ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18g24 |
|---|---|
| Clone Library Name | barley_pub |
>Y074_SYNY3 (Q55790) Hypothetical UPF0051 protein slr0074| Length = 480 Score = 199 bits (506), Expect = 6e-51 Identities = 101/149 (67%), Positives = 117/149 (78%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 ALT + QQADTGTKMIH GKN+RS IISKGISAG S N YRGLV+M A+ A N SQCD Sbjct: 332 ALTNNKQQADTGTKMIHIGKNTRSIIISKGISAGNSANSYRGLVKMGPKAQGARNYSQCD 391 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGF 315 S+LIGD+AAANT+P IQV + +VEHEASTSKIGEDQLFYF QRGI E AV+ ++ GF Sbjct: 392 SMLIGDRAAANTFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGF 451 Query: 314 CRAVFEHLPYEFAQEVDALMNLKLEGSVG 228 C+ V LP EFA E D L++LKLEG+VG Sbjct: 452 CKDVLNELPMEFAAEADKLLSLKLEGTVG 480
>YCF24_CYAPA (P48260) Hypothetical UPF0051 protein ycf24| Length = 486 Score = 199 bits (505), Expect = 8e-51 Identities = 100/149 (67%), Positives = 119/149 (79%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 ALT YQQADTGTKMIH GKN+RSRIISKGISAG S+N YRGLV++ A A N SQCD Sbjct: 338 ALTNRYQQADTGTKMIHIGKNTRSRIISKGISAGHSQNSYRGLVKIGPKAVGARNYSQCD 397 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGF 315 SLLIGD + ANT+P +Q+ + +VEHEASTSKIGE+Q+FYF QRGI+ E+A++ +I GF Sbjct: 398 SLLIGDNSQANTFPHLQIKNPTAKVEHEASTSKIGEEQIFYFLQRGINAEEAISLIISGF 457 Query: 314 CRAVFEHLPYEFAQEVDALMNLKLEGSVG 228 CR VF +LP EFA E D L+ LKLEGSVG Sbjct: 458 CREVFNNLPMEFALEADKLLGLKLEGSVG 486
>YCF24_ODOSI (P49530) Hypothetical UPF0051 protein ycf24 (ORF486)| Length = 486 Score = 193 bits (491), Expect = 3e-49 Identities = 98/149 (65%), Positives = 116/149 (77%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 ALT +YQQADTG+KMIH GKN+RSRI+SKGISAG S+N YRGLV +++ A A N SQCD Sbjct: 338 ALTNNYQQADTGSKMIHVGKNTRSRIVSKGISAGNSKNTYRGLVNISNKAIGARNYSQCD 397 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGF 315 SLLIG+ + ANT+P I V + ++EHEASTSKIGE+Q+FYF QRGI EK V MI GF Sbjct: 398 SLLIGNLSNANTFPFISVQNPTAKIEHEASTSKIGEEQIFYFLQRGIPIEKGVELMISGF 457 Query: 314 CRAVFEHLPYEFAQEVDALMNLKLEGSVG 228 C+ VF LP EFA E D L+ LKLEGSVG Sbjct: 458 CQEVFTELPLEFAAEADRLLTLKLEGSVG 486
>YCF24_PORPU (P51240) Hypothetical UPF0051 protein ycf24 (ORF487)| Length = 487 Score = 192 bits (489), Expect = 6e-49 Identities = 96/149 (64%), Positives = 119/149 (79%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 ALT +YQ+ADTGTKMIH G N++S+IISKGISAGKS+N YRGLV++ + N+ N SQCD Sbjct: 339 ALTNNYQEADTGTKMIHIGNNTKSKIISKGISAGKSKNSYRGLVKIGPQSFNSRNYSQCD 398 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGF 315 SLLIG + ANT+P IQV + +VEHEASTSKI EDQ+FYF QRGI+ E++V+ MI GF Sbjct: 399 SLLIGQSSQANTFPYIQVQNPTAKVEHEASTSKISEDQIFYFLQRGINLEESVSLMISGF 458 Query: 314 CRAVFEHLPYEFAQEVDALMNLKLEGSVG 228 C+ VF LP EFA E D L++LKLEG+VG Sbjct: 459 CKDVFNELPMEFAVEADRLLSLKLEGTVG 487
>YCF24_GUITH (O78473) Hypothetical UPF0051 protein ycf24| Length = 483 Score = 191 bits (484), Expect = 2e-48 Identities = 97/149 (65%), Positives = 116/149 (77%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 ALT +YQQADTGTKMIH G+ S+SRIISKGISAG S+N YRG V++N A + N+SQCD Sbjct: 335 ALTNNYQQADTGTKMIHVGRGSKSRIISKGISAGYSKNTYRGQVKININALGSINNSQCD 394 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGF 315 S+LIG + ANTYP IQV RVEHEASTSKI E+QLFYF QRGI E+A++ +I GF Sbjct: 395 SMLIGPYSQANTYPYIQVSNAMSRVEHEASTSKIEEEQLFYFLQRGISVEQAISLLISGF 454 Query: 314 CRAVFEHLPYEFAQEVDALMNLKLEGSVG 228 CR VF LP EFA E D L+++KLEG+VG Sbjct: 455 CRDVFVKLPMEFAVEADKLLSVKLEGTVG 483
>YCF24_ANTSP (Q02857) Hypothetical UPF0051 protein in atpA 3'region (ORF 3)| (Fragment) Length = 297 Score = 184 bits (467), Expect = 2e-46 Identities = 92/149 (61%), Positives = 114/149 (76%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 ALT +YQQADTG+KMIH GKN++SRI+SKGISAG S N YRGLV++ A + N SQCD Sbjct: 149 ALTNNYQQADTGSKMIHIGKNTKSRILSKGISAGYSANSYRGLVKIGPKAHYSRNYSQCD 208 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGF 315 SLL+ + + ANT+P IQ ++EHEASTSKIGE+Q+FYF QRGI+ E A++ MI GF Sbjct: 209 SLLLSNTSKANTFPYIQAQNPYTKIEHEASTSKIGEEQIFYFLQRGINLENAISLMISGF 268 Query: 314 CRAVFEHLPYEFAQEVDALMNLKLEGSVG 228 C+ V LP EFA E D L+NLKLEG+VG Sbjct: 269 CKEVLNELPMEFAVEADRLLNLKLEGTVG 297
>YCF24_GALSU (P35912) Hypothetical UPF0051 protein in atpA 3'region (ORF X)| (Fragment) Length = 221 Score = 183 bits (464), Expect = 5e-46 Identities = 93/149 (62%), Positives = 112/149 (75%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 ALT YQQADTG+KMIH GKNSRS+IISKGIS G S N YRG V+++ A A N SQCD Sbjct: 73 ALTNHYQQADTGSKMIHIGKNSRSKIISKGISTGNSINSYRGKVKVSLNASRARNYSQCD 132 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGF 315 SLLIG+ + ANT+P I+V S +EHEAS SKI E++LFYF QRGI E+A++ ++ GF Sbjct: 133 SLLIGNSSEANTFPYIEVYNRSSIIEHEASISKINEEKLFYFMQRGISIEEAISLIVSGF 192 Query: 314 CRAVFEHLPYEFAQEVDALMNLKLEGSVG 228 C+ VF LP EFA E D L+ LKLEGSVG Sbjct: 193 CKEVFTELPLEFALEADKLLGLKLEGSVG 221
>SUFB_SHIFL (Q83KW2) Protein sufB| Length = 495 Score = 172 bits (435), Expect = 1e-42 Identities = 86/149 (57%), Positives = 109/149 (73%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 ALT +QQADTGTKMIH GKN++S IISKGISAG S+N YRGLV++ A NA N +QCD Sbjct: 347 ALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCD 406 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGF 315 S+LIG A+T+P ++ S ++EHEA+TS+IGEDQLFY QRGI E A++ ++ GF Sbjct: 407 SMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGF 466 Query: 314 CRAVFEHLPYEFAQEVDALMNLKLEGSVG 228 C+ VF LP EFA E L+ + LE SVG Sbjct: 467 CKDVFSELPLEFAVEAQKLLAISLEHSVG 495
>SUFB_ECOLI (P77522) Protein sufB| Length = 495 Score = 172 bits (435), Expect = 1e-42 Identities = 86/149 (57%), Positives = 109/149 (73%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 ALT +QQADTGTKMIH GKN++S IISKGISAG S+N YRGLV++ A NA N +QCD Sbjct: 347 ALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCD 406 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGF 315 S+LIG A+T+P ++ S ++EHEA+TS+IGEDQLFY QRGI E A++ ++ GF Sbjct: 407 SMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGF 466 Query: 314 CRAVFEHLPYEFAQEVDALMNLKLEGSVG 228 C+ VF LP EFA E L+ + LE SVG Sbjct: 467 CKDVFSELPLEFAVEAQKLLAISLEHSVG 495
>YCF24_CYACA (Q9TLX2) Hypothetical UPF0051 protein ycf24| Length = 483 Score = 168 bits (425), Expect = 2e-41 Identities = 82/148 (55%), Positives = 111/148 (75%) Frame = -3 Query: 671 LTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDS 492 LT + Q+ADTGTKM+H G+ S+S +ISKGIS G S+N YRGLV+++ A + N SQCDS Sbjct: 336 LTNNAQEADTGTKMLHFGRQSKSLVISKGISGGVSKNTYRGLVKISGSAIYSDNRSQCDS 395 Query: 491 LLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFC 312 LLIG + +NTYP + V + +VEHEA S+IGE+Q+FYFQQRGI+ E+A+ ++ GFC Sbjct: 396 LLIGKGSESNTYPNLHVHNSLSKVEHEAFVSRIGEEQIFYFQQRGINIEEALNMIVSGFC 455 Query: 311 RAVFEHLPYEFAQEVDALMNLKLEGSVG 228 + V LP EFA E + L+N+KLEGS+G Sbjct: 456 QDVCNKLPMEFALEANKLLNIKLEGSIG 483
>Y1496_MYCBO (P67126) Hypothetical UPF0051 protein Mb1496 [Contains: Endonuclease| PI-MtuHIIP (EC 3.1.-.-) (Mtu pps1 intein)] Length = 846 Score = 127 bits (318), Expect = 4e-29 Identities = 59/149 (39%), Positives = 95/149 (63%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 A + Q DTG KM+H N+ S I+SK ++ G R YRGLVQ+N GA + +S +CD Sbjct: 698 AFAGEDQHQDTGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCD 757 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGF 315 +LL+ + ++TYP + + + HEA+ SK+ E+QLFY RG+ ++A+A ++ GF Sbjct: 758 ALLVDTVSRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGF 817 Query: 314 CRAVFEHLPYEFAQEVDALMNLKLEGSVG 228 + + LP E+A E++ L+ L++EG+VG Sbjct: 818 VEPIAKELPMEYALELNRLIELQMEGAVG 846
>Y1461_MYCTU (P67125) Hypothetical UPF0051 protein Rv1461/MT1508 [Contains:| Endonuclease PI-MtuHIIP (EC 3.1.-.-) (Mtu pps1 intein)] Length = 846 Score = 127 bits (318), Expect = 4e-29 Identities = 59/149 (39%), Positives = 95/149 (63%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 A + Q DTG KM+H N+ S I+SK ++ G R YRGLVQ+N GA + +S +CD Sbjct: 698 AFAGEDQHQDTGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCD 757 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGF 315 +LL+ + ++TYP + + + HEA+ SK+ E+QLFY RG+ ++A+A ++ GF Sbjct: 758 ALLVDTVSRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGF 817 Query: 314 CRAVFEHLPYEFAQEVDALMNLKLEGSVG 228 + + LP E+A E++ L+ L++EG+VG Sbjct: 818 VEPIAKELPMEYALELNRLIELQMEGAVG 846
>Y593_MYCLE (Q49689) Hypothetical UPF0051 protein ML0593 [Contains: Mle pps1| intein] Length = 869 Score = 126 bits (317), Expect = 5e-29 Identities = 59/149 (39%), Positives = 95/149 (63%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 A + Q DTG KM+H N+ S I+SK ++ G R YRGLVQ+N GA + +S +CD Sbjct: 721 AFAGEGQHQDTGAKMLHLASNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCD 780 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGF 315 +LL+ + ++TYP + + + HEA+ SK+ E+QLFY RG+ ++A+A ++ GF Sbjct: 781 ALLVDTISRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLAEDEAMAMVVRGF 840 Query: 314 CRAVFEHLPYEFAQEVDALMNLKLEGSVG 228 + + LP E+A E++ L+ L++EG+VG Sbjct: 841 VEPIAKELPMEYALELNRLIELQMEGAVG 869
>Y1385_PYRHO (O50093) Hypothetical UPF0051 protein PH1385| Length = 446 Score = 77.8 bits (190), Expect = 3e-14 Identities = 43/137 (31%), Positives = 68/137 (49%) Frame = -3 Query: 647 DTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAA 468 D G +M +G+ R SK + +S RG + + + S CD+LL+ DKA Sbjct: 310 DLGGEMHLQGEGGRGINASKSVIMDESTVITRGKIVAEAKKTKGHIS--CDALLLSDKAR 367 Query: 467 ANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLP 288 TYP + + HEA+ KI E++LFY RG+ EKA ++ GF + + +P Sbjct: 368 METYPGLVSLVDEAELSHEAAIGKIKEEELFYLMSRGLSEEKATQLIVKGFVEPMLKDIP 427 Query: 287 YEFAQEVDALMNLKLEG 237 EF E+ ++ L + G Sbjct: 428 IEFVVEIKKIIELAVSG 444
>Y1150_METTH (O27218) Hypothetical UPF0051 protein MTH1150| Length = 410 Score = 68.6 bits (166), Expect = 2e-11 Identities = 35/137 (25%), Positives = 68/137 (49%) Frame = -3 Query: 647 DTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAA 468 D G+++I +G+ S + ++S+ +S S+ RG + +C L++ D + Sbjct: 275 DMGSRVILEGRGSSAEMVSRAVSKDSSQIYSRG--HLAGRVPEVKGHLECHGLVLSDDSM 332 Query: 467 ANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLP 288 P ++ T + HEA+ KI E+++ Y RG+ E+A + ++ GF LP Sbjct: 333 IYAVPELEGSATELEMSHEAAVGKIAEEEVMYLTSRGLTEEEAASMIVRGFLSMDITGLP 392 Query: 287 YEFAQEVDALMNLKLEG 237 E A E ++++ L+G Sbjct: 393 PELAAETKRMLDMSLKG 409
>YB50_METTW (Q50519) Hypothetical UPF0051 protein MTH1150 homolog (ORF2)| Length = 410 Score = 67.0 bits (162), Expect = 5e-11 Identities = 34/137 (24%), Positives = 68/137 (49%) Frame = -3 Query: 647 DTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAA 468 D G+++I +G+ S + ++S+ +S S+ RG + +C L++ D + Sbjct: 275 DMGSRVILEGRGSSAEMVSRAVSKDASQIYSRG--HLAGRVPEVKGHLECHGLVLSDDSM 332 Query: 467 ANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLP 288 P ++ T + HEA+ KI E+++ Y RG+ ++A + ++ GF LP Sbjct: 333 IYAVPELEGSATELEMSHEAAVGKIAEEEVMYLTSRGLTEDEAASMIVRGFLSMDITGLP 392 Query: 287 YEFAQEVDALMNLKLEG 237 E A E ++++ L+G Sbjct: 393 PELAAETKRMLDMSLKG 409
>Y2365_ARCFU (O30305) Hypothetical UPF0051 protein AF2365| Length = 369 Score = 64.3 bits (155), Expect = 3e-10 Identities = 34/120 (28%), Positives = 63/120 (52%) Frame = -3 Query: 647 DTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAA 468 D+G++ + G+NSR+ IIS+ IS G + RG + A +C L++ + Sbjct: 234 DSGSRAVLMGENSRAEIISRTISKG-GKIIARG--HIIGDAPEVKGHLECKGLMLSESGL 290 Query: 467 ANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLP 288 + P ++ + + HEA+ KI E+ +FY RG+ ++A++A++ GF + LP Sbjct: 291 IDAIPELEARYPNVELSHEAAIGKIAEEGIFYLMSRGLSRDEAISAIVRGFMEIEIKGLP 350
>SUFD_ECOLI (P77689) Protein sufD| Length = 423 Score = 58.2 bits (139), Expect = 2e-08 Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 1/138 (0%) Frame = -3 Query: 647 DTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAA 468 DT T + H SR + K I + K R + GL+ + A ++LL+G A Sbjct: 283 DTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAE 342 Query: 467 ANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLP 288 +T P +++ + H A+ +I ++Q+FY + RGI+ + A +I F + E L Sbjct: 343 VDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALR 402 Query: 287 YE-FAQEVDALMNLKLEG 237 E Q+V A + +L G Sbjct: 403 DEGLKQQVLARIGQRLPG 420
>Y076_SYNY3 (Q55792) Hypothetical UPF0051 protein slr0076| Length = 453 Score = 45.1 bits (105), Expect = 2e-04 Identities = 27/123 (21%), Positives = 57/123 (46%) Frame = -3 Query: 656 QQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGD 477 Q +DT + + + + + K I ++ + G V + A+ +L++ Sbjct: 314 QVSDTHSTIALNHPHGATNQLHKCIVDEYAQAVFSGKVLVPQAAQLTNAQQLNRNLVLSS 373 Query: 476 KAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFE 297 KA NT P +Q+ + + H A+ S++ D++FY + RG++ A +I F + + Sbjct: 374 KARINTKPELQITADNVKCSHGATISQLEADEVFYLRSRGLNDYDARHLLIDAFAGEILD 433 Query: 296 HLP 288 +P Sbjct: 434 QIP 436
>Y1497_MYCBO (P59973) Hypothetical UPF0051 protein Mb1497| Length = 397 Score = 37.4 bits (85), Expect = 0.042 Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 10/126 (7%) Frame = -3 Query: 662 DYQQADTGTKMIHKGKNSRSRIISKGISAGK-------SRNCYRGLVQMNSGAENAYNSS 504 D Q ++ + H + +S ++ KG G + + G V + + A Sbjct: 237 DGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFE 296 Query: 503 QCDSLLIGDKAAANTYPTIQVGCTSGRVE---HEASTSKIGEDQLFYFQQRGIDHEKAVA 333 +L++ D A A++ P +++ +G + H ++T + ++QLFY + RGI +A Sbjct: 297 VNRNLVLTDGARADSVPNLEI--ETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARR 354 Query: 332 AMIGGF 315 ++ GF Sbjct: 355 LVVRGF 360
>Y1462_MYCTU (O53153) Hypothetical UPF0051 protein Rv1462/MT1509| Length = 397 Score = 37.4 bits (85), Expect = 0.042 Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 10/126 (7%) Frame = -3 Query: 662 DYQQADTGTKMIHKGKNSRSRIISKGISAGK-------SRNCYRGLVQMNSGAENAYNSS 504 D Q ++ + H + +S ++ KG G + + G V + + A Sbjct: 237 DGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFE 296 Query: 503 QCDSLLIGDKAAANTYPTIQVGCTSGRVE---HEASTSKIGEDQLFYFQQRGIDHEKAVA 333 +L++ D A A++ P +++ +G + H ++T + ++QLFY + RGI +A Sbjct: 297 VNRNLVLTDGARADSVPNLEI--ETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARR 354 Query: 332 AMIGGF 315 ++ GF Sbjct: 355 LVVRGF 360
>MRC2_RAT (Q4TU93) Macrophage mannose receptor 2 precursor (Endocytic| receptor 180) (CD280 antigen) Length = 1480 Score = 36.6 bits (83), Expect = 0.071 Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 8/107 (7%) Frame = -3 Query: 530 GAENAYNSSQCDSLL--IGDKAAANTYPTIQV--GCTSGRVEHEASTSKIGEDQLFYFQQ 363 G E +N S C+ L I KA + T + GC G H S +GEDQ+ Y Sbjct: 485 GPEGRWNDSPCNQSLPSICKKAGRLSQGTAEEDHGCRKGWTWHSPSCYWLGEDQVIYSDA 544 Query: 362 RGI--DHEKAVAAMIGGFCRAVFEHLPYEFAQEV--DALMNLKLEGS 234 R + DH + + F +A L Y + E AL +L GS Sbjct: 545 RRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQDLNSTGS 591
>Y034_METJA (Q60349) Hypothetical UPF0051 protein MJ0034| Length = 316 Score = 36.2 bits (82), Expect = 0.093 Identities = 25/119 (21%), Positives = 56/119 (47%) Frame = -3 Query: 674 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 495 A+ +D + + K+ G+N++ I S+G + S+ + +++ A + C Sbjct: 198 AIKEDVVKVNEVVKL--NGENAKCIIKSRGAAMDNSKISLK--LKIEGNAPYSKGHIDCA 253 Query: 494 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGG 318 ++ G+ A + P + V R+ HEA+ + + QL +G+D ++A ++ G Sbjct: 254 EIVKGN-AEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLDEDEATEIIVKG 311
>Y594_MYCLE (Q49682) Hypothetical UPF0051 protein ML0594| Length = 392 Score = 35.0 bits (79), Expect = 0.21 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 8/124 (6%) Frame = -3 Query: 662 DYQQADTGTKMIHKGKNSRSRIISKGISAGK-------SRNCYRGLVQMNSGAENAYNSS 504 D Q ++ + H + +S ++ KG G + + G V ++ A Sbjct: 234 DGQHLESRLLVDHAHPDCKSNVLYKGALQGDPVSSRPDAHTVWVGDVLIHPEATGTDTFE 293 Query: 503 QCDSLLIGDKAAANTYPTIQVGCTS-GRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAM 327 +L++ + A++ P +++ H ++T + ++QLFY + RGI E+A + Sbjct: 294 VNRNLVLTNGVRADSVPNLEIETDEIVGAGHASATGRFDDEQLFYLRSRGIGEEQARRLL 353 Query: 326 IGGF 315 + GF Sbjct: 354 VRGF 357
>MRC2_MOUSE (Q64449) Macrophage mannose receptor 2 precursor (Lectin lambda)| (CD280 antigen) Length = 1479 Score = 34.7 bits (78), Expect = 0.27 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 8/107 (7%) Frame = -3 Query: 530 GAENAYNSSQCDSLL--IGDKAAANTYPTIQV--GCTSGRVEHEASTSKIGEDQLFYFQQ 363 G E +N S C+ L I KA + + GC G H S +GEDQ+ Y Sbjct: 485 GPEGRWNDSPCNQSLPSICKKAGRLSQGAAEEDHGCRKGWTWHSPSCYWLGEDQVIYSDA 544 Query: 362 RGI--DHEKAVAAMIGGFCRAVFEHLPYEFAQEV--DALMNLKLEGS 234 R + DH + + F +A L Y + E AL +L GS Sbjct: 545 RRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQDLNSTGS 591
>MRC2_HUMAN (Q9UBG0) Macrophage mannose receptor 2 precursor (Urokinase| receptor-associated protein) (Endocytic receptor 180) (CD280 antigen) Length = 1479 Score = 34.7 bits (78), Expect = 0.27 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 8/107 (7%) Frame = -3 Query: 530 GAENAYNSSQCDSLL--IGDKAAANTYPTIQV--GCTSGRVEHEASTSKIGEDQLFYFQQ 363 G E +N S C+ L I KA + + GC G H S +GEDQ+ Y + Sbjct: 486 GPEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGWTWHSPSCYWLGEDQVTYSEA 545 Query: 362 RGI--DHEKAVAAMIGGFCRAVFEHLPYEFAQEV--DALMNLKLEGS 234 R + DH + + F +A L Y + E AL +L GS Sbjct: 546 RRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQDLNSTGS 592
>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic| isoform 3 (EC 1.6.5.4) (MDAR 3) Length = 434 Score = 32.7 bits (73), Expect = 1.0 Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 3/122 (2%) Frame = -3 Query: 620 GKNSRSRIISKGISAGKSRNCYRGLVQMNSGA---ENAYNSSQCDSLLIGDKAAANTYPT 450 G+ + I+ G+ A + ++G V+ + G + + +S D +GD A T+P Sbjct: 247 GRTLEADIVIVGVGAKPLTSLFKGQVEEDKGGIKTDAFFKTSVPDVYAVGDVA---TFPL 303 Query: 449 IQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQE 270 G RVEH + K E + KA+ A GG +++LP+ +++ Sbjct: 304 KMYGDVR-RVEHVDHSRKSAEQAV-----------KAIKAAEGGAAVEEYDYLPFFYSRS 351 Query: 269 VD 264 D Sbjct: 352 FD 353
>Y779_LACPL (Q88YI4) UPF0042 protein lp_0779| Length = 294 Score = 31.2 bits (69), Expect = 3.0 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -3 Query: 506 SQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGE 387 S +S++ G +A + TI +GCT G+ A T +IGE Sbjct: 230 SMLESIMPGYEAEGKSSLTIAIGCTGGQHRSVALTQRIGE 269
>T7L1A_XENLA (P70062) Transcription factor 7-like 1-A (HMG box transcription| factor 3-A) (TCF-3-A) (xTcf-3) Length = 554 Score = 30.4 bits (67), Expect = 5.1 Identities = 39/142 (27%), Positives = 54/142 (38%) Frame = +2 Query: 215 NQELSQLIPPASGS*VHPPPGQTRKEGVQRRPYRIHRSWLQRPFHDLSPFAESKTAGPLQ 394 N+ S PP H P K G+ R P+ S P++ LSP A + PL Sbjct: 177 NEHFSPGTPPG-----HLSPEIDPKTGIPRPPHPSELS----PYYPLSPGAVGQIPHPLG 227 Query: 395 FWMCLLHAQHGH*YNPPEWWDRC*QQPCPQSAMNHTEKSYTHSLHLNSSGPAHGSNSLTS 574 + L+ Q Y+ P R P P AMN + S S P + TS Sbjct: 228 W---LVPPQGQPMYSIPPGGFR---HPYPALAMNASMSSLVSSRFSPHMVPPPHHSLHTS 281 Query: 575 PLRYPWI*SGCVNSSPCGSSLS 640 + +P I S V P ++S Sbjct: 282 GIPHPAIVSPIVKQEPSSGNIS 303
>T7L1D_XENLA (P70064) Transcription factor 7-like 1-D (HMG box transcription| factor 3-D) (TCF-3-D) (xTcf-3d) Length = 550 Score = 30.4 bits (67), Expect = 5.1 Identities = 39/142 (27%), Positives = 54/142 (38%) Frame = +2 Query: 215 NQELSQLIPPASGS*VHPPPGQTRKEGVQRRPYRIHRSWLQRPFHDLSPFAESKTAGPLQ 394 N+ S PP H P K G+ R P+ S P++ LSP A + PL Sbjct: 176 NEHFSPGTPPG-----HLSPEIDPKTGIPRPPHPSELS----PYYPLSPGAVGQIPHPLG 226 Query: 395 FWMCLLHAQHGH*YNPPEWWDRC*QQPCPQSAMNHTEKSYTHSLHLNSSGPAHGSNSLTS 574 + L+ Q Y+ P R P P AMN + S S P + TS Sbjct: 227 W---LVPQQGQPMYSIPPGGFR---HPYPALAMNASMSSLVSSRFSPHMVPPPHHSLHTS 280 Query: 575 PLRYPWI*SGCVNSSPCGSSLS 640 + +P I S V P ++S Sbjct: 281 GIPHPAIVSPIVKQEPSSGNIS 302
>GUN6_DICDI (P22699) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Spore germination protein 270-6) (Cellulase) Length = 705 Score = 30.4 bits (67), Expect = 5.1 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -2 Query: 276 PGGGCTYEPEAGGISWLSSW 217 PGGG TY P GG++W+ W Sbjct: 318 PGGGVTYTP--GGLAWIRQW 335
>T7L1B_XENLA (Q90ZB6) Transcription factor 7-like 1-B (HMG box transcription| factor 3-B) (TCF-3-B) (xTcf-3) Length = 551 Score = 30.4 bits (67), Expect = 5.1 Identities = 39/142 (27%), Positives = 54/142 (38%) Frame = +2 Query: 215 NQELSQLIPPASGS*VHPPPGQTRKEGVQRRPYRIHRSWLQRPFHDLSPFAESKTAGPLQ 394 N+ S PP H P K G+ R P+ S P++ LSP A + PL Sbjct: 177 NEHFSPGTPPG-----HLSPEIDPKTGIPRPPHPSELS----PYYPLSPGAVGQIPHPLG 227 Query: 395 FWMCLLHAQHGH*YNPPEWWDRC*QQPCPQSAMNHTEKSYTHSLHLNSSGPAHGSNSLTS 574 + L+ Q Y+ P R P P AMN + S S P + TS Sbjct: 228 W---LVPQQGQPMYSIPPGGFR---HPYPALAMNASMSSLVSSRFSPHMVPPPHHSLHTS 281 Query: 575 PLRYPWI*SGCVNSSPCGSSLS 640 + +P I S V P ++S Sbjct: 282 GIPHPAIVSPIVKQEPSSGNIS 303
>NEUV_CHICK (P24787) Vasotocin-neurophysin VT precursor [Contains: Vasotocin| (VT); Neurophysin VT] Length = 161 Score = 30.0 bits (66), Expect = 6.7 Identities = 14/43 (32%), Positives = 17/43 (39%) Frame = -3 Query: 620 GKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDS 492 G +R R GI G CY G + AE Y S C + Sbjct: 45 GPGNRGRCFGPGICCGAELGCYLGTAETRRCAEEDYMPSPCQA 87
>HCYG_OCTDO (O61363) Hemocyanin G-type, units Oda to Odg| Length = 2896 Score = 29.6 bits (65), Expect = 8.7 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +2 Query: 86 VHLSCNLFFSVSYCCCTHGHMDFLDDHRMV 175 + LSC+ +Y CC HG + F + HR++ Sbjct: 2545 IPLSCHYENGTAYACCQHGMVTFPNWHRLL 2574
>HCYA_OCTDO (P12659) Hemocyanin A-type, units Ode to Odg (Fragment)| Length = 1233 Score = 29.6 bits (65), Expect = 8.7 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +2 Query: 86 VHLSCNLFFSVSYCCCTHGHMDFLDDHRMV 175 + LSC+ +Y CC HG + F + HR++ Sbjct: 882 IPLSCHYENGTAYACCQHGMVTFPNWHRLL 911 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 110,058,520 Number of Sequences: 219361 Number of extensions: 2479399 Number of successful extensions: 5607 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5411 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5602 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
