVTDYAHSKGWQLAQLEREETGCLPI-- 239 Query: 527 SLPNTDQKNLA-------FGAAASMVHPATGYS------VVRSLSEAPRYASV 408 +L Q A G A + HP TGYS + +++++PR SV Sbjct: 240 TLAGDIQALWADAPGVPRSGMRAGLFHPTTGYSLPLAVALADAIADSPRLGSV 292
>TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 32.0 bits (71), Expect = 2.0 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 2/122 (1%) Frame = -1 Query: 467 PATGYSVVRSLSEAPRYASVISDILGNRVYSGQYLPGSSEMSSPSMLAWGTLWPQERKRQ 288 P ++ R + P Y S + + G +LP S+ +S + T+W +E+ Sbjct: 444 PCRTKNIAREIPPQPWYKSTVIHMT-----VGGFLPFSA-ISVELYYIFATVWGREQYTL 497 Query: 287 RS--FFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRGFLGSTLSSVDLMLFALYMFAIA 114 FF+F + L + T+F+ +W WR L + + + L++++ +A Sbjct: 498 YGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARR 557 Query: 113 PN 108 N Sbjct: 558 SN 559
>TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 32.0 bits (71), Expect = 2.0 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 2/122 (1%) Frame = -1 Query: 467 PATGYSVVRSLSEAPRYASVISDILGNRVYSGQYLPGSSEMSSPSMLAWGTLWPQERKRQ 288 P ++ R + P Y S + + G +LP S+ +S + T+W +E+ Sbjct: 444 PCRTKNIAREIPPQPWYKSTVIHMT-----VGGFLPFSA-ISVELYYIFATVWGREQYTL 497 Query: 287 RS--FFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRGFLGSTLSSVDLMLFALYMFAIA 114 FF+F + L + T+F+ +W WR L + + + L++++ +A Sbjct: 498 YGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARR 557 Query: 113 PN 108 N Sbjct: 558 SN 559
>TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member 1 precursor| (hMP70) Length = 606 Score = 32.0 bits (71), Expect = 2.0 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 2/122 (1%) Frame = -1 Query: 467 PATGYSVVRSLSEAPRYASVISDILGNRVYSGQYLPGSSEMSSPSMLAWGTLWPQERKRQ 288 P ++ R + P Y S + + G +LP S+ +S + T+W +E+ Sbjct: 444 PCRTKNIAREIPPQPWYKSTVIHMT-----VGGFLPFSA-ISVELYYIFATVWGREQYTL 497 Query: 287 RS--FFLFGLALIIQLDNEGIQTFFETFFRLPKWMWRGFLGSTLSSVDLMLFALYMFAIA 114 FF+F + L + T+F+ +W WR L + + + L++++ +A Sbjct: 498 YGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARR 557 Query: 113 PN 108 N Sbjct: 558 SN 559
>CENG3_MOUSE (Q8VHH5) Centaurin-gamma 3 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 3) (AGAP-3) (MR1-interacting protein) (MRIP-1) (CRAM-associated GTPase) (CRAG) Length = 910 Score = 31.6 bits (70), Expect = 2.6 Identities = 22/68 (32%), Positives = 32/68 (47%) Frame = -1 Query: 527 SLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGNRVYSGQYLPGSSE 348 S+ +TDQ + A ASM HPA+G SLS +P+ S + + G+ G+ Sbjct: 534 SVSSTDQWSEAAALPASMQHPASG--PAESLSSSPKLEPPPSPHSNRKKHRGKKSTGTPR 591 Query: 347 MSSPSMLA 324 PS A Sbjct: 592 PDGPSSAA 599
>Y1515_PYRHO (O59184) Hypothetical protein PH1515| Length = 391 Score = 31.2 bits (69), Expect = 3.3 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 8/56 (14%) Frame = -1 Query: 314 LWPQERKRQRSFFLFGLAL-IIQLDNEGIQTFFETFFRLPKWM-------WRGFLG 171 +WP ERK +R +G L ++++ + GI TF + +F + + RGFLG Sbjct: 55 IWPAERKLKRKEVYWGAKLALLEMVHSGISTFVDMYFYMEEVARATLEVGLRGFLG 110
>CAPP_PROMM (Q7V561) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 1004 Score = 31.2 bits (69), Expect = 3.3 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 5/92 (5%) Frame = -1 Query: 359 GSSEMSSPSMLAWGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRL-PKWMWR 183 G+ ++SS + W W Q R S+F G AL +++++ Q + RL +W + Sbjct: 811 GAKDLSSLRAIPWVFGWTQSRFLLPSWFGVGTALAAEVESDADQ--LDLLRRLHQRWPFF 868 Query: 182 GFLGS----TLSSVDLMLFALYMFAIAPNNLR 99 L S TLS VDL L YM ++ + R Sbjct: 869 RMLISKVEMTLSKVDLDLAHHYMTSLGREDYR 900
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 30.8 bits (68), Expect = 4.4 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 5/38 (13%) Frame = -1 Query: 593 DAMGV-----RILKVYEEEWSYIPVGGSLPNTDQKNLA 495 DA+GV R L +++ EW ++ G LPNT Q +LA Sbjct: 203 DALGVSRSCLRSLGLFQGEWVWVARVGELPNTSQPHLA 240
>AROC_ZYMMO (Q5NLU3) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 358 Score = 30.4 bits (67), Expect = 5.7 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%) Frame = -1 Query: 653 LASKDAMPFDLLKKRLMSRL-----DAMGVRILK-VYEEEWSYIPVGGSLPNTDQKNLAF 492 L+ KD PF +K SR +A V+IL V+E + P+ + NTDQ++ + Sbjct: 36 LSEKDIQPFLDRRKPGSSRFTTQRREADAVKILSGVFEGRTTGTPISLMIENTDQRSRDY 95 Query: 491 GAAASMVHPATG 456 A PA G Sbjct: 96 SNVAQQYRPAHG 107
>PHY1_CERPU (P25848) Light-sensor Protein kinase [Includes: Phytochrome;| Protein kinase (EC 2.7.11.1)] Length = 1307 Score = 29.6 bits (65), Expect = 9.7 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Frame = +2 Query: 266 IQRGRMSVDVSVLE-----AIVFPMQALMDWTFQNFQANIVQNRHDFLRYQISQKHILEL 430 IQRGR + V + + FP++++ ++ Q F + N H L Q+ +KHIL Sbjct: 351 IQRGRKLWGLVVCQHTSPRTVPFPLRSVCEFLMQVFGMQL--NLHVELAAQLREKHILRT 408 Query: 431 QT 436 QT Sbjct: 409 QT 410
>RECA_RHOBA (Q7UJJ0) Protein recA (Recombinase A)| Length = 375 Score = 29.6 bits (65), Expect = 9.7 Identities = 16/37 (43%), Positives = 24/37 (64%) Frame = +1 Query: 28 LQGQVGPDHC*TVGSERRCLTRFIRKLFGAIANM*SA 138 L+G++G H VG + R +++ +RKL GAIA SA Sbjct: 177 LEGEIGDSH---VGLQARLMSQSMRKLTGAIAKSKSA 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 114,983,201 Number of Sequences: 219361 Number of extensions: 2562494 Number of successful extensions: 6730 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 6505 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6713 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7366267610 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
