ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18h02 |
|---|---|
| Clone Library Name | barley_pub |
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like protein)| Length = 797 Score = 104 bits (259), Expect = 1e-22 Identities = 62/129 (48%), Positives = 81/129 (62%), Gaps = 3/129 (2%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFP-QREDGFEMNKPYSNQTASIIDTEVREWVAKAYKR 299 KVT+ YAQ+ +G ++KVG +SF R+ + KPYS TA +ID EVR + AYKR Sbjct: 652 KVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKR 711 Query: 298 TVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQ--GFQDEE 125 TV LLTEKK V +A LLLEKEVL ++D+ +LG RPF AE + Y+ F + G DE+ Sbjct: 712 TVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPF--AEKSTYEEFVEGTGSLDED 769 Query: 124 GKTAEPTKD 98 E KD Sbjct: 770 TSLPEGLKD 778
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 102 bits (255), Expect = 4e-22 Identities = 59/132 (44%), Positives = 83/132 (62%), Gaps = 1/132 (0%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFP-QREDGFEMNKPYSNQTASIIDTEVREWVAKAYKR 299 KVT+ YAQ+ +G ++KVG +SF R+ + KPYS TA +ID EVR ++ AY+R Sbjct: 651 KVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISDAYRR 710 Query: 298 TVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGK 119 TV LLTEKK V +A LLLEKEVL ++D+ ++LG RPF E + Y+ F +G Sbjct: 711 TVALLTEKKADVEKVALLLLEKEVLDKNDMVQLLGPRPF--TEKSTYEEFVEG------- 761 Query: 118 TAEPTKDTEVPD 83 T +DT +P+ Sbjct: 762 TGSLDEDTSLPE 773
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 97.8 bits (242), Expect = 1e-20 Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEM-NKPYSNQTASIIDTEVREWVAKAYKR 299 KVT+ YAQ+ +G S+K+G +SF G M KPYS TA +ID EVR V AY R Sbjct: 518 KVTQSAYAQIVQFGMSEKLGQVSFDFPRQGETMVEKPYSEATAQLIDEEVRCLVRSAYNR 577 Query: 298 TVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGK 119 T++LLT+ +EQV + LLEKEVL + D+ +LG RPF AE + Y+ F +G E Sbjct: 578 TLELLTQCREQVEKVGRRLLEKEVLEKADMIELLGPRPF--AEKSTYEEFVEGTGSLEED 635 Query: 118 TAEP 107 T+ P Sbjct: 636 TSLP 639
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 93.6 bits (231), Expect = 2e-19 Identities = 52/131 (39%), Positives = 78/131 (59%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEMNKPYSNQTASIIDTEVREWVAKAYKRT 296 KVT+M A V G S K+G LSF Q + F++NKP+SN+TA ID EV+ V A++ Sbjct: 637 KVTQMANAMVTSLGMSPKIGYLSFDQNDGNFKVNKPFSNKTARTIDLEVKSIVDDAHRAC 696 Query: 295 VDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKT 116 +LLT+ ++V L+A+ LL KE + ++D+ R+LG RPFK + F+ K Sbjct: 697 TELLTKNLDKVDLVAKELLRKEAITREDMIRLLGPRPFKER--------NEAFE----KY 744 Query: 115 AEPTKDTEVPD 83 +P +TE P+ Sbjct: 745 LDPKSNTEPPE 755
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 85.5 bits (210), Expect = 6e-17 Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 7/134 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEMNKPYSNQTASIIDTEVREWVAKAYKRT 296 KVT M A V G SDK+G +++ +R+D ++ KP+S++T IID+EV V + + R Sbjct: 692 KVTSMATAMVTELGMSDKIGWVNYQKRDDS-DLTKPFSDETGDIIDSEVYRIVQECHDRC 750 Query: 295 VDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAE------LTNYDLFKQGFQ 134 LL EK E V IA++LL+KEVL ++D+ +LG RPF L +Y+ K + Sbjct: 751 TKLLKEKAEDVEKIAQVLLKKEVLTREDMIDLLGKRPFPERNDAFDKYLNDYETEKIRKE 810 Query: 133 DEEG-KTAEPTKDT 95 +E+ K EP T Sbjct: 811 EEKNEKRNEPKPST 824
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 70.9 bits (172), Expect = 2e-12 Identities = 37/132 (28%), Positives = 74/132 (56%), Gaps = 2/132 (1%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEM--NKPYSNQTASIIDTEVREWVAKAYK 302 KVT++ Y+ V +G + +G +SFP+ ++G +P+S ++D E R VAKAY+ Sbjct: 653 KVTRIAYSMVKQFGMAPGIGPISFPEAQEGLMGIGRRPFSQGLQQMMDHEARLLVAKAYR 712 Query: 301 RTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEG 122 T +L + +++ +A LLEKEV++ +D+ ++G P ++ + ++++ Sbjct: 713 HTEKVLQDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAPQRWIDAQREKQD 772 Query: 121 KTAEPTKDTEVP 86 E T++T+ P Sbjct: 773 LGEEETEETQQP 784
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 65.5 bits (158), Expect = 7e-11 Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEMNK--PYSNQTASIIDTEVREWVAKAYK 302 K T++ V V+G SDKVGL F +++ + K + QTA +ID E+ + ++YK Sbjct: 543 KATQLAVQMVKVFGMSDKVGLRDFTAQDNESALVKVSDLAPQTAELIDAEINRVLQESYK 602 Query: 301 RTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFK 179 R +L KK++ L+AE LLE E L D++ RV+ + K Sbjct: 603 RAKVILETKKKEHQLLAEALLEYETLSADEVKRVISGQKIK 643
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 56.6 bits (135), Expect = 3e-08 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 6/101 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSF------PQREDGFEMNKPYSNQTASIIDTEVREWVA 314 +V+++ + +GFS K+G ++ P K YS TA I+D EVRE V Sbjct: 608 QVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVE 667 Query: 313 KAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGD 191 KAYKR +++T + + +A+LL+EKE + ++ + D Sbjct: 668 KAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 708
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 55.8 bits (133), Expect = 5e-08 Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 7/100 (7%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDG-------FEMNKPYSNQTASIIDTEVREWV 317 + T + V +G S+K+G L F Q + G F + YS+Q A ID E++ + Sbjct: 502 RATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAYEIDQEIQRII 561 Query: 316 AKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL 197 + Y+R +LTE ++++ LIA+ LL+ E L + + ++ Sbjct: 562 KECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLI 601
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 55.8 bits (133), Expect = 5e-08 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 4/97 (4%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGF----EMNKPYSNQTASIIDTEVREWVAKA 308 + T + + YG S+K ++ +R G+ ++ + YS T +D EV +A+ Sbjct: 482 RATDIVRKMITDYGMSEKFQNVALTRRGTGYLAEPQLAREYSECTQQYVDEEVARVLAER 541 Query: 307 YKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL 197 Y+ V LLTEKKE + IA LLE+E + +D+ V+ Sbjct: 542 YRAVVALLTEKKELLEYIATRLLERETIERDEFEEVI 578
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 54.3 bits (129), Expect = 2e-07 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 6/101 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSF------PQREDGFEMNKPYSNQTASIIDTEVREWVA 314 +V+++ V +GFS K+G ++ P K YS TA ++D EVRE V Sbjct: 596 QVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVE 655 Query: 313 KAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGD 191 KAY R +++T + + + +A+LL+EKE + ++ + D Sbjct: 656 KAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLFID 696
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 53.5 bits (127), Expect = 3e-07 Identities = 31/109 (28%), Positives = 62/109 (56%), Gaps = 6/109 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEM------NKPYSNQTASIIDTEVREWVA 314 +V ++ V +G SD++G ++ ++ G + ++ +S++TA+ ID EV + V Sbjct: 507 QVARVARQMVTRFGMSDRLGPVALGRQGGGVFLGRDIASDRDFSDETAAAIDEEVSQLVD 566 Query: 313 KAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAEL 167 +AY+R +L E + + +AE+L+EKE + ++L +L + K A L Sbjct: 567 QAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLLANNNAKLALL 615
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 53.1 bits (126), Expect = 3e-07 Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 9/124 (7%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGF-----EMNKPYSNQTASIIDTEVREWVAK 311 K T + + V YG S K+G++S+ F K YS TA +ID EVR + + Sbjct: 535 KATHIARSMVTEYGMSKKLGMVSYEGDHQVFIGRDYGQTKTYSEATAVMIDDEVRRILGE 594 Query: 310 AYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL--GDRPFK--AAELTNYDLFKQ 143 AY R + + +EQ IAE LL+ E L + + G P + AAE+ F++ Sbjct: 595 AYDRAKEAIETHREQHKAIAEALLKYETLDAKQIMSLFKTGKMPDEAAAAEVPEPKTFEE 654 Query: 142 GFQD 131 +D Sbjct: 655 SLKD 658
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 53.1 bits (126), Expect = 3e-07 Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 6/115 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSF-PQREDGF-----EMNKPYSNQTASIIDTEVREWVA 314 + TK+ + V +G S K+G + + + D F YS++ A ID EVR+ + Sbjct: 504 QATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIE 563 Query: 313 KAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLF 149 A+ ++LTE ++ + +A LLEKE LH+ +L + D K LT +D F Sbjct: 564 AAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVE-KRPRLTMFDDF 617
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 53.1 bits (126), Expect = 3e-07 Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 6/115 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSF-PQREDGF-----EMNKPYSNQTASIIDTEVREWVA 314 + TK+ + V +G S K+G + + + D F YS++ A ID EVR+ + Sbjct: 504 QATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIE 563 Query: 313 KAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLF 149 A+ ++LTE ++ + +A LLEKE LH+ +L + D K LT +D F Sbjct: 564 AAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVE-KRPRLTMFDDF 617
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 52.4 bits (124), Expect = 6e-07 Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 6/101 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSF------PQREDGFEMNKPYSNQTASIIDTEVREWVA 314 +V+++ V GFS K+G ++ P K YS TA ++D EVRE V Sbjct: 599 QVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDAEVRELVE 658 Query: 313 KAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGD 191 +AY+R +++T + + +A+LL+EKE + ++ + D Sbjct: 659 RAYERATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 699
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 52.0 bits (123), Expect = 8e-07 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 6/101 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSF------PQREDGFEMNKPYSNQTASIIDTEVREWVA 314 +V+++ V +GFS K+G ++ P K YS TA I+D EVRE V Sbjct: 598 QVSRVARQMVERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDYSMATADIVDKEVRELVD 657 Query: 313 KAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGD 191 KAY+R ++ + + +A+LL+EKE + ++ + D Sbjct: 658 KAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSLFID 698
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 51.6 bits (122), Expect = 1e-06 Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 6/115 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSF-PQREDGF-----EMNKPYSNQTASIIDTEVREWVA 314 K TK+ + V +G S K+G + + + D F YS++ A ID EVR+ + Sbjct: 504 KATKIARSMVTEFGMSSKLGAVRYGSEHGDPFLGRTMGTQADYSHEVARDIDDEVRKLIE 563 Query: 313 KAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLF 149 A+ ++LTE ++ + +A LLEKE LH+ +L + K LT +D F Sbjct: 564 AAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEGIFASVE-KRPRLTMFDDF 617
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 50.1 bits (118), Expect = 3e-06 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 4/135 (2%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQRED---GFEMNKPYSNQTASIIDTEVREWVAKAYKR 299 T + A V G SD +G + D G + N S TA +ID EV+ + + Y+ Sbjct: 500 TNIARAMVTKAGLSDLIGPIFHGSSGDDMYGRQPNNETSEATAELIDAEVKRIITQGYEF 559 Query: 298 TVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQG-FQDEEG 122 D+LT+ +Q+ +A L+E E L + +L R + E + + ++ Sbjct: 560 AKDILTKHIDQLHTLANALIEYETLSGQQIKNLLSGRALDSEEENKFPFNDSSTIKIDKE 619 Query: 121 KTAEPTKDTEVPDDD 77 K+ E TK T+ ++ Sbjct: 620 KSPEKTKTTKAKKEN 634
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 49.3 bits (116), Expect = 5e-06 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 6/87 (6%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSF------PQREDGFEMNKPYSNQTASIIDTEVREWVA 314 +V+++ V GFS K+G ++ P K YS TA ++D+EVRE V Sbjct: 576 QVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDSEVRELVE 635 Query: 313 KAYKRTVDLLTEKKEQVALIAELLLEK 233 KAY+R ++T + + +A+LL+EK Sbjct: 636 KAYERAKQIITTHIDILHKLAQLLIEK 662
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 49.3 bits (116), Expect = 5e-06 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 7/101 (6%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQRED----GFEMNKP---YSNQTASIIDTEVREWV 317 + T + V YG S +G L++ + + G M P S+ TA ID EV+E V Sbjct: 518 RATDLAEQMVTTYGMSKVLGPLAYDKGQQNNFLGQGMGNPRRMVSDDTAKEIDLEVKEIV 577 Query: 316 AKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 194 + + + + +L ++ + IAE +LEKEV+ ++L +LG Sbjct: 578 EQGHNQALAILEHNRDLLEAIAEKILEKEVIEGEELHHLLG 618
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 47.4 bits (111), Expect = 2e-05 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 3/103 (2%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQRED---GFEMNKPYSNQTASIIDTEVREWVAKAYKR 299 T + A V G SD +G + D G + + S TA +ID EV+ + + Y+ Sbjct: 500 TNIARAMVTKAGLSDLIGPIFHGSNSDDMYGRQSSNEISEATAELIDAEVKRIITQGYEF 559 Query: 298 TVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAE 170 D+LT+ +Q+ +A L+E E L + +L R + E Sbjct: 560 AKDILTKHIDQLHTLANALIEYETLSGQQIKNLLSGRALDSEE 602
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 47.4 bits (111), Expect = 2e-05 Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 8/125 (6%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEMNKPY---SNQTASIIDTEVREWVAKAY 305 + T+M A V YG S+K+G + + P S QTA ID EVR + +A Sbjct: 528 QATQMARAMVTEYGMSEKLGPVQYEGNHAMLGAQSPQKSISEQTAYEIDEEVRSLLNEAR 587 Query: 304 KRTVDLLTEKKEQVALIAELLLEKEVLHQDDL-----TRVLGDRPFKAAELTNYDLFKQG 140 + +++ +E LIAE LL+ E L + T + + + + +YD K Sbjct: 588 NKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGKMPEAVEEESHALSYDEVKSK 647 Query: 139 FQDEE 125 DE+ Sbjct: 648 MNDEK 652
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 47.4 bits (111), Expect = 2e-05 Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 8/125 (6%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEMNKPY---SNQTASIIDTEVREWVAKAY 305 + T+M A V YG S+K+G + + P S QTA ID EVR + +A Sbjct: 528 QATQMARAMVTEYGMSEKLGPVQYEGNHAMLGAQSPQKSISEQTAYEIDEEVRSLLNEAR 587 Query: 304 KRTVDLLTEKKEQVALIAELLLEKEVLHQDDL-----TRVLGDRPFKAAELTNYDLFKQG 140 + +++ +E LIAE LL+ E L + T + + + + +YD K Sbjct: 588 NKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGKMPEAVEEESHALSYDEVKSK 647 Query: 139 FQDEE 125 DE+ Sbjct: 648 MNDEK 652
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 46.6 bits (109), Expect = 3e-05 Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 7/137 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDG-------FEMNKPYSNQTASIIDTEVREWV 317 + T + V YG S+K+G + F G + + YS+ A ID EV+ + Sbjct: 507 RATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLGRDIQNEQNYSDAIAHEIDLEVQRII 566 Query: 316 AKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGF 137 + Y R +L E K+ + L+A+ LL+ E L + + ++ + N K+ Sbjct: 567 KECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLVHEGKLPDDHHLNAHPEKEKA 626 Query: 136 QDEEGKTAEPTKDTEVP 86 + + K +K E P Sbjct: 627 SESDVKVNINSKKEETP 643
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 46.2 bits (108), Expect = 4e-05 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 6/101 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFP-QREDGF-----EMNKPYSNQTASIIDTEVREWVA 314 +VT M V +G S+ +G LS Q D F + YS AS ID +VR + Sbjct: 515 QVTSMARQMVTRFGMSN-IGPLSLESQNSDPFLGRTMGSSSQYSEDIASRIDMQVRAIIQ 573 Query: 313 KAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGD 191 + TV ++ + + + + +LL+EKE + D+ +++GD Sbjct: 574 HCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIVGD 614
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 45.1 bits (105), Expect = 1e-04 Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 4/146 (2%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEMNKPYSNQTASIIDTEVREWVAKAYKRT 296 K T + V +GFS K+G P +D + T +ID EV + + + R Sbjct: 506 KATILAQNMVKRFGFSSKIGPRVIPDTQD-----EQLGEATRDLIDKEVDQLLNDSLTRV 560 Query: 295 VDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGD--RPFKAAELTNYD--LFKQGFQDE 128 LL+ + +Q L+AE LL E L +D++ VL +P K +T+ L Q Sbjct: 561 RTLLSSQSKQHKLLAEALLHFETLTKDEVLAVLAGKMKPPKTQSVTSKSTTLLPQ----- 615 Query: 127 EGKTAEPTKDTEVPDDDGSAVLPNVV 50 P+ TE+P S ++ +VV Sbjct: 616 ----LGPSTSTEIPRMIVSLIIVHVV 637
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 43.9 bits (102), Expect = 2e-04 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 6/112 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQRED------GFEMNKPYSNQTASIIDTEVREWVA 314 +VT M V +G S K+G LS + G YS++ A+ ID +VRE V+ Sbjct: 515 QVTSMARQMVTRFGMS-KIGPLSLESQGSDPFLGRGMGGGSEYSDEVATNIDKQVREIVS 573 Query: 313 KAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNY 158 + YK ++ + + + + +LL+EKE + ++ ++ + + A NY Sbjct: 574 ECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEFRHIV--KEYTAIPEKNY 623
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 42.4 bits (98), Expect = 6e-04 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 6/100 (6%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQREDGFEMN------KPYSNQTASIIDTEVREWVAKA 308 T + V +GFS+K+G L + + E + K S++TA IID EV+ + + Sbjct: 497 TNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERN 556 Query: 307 YKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDR 188 Y R LLT+ + + + + L++ E + + ++ R Sbjct: 557 YNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMARR 596
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 42.4 bits (98), Expect = 6e-04 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 6/100 (6%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQREDGFEMN------KPYSNQTASIIDTEVREWVAKA 308 T + V +GFS+K+G L + + E + K S++TA IID EV+ + + Sbjct: 497 TNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERN 556 Query: 307 YKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDR 188 Y R LLT+ + + + + L++ E + + ++ R Sbjct: 557 YNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMARR 596
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 42.4 bits (98), Expect = 6e-04 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 6/100 (6%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQREDGFEMN------KPYSNQTASIIDTEVREWVAKA 308 T + V +GFS+K+G L + + E + K S++TA IID EV+ + + Sbjct: 497 TNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERN 556 Query: 307 YKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDR 188 Y R LLT+ + + + + L++ E + + ++ R Sbjct: 557 YNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMARR 596
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 42.0 bits (97), Expect = 8e-04 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEMN-KPYSNQTASIIDTEVREWVAKAYKR 299 K T + A V G S K+G + + + N K YS QTA ID E+ + + YK+ Sbjct: 575 KATNIARAMVTQLGMS-KLGQVQYVPSQGTLPSNVKLYSEQTAKDIDNEINFIIEEQYKK 633 Query: 298 TVDLLTEKKEQVALIAELLLEKEVLHQDDL 209 ++ ++++ L+ E LL E + + D+ Sbjct: 634 AKTIIKSNRKELELLVEALLIAETILKSDI 663
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 41.6 bits (96), Expect = 0.001 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 6/100 (6%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQREDGFEMN------KPYSNQTASIIDTEVREWVAKA 308 T + V +GFS+K+G L + + E + K S++TA IID EV+ + + Sbjct: 497 TNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERN 556 Query: 307 YKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDR 188 Y R +LT+ + + + + L++ E + + ++ R Sbjct: 557 YNRARQILTDNMDILHAMKDALMKYETIDAPQIDDLMARR 596
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 41.6 bits (96), Expect = 0.001 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 6/100 (6%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQREDGFEMN------KPYSNQTASIIDTEVREWVAKA 308 T + V +GFS+K+G L + + E + K S++TA IID EV+ + + Sbjct: 497 TNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERN 556 Query: 307 YKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDR 188 Y R +LT+ + + + + L++ E + + ++ R Sbjct: 557 YNRARQILTDNMDILHAMKDALMKYETIDAPQIDDLMARR 596
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 41.6 bits (96), Expect = 0.001 Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 7/100 (7%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDG-------FEMNKPYSNQTASIIDTEVREWV 317 +VT + V +G S+ +G L+ G Y+ A ID EVR+ + Sbjct: 528 QVTNLARQMVTRFGMSN-IGPLALEDESTGQVFLGGNMASGSEYAENIADRIDDEVRKII 586 Query: 316 AKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL 197 Y++ ++++ + + + LI E LL+KE + D+ +L Sbjct: 587 TYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFRELL 626
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 41.6 bits (96), Expect = 0.001 Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 6/111 (5%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQREDGFEM------NKPYSNQTASIIDTEVREWVAKA 308 T + V +GFS K+G L + + E + +K S++TA IID EV+ V K Sbjct: 497 TNLARNMVTQWGFSKKLGPLLYSEEEGEIFLGRTVTKSKHMSDETARIIDEEVKLLVEKN 556 Query: 307 YKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYD 155 Y R +L E + + + + L++ E ++ + ++ + +++ + D Sbjct: 557 YNRAKKILEENLDILHAMKDALIKYETINSRQIDDLMKRKSIQSSNICTDD 607
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 40.8 bits (94), Expect = 0.002 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 1/129 (0%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSF-PQREDGFEMNKPYSNQTASIIDTEVREWVAKAYKR 299 K T + A V G S K+G + + P + K +S QTA ID E+ + + YK+ Sbjct: 572 KATNIARAMVTQLGMS-KLGQVQYVPSQGTVPPGTKLFSEQTAKDIDFEINAIIEEQYKK 630 Query: 298 TVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGK 119 ++ ++++ L+ E LL E + + D+ + + E+ +Q Q E K Sbjct: 631 ARTIIKTNRKELELLVEALLIAETILKSDID-YIHEHTKLPPEILAQKQEQQAKQKAEAK 689 Query: 118 TAEPTKDTE 92 A+ K TE Sbjct: 690 EAKLNKKTE 698
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 40.4 bits (93), Expect = 0.002 Identities = 20/100 (20%), Positives = 51/100 (51%), Gaps = 5/100 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQRED-----GFEMNKPYSNQTASIIDTEVREWVAK 311 + T + V+ YG S GL+ ++ + G+ ++ +S +TA +D ++ + + Sbjct: 514 RATDIIKGMVSYYGMSSVSGLMVLEKQRNAFLGGGYGSSREFSEKTAEEMDLFIKNLLEE 573 Query: 310 AYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGD 191 YK L++ +E + ++ + L +KEV+ + + ++ + Sbjct: 574 RYKHVKQTLSDYREAIEIMVKELFDKEVITGERVREIISE 613
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 40.4 bits (93), Expect = 0.002 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%) Frame = -1 Query: 454 AQVAVYGFSDKVGLLSFPQREDGFEMNKPYSNQTASIIDTEVREWVAKAYKRTVDLLTEK 275 A V YG SD VG ++ + + +SN+ I D EV E + + +R LLT+K Sbjct: 628 AMVTQYGMSDDVGPVNLSENWES------WSNKIRDIADNEVIELLKDSEERARRLLTKK 681 Query: 274 KEQVALIAELLLEKEVLHQDDLTRVL-GDRPFKAAELTN 161 ++ +A+ L+E E L ++ +V G++ K TN Sbjct: 682 NVELHRLAQGLIEYETLDAHEIEQVCKGEKLDKLKTSTN 720
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 39.7 bits (91), Expect = 0.004 Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 5/100 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQRED-----GFEMNKPYSNQTASIIDTEVREWVAK 311 + T + V+ YG SD GL+ ++ + GF + +S + A +D+ ++ + + Sbjct: 520 RATDIIKGMVSYYGMSDVSGLMVLEKQRNSFLGGGFGSGREFSEKMAEEMDSFIKNLLEE 579 Query: 310 AYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGD 191 Y L++ K+ + ++ L EKEV+ + + ++ + Sbjct: 580 RYVHVKQTLSDYKDAIEVMVNELFEKEVITGERVREIISE 619
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 38.9 bits (89), Expect = 0.007 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQREDGFEMN------KPYSNQTASIIDTEVREWVAKA 308 T + V +GFSDK+G L + + E + K S++TA IID EV+ + Sbjct: 497 TNLARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDEEVKLLIEVN 556 Query: 307 YKRTVDLLTEKKEQVALIAELLLEKEV---LHQDDL 209 Y R +L E + + + + L++ E L DDL Sbjct: 557 YNRARKILNENLDILHAMKDALIKYETIDSLQIDDL 592
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 38.9 bits (89), Expect = 0.007 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 9/98 (9%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQREDGFEMN------KPYSNQTASIIDTEVREWVAKA 308 T + V +GFS+K+G L + + E + K S++TA IID EV+ + Sbjct: 497 TSLAKNMVTQWGFSEKLGPLLYAEEEGEIFLGRSVAKAKHMSDETARIIDEEVKLLIEIN 556 Query: 307 YKRTVDLLTEKKEQVALIAELLLEKEVLHQ---DDLTR 203 Y R ++L E + + + E L++ E + DDL + Sbjct: 557 YSRARNILNENIDILHAMKEALIKYETIDAFQIDDLMK 594
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 37.0 bits (84), Expect = 0.026 Identities = 24/91 (26%), Positives = 45/91 (49%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQREDGFEMNKPYSNQTASIIDTEVREWVAKAYKRTVD 290 TK+ V +G S+K+G++++ S +T S I+ E+R + ++Y+R Sbjct: 624 TKIAKRMVTKFGMSEKLGVMTYSD-------TGKLSPETQSAIEQEIRILLRESYERAKH 676 Query: 289 LLTEKKEQVALIAELLLEKEVLHQDDLTRVL 197 +L ++ +AE LL E L ++ VL Sbjct: 677 ILKTHAKEHKNLAEALLTYETLDAKEIQIVL 707
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 37.0 bits (84), Expect = 0.026 Identities = 24/91 (26%), Positives = 45/91 (49%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQREDGFEMNKPYSNQTASIIDTEVREWVAKAYKRTVD 290 TK+ V +G S+K+G++++ S +T S I+ E+R + ++Y+R Sbjct: 624 TKIAKRMVTKFGMSEKLGVMTYSD-------TGKLSPETQSAIEQEIRILLRESYERAKH 676 Query: 289 LLTEKKEQVALIAELLLEKEVLHQDDLTRVL 197 +L ++ +AE LL E L ++ VL Sbjct: 677 ILKTHAKEHKNLAEALLTYETLDAKEIQIVL 707
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 36.2 bits (82), Expect = 0.044 Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 5/82 (6%) Frame = -3 Query: 320 GCQGLQKNS*PVNGEEGTSSSYRGV--AAREGGPPPGRSDQGIRRPPLQGSRA---NKL* 156 G +G + PV+ G S R AAR+ GP PG G +PPL RA N+ Sbjct: 229 GGRGRARTPGPVHSAAGGPGSRRRSPGAARDPGPEPGEERGGGGKPPLGSPRATDGNR-- 286 Query: 155 PLQAGVPGRRGQDRRAHQGHRG 90 AGVP R G+ G RG Sbjct: 287 DPGAGVPARPGRRMGGSSGGRG 308
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 36.2 bits (82), Expect = 0.044 Identities = 24/91 (26%), Positives = 44/91 (48%) Frame = -1 Query: 469 TKMTYAQVAVYGFSDKVGLLSFPQREDGFEMNKPYSNQTASIIDTEVREWVAKAYKRTVD 290 TK+ V +G S+K+G++++ S +T S I+ E+R + +Y+R Sbjct: 682 TKIAKRMVTKFGMSEKLGVMTYSD-------TGKLSPETQSAIEQEIRILLRDSYERAKH 734 Query: 289 LLTEKKEQVALIAELLLEKEVLHQDDLTRVL 197 +L ++ +AE LL E L ++ VL Sbjct: 735 ILKTHAKEHKNLAEALLTYETLDAKEIQIVL 765
>ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3.6.1.-)| (ATP-dependent helicase XNP) (X-linked nuclear protein) (dXNP) (d-xnp) Length = 1311 Score = 33.5 bits (75), Expect = 0.29 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -2 Query: 153 SSSRGSRTKRARPQSPPRTPRCLMTMDRLCSP 58 SS R SR +R +SPPR RC++ + R+ P Sbjct: 224 SSERSSRASSSRAESPPRPKRCVVRLKRVSLP 255
>DPO3A_MYCTU (P63977) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1184 Score = 33.5 bits (75), Expect = 0.29 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = -1 Query: 229 VLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVPDDD 77 ++H D + VLG + KA L +DLF G D+ TA+P +VPDD+ Sbjct: 926 LVHSDAVDSVLGTK--KAEALGQFDLF--GSNDDGTGTADPVFTIKVPDDE 972
>DPO3A_MYCBO (P63978) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1184 Score = 33.5 bits (75), Expect = 0.29 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = -1 Query: 229 VLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVPDDD 77 ++H D + VLG + KA L +DLF G D+ TA+P +VPDD+ Sbjct: 926 LVHSDAVDSVLGTK--KAEALGQFDLF--GSNDDGTGTADPVFTIKVPDDE 972
>YQFW_BACSU (P54480) Putative nucleotidase yqfW (EC 3.1.3.-)| Length = 193 Score = 32.3 bits (72), Expect = 0.64 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 9/103 (8%) Frame = -1 Query: 367 YSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELL---------LEKEVLHQD 215 + NQ +II E +A+ K+++DLL E+ + + + A +++ +H D Sbjct: 54 WMNQNEAIIYKEAL--LAQHAKQSLDLLKEEHKLIYITARRTHLTDITYEWFDRQNIHYD 111 Query: 214 DLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVP 86 + V G +A + N DLF F+D G K+ +P Sbjct: 112 HIELVGGHHKVEAVKNHNIDLF---FEDHHGNAMMIAKEAGIP 151
>HCN1_HUMAN (O60741) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (Brain cyclic nucleotide gated channel 1) (BCNG-1) Length = 890 Score = 32.0 bits (71), Expect = 0.83 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 189 APSRQPS*QTMTS-SSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHS 13 AP P T+ S SS + T R R QSPP ++ L SP+ S + P+ L Sbjct: 637 APINYPQMTTLNSTSSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSP 696 Query: 12 CTW 4 C++ Sbjct: 697 CSY 699
>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor| Length = 674 Score = 31.2 bits (69), Expect = 1.4 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = -3 Query: 287 VNGEEGTSSSYRGVAAREG--GPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQ 120 + G++G RG A G GPP + +GI +P G P Q G+PG +GQ Sbjct: 233 LKGDQGVPGE-RGAAGPSGPQGPPGEQGPEGIGKPGAPGI------PGQPGIPGMKGQ 283
>COCA1_RAT (P70560) Collagen alpha-1(XII) chain (Fragment)| Length = 317 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = -3 Query: 251 GVAAREGGPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQDRRAHQGHRG 90 G A G P PG + RP +QG P + G+PG +G+ QG RG Sbjct: 150 GAAGARGEPGPGGAPGFPGRPGVQGP------PGERGLPGEKGERGIGSQGPRG 197
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 30.8 bits (68), Expect = 1.9 Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 5/94 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEMNKPYSNQT-----ASIIDTEVREWVAK 311 + TK+ V +G S +G + + + + + + YS T A ID E+R+ ++ Sbjct: 555 RATKIARKMVTEWGMS-ALGPIKYEEDTENPFLGRDYSKGTFGSKMAHEIDLEIRKIISA 613 Query: 310 AYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDL 209 + + + + + E + LI + LLE E + +++ Sbjct: 614 SEEIAIKAIEQNLELLELIKDSLLENETIVAEEI 647
>ZN436_PONPY (Q5R5Y7) Zinc finger protein 436| Length = 470 Score = 30.8 bits (68), Expect = 1.9 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Frame = -1 Query: 403 PQREDGFEMNKPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLE--KE 230 P+ E+GFE Q D EWV+ ++ DLL K+ + + K Sbjct: 90 PESEEGFESGDRSERQWG---DLTAEEWVSYPLQQVTDLLVHKEVHTGIRYHICSHCGKA 146 Query: 229 VLHQDDLTR----VLGDRPFKAAE 170 DL R GDRP+K E Sbjct: 147 FSQISDLNRHQKTHTGDRPYKCYE 170
>SETB1_HUMAN (Q15047) Histone-lysine N-methyltransferase, H3 lysine-9 specific 4| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 4) (H3-K9-HMTase 4) (SET domain bifurcated 1) (ERG-associated protein with SET domain) (ESET) Length = 1291 Score = 30.8 bits (68), Expect = 1.9 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 6/92 (6%) Frame = -1 Query: 334 EVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKE--VLHQDDLTRVLGDRPFKAAELTN 161 E+R ++ + ++ +D + ++K+Q+A + +++KE V H D L L Sbjct: 39 ELRHFIDEELEK-MDCVQQRKKQLAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVK 97 Query: 160 YDLFKQGFQ----DEEGKTAEPTKDTEVPDDD 77 K G Q E +++ PT+ E+PD+D Sbjct: 98 DFYSKLGLQYRDSSSEDESSRPTEIIEIPDED 129
>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3| homolog (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) Length = 4903 Score = 30.8 bits (68), Expect = 1.9 Identities = 20/73 (27%), Positives = 38/73 (52%) Frame = -1 Query: 427 DKVGLLSFPQREDGFEMNKPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAE 248 D VGL++ ++ +MN +N+ A +DTE E ++K + E + +V E Sbjct: 595 DTVGLITSESSDN--KMNPDLANEIAHEVDTEKTEMLSKGRHVCEEDQNEDRMEVTENIE 652 Query: 247 LLLEKEVLHQDDL 209 +L + ++ Q+DL Sbjct: 653 VLPHQTIVPQEDL 665
>ASIP_CANFA (Q5UK76) Agouti signaling protein precursor (ASP) (Agouti switch| protein) Length = 131 Score = 30.8 bits (68), Expect = 1.9 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -2 Query: 183 SRQPS*QTMTSSSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSC 46 SR+ + + +S + S ARP+ PP TP C+ T + SP +C Sbjct: 62 SRKEAEKKRSSKKKASMKNVARPRPPPPTP-CVATRNSCKSPAPAC 106
>SECA_ARATH (Q9SYI0) Preprotein translocase secA subunit, chloroplast precursor| Length = 1021 Score = 30.4 bits (67), Expect = 2.4 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 7/108 (6%) Frame = -1 Query: 418 GLLS--FPQREDGFEMNKPYSNQTASI--IDTEVREWVAKAYKRTVDLLTEKKEQVALIA 251 GLLS F ++G + Y++ AS+ ++TE+ + D L ++ ++ + Sbjct: 76 GLLSGIFKGSDNGESTRQQYASIVASVNRLETEISALSDSELRERTDALKQRAQKGESMD 135 Query: 250 ELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFK---QGFQDEEGKT 116 LL E + ++ RVLG RPF + L K + EGKT Sbjct: 136 SLLPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKT 183
>MRE11_ARATH (Q9XGM2) Double-strand break repair protein MRE11| Length = 720 Score = 30.4 bits (67), Expect = 2.4 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = -1 Query: 262 ALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVPD 83 AL+AE L+ E+L +DL L + K +L Y + Q+ GK A+ + + + Sbjct: 428 ALVAESNLKMEILPVNDLDVALHNFVNKDDKLAFYSCVQYNLQETRGKLAKDSDAKKFEE 487 Query: 82 DD 77 DD Sbjct: 488 DD 489
>HCN1_RABIT (Q9MZS1) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (rbHCN1) Length = 822 Score = 30.4 bits (67), Expect = 2.4 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = -2 Query: 189 APSRQPS*QTMTS-SSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHS 13 AP P + S SS + T R R QSPP ++ L SP+ S + P+ L Sbjct: 573 APISYPQMTALNSTSSTATPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSP 632 Query: 12 CTW 4 C++ Sbjct: 633 CSY 635
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 30.4 bits (67), Expect = 2.4 Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 6/102 (5%) Frame = -1 Query: 475 KVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEMNKPY------SNQTASIIDTEVREWVA 314 +VT M V +G S KVG + + + S + + +D EVR + Sbjct: 513 QVTFMARQMVTKFGMS-KVGPICLENSSSEVFIGRDLMGRHELSEEMVAKVDLEVRSILK 571 Query: 313 KAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDR 188 Y + +L++ ++ + + L+EKE + + R++ +R Sbjct: 572 DCYIQARTILSQNRKLIDRVVNELVEKETIEAKEFMRIVEER 613
>SETB1_MOUSE (O88974) Histone-lysine N-methyltransferase, H3 lysine-9 specific 4| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 4) (H3-K9-HMTase 4) (SET domain bifurcated 1) (ERG-associated protein with SET domain) (ESET) Length = 1307 Score = 30.0 bits (66), Expect = 3.2 Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 12/98 (12%) Frame = -1 Query: 334 EVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAA--ELTN 161 E+R+++ + ++ +D + ++K+Q+A + +L+KE ++ V DR F A E+TN Sbjct: 39 ELRQYIDEELEK-MDCIQQRKKQLAELETWVLQKE----SEVAYV--DRLFDDASREVTN 91 Query: 160 YDLFKQGFQDE----------EGKTAEPTKDTEVPDDD 77 + + F + E + + PT+ E+PD+D Sbjct: 92 CESLVKDFYSKLGLQYHDSSSEDEASRPTEIIEIPDED 129
>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor| Length = 1775 Score = 30.0 bits (66), Expect = 3.2 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%) Frame = -3 Query: 329 EGMGCQGLQKNS*PVN--GEEGTS--SSYRGVAAREGGP-PPG----RSDQGIRRPPLQG 177 +G G G N P GE+GT+ + +G G P PPG + D G+ +QG Sbjct: 437 DGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLPGYGIQG 496 Query: 176 SRANKL*PLQAGVPGRRGQDRRAHQGHRGA 87 S+ + P G+ G +G+ R +G+ GA Sbjct: 497 SKGDAGIPGYPGLKGSKGE--RGFKGNAGA 524
>VGLE_PRVRI (P08354) Glycoprotein GI precursor| Length = 577 Score = 30.0 bits (66), Expect = 3.2 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -2 Query: 105 PRTPRCLMTMDRLCSPTSSCRRRNPARRLH-SCT 7 PR P CL +D CS TS R ARR + SC+ Sbjct: 287 PRAPECLRPVDPACSFTSPARAALVARRAYASCS 320
>RBP1_RAT (Q62796) RalA-binding protein 1 (RalBP1) (Ral-interacting protein| 1) (Cytocentrin) (Dinitrophenyl S-glutathione ATPase) (DNP-SG ATPase) Length = 646 Score = 30.0 bits (66), Expect = 3.2 Identities = 22/75 (29%), Positives = 38/75 (50%) Frame = -1 Query: 283 TEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPT 104 ++KKE+ I E KE H+++ + + K + T D+ KQ E+ K +PT Sbjct: 117 SKKKEKDFKIKEK--PKEEKHKEEKHKEEKHKEKKCKDFTAADVVKQW--KEKKKKKKPT 172 Query: 103 KDTEVPDDDGSAVLP 59 ++ EVP D ++ P Sbjct: 173 QEPEVPQTDAPSLRP 187
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 29.6 bits (65), Expect = 4.1 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -1 Query: 424 KVGLLSFPQREDGFEMNKPYSNQTASIIDTEVR 326 K+ + FPQR DG ++N Y+N+ D +R Sbjct: 527 KLCYVQFPQRFDGIDLNDRYANRNIVFFDINMR 559
>DPOLN_HUMAN (Q7Z5Q5) DNA polymerase nu (EC 2.7.7.7)| Length = 900 Score = 29.6 bits (65), Expect = 4.1 Identities = 12/38 (31%), Positives = 24/38 (63%) Frame = -1 Query: 382 EMNKPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKE 269 ++N Y N + +I++ VRE + Y+ T+DL ++ K+ Sbjct: 380 KVNSTYGNSSRNIVNQNVRENLKTLYRLTMDLCSKLKD 417
>RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase| Length = 882 Score = 29.3 bits (64), Expect = 5.4 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Frame = -1 Query: 343 IDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQ--DDLTRVLGDRPFKAAE 170 +D+++RE + + YKR + LL KKE E+ KE L ++L V D + Sbjct: 593 LDSKLRE-LEEIYKRYLTLLNSKKELEITQREIAKAKETLEMSFEELAEVEADIERIEKK 651 Query: 169 LTNYDLFKQGFQDEEGKTAEPTKD 98 L+ KQ + +EE K K+ Sbjct: 652 LSQ---LKQKYNEEEYKKKREEKE 672
>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2| Length = 954 Score = 29.3 bits (64), Expect = 5.4 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -3 Query: 242 AREGGPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQDRRAHQG 99 AR G P PGR Q R + +R + Q+ RR DRR +QG Sbjct: 113 ARPGMPTPGRHGQNDNRENGRDNREGRENGRQSRPNDRRNNDRRNNQG 160
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 29.3 bits (64), Expect = 5.4 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -3 Query: 287 VNGEEGTSSSYRGVAAREGGPPPGR--SDQGIRRPPLQGSRANKL*PLQAGVPGRR 126 + G E RGV + GPPP R S R P GS + P + G P RR Sbjct: 896 LTGPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRR 951
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 29.3 bits (64), Expect = 5.4 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -3 Query: 287 VNGEEGTSSSYRGVAAREGGPPPGRSDQ--GIRRPPLQGSRANKL*PLQAGVPGRR 126 ++G E RGV GPPP R + R P GS + P GVP RR Sbjct: 897 LSGPEAGRKPARGVGGGGQGPPPPRRENRTETRWGPRPGSCRRGIPPEDPGVPPRR 952
>TGM1_RAT (P23606) Protein-glutamine gamma-glutamyltransferase K (EC| 2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K)) (Transglutaminase-1) (Epidermal TGase) Length = 824 Score = 29.3 bits (64), Expect = 5.4 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = -3 Query: 281 GEEGTSSSYRGVAAR----EGGPPPGRSDQGIRRPPLQGSRAN 165 G E + S RG ++R GG GR +G RRP +GS N Sbjct: 64 GPEPSGSRSRGTSSRGGGSRGGDSRGRDSRGGRRPESRGSGVN 106
>GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)| Length = 815 Score = 29.3 bits (64), Expect = 5.4 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -2 Query: 135 RTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRN 34 RT P+S TP + R CS T SCRRR+ Sbjct: 664 RTPSTTPRSWCSTPTRMEPCGRRCSTTPSCRRRS 697
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 29.3 bits (64), Expect = 5.4 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -3 Query: 287 VNGEEGTSSSYRGVAAREGGPPPGR--SDQGIRRPPLQGSRANKL*PLQAGVPGRR 126 + G E RGV + GPPP R S R P GS + P + G P RR Sbjct: 893 LTGPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRR 948
>TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 751 Score = 28.9 bits (63), Expect = 7.1 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = -3 Query: 281 GEEGTSSSYRGVAAREGGP--PPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQ 120 G++GTS++ R A P PPG + PP G R+ P G PG R + Sbjct: 471 GQKGTSNATRIPAKTTPSPKTPPGSGE-----PPKSGERSGYSSPGSPGTPGSRSR 521
>RBP2_MOUSE (Q9ERU9) Ran-binding protein 2 (RanBP2)| Length = 3053 Score = 28.9 bits (63), Expect = 7.1 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%) Frame = -1 Query: 334 EVREWVAKA---YKRTVDLLTEKKEQVALIAELLLEKEV 227 EV E + KA YKR+V+L +K+ V IAELL + +V Sbjct: 71 EVEENIDKAVECYKRSVELNPTQKDLVLKIAELLCKNDV 109
>PGFRA_RAT (P20786) Alpha platelet-derived growth factor receptor precursor| (EC 2.7.10.1) (PDGF-R-alpha) Length = 1088 Score = 28.9 bits (63), Expect = 7.1 Identities = 22/83 (26%), Positives = 33/83 (39%) Frame = -1 Query: 340 DTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTN 161 D R +V +++ D + K+ +L KEV D+ R L DRP + Sbjct: 713 DESTRSYVILSFENNGDYVDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRP------AS 766 Query: 160 YDLFKQGFQDEEGKTAEPTKDTE 92 Y K+ D E K D+E Sbjct: 767 YK--KKSMLDSEAKNLLSDDDSE 787
>HCN1_RAT (Q9JKB0) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 Length = 910 Score = 28.9 bits (63), Expect = 7.1 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -2 Query: 153 SSSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHSCTW 4 +SS + T R R QSPP ++ L SP+ S + P+ L C++ Sbjct: 639 TSSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSPCSY 688
>HCN1_MOUSE (O88704) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (Brain cyclic nucleotide gated channel 1) (BCNG-1) (Hyperpolarization-activated cation channel 2) (HAC-2) Length = 910 Score = 28.9 bits (63), Expect = 7.1 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -2 Query: 153 SSSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHSCTW 4 +SS + T R R QSPP ++ L SP+ S + P+ L C++ Sbjct: 639 TSSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSPCSY 688
>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor| Length = 1707 Score = 28.9 bits (63), Expect = 7.1 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 8/63 (12%) Frame = -3 Query: 284 NGEEGTSSSYRGVAAREGGPPPGRSDQGIRRPP--------LQGSRANKL*PLQAGVPGR 129 +GE G+ + Y G +G P P + G PP L+GS P +G PG Sbjct: 410 SGEPGSPARYLGPPGADGRPGP-QGVPGPAGPPGPDGFLFGLKGSEGRVGYPGPSGFPGT 468 Query: 128 RGQ 120 RGQ Sbjct: 469 RGQ 471
>ASIP_VULVU (P79407) Agouti signaling protein precursor (ASP) (Agouti switch| protein) Length = 131 Score = 28.9 bits (63), Expect = 7.1 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = -2 Query: 183 SRQPS*QTMTSSSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSC 46 SR+ + + +S + S ARP+ PP P C+ T + SP +C Sbjct: 62 SRKEAEKKRSSKKKASMKNVARPRPPPPNP-CVATRNSCKSPAPAC 106
>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 Length = 819 Score = 28.9 bits (63), Expect = 7.1 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = -3 Query: 251 GVAAREGGPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQDRRAHQGHRG 90 G+ + GPPP PP +R + G PG RG+ R +GH G Sbjct: 710 GMRGGDRGPPP---------PPFHRNRGGR-----GGEPGYRGRGRGGERGHPG 749
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 28.9 bits (63), Expect = 7.1 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -1 Query: 424 KVGLLSFPQREDGFEMNKPYSNQTASIIDTEVR 326 KV + FPQR DG + N Y+N+ D ++ Sbjct: 550 KVCYVQFPQRFDGIDTNDRYANRNTVFFDINMK 582
>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)| Length = 1426 Score = 28.9 bits (63), Expect = 7.1 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -2 Query: 192 TAPSRQPS*QTMTSSSRGSRTKRARPQSPPRTP 94 T P+ P+ + +T S+GS + A P++PP P Sbjct: 303 TGPNSTPNNRAVTPVSQGSNSSSADPKAPPPPP 335
>FBRL_GIALA (Q24957) Fibrillarin| Length = 327 Score = 28.9 bits (63), Expect = 7.1 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -3 Query: 254 RGVAAREGGPPPGRSDQGIRRPPLQG 177 RG R G PPG D+G RR P G Sbjct: 49 RGFGDRRGSGPPGGPDRGDRRGPRDG 74
>COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor| Length = 3119 Score = 28.9 bits (63), Expect = 7.1 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -3 Query: 251 GVAAREGGPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQDRRAHQGHRG 90 G A G P PG RP G+ + P + G+PG +G+ QG RG Sbjct: 2952 GSAGARGEPGPG------GRPGFPGTPGMQGPPGERGLPGEKGERGTGSQGPRG 2999
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 28.9 bits (63), Expect = 7.1 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -2 Query: 192 TAPSRQPS*QTMTSSSRGSRTKRARPQSPPRTP 94 T P+ P+ + +T S+GS + A P++PP P Sbjct: 303 TGPNSTPNNRAVTPVSQGSNSSSADPKAPPPPP 335
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 28.5 bits (62), Expect = 9.2 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -1 Query: 424 KVGLLSFPQREDGFEMNKPYSNQTASIIDTEVR 326 +V + FPQR DG + N Y+N+ D +R Sbjct: 571 QVCYVQFPQRFDGIDKNDRYANRNTVFFDINLR 603
>SART2_MOUSE (Q8BLI4) Squamous cell carcinoma antigen recognized by T-cells 2| precursor (SART-2) Length = 958 Score = 28.5 bits (62), Expect = 9.2 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +1 Query: 40 TSARRRWGAQPIHRHQAPRC 99 TS RR WG Q +H HQ C Sbjct: 191 TSYRRGWGFQYLHNHQPTNC 210
>SART2_HUMAN (Q9UL01) Squamous cell carcinoma antigen recognized by T-cells 2| precursor (SART-2) Length = 958 Score = 28.5 bits (62), Expect = 9.2 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +1 Query: 40 TSARRRWGAQPIHRHQAPRC 99 TS RR WG Q +H HQ C Sbjct: 191 TSYRRGWGFQYLHNHQPTNC 210
>ZN436_MOUSE (Q8BPP0) Zinc finger protein 436 (Zinc finger protein 46)| Length = 452 Score = 28.5 bits (62), Expect = 9.2 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 6/81 (7%) Frame = -1 Query: 394 EDGFEMNKPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLE--KEVLH 221 E G + +P+ + TA EWV+ ++ DLL K+ + + + K Sbjct: 79 ESGDQAERPWGDLTAE-------EWVSYPLQQVTDLLVHKEAHAGIRYHICSQCGKAFSQ 131 Query: 220 QDDLTR----VLGDRPFKAAE 170 DL R GDRP+K E Sbjct: 132 ISDLNRHQKTHTGDRPYKCYE 152
>ZFP46_MOUSE (Q03309) Zinc finger protein 46 (Zfp-46) (Zinc finger protein| MLZ-4) Length = 393 Score = 28.5 bits (62), Expect = 9.2 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 6/81 (7%) Frame = -1 Query: 394 EDGFEMNKPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLE--KEVLH 221 E G + +P+ + TA EWV+ ++ DLL K+ + + + K Sbjct: 20 ESGDQAERPWGDLTAE-------EWVSYPLQQVTDLLVHKEAHAGIRYHICSQCGKAFSQ 72 Query: 220 QDDLTR----VLGDRPFKAAE 170 DL R GDRP+K E Sbjct: 73 ISDLNRHQKTHTGDRPYKCYE 93
>UL50_HCMVA (P16791) Protein UL50 (HFLF4 protein)| Length = 397 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = -2 Query: 162 TMTSSSRGSRTKRARPQSPPRTPRCLMTM 76 T T+ R SRT A P PPR P C TM Sbjct: 204 TRTAGKRSSRT--ASPPPPPRHPSCSPTM 230
>PGFRA_MOUSE (P26618) Alpha platelet-derived growth factor receptor precursor| (EC 2.7.10.1) (PDGF-R-alpha) Length = 1089 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = -1 Query: 340 DTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRP 185 D R +V +++ D + K+ +L KEV D+ R L DRP Sbjct: 714 DESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRP 765
>PGFRA_HUMAN (P16234) Alpha platelet-derived growth factor receptor precursor| (EC 2.7.10.1) (PDGF-R-alpha) (CD140a antigen) Length = 1089 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = -1 Query: 340 DTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRP 185 D R +V +++ D + K+ +L KEV D+ R L DRP Sbjct: 714 DESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRP 765
>STX8_HUMAN (Q9UNK0) Syntaxin-8| Length = 236 Score = 28.5 bits (62), Expect = 9.2 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%) Frame = -1 Query: 313 KAYKRTVD---LLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDR 188 KA K TV LL KE++AL+ +LLL HQ +T++ GDR Sbjct: 36 KAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQ--ITQLEGDR 78
>PEPF_BACSU (O31605) Oligoendopeptidase F homolog (EC 3.4.24.-)| Length = 609 Score = 28.5 bits (62), Expect = 9.2 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 5/116 (4%) Frame = -1 Query: 436 GFSDKVGLLSFPQREDGFEMNKPYSNQTASIIDTEVREWVA-----KAYKRTVDLLTEKK 272 G +DK G L + Q E P + SI + ++++++ K Y ++ +T+++ Sbjct: 98 GLNDKAGNL-YTQAESATAYLVP---EILSIEEDKLQQFILEKEELKLYSHAIEEITKER 153 Query: 271 EQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPT 104 V L EKE + + VLG + L N D+ +DE+G + T Sbjct: 154 PHV------LSEKEEALLAEASEVLGSSSNTFSVLNNADITFPSIKDEDGNEKQIT 203
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = -2 Query: 180 RQPS*QTMTSSSRGSRTKRARPQSPPRTPRCLMT--MDRLCSPTSSCRRRNPARRLHS 13 ++PS + S +R R SPP PR + + R SP+ RRR+P+ R +S Sbjct: 533 KEPSPRRRRRSPSPPPARRRRSPSPPPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYS 590
>ACM4_RAT (P08485) Muscarinic acetylcholine receptor M4| Length = 478 Score = 28.5 bits (62), Expect = 9.2 Identities = 17/55 (30%), Positives = 22/55 (40%) Frame = -2 Query: 186 PSRQPS*QTMTSSSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARR 22 P P T SS GS T+ + + P T L +PT R NPA + Sbjct: 283 PRPVPDKDTSNESSSGSATQNTKERPPTELSTAEATTPALPAPTLQPRTLNPASK 337 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,542,133 Number of Sequences: 219361 Number of extensions: 1487905 Number of successful extensions: 5020 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 4618 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4983 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
