ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18g24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009268.1| Triticum aestivum clone wlk8.pk0002.f4:fis, full ... 904 0.0
2ref|NM_190436.1| Oryza sativa (japonica cultivar-group), predic... 442 e-121
3dbj|AK121100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 442 e-121
4gb|AY103958.1| Zea mays PCO141591 mRNA sequence 432 e-118
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 258 2e-65
6dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic D... 258 2e-65
7dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 258 2e-65
8gb|AY943856.1| Nicotiana benthamiana non-intrinsic ABC protein m... 70 1e-08
9gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 56 2e-04
10gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 50 0.010
11dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 50 0.010
12gb|AE016828.2| Coxiella burnetii RSA 493, complete genome 48 0.038
13gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 48 0.038
14gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 46 0.15
15gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome... 44 0.59
16gb|AF329697.1| Xanthomonas oryzae pv. oryzae insertion sequence ... 44 0.59
17dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 44 0.59
18gb|AE012389.1| Xanthomonas campestris pv. campestris str. ATCC 3... 44 0.59
19gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 44 0.59
20gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 44 0.59
21ref|NM_116715.3| Arabidopsis thaliana ATABC1 AT4G04770 (ATABC1) ... 42 2.3
22gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 42 2.3
23gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.3
24ref|XM_756437.1| Ustilago maydis 521 hypothetical protein (UM053... 42 2.3
25ref|XM_567032.1| Cryptococcus neoformans var. neoformans JEC21 s... 42 2.3
26emb|AL161501.2|ATCHRIV13 Arabidopsis thaliana DNA chromosome 4, ... 42 2.3
27gb|AY142069.1| Arabidopsis thaliana At4g04770/T4B21_16 mRNA, com... 42 2.3
28emb|BX537928.1|HSM806046 Homo sapiens genomic DNA; cDNA DKFZp686... 42 2.3
29gb|AC092421.2| Homo sapiens chromosome 3 clone RP11-476A24, comp... 42 2.3
30gb|AY056410.1| Arabidopsis thaliana AT4g04770/T4B21_16 mRNA, com... 42 2.3
31gb|AY052195.1| Arabidopsis thaliana AT4g04770/T4B21_16 mRNA, com... 42 2.3
32gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 2.3
33tpg|BK001497.1| TPA: TPA_exp: Arabidopsis thaliana putative ABC ... 42 2.3
34emb|BX827948.1|CNS0A3VL Arabidopsis thaliana Full-length cDNA Co... 42 2.3
35emb|BX827675.1|CNS0A3OT Arabidopsis thaliana Full-length cDNA Co... 42 2.3
36gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 42 2.3
37dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 42 2.3
38gb|AF118223.2|T4B21 Arabidopsis thaliana BAC T4B21 42 2.3
39gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 9.2
40gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 9.2
41gb|BC070011.1| Danio rerio zgc:73404, mRNA (cDNA clone MGC:85750... 40 9.2
42gb|AC182692.2| Populus trichocarpa clone Pop1-44B2, complete seq... 40 9.2
43gb|AC145516.4| Mus musculus BAC clone RP24-157K17 from chromosom... 40 9.2
44gb|AC123928.3| Mus musculus BAC clone RP24-390L8 from chromosome... 40 9.2
45gb|AC145607.3| Mus musculus BAC clone RP24-270N6 from chromosome... 40 9.2
46gb|AY376457.1| Meriones unguiculatus follicle stimulating hormon... 40 9.2
47gb|AC144627.2| Mus musculus BAC clone RP24-164A21 from chromosom... 40 9.2
48gb|AC145563.2| Mus musculus BAC clone RP24-75L3 from chromosome ... 40 9.2
49gb|AC145566.4| Mus musculus BAC clone RP24-79A15 from chromosome... 40 9.2
50gb|AC144857.3| Mus musculus BAC clone RP24-168C21 from chromosom... 40 9.2
51gb|AC132295.4| Mus musculus BAC clone RP24-325L5 from chromosome... 40 9.2
52emb|BX928750.9| Zebrafish DNA sequence from clone DKEY-162P13 in... 40 9.2
53gb|AC016827.7|ATAC016827 Arabidopsis thaliana chromosome III BAC... 40 9.2
54gb|AC127678.9| Mus musculus BAC clone RP24-233M12 from chromosom... 40 9.2
55gb|DQ277922.1| Mus musculus clone Bgal-Synd+.08b immunoglobulin ... 40 9.2
56gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 9.2
57emb|AL121837.33|HSJ988J12 Human DNA sequence from clone RP5-988J... 40 9.2
58emb|BX323565.10| Zebrafish DNA sequence from clone DKEYP-95B12 i... 40 9.2
59gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 9.2
60gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 9.2
61gb|AC175526.4| Mus musculus BAC clone RP24-84E22 from chromosome... 40 9.2
62gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 9.2
63gb|AC175668.3| Mus musculus BAC clone RP24-319G11 from chromosom... 40 9.2
64gb|AC134557.4| Mus musculus chromosome UNK clone RP24-323H18, co... 40 9.2
65gb|AC142129.4| Rattus norvegicus BAC CH230-183M21 (Children's H... 40 9.2
66gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 9.2
67emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, c... 40 9.2 
>gb|BT009268.1| Triticum aestivum clone wlk8.pk0002.f4:fis, full insert mRNA sequence
          Length = 1919

 Score =  904 bits (456), Expect = 0.0
 Identities = 565/599 (94%), Gaps = 3/599 (0%)
 Strand = Plus / Minus

                                                                        
Query: 68   ttatacaagccatgaaacgtccatttatcatgtaatttattcttctcagtctcatactgc 127
            |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 1828 ttatacaagccatgaaacgtccttttatcatgtaacttattcttctcagtctcatactgc 1769

                                                                        
Query: 128  tgctgtacacatggtcacatggacttcct-agatgaccatcgtatggtatttcagataat 186
            |||||||||  |||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 1768 tgctgtaca--tggtcacatggacttccttagataaccatcgtatggtatttcagataat 1711

                                                                        
Query: 187  tatcggatgatatttcacatacttgttgaaccaagaacttagccaactgatccctccagc 246
            |||||| ||||||||| || |||||||||||||| |||||||||||||||||||||||||
Sbjct: 1710 tatcgggtgatatttcgcagacttgttgaaccaataacttagccaactgatccctccagc 1651

                                                                        
Query: 247  ttcaggttcataagtgcatccacctcctgggcaaactcgtaaggaaggtgttcaaagacg 306
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1650 ttcaggttcattagtgcatccacctcctgggcaaactcgtaaggaaggtgttcaaagacg 1591

                                                                        
Query: 307  gccctacagaatccaccgatcatggctgcaacggccttttcatgatctatccccctttgc 366
            || |||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1590 gctctacagaacccacctatcatggctgcaacggccttttcatgatcaatccctctttgc 1531

                                                                        
Query: 367  tgaaagtaaaacagctggtcctctccaattttggatgtgcttgcttcatgctcaacacgg 426
            |||||||| || ||||| ||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 1530 tgaaagtagaatagctgatcctcgccaattttggatgtgcttgcctcatgctcaacacgg 1471

                                                                        
Query: 427  ccactagtacaacccacctgaatggtgggataggtgttagcagcagccttgtccccaatc 486
            |||||||| ||||||||||||||||| ||||||||||| || ||||| ||||||||||||
Sbjct: 1470 ccactagtgcaacccacctgaatggtcggataggtgttggcggcagcgttgtccccaatc 1411

                                                                        
Query: 487  agcaatgaatcacactgagaagagttatacgcattctctgcacctgaattcatctggacc 546
            ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1410 agcaatgaatcacactgcgaagaattataagcattctctgcacctgaattcatctggacc 1351

                                                                        
Query: 547  agcccacggtagcaattccttgacttccccgctgagatacccttggatataatccggctg 606
            |||||||||||||||||||||||||| || || |||||||| ||||||||||||||||||
Sbjct: 1350 agcccacggtagcaattccttgactttcctgccgagatacctttggatataatccggctg 1291

                                                                       
Query: 607  cgtgaattcttccccttgtggatcatctttgtccctgtatcggcctgctggtaatcctt 665
            ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1290 cgtgaattcttccccttatggatcatctttgtccctgtatcggcctgctggtaatcctt 1232



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 47/49 (95%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 6    aaaatggacagacaaaagagaagcgccacggttctcttcgctgtcgtgg 54
            |||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 1880 aaaatggaca-acaaaagagaagcgccgcggttctcttcgctgtcgtgg 1833
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>ref|NM_190436.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1635

 Score =  442 bits (223), Expect = e-121
 Identities = 388/443 (87%)
 Strand = Plus / Minus

                                                                        
Query: 229  ccaactgatccctccagcttcaggttcataagtgcatccacctcctgggcaaactcgtaa 288
            |||||||||||||| ||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 1631 ccaactgatccctcaagcttcaggttcataagtgcatccatctcatgtgcaaactcgtaa 1572

                                                                        
Query: 289  ggaaggtgttcaaagacggccctacagaatccaccgatcatggctgcaacggccttttca 348
            ||||| |  || || || ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 1571 ggaagattctcgaaaacagccctgcagaatccaccaatcatcgctgcaacagccttttca 1512

                                                                        
Query: 349  tgatctatccccctttgctgaaagtaaaacagctggtcctctccaattttggatgtgctt 408
            || |||||||||||||| || || ||||| ||||||||||| || ||||| || ||||||
Sbjct: 1511 tggtctatccccctttgttggaaataaaatagctggtcctcccctatttttgaagtgctt 1452

                                                                        
Query: 409  gcttcatgctcaacacggccactagtacaacccacctgaatggtgggataggtgttagca 468
            || |||||||||||||| | |  | | |||||||||||||| || ||||||||||| |||
Sbjct: 1451 gcctcatgctcaacacgactagaaatgcaacccacctgaatagtcggataggtgttggca 1392

                                                                        
Query: 469  gcagccttgtccccaatcagcaatgaatcacactgagaagagttatacgcattctctgca 528
            ||||| || |||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 1391 gcagcgttatccccaatcagcaaagaatcacactgtgaagaattataagcattttctgcg 1332

                                                                        
Query: 529  cctgaattcatctggaccagcccacggtagcaattccttgacttccccgctgagataccc 588
            ||||| || |||||||||| ||||||||||||||||| ||||||||| ||||||||||| 
Sbjct: 1331 cctgagtttatctggaccaacccacggtagcaattccgtgacttcccagctgagatacct 1272

                                                                        
Query: 589  ttggatataatccggctgcgtgaattcttccccttgtggatcatctttgtccctgtatcg 648
            |||||||||||||| || || |||||||| |||||||||||||| ||||||||||| || 
Sbjct: 1271 ttggatataatccgactccgcgaattctttcccttgtggatcatttttgtccctgtgtct 1212

                                   
Query: 649  gcctgctggtaatccttagtcag 671
            ||||||||||||||||| |||||
Sbjct: 1211 gcctgctggtaatccttcgtcag 1189
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>dbj|AK121100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069G03, full
            insert sequence
          Length = 1978

 Score =  442 bits (223), Expect = e-121
 Identities = 388/443 (87%)
 Strand = Plus / Minus

                                                                        
Query: 229  ccaactgatccctccagcttcaggttcataagtgcatccacctcctgggcaaactcgtaa 288
            |||||||||||||| ||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 1677 ccaactgatccctcaagcttcaggttcataagtgcatccatctcatgtgcaaactcgtaa 1618

                                                                        
Query: 289  ggaaggtgttcaaagacggccctacagaatccaccgatcatggctgcaacggccttttca 348
            ||||| |  || || || ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 1617 ggaagattctcgaaaacagccctgcagaatccaccaatcatcgctgcaacagccttttca 1558

                                                                        
Query: 349  tgatctatccccctttgctgaaagtaaaacagctggtcctctccaattttggatgtgctt 408
            || |||||||||||||| || || ||||| ||||||||||| || ||||| || ||||||
Sbjct: 1557 tggtctatccccctttgttggaaataaaatagctggtcctcccctatttttgaagtgctt 1498

                                                                        
Query: 409  gcttcatgctcaacacggccactagtacaacccacctgaatggtgggataggtgttagca 468
            || |||||||||||||| | |  | | |||||||||||||| || ||||||||||| |||
Sbjct: 1497 gcctcatgctcaacacgactagaaatgcaacccacctgaatagtcggataggtgttggca 1438

                                                                        
Query: 469  gcagccttgtccccaatcagcaatgaatcacactgagaagagttatacgcattctctgca 528
            ||||| || |||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 1437 gcagcgttatccccaatcagcaaagaatcacactgtgaagaattataagcattttctgcg 1378

                                                                        
Query: 529  cctgaattcatctggaccagcccacggtagcaattccttgacttccccgctgagataccc 588
            ||||| || |||||||||| ||||||||||||||||| ||||||||| ||||||||||| 
Sbjct: 1377 cctgagtttatctggaccaacccacggtagcaattccgtgacttcccagctgagatacct 1318

                                                                        
Query: 589  ttggatataatccggctgcgtgaattcttccccttgtggatcatctttgtccctgtatcg 648
            |||||||||||||| || || |||||||| |||||||||||||| ||||||||||| || 
Sbjct: 1317 ttggatataatccgactccgcgaattctttcccttgtggatcatttttgtccctgtgtct 1258

                                   
Query: 649  gcctgctggtaatccttagtcag 671
            ||||||||||||||||| |||||
Sbjct: 1257 gcctgctggtaatccttcgtcag 1235



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 82   aaacgtccatttatcatgtaatttattcttctca 115
            |||||||||||  ||||| |||||||||||||||
Sbjct: 1782 aaacgtccattgctcatgcaatttattcttctca 1749
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>gb|AY103958.1| Zea mays PCO141591 mRNA sequence
          Length = 1691

 Score =  432 bits (218), Expect = e-118
 Identities = 392/450 (87%)
 Strand = Plus / Minus

                                                                        
Query: 225  ttagccaactgatccctccagcttcaggttcataagtgcatccacctcctgggcaaactc 284
            |||||||||||||||||| || ||||||||||| ||||| ||||||||||| || || ||
Sbjct: 1389 ttagccaactgatccctcgagtttcaggttcatgagtgcgtccacctcctgtgcgaattc 1330

                                                                        
Query: 285  gtaaggaaggtgttcaaagacggccctacagaatccaccgatcatggctgcaacggcctt 344
             || |||||||| || || || |  || ||||||||||| |||||||| ||||| |||||
Sbjct: 1329 atagggaaggtgctcgaaaacagatctgcagaatccaccaatcatggcggcaactgcctt 1270

                                                                        
Query: 345  ttcatgatctatccccctttgctgaaagtaaaacagctggtcctctccaattttggatgt 404
            ||||||||||| ||| |||||||| || ||||| ||||| ||||||||||||||||| ||
Sbjct: 1269 ttcatgatctacccctctttgctggaaataaaatagctgatcctctccaattttggaagt 1210

                                                                        
Query: 405  gcttgcttcatgctcaacacggccactagtacaacccacctgaatggtgggataggtgtt 464
            |||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1209 gcttgcctcatgctcaacccggccactagtgcaccccacctgaatggtgggataggtgtt 1150

                                                                        
Query: 465  agcagcagccttgtccccaatcagcaatgaatcacactgagaagagttatacgcattctc 524
             ||||| || || ||||| |||| |||||| |||||||| ||||| ||||| ||||||||
Sbjct: 1149 cgcagccgcattatccccgatcaacaatgagtcacactgtgaagaattataagcattctc 1090

                                                                        
Query: 525  tgcacctgaattcatctggaccagcccacggtagcaattccttgacttccccgctgagat 584
            |||||  || |||||| ||||||  |||||||||||||||||||||||||| || |||||
Sbjct: 1089 tgcactagagttcatcaggaccaagccacggtagcaattccttgacttccctgcagagat 1030

                                                                        
Query: 585  acccttggatataatccggctgcgtgaattcttccccttgtggatcatctttgtccctgt 644
             ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 1029 gcccttggatataatccggctgcgtgaatttttccccttgtggatcattttcgtccctgt 970

                                          
Query: 645  atcggcctgctggtaatccttagtcagcgc 674
             || || |||||| ||||||| || |||||
Sbjct: 969  gtctgcttgctggcaatcctttgtaagcgc 940
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  258 bits (130), Expect = 2e-65
 Identities = 205/230 (89%)
 Strand = Plus / Plus

                                                                            
Query: 442      acctgaatggtgggataggtgttagcagcagccttgtccccaatcagcaatgaatcacac 501
                |||||||| || ||||||||||| |||||||| || |||||||||||||| |||||||||
Sbjct: 35500317 acctgaatagtcggataggtgttggcagcagcgttatccccaatcagcaaagaatcacac 35500376

                                                                            
Query: 502      tgagaagagttatacgcattctctgcacctgaattcatctggaccagcccacggtagcaa 561
                || ||||| ||||| ||||| ||||| ||||| || |||||||||| |||||||||||||
Sbjct: 35500377 tgtgaagaattataagcattttctgcgcctgagtttatctggaccaacccacggtagcaa 35500436

                                                                            
Query: 562      ttccttgacttccccgctgagatacccttggatataatccggctgcgtgaattcttcccc 621
                |||| ||||||||| ||||||||||| |||||||||||||| || || |||||||| |||
Sbjct: 35500437 ttccgtgacttcccagctgagatacctttggatataatccgactccgcgaattctttccc 35500496

                                                                  
Query: 622      ttgtggatcatctttgtccctgtatcggcctgctggtaatccttagtcag 671
                ||||||||||| ||||||||||| || ||||||||||||||||| |||||
Sbjct: 35500497 ttgtggatcatttttgtccctgtgtctgcctgctggtaatccttcgtcag 35500546



 Score =  200 bits (101), Expect = 4e-48
 Identities = 173/197 (87%)
 Strand = Plus / Plus

                                                                            
Query: 229      ccaactgatccctccagcttcaggttcataagtgcatccacctcctgggcaaactcgtaa 288
                |||||||||||||| ||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 35499073 ccaactgatccctcaagcttcaggttcataagtgcatccatctcatgtgcaaactcgtaa 35499132

                                                                            
Query: 289      ggaaggtgttcaaagacggccctacagaatccaccgatcatggctgcaacggccttttca 348
                ||||| |  || || || ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 35499133 ggaagattctcgaaaacagccctgcagaatccaccaatcatcgctgcaacagccttttca 35499192

                                                                            
Query: 349      tgatctatccccctttgctgaaagtaaaacagctggtcctctccaattttggatgtgctt 408
                || |||||||||||||| || || ||||| ||||||||||| || ||||| || ||||||
Sbjct: 35499193 tggtctatccccctttgttggaaataaaatagctggtcctcccctatttttgaagtgctt 35499252

                                 
Query: 409      gcttcatgctcaacacg 425
                || ||||||||||||||
Sbjct: 35499253 gcctcatgctcaacacg 35499269



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 82       aaacgtccatttatcatgtaatttattcttctca 115
                |||||||||||  ||||| |||||||||||||||
Sbjct: 35498968 aaacgtccattgctcatgcaatttattcttctca 35499001
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>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446G04
          Length = 143515

 Score =  258 bits (130), Expect = 2e-65
 Identities = 205/230 (89%)
 Strand = Plus / Plus

                                                                         
Query: 442   acctgaatggtgggataggtgttagcagcagccttgtccccaatcagcaatgaatcacac 501
             |||||||| || ||||||||||| |||||||| || |||||||||||||| |||||||||
Sbjct: 30504 acctgaatagtcggataggtgttggcagcagcgttatccccaatcagcaaagaatcacac 30563

                                                                         
Query: 502   tgagaagagttatacgcattctctgcacctgaattcatctggaccagcccacggtagcaa 561
             || ||||| ||||| ||||| ||||| ||||| || |||||||||| |||||||||||||
Sbjct: 30564 tgtgaagaattataagcattttctgcgcctgagtttatctggaccaacccacggtagcaa 30623

                                                                         
Query: 562   ttccttgacttccccgctgagatacccttggatataatccggctgcgtgaattcttcccc 621
             |||| ||||||||| ||||||||||| |||||||||||||| || || |||||||| |||
Sbjct: 30624 ttccgtgacttcccagctgagatacctttggatataatccgactccgcgaattctttccc 30683

                                                               
Query: 622   ttgtggatcatctttgtccctgtatcggcctgctggtaatccttagtcag 671
             ||||||||||| ||||||||||| || ||||||||||||||||| |||||
Sbjct: 30684 ttgtggatcatttttgtccctgtgtctgcctgctggtaatccttcgtcag 30733



 Score =  200 bits (101), Expect = 4e-48
 Identities = 173/197 (87%)
 Strand = Plus / Plus

                                                                         
Query: 229   ccaactgatccctccagcttcaggttcataagtgcatccacctcctgggcaaactcgtaa 288
             |||||||||||||| ||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 29260 ccaactgatccctcaagcttcaggttcataagtgcatccatctcatgtgcaaactcgtaa 29319

                                                                         
Query: 289   ggaaggtgttcaaagacggccctacagaatccaccgatcatggctgcaacggccttttca 348
             ||||| |  || || || ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 29320 ggaagattctcgaaaacagccctgcagaatccaccaatcatcgctgcaacagccttttca 29379

                                                                         
Query: 349   tgatctatccccctttgctgaaagtaaaacagctggtcctctccaattttggatgtgctt 408
             || |||||||||||||| || || ||||| ||||||||||| || ||||| || ||||||
Sbjct: 29380 tggtctatccccctttgttggaaataaaatagctggtcctcccctatttttgaagtgctt 29439

                              
Query: 409   gcttcatgctcaacacg 425
             || ||||||||||||||
Sbjct: 29440 gcctcatgctcaacacg 29456



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 82    aaacgtccatttatcatgtaatttattcttctca 115
             |||||||||||  ||||| |||||||||||||||
Sbjct: 29155 aaacgtccattgctcatgcaatttattcttctca 29188
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>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1088C09
          Length = 154084

 Score =  258 bits (130), Expect = 2e-65
 Identities = 205/230 (89%)
 Strand = Plus / Plus

                                                                          
Query: 442    acctgaatggtgggataggtgttagcagcagccttgtccccaatcagcaatgaatcacac 501
              |||||||| || ||||||||||| |||||||| || |||||||||||||| |||||||||
Sbjct: 124266 acctgaatagtcggataggtgttggcagcagcgttatccccaatcagcaaagaatcacac 124325

                                                                          
Query: 502    tgagaagagttatacgcattctctgcacctgaattcatctggaccagcccacggtagcaa 561
              || ||||| ||||| ||||| ||||| ||||| || |||||||||| |||||||||||||
Sbjct: 124326 tgtgaagaattataagcattttctgcgcctgagtttatctggaccaacccacggtagcaa 124385

                                                                          
Query: 562    ttccttgacttccccgctgagatacccttggatataatccggctgcgtgaattcttcccc 621
              |||| ||||||||| ||||||||||| |||||||||||||| || || |||||||| |||
Sbjct: 124386 ttccgtgacttcccagctgagatacctttggatataatccgactccgcgaattctttccc 124445

                                                                
Query: 622    ttgtggatcatctttgtccctgtatcggcctgctggtaatccttagtcag 671
              ||||||||||| ||||||||||| || ||||||||||||||||| |||||
Sbjct: 124446 ttgtggatcatttttgtccctgtgtctgcctgctggtaatccttcgtcag 124495



 Score =  200 bits (101), Expect = 4e-48
 Identities = 173/197 (87%)
 Strand = Plus / Plus

                                                                          
Query: 229    ccaactgatccctccagcttcaggttcataagtgcatccacctcctgggcaaactcgtaa 288
              |||||||||||||| ||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 123022 ccaactgatccctcaagcttcaggttcataagtgcatccatctcatgtgcaaactcgtaa 123081

                                                                          
Query: 289    ggaaggtgttcaaagacggccctacagaatccaccgatcatggctgcaacggccttttca 348
              ||||| |  || || || ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 123082 ggaagattctcgaaaacagccctgcagaatccaccaatcatcgctgcaacagccttttca 123141

                                                                          
Query: 349    tgatctatccccctttgctgaaagtaaaacagctggtcctctccaattttggatgtgctt 408
              || |||||||||||||| || || ||||| ||||||||||| || ||||| || ||||||
Sbjct: 123142 tggtctatccccctttgttggaaataaaatagctggtcctcccctatttttgaagtgctt 123201

                               
Query: 409    gcttcatgctcaacacg 425
              || ||||||||||||||
Sbjct: 123202 gcctcatgctcaacacg 123218



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 82     aaacgtccatttatcatgtaatttattcttctca 115
              |||||||||||  ||||| |||||||||||||||
Sbjct: 122917 aaacgtccattgctcatgcaatttattcttctca 122950
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>gb|AY943856.1| Nicotiana benthamiana non-intrinsic ABC protein mRNA, partial cds
          Length = 1638

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 612  attcttccccttgtggatcatctttgtccctgtatcggcctgctggtaatccttagtca 670
            ||||||||| ||||| |||||||||||||||||||| |||||||| ||||  |||||||
Sbjct: 1254 attcttccctttgtgtatcatctttgtccctgtatccgcctgctgataattattagtca 1196
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                       
Query: 622     ttgtggatcatctttgtccctgtatcggcctgctggtaat 661
               |||||||||||||| || || |||||||||||||||||||
Sbjct: 2581177 ttgtggatcatcttggtgccggtatcggcctgctggtaat 2581216
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 624     gtggatcatctttgtccctgtatcggcctgctg 656
               ||||||||||||||| || ||||||||||||||
Sbjct: 1833510 gtggatcatctttgtgccggtatcggcctgctg 1833478
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                    
Query: 623     tgtggatcatctttgtccctgtatcggcctgctggta 659
               ||||||||||||| || || |||||||||||||||||
Sbjct: 1466732 tgtggatcatcttagtgccggtatcggcctgctggta 1466696
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>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome
          Length = 1995281

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 382     tggtcctctccaattttggatgtgcttgcttcatgctcaacacg 425
               ||||||||||||||||| || ||  ||||||| |||||||||||
Sbjct: 1309697 tggtcctctccaattttagaggtagttgcttcgtgctcaacacg 1309740
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 623     tgtggatcatctttgtccctgtatcggcctgctggt 658
               ||||||||||||| || || ||||||||||||||||
Sbjct: 2001115 tgtggatcatcttggtgccggtatcggcctgctggt 2001080
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                  
Query: 623     tgtggatcatctttgtccctgtatcggcctgctgg 657
               ||||||||||||| || || |||||||||||||||
Sbjct: 1038533 tgtggatcatcttggtgccggtatcggcctgctgg 1038567
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>gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome 18, complete sequence
          Length = 195082

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 250   aggttcataagtgcatccacct 271
             ||||||||||||||||||||||
Sbjct: 95114 aggttcataagtgcatccacct 95093
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>gb|AF329697.1| Xanthomonas oryzae pv. oryzae insertion sequence IS1051-X and
            insertion sequence IS1389-X, complete sequence
          Length = 17229

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 623  tgtggatcatctttgtccctgtatcggcctgctg 656
            ||||||||||||| || || ||||||||||||||
Sbjct: 4582 tgtggatcatcttggtgccggtatcggcctgctg 4549
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 623     tgtggatcatctttgtccctgtatcggcctgctg 656
               ||||||||||||| || || ||||||||||||||
Sbjct: 1413528 tgtggatcatcttggtgccggtatcggcctgctg 1413561
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>gb|AE012389.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 297
            of 460 of the complete genome
          Length = 13391

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 623  tgtggatcatctttgtccctgtatcggcctgctg 656
            ||||||||||||| || || ||||||||||||||
Sbjct: 9428 tgtggatcatcttggtgccggtatcggcctgctg 9395
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 623     tgtggatcatctttgtccctgtatcggcctgctg 656
               ||||||||||||| || || ||||||||||||||
Sbjct: 1634164 tgtggatcatcttggtgccggtatcggcctgctg 1634197
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 623     tgtggatcatctttgtccctgtatcggcctgctg 656
               ||||||||||||| || || ||||||||||||||
Sbjct: 1439182 tgtggatcatcttggtgccggtatcggcctgctg 1439215
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>ref|NM_116715.3| Arabidopsis thaliana ATABC1 AT4G04770 (ATABC1) mRNA, complete cds
          Length = 1937

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 612  attcttccccttgtggatcatctttgtccctgtatcggcctgctg 656
            |||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 1352 attctttcctttgtgaatcatcttagtccctgtatcagcttgctg 1308
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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 401   atgtgcttgcttcatgctcaa 421
             |||||||||||||||||||||
Sbjct: 79552 atgtgcttgcttcatgctcaa 79572
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 36      gttctcttcgctgtcgtgggcaccg 60
               ||||||||||||| |||||||||||
Sbjct: 1945353 gttctcttcgctgccgtgggcaccg 1945329
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>ref|XM_756437.1| Ustilago maydis 521 hypothetical protein (UM05383.1) partial mRNA
          Length = 6060

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   cgctgtcgtgggcaccgtgac 64
            |||||||||||||||||||||
Sbjct: 4632 cgctgtcgtgggcaccgtgac 4612
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>ref|XM_567032.1| Cryptococcus neoformans var. neoformans JEC21 succinate-semialdehyde
            dehydrogenase [NAD(P)+] (CNA07130) partial mRNA
          Length = 1872

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 36   gttctcttcgctgtcgtgggcaccg 60
            ||||||||||||| |||||||||||
Sbjct: 1058 gttctcttcgctgccgtgggcaccg 1082
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>emb|AL161501.2|ATCHRIV13 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 13
          Length = 200001

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                           
Query: 612    attcttccccttgtggatcatctttgtccctgtatcggcctgctg 656
              |||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 155515 attctttcctttgtgaatcatcttagtccctgtatcagcttgctg 155559
to top
>gb|AY142069.1| Arabidopsis thaliana At4g04770/T4B21_16 mRNA, complete cds
          Length = 1674

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 612  attcttccccttgtggatcatctttgtccctgtatcggcctgctg 656
            |||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 1287 attctttcctttgtgaatcatcttagtccctgtatcagcttgctg 1243
to top
>emb|BX537928.1|HSM806046 Homo sapiens genomic DNA; cDNA DKFZp686C2092 (from clone
           DKFZp686C2092)
          Length = 4427

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 344 tttcatgatctatcccccttt 364
           |||||||||||||||||||||
Sbjct: 690 tttcatgatctatcccccttt 710
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>gb|AC092421.2| Homo sapiens chromosome 3 clone RP11-476A24, complete sequence
          Length = 160726

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 193   atgatatttcacatacttgtt 213
             |||||||||||||||||||||
Sbjct: 30150 atgatatttcacatacttgtt 30130
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>gb|AY056410.1| Arabidopsis thaliana AT4g04770/T4B21_16 mRNA, complete cds
          Length = 1842

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 612  attcttccccttgtggatcatctttgtccctgtatcggcctgctg 656
            |||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 1291 attctttcctttgtgaatcatcttagtccctgtatcagcttgctg 1247
to top
>gb|AY052195.1| Arabidopsis thaliana AT4g04770/T4B21_16 mRNA, complete cds
          Length = 1904

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 612  attcttccccttgtggatcatctttgtccctgtatcggcctgctg 656
            |||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 1354 attctttcctttgtgaatcatcttagtccctgtatcagcttgctg 1310
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 625     tggatcatctttgtccctgtatcggcctgctgg 657
               ||||||||||| || || |||||||||||||||
Sbjct: 2992619 tggatcatcttggtgccggtatcggcctgctgg 2992651
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>tpg|BK001497.1| TPA: TPA_exp: Arabidopsis thaliana putative ABC transporter 1 mRNA,
            complete cds; nuclear gene for plastid product
          Length = 1674

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 612  attcttccccttgtggatcatctttgtccctgtatcggcctgctg 656
            |||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 1287 attctttcctttgtgaatcatcttagtccctgtatcagcttgctg 1243
to top
>emb|BX827948.1|CNS0A3VL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH38ZA11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 678

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 612 attcttccccttgtggatcatctttgtccctgtatcggcctgctg 656
           |||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 95  attctttcctttgtgaatcatcttagtccctgtatcagcttgctg 51
to top
>emb|BX827675.1|CNS0A3OT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS9ZB06 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1812

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 612  attcttccccttgtggatcatctttgtccctgtatcggcctgctg 656
            |||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 1351 attctttcctttgtgaatcatcttagtccctgtatcagcttgctg 1307
to top
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 393    aattttggatgtgcttgcttcatgctcaa 421
              ||||||||||||  |||||||||||||||
Sbjct: 724261 aattttggatgttgttgcttcatgctcaa 724233
to top
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 628     atcatctttgtccctgtatcggcctgctg 656
               |||||||||||||| |||||||| |||||
Sbjct: 2992725 atcatctttgtcccggtatcggcttgctg 2992697
to top
>gb|AF118223.2|T4B21 Arabidopsis thaliana BAC T4B21
          Length = 91470

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 612   attcttccccttgtggatcatctttgtccctgtatcggcctgctg 656
             |||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 43837 attctttcctttgtgaatcatcttagtccctgtatcagcttgctg 43881
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 625     tggatcatctttgtccctgtatcggcctgctg 656
               ||||||||||| || || ||||||||||||||
Sbjct: 2150015 tggatcatcttggtgccggtatcggcctgctg 2150046
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 625     tggatcatctttgtccctgtatcggcctgctg 656
               ||||||||||| || || ||||||||||||||
Sbjct: 2172096 tggatcatcttggtgccggtatcggcctgctg 2172127
to top
>gb|BC070011.1| Danio rerio zgc:73404, mRNA (cDNA clone MGC:85750 IMAGE:6525879),
           complete cds
          Length = 1768

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 ttattcttctcagtctcata 123
           ||||||||||||||||||||
Sbjct: 251 ttattcttctcagtctcata 232
to top
>gb|AC182692.2| Populus trichocarpa clone Pop1-44B2, complete sequence
          Length = 105327

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 395   ttttggatgtgcttgcttcatgct 418
             ||||||||||||||| ||||||||
Sbjct: 16284 ttttggatgtgcttgtttcatgct 16261
to top
>gb|AC145516.4| Mus musculus BAC clone RP24-157K17 from chromosome Y, complete sequence
          Length = 202847

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tctcatactgctgctgtaca 136
             ||||||||||||||||||||
Sbjct: 30556 tctcatactgctgctgtaca 30575
to top
>gb|AC123928.3| Mus musculus BAC clone RP24-390L8 from chromosome Y, complete sequence
          Length = 154303

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    tctcatactgctgctgtaca 136
              ||||||||||||||||||||
Sbjct: 128688 tctcatactgctgctgtaca 128707
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>gb|AC145607.3| Mus musculus BAC clone RP24-270N6 from chromosome Y, complete sequence
          Length = 195706

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    tctcatactgctgctgtaca 136
              ||||||||||||||||||||
Sbjct: 150264 tctcatactgctgctgtaca 150245
to top
>gb|AY376457.1| Meriones unguiculatus follicle stimulating hormone beta subunit
            (FSH-beta) mRNA, complete cds
          Length = 1640

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    atggacagacaaaagagaag 28
            ||||||||||||||||||||
Sbjct: 1472 atggacagacaaaagagaag 1453
to top
>gb|AC144627.2| Mus musculus BAC clone RP24-164A21 from chromosome Y, complete sequence
          Length = 135780

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tctcatactgctgctgtaca 136
             ||||||||||||||||||||
Sbjct: 40237 tctcatactgctgctgtaca 40256
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>gb|AC145563.2| Mus musculus BAC clone RP24-75L3 from chromosome Y, complete sequence
          Length = 204641

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tctcatactgctgctgtaca 136
             ||||||||||||||||||||
Sbjct: 81915 tctcatactgctgctgtaca 81934
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>gb|AC145566.4| Mus musculus BAC clone RP24-79A15 from chromosome Y, complete sequence
          Length = 163909

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tctcatactgctgctgtaca 136
             ||||||||||||||||||||
Sbjct: 44515 tctcatactgctgctgtaca 44534
to top
>gb|AC144857.3| Mus musculus BAC clone RP24-168C21 from chromosome Y, complete sequence
          Length = 156433

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    tctcatactgctgctgtaca 136
              ||||||||||||||||||||
Sbjct: 112531 tctcatactgctgctgtaca 112512
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>gb|AC132295.4| Mus musculus BAC clone RP24-325L5 from chromosome Y, complete sequence
          Length = 179299

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tctcatactgctgctgtaca 136
             ||||||||||||||||||||
Sbjct: 52661 tctcatactgctgctgtaca 52680
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>emb|BX928750.9| Zebrafish DNA sequence from clone DKEY-162P13 in linkage group 6,
              complete sequence
          Length = 178487

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    ttattcttctcagtctcata 123
              ||||||||||||||||||||
Sbjct: 134002 ttattcttctcagtctcata 133983
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>gb|AC016827.7|ATAC016827 Arabidopsis thaliana chromosome III BAC F17A9 genomic sequence,
             complete sequence
          Length = 90142

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     aaaaatggacagacaaaagagaag 28
             ||||||||||||||| ||||||||
Sbjct: 61121 aaaaatggacagacagaagagaag 61098
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>gb|AC127678.9| Mus musculus BAC clone RP24-233M12 from chromosome 18, complete sequence
          Length = 157430

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 103    tttattcttctcagtctcatactg 126
              ||||||||||||||||||| ||||
Sbjct: 105921 tttattcttctcagtctcagactg 105898
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>gb|DQ277922.1| Mus musculus clone Bgal-Synd+.08b immunoglobulin lambda1 light
           chain variable region gene, partial cds
          Length = 279

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 469 gcagccttgtccccaatcag 488
           ||||||||||||||||||||
Sbjct: 212 gcagccttgtccccaatcag 193
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 624     gtggatcatctttgtccctgtatcggcctgctggta 659
               |||||||||||| || || || ||||||||||||||
Sbjct: 4501679 gtggatcatcttggtgccggtgtcggcctgctggta 4501644
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>emb|AL121837.33|HSJ988J12 Human DNA sequence from clone RP5-988J12 on chromosome 6q16.1-16.3
             Contains the 5' end of the MAP3K7 gene for
             mitogen-activated protein kinase kinase kinase 7 (TGF-beta
             activated kinase 1, TAK1) and two CpG islands, complete
             sequence
          Length = 86398

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    atcatgtaatttattcttct 113
             ||||||||||||||||||||
Sbjct: 51924 atcatgtaatttattcttct 51943
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>emb|BX323565.10| Zebrafish DNA sequence from clone DKEYP-95B12 in linkage group 16,
             complete sequence
          Length = 87826

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    agagaagcgccacggttctc 41
             ||||||||||||||||||||
Sbjct: 51995 agagaagcgccacggttctc 52014
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 628     atcatctttgtccctgtatcggcctgctggta 659
               |||||||| || || |||||||||||||||||
Sbjct: 1473513 atcatcttggtgccggtatcggcctgctggta 1473544
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 628     atcatctttgtccctgtatcggcctgctggta 659
               |||||||| || || |||||||||||||||||
Sbjct: 2210698 atcatcttggtgccggtatcggcctgctggta 2210667
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>gb|AC175526.4| Mus musculus BAC clone RP24-84E22 from chromosome y, complete sequence
          Length = 206636

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    tctcatactgctgctgtaca 136
              ||||||||||||||||||||
Sbjct: 122945 tctcatactgctgctgtaca 122964
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 622    ttgtggatcatctttgtccctgtatcggcctg 653
              |||||||||||||| || || |||||||||||
Sbjct: 202870 ttgtggatcatcttggtgccggtatcggcctg 202839
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>gb|AC175668.3| Mus musculus BAC clone RP24-319G11 from chromosome y, complete sequence
          Length = 160204

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    tctcatactgctgctgtaca 136
              ||||||||||||||||||||
Sbjct: 101275 tctcatactgctgctgtaca 101294
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>gb|AC134557.4| Mus musculus chromosome UNK clone RP24-323H18, complete sequence
          Length = 170283

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    tctcatactgctgctgtaca 136
              ||||||||||||||||||||
Sbjct: 115598 tctcatactgctgctgtaca 115617
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>gb|AC142129.4| Rattus norvegicus  BAC CH230-183M21 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 215272

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    atactgctgctgtacacatg 140
              ||||||||||||||||||||
Sbjct: 161462 atactgctgctgtacacatg 161443
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 625    tggatcatctttgtccctgtatcggcctgctg 656
              ||||||||||| || || ||||||||||||||
Sbjct: 115959 tggatcatcttcgtgcccgtatcggcctgctg 115990
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>emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, complete sequence
          Length = 231581

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    ttattcttctcagtctcata 123
              ||||||||||||||||||||
Sbjct: 178967 ttattcttctcagtctcata 178948


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,820,214
Number of Sequences: 3902068
Number of extensions: 5820214
Number of successful extensions: 110097
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109645
Number of HSP's gapped (non-prelim): 447
length of query: 676
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 653
effective length of database: 17,143,297,704
effective search space: 11194573400712
effective search space used: 11194573400712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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