ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18h04 |
|---|---|
| Clone Library Name | barley_pub |
>CHI1_THECC (Q41596) Endochitinase 1 precursor (EC 3.2.1.14)| Length = 321 Score = 57.4 bits (137), Expect = 1e-08 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGLAV 98 RIGFYKR C G+GYGNNLDCYNQ S+N G +V Sbjct: 285 RIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPSV 318
>CHI2_GOSHI (Q39785) Endochitinase 2 precursor (EC 3.2.1.14) (Fragment)| Length = 302 Score = 55.5 bits (132), Expect = 4e-08 Identities = 23/34 (67%), Positives = 26/34 (76%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGLAV 98 RIGFYKR C I G+ YGNNLDCYNQ F G++V Sbjct: 266 RIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSV 299
>CHI1_GOSHI (Q39799) Endochitinase 1 precursor (EC 3.2.1.14)| Length = 324 Score = 55.5 bits (132), Expect = 4e-08 Identities = 23/34 (67%), Positives = 26/34 (76%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGLAV 98 RIGFYKR C I G+ YGNNLDCYNQ F G++V Sbjct: 288 RIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSV 321
>CHI2_PEA (P21226) Endochitinase A2 precursor (EC 3.2.1.14)| Length = 324 Score = 53.9 bits (128), Expect = 1e-07 Identities = 23/32 (71%), Positives = 25/32 (78%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGL 104 RIGFYKR C IFGIGYG+NLDCY+Q F L Sbjct: 280 RIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSL 311
>CHIC_SECCE (Q9FRV0) Basic endochitinase C precursor (EC 3.2.1.14) (Rye seed| chitinase-c) (RSC-c) Length = 266 Score = 52.4 bits (124), Expect = 3e-07 Identities = 21/28 (75%), Positives = 23/28 (82%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSF 116 RIGFYKR C I G+GYG+NLDCYNQ F Sbjct: 238 RIGFYKRYCDILGVGYGDNLDCYNQRPF 265
>CHI2_HORVU (P23951) 26 kDa endochitinase 2 precursor (EC 3.2.1.14) (CHI-26)| Length = 266 Score = 52.4 bits (124), Expect = 3e-07 Identities = 21/28 (75%), Positives = 23/28 (82%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSF 116 RIGFYKR C I G+GYGNNLDCY+Q F Sbjct: 238 RIGFYKRYCDILGVGYGNNLDCYSQRPF 265
>CHI1_HORVU (P11955) 26 kDa endochitinase 1 precursor (EC 3.2.1.14)| Length = 318 Score = 52.4 bits (124), Expect = 3e-07 Identities = 21/28 (75%), Positives = 23/28 (82%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSF 116 RIGFYKR C I G+GYGNNLDCY+Q F Sbjct: 290 RIGFYKRYCDILGVGYGNNLDCYSQRPF 317
>CHIA_SECCE (Q9FRV1) Basic endochitinase A precursor (EC 3.2.1.14) (Rye seed| chitinase-a) (RSC-a) Length = 321 Score = 51.2 bits (121), Expect = 7e-07 Identities = 21/28 (75%), Positives = 22/28 (78%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSF 116 RIGFYKR C I +GYGNNLDCYNQ F Sbjct: 293 RIGFYKRYCDILRVGYGNNLDCYNQRPF 320
>CHIT_PHAVU (P06215) Endochitinase precursor (EC 3.2.1.14)| Length = 328 Score = 50.8 bits (120), Expect = 9e-07 Identities = 20/32 (62%), Positives = 24/32 (75%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGL 104 RIGF+KR C + G+GYGNNLDCY+Q F L Sbjct: 288 RIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSL 319
>CHI5_PHAVU (P36361) Endochitinase CH5B precursor (EC 3.2.1.14)| Length = 327 Score = 50.8 bits (120), Expect = 9e-07 Identities = 20/32 (62%), Positives = 24/32 (75%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGL 104 RIGF+KR C + G+GYGNNLDCY+Q F L Sbjct: 287 RIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSL 318
>CHIB_ARATH (P19171) Basic endochitinase B precursor (EC 3.2.1.14)| (Pathogenesis-related protein 3) (PR-3) (AtChiB) Length = 335 Score = 50.1 bits (118), Expect = 2e-06 Identities = 22/32 (68%), Positives = 24/32 (75%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGL 104 RIGFY+R C IFG+ G NLDCYNQ SF GL Sbjct: 299 RIGFYQRYCNIFGVNPGGNLDCYNQRSFVNGL 330
>CHI3_TOBAC (P29059) Endochitinase 3 precursor (EC 3.2.1.14)| Length = 334 Score = 48.9 bits (115), Expect = 4e-06 Identities = 20/35 (57%), Positives = 26/35 (74%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGLAVQ 95 RIGFY+R C I G+ G+N+DC NQ SFN GL ++ Sbjct: 298 RIGFYRRYCSILGVSPGDNIDCGNQKSFNSGLLLE 332
>CHIB_VITVI (P51613) Basic endochitinase precursor (EC 3.2.1.14)| Length = 314 Score = 48.5 bits (114), Expect = 5e-06 Identities = 21/32 (65%), Positives = 22/32 (68%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGL 104 RIGFYKR C I + YGNNLDC NQ F GL Sbjct: 278 RIGFYKRYCDILRVSYGNNLDCNNQRPFGSGL 309
>CHI1_ORYSA (P24626) Basic endochitinase 1 precursor (EC 3.2.1.14)| Length = 320 Score = 47.8 bits (112), Expect = 8e-06 Identities = 18/25 (72%), Positives = 21/25 (84%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQ 125 RIGFYKR C + G+ YG+NLDCYNQ Sbjct: 290 RIGFYKRYCDMLGVSYGDNLDCYNQ 314
>CHI2_TOBAC (P24091) Endochitinase B precursor (EC 3.2.1.14) (CHN-B)| Length = 324 Score = 47.4 bits (111), Expect = 1e-05 Identities = 21/34 (61%), Positives = 24/34 (70%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGLAV 98 RIGFY+R C I G+ G+NLDC NQ SF GL V Sbjct: 288 RIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLV 321
>CHI1_TOBAC (P08252) Endochitinase A precursor (EC 3.2.1.14) (CHN-A)| Length = 329 Score = 47.4 bits (111), Expect = 1e-05 Identities = 21/34 (61%), Positives = 24/34 (70%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGLAV 98 RIGFY+R C I G+ G+NLDC NQ SF GL V Sbjct: 293 RIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLV 326
>CHI3_SOLTU (P52405) Endochitinase 3 precursor (EC 3.2.1.14) (Fragment)| Length = 318 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/34 (61%), Positives = 24/34 (70%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGLAV 98 RIGFY+R C I G+ G+NLDC NQ SF GL V Sbjct: 282 RIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLV 315
>CHI1_SOLTU (P52403) Endochitinase 1 precursor (EC 3.2.1.14) (Fragment)| Length = 318 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/34 (61%), Positives = 24/34 (70%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGLAV 98 RIGFY+R C I G+ G+NLDC NQ SF GL V Sbjct: 282 RIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLV 315
>CHI2_SOLTU (P52404) Endochitinase 2 precursor (EC 3.2.1.14) (Fragment)| Length = 316 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/34 (61%), Positives = 24/34 (70%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGLAV 98 RIGFY+R C I G+ G+NLDC NQ SF GL V Sbjct: 280 RIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLV 313
>CHIC_LYCES (Q05538) Basic 30 kDa endochitinase precursor (EC 3.2.1.14)| Length = 322 Score = 46.6 bits (109), Expect = 2e-05 Identities = 21/34 (61%), Positives = 23/34 (67%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGLAV 98 RIGFY+R C I G+ G NLDC NQ SF GL V Sbjct: 286 RIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLV 319
>CHI2_BRANA (Q09023) Endochitinase CH25 precursor (EC 3.2.1.14)| Length = 322 Score = 46.2 bits (108), Expect = 2e-05 Identities = 19/28 (67%), Positives = 21/28 (75%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSF 116 RIGFY+R C I G+ G NLDCYNQ SF Sbjct: 284 RIGFYQRYCNILGVNPGGNLDCYNQRSF 311
>CHIX_PEA (P36907) Endochitinase precursor (EC 3.2.1.14)| Length = 320 Score = 45.8 bits (107), Expect = 3e-05 Identities = 19/28 (67%), Positives = 21/28 (75%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSF 116 R+GFYKR C IFG+ G NLDC NQ SF Sbjct: 292 RVGFYKRYCQIFGVDPGGNLDCNNQRSF 319
>CHI2_ORYSA (P25765) Basic endochitinase 2 precursor (EC 3.2.1.14)| Length = 336 Score = 45.8 bits (107), Expect = 3e-05 Identities = 18/25 (72%), Positives = 20/25 (80%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQ 125 RIGFYKR C I G+ YG NLDCY+Q Sbjct: 292 RIGFYKRYCDILGVSYGANLDCYSQ 316
>CHI6_POPTR (P16579) Acidic endochitinase WIN6 precursor (EC 3.2.1.14)| Length = 340 Score = 45.8 bits (107), Expect = 3e-05 Identities = 19/33 (57%), Positives = 22/33 (66%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGLA 101 RIGFYK+ C G YG+NLDCY Q F GL+ Sbjct: 302 RIGFYKKYCDSLGTTYGSNLDCYQQRPFGYGLS 334
>CHIB_POPTR (P29031) Acidic endochitinase WIN6.2B precursor (EC 3.2.1.14)| Length = 303 Score = 44.3 bits (103), Expect = 9e-05 Identities = 19/32 (59%), Positives = 20/32 (62%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGL 104 RIGFYK C G YG+NLDCY Q F GL Sbjct: 265 RIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGL 296
>CHID_LYCES (Q05537) Basic endochitinase (EC 3.2.1.14) (Fragment)| Length = 246 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/28 (64%), Positives = 20/28 (71%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSF 116 RIGFY+R C I G+ GNNLDC NQ F Sbjct: 218 RIGFYRRYCQILGVDPGNNLDCANQRPF 245
>CHIT_SOLTU (P05315) Endochitinase precursor (EC 3.2.1.14)| Length = 328 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/34 (55%), Positives = 22/34 (64%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIGLAV 98 RIGFY+R C I G+ G+NLDC NQ F L V Sbjct: 292 RIGFYRRYCSILGVTPGDNLDCVNQRWFGNALLV 325
>CHIB_LYCES (Q05540) Acidic 27 kDa endochitinase precursor (EC 3.2.1.14)| Length = 247 Score = 42.0 bits (97), Expect = 4e-04 Identities = 16/28 (57%), Positives = 21/28 (75%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSF 116 RIGFY+R C I + G+NLDCY+Q +F Sbjct: 217 RIGFYRRYCTILNVAPGDNLDCYDQRNF 244
>CHIQ_TOBAC (P17514) Acidic endochitinase Q precursor (EC 3.2.1.14)| (Pathogenesis-related protein Q) (PR-Q) Length = 253 Score = 42.0 bits (97), Expect = 4e-04 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIG 107 RIG+Y+R C + + G NLDCYNQ +F G Sbjct: 223 RIGYYRRYCGMLNVAPGENLDCYNQRNFGQG 253
>CHIP_TOBAC (P17513) Acidic endochitinase P precursor (EC 3.2.1.14)| (Pathogenesis-related protein P) (PR-P) Length = 253 Score = 41.6 bits (96), Expect = 6e-04 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIG 107 RIG+Y+R C + + G+NLDCYNQ +F G Sbjct: 223 RIGYYRRYCGMLNVAPGDNLDCYNQRNFAQG 253
>CHIT_PETHY (P29021) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 254 Score = 38.9 bits (89), Expect = 0.004 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSF 116 RIG+Y+R I + G+NLDCYNQ +F Sbjct: 224 RIGYYRRNVSIMNVAPGDNLDCYNQRNF 251
>CHIA_LYCES (Q05539) Acidic 26 kDa endochitinase precursor (EC 3.2.1.14)| Length = 253 Score = 38.5 bits (88), Expect = 0.005 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIG 107 RIGFY+R C + + G NLDC NQ +F G Sbjct: 223 RIGFYRRYCGMLNVPTGENLDCNNQKNFAQG 253
>CHIA_LYCCI (Q40114) Acidic endochitinase pcht28 precursor (EC 3.2.1.14)| Length = 253 Score = 38.5 bits (88), Expect = 0.005 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSFNIG 107 RIGFY+R C + + G NLDC NQ +F G Sbjct: 223 RIGFYRRYCGMLNVPTGENLDCNNQKNFAQG 253
>CHIP_BETVU (P42820) Acidic endochitinase SP2 precursor (EC 3.2.1.14)| Length = 288 Score = 31.2 bits (69), Expect = 0.78 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDC 134 RI FYK+ C FG+ G+NL C Sbjct: 267 RIQFYKKYCADFGVAPGDNLTC 288
>AGI_URTDI (P11218) Lectin/endochitinase precursor (EC 3.2.1.14) (Agglutinin)| (UDA) Length = 372 Score = 31.2 bits (69), Expect = 0.78 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -3 Query: 196 IGFYKRXCXIFGIGYGNNL 140 IGFYKR C + G+ YG++L Sbjct: 333 IGFYKRYCDMLGVSYGHDL 351
>CHIT_DIOJA (P80052) Acidic endochitinase (EC 3.2.1.14)| Length = 250 Score = 30.0 bits (66), Expect = 1.7 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDC 134 R+G+Y+ C G+ GNNL C Sbjct: 229 RVGYYQEYCAQLGVSPGNNLPC 250
>VG_DROME (Q26366) Protein vestigial| Length = 453 Score = 28.1 bits (61), Expect = 6.6 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 46 HXHTHMHXPRTQSYDLTAPRA 108 H HTH H +T+ DL PR+ Sbjct: 169 HSHTHTHTHQTKEEDLIVPRS 189
>CHI8_POPTR (P16061) Endochitinase WIN8 precursor (EC 3.2.1.14)| Length = 316 Score = 28.1 bits (61), Expect = 6.6 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -3 Query: 199 RIGFYKRXCXIFGIGYGNNLDCYNQLSF 116 RI +Y R C + + G+NL C NQ +F Sbjct: 277 RIDYYLRYCDMLQVDPGDNLYCDNQETF 304
>CAND_DROME (P27398) Calpain D (EC 3.4.22.-) (Calcium-activated neutral| proteinase D) (CANP D) (Small optic lobes protein) Length = 1594 Score = 27.7 bits (60), Expect = 8.6 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +3 Query: 3 HKILTKIIYLXVIXTXTHAHAXTEDP 80 HK+L + IYL V H H EDP Sbjct: 1407 HKMLERDIYLLVCLAFNHWHTGIEDP 1432 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,702,667 Number of Sequences: 219361 Number of extensions: 267975 Number of successful extensions: 547 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 539 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 547 length of database: 80,573,946 effective HSP length: 42 effective length of database: 71,360,784 effective search space used: 1712658816 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
