Clone Name | rbasd18g20 |
---|---|
Clone Library Name | barley_pub |
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 1156 bits (583), Expect = 0.0 Identities = 621/633 (98%), Gaps = 1/633 (0%) Strand = Plus / Minus Query: 1 tttatattaacccnagggtataaatagattn-tcgtggtgactcttattggaacgaggga 59 |||||||||| || |||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 638 tttatattaagccaagggtataaatagattcatcgtgggttctcttattggaacgaggga 579 Query: 60 aaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggtatcaaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 aaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggtatcaaga 519 Query: 120 ttgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatg 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 ttgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatg 459 Query: 180 attaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgc 239 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 458 attaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttgc 399 Query: 240 tgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcac 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 tgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcac 339 Query: 300 agacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcag 359 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 agacggaagtccggcatccaattgtgcagtactcagtcgcatttggttcaccggattcag 279 Query: 360 ggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 ggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaac 219 Query: 420 cacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagt 479 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 218 cacaagcagttgcgcagactggtcgggaaccaccagcgaaacggcaggcgttgtagcagt 159 Query: 480 ttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaacta 539 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 158 ttctgcccgtcgtgttcttgcagcaactcttggcttctacttggacctgctccagaacta 99 Query: 540 aacccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccatggttg 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98 aacccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccatggttg 39 Query: 600 gctagttggccttaatttctcaagtagaatgag 632 ||| ||||||||||||||||||||||||||||| Sbjct: 38 gctggttggccttaatttctcaagtagaatgag 6
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 1134 bits (572), Expect = 0.0 Identities = 587/592 (99%) Strand = Plus / Minus Query: 41 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538 Query: 101 tctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaa 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 tctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaa 478 Query: 161 tcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcattacag 220 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 477 tcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacag 418 Query: 221 aaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaa 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 aaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaa 358 Query: 281 acattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgca 340 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 357 acattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgca 298 Query: 341 tttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttggg 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 tttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttggg 238 Query: 401 ccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaa 460 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 237 ccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaa 178 Query: 461 cggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctact 520 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 177 cggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctact 118 Query: 521 tggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactc 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117 tggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactc 58 Query: 581 ttgttggttgccatggttggctagttggccttaatttctcaagtagaatgag 632 |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 57 ttgttggttgccatggttggctggttggccttaatttctcaagtagaatgag 6
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 1021 bits (515), Expect = 0.0 Identities = 530/535 (99%) Strand = Plus / Minus Query: 98 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 481 Query: 158 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcatta 217 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 480 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcatta 421 Query: 218 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgg 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgg 361 Query: 278 gaaacattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtc 337 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 360 gaaacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtc 301 Query: 338 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgtt 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgtt 241 Query: 398 gggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 240 gggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcg 181 Query: 458 aaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttct 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 180 aaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttct 121 Query: 518 acttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaata 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 acttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaata 61 Query: 578 ctcttgttggttgccatggttggctagttggccttaatttctcaagtagaatgag 632 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 60 ctcttgttggttgccatggttggctggttggccttaatttctcaagtagaatgag 6
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 1017 bits (513), Expect = 0.0 Identities = 528/533 (99%) Strand = Plus / Minus Query: 32 tcgtggtgactcttattggaacgagggaaaaaacagaaatacataactaagatgatacat 91 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 tcgtggcgactcttattggaacgagggaaaaaacagaaatacataactaagatgatacat 474 Query: 92 ttgcttcgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttgg 151 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 ttgcttcgatgtggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttgg 414 Query: 152 ccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcacca 211 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 413 ccatagaaatcatgcccaagaaggcatgattaggcttcaagagactgaatgacttcacca 354 Query: 212 tcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttgg 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 353 tcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttgg 294 Query: 272 ccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtac 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 293 ccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtac 234 Query: 332 tcagtcgcatttggttcaccggattcagggagaagattcagcttaggatagtccctagga 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 tcagtcgcatttggttcaccggattcagggagaagattcagcttaggatagtccctagga 174 Query: 392 catgttgggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaacca 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 173 catgttgggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaacca 114 Query: 452 ccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttg 511 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 ccagcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttg 54 Query: 512 ccttctacttggacctgctccagaactaaacccaatatgagaacacaaataac 564 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53 ccttctacttggacctgctccagaactaaacccaatatgagaacacaaataac 1
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 874 bits (441), Expect = 0.0 Identities = 470/479 (98%), Gaps = 1/479 (0%) Strand = Plus / Minus Query: 1 tttatattaacccnagggtataaatagattn-tcgtggtgactcttattggaacgaggga 59 |||||||||| || |||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 479 tttatattaagccaagggcataaatagattcatcgtggtgactcttattggaacgaggga 420 Query: 60 aaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggtatcaaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 aaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggtatcaaga 360 Query: 120 ttgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatg 179 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 ttgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgcccaagaaggcatg 300 Query: 180 attaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgc 239 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 299 attaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttgc 240 Query: 240 tgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcac 299 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 239 tgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccaggttgtcac 180 Query: 300 agacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcag 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 agacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcag 120 Query: 360 ggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaac 419 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 119 ggagaagattcagcttaggatagtccctaggacaggttgggccgcttatgattttacaac 60 Query: 420 cacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcag 478 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59 cacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcag 1
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 813 bits (410), Expect = 0.0 Identities = 413/414 (99%) Strand = Plus / Minus Query: 181 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355 Query: 241 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295 Query: 301 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235 Query: 361 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175 Query: 421 acaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagtt 480 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115 Query: 481 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 55 Query: 541 acccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccat 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54 acccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccat 1
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 692 bits (349), Expect = 0.0 Identities = 554/619 (89%), Gaps = 3/619 (0%) Strand = Plus / Minus Query: 1 tttatattaacccnagggtataaatagattn-tcgtggtgactcttattggaacgaggga 59 |||||||||| || |||||| ||||||||| |||||| ||| ||||||||||| ||||| Sbjct: 620 tttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaaggga 561 Query: 60 aaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaag 118 |||| ||||||| ||||| ||||||||||||||| ||||||| | | ||||||||||||| Sbjct: 560 aaaa-cagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaag 502 Query: 119 attgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcat 178 ||| || || | |||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 501 attattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcat 442 Query: 179 gattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttg 238 |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 441 gattaggcttcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcgttg 382 Query: 239 ctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtca 298 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 381 ctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtca 322 Query: 299 cagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattca 358 ||||| ||| ||||||||||||| |||||||||| ||| ||| |||||||||||||||| Sbjct: 321 cagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattca 262 Query: 359 gggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaa 418 ||||||||||| || ||||||||||| ||||| ||| |||| || ||||||||||||||| Sbjct: 261 gggagaagattaagtttaggatagtcactagggcattttggaccacttatgattttacaa 202 Query: 419 ccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcag 478 | ||||||| |||||||||||| ||||||||||| ||||||||||| | |||||||||| Sbjct: 201 cgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgttgtagcag 142 Query: 479 tttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaact 538 ||||| | ||||| |||||||||||| || || || || |||||||||||||||||| Sbjct: 141 tttctagctaacgtgtccttgcagcaactttttccctccacctggacctgctccagaact 82 Query: 539 aaacccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccatggtt 598 ||||||| ||||||||||||||| ||||| ||||||||||||||| ||| |||||||||| Sbjct: 81 aaacccagtatgagaacacaaatgaccacactcttaatactcttgctgggtgccatggtt 22 Query: 599 ggctagttggccttaattt 617 |||| ||||| ||||||| Sbjct: 21 ggcttcttggctttaattt 3
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 670 bits (338), Expect = 0.0 Identities = 540/604 (89%), Gaps = 3/604 (0%) Strand = Plus / Minus Query: 1 tttatattaacccnagggtataaatagattn-tcgtggtgactcttattggaacgaggga 59 |||||||||| || |||||| ||||||||| |||||| ||||||||||||||| ||||| Sbjct: 613 tttatattaagccaagggtacaaatagattcatcgtggcgactcttattggaacaaggga 554 Query: 60 aaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaag 118 |||| | |||||||||| |||||||||||||| ||||| || | | ||||||||||||| Sbjct: 553 aaaag-acaaatacataagtaagatgatacattggcttccatacagctgatggtatcaag 495 Query: 119 attgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcat 178 ||| || || | |||||||||| |||||| |||||||||||||||||| ||||||||||| Sbjct: 494 attattcaagacaaaatgacaatacgaccatggccatagaaatcatgcacaagaaggcat 435 Query: 179 gattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttg 238 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 434 gattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttg 375 Query: 239 ctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtca 298 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 374 ctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtca 315 Query: 299 cagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattca 358 ||||| ||| ||||||||||||| |||||||||| || ||| |||||||||||||||| Sbjct: 314 cagacagaattcctgcatccaatggtgcagtactgcgtgacatctggttcaccggattca 255 Query: 359 gggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaa 418 |||||||||||||| ||||||||||| ||||| ||| |||| || ||||||||||||||| Sbjct: 254 gggagaagattcagtttaggatagtcactagggcattttggaccacttatgattttacaa 195 Query: 419 ccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcag 478 | ||||||| |||||||||||| ||||||||||| |||||| |||| | |||||||||| Sbjct: 194 cgacaagcacctgcgcagactggacgggaaccacccgcgaaatggcaagtgttgtagcag 135 Query: 479 tttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaact 538 ||||| | ||||| |||||||||||| || || || || |||||||||||||||||| Sbjct: 134 tttctagctaacgtgtccttgcagcaactttttccctccacctggacctgctccagaact 75 Query: 539 aaacccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccatggtt 598 ||||||| ||||||||||||||| ||||| ||||||||||||||| ||| |||||||||| Sbjct: 74 aaacccagtatgagaacacaaatgaccacactcttaatactcttgctgggtgccatggtt 15 Query: 599 ggct 602 |||| Sbjct: 14 ggct 11
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 539 bits (272), Expect = e-150 Identities = 281/284 (98%) Strand = Plus / Minus Query: 349 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 408 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738 Query: 409 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678 Query: 469 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 1618 Query: 529 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1617 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 1558 Query: 589 tgccatggttggctagttggccttaatttctcaagtagaatgag 632 |||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 1557 tgccatggttggctggttggccttaatttctcatgtagaatgag 1514 Score = 349 bits (176), Expect = 7e-93 Identities = 182/184 (98%) Strand = Plus / Minus Query: 99 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2237 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 2178 Query: 159 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcattac 218 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2177 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 2118 Query: 219 agaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggg 278 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2117 agaaacgggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacggg 2058 Query: 279 aaac 282 |||| Sbjct: 2057 aaac 2054 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 282 cattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcat 341 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904 Query: 342 ttggttcacc 351 |||||||||| Sbjct: 1903 ttggttcacc 1894
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 498 bits (251), Expect = e-137 Identities = 396/441 (89%), Gaps = 3/441 (0%) Strand = Plus / Minus Query: 1 tttatattaacccnagggtataaatagattn-tcgtggtgactcttattggaacgaggga 59 |||||||||| || |||||| ||||||||| |||||| ||| ||||||||||| ||||| Sbjct: 440 tttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaaggga 381 Query: 60 aaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaag 118 |||| ||||||| ||||| ||||||||||||||| ||||||| | | ||||||||||||| Sbjct: 380 aaaa-cagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaag 322 Query: 119 attgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcat 178 ||| || || | |||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 321 attattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcat 262 Query: 179 gattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttg 238 ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 261 gattaggattcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcgttg 202 Query: 239 ctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtca 298 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 201 ctgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtccatgttgtca 142 Query: 299 cagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattca 358 ||||| ||| ||||||||||||| |||||||||| ||| ||| ||||||||||||||| Sbjct: 141 cagacagaattcctgcatccaatggtgcagtactgagtgacatcgggttcaccggattca 82 Query: 359 gggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaa 418 ||||||||||| || ||||||||||| ||||| ||| |||| || ||||||||||||||| Sbjct: 81 gggagaagattaagtttaggatagtcactagggcattttggaccacttatgattttacaa 22 Query: 419 ccacaagcagttgcgcagact 439 | ||||||| |||||||||| Sbjct: 21 cgacaagcacctgcgcagact 1
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 337 bits (170), Expect = 3e-89 Identities = 258/284 (90%), Gaps = 3/284 (1%) Strand = Plus / Minus Query: 1 tttatattaacccnagggtataaatagattn-tcgtggtgactcttattggaacgaggga 59 |||||||||| || |||||| ||||||||| |||||| ||||||| ||||||| ||||| Sbjct: 2313 tttatattaagccaagggtacaaatagattcatcgtggcgactcttgttggaacaaggga 2254 Query: 60 aaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaag 118 |||| | |||||||||| |||||||||||||| ||||| || | | ||||||||||||| Sbjct: 2253 aaaag-acaaatacataagtaagatgatacattggcttccatacagctgatggtatcaag 2195 Query: 119 attgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcat 178 ||| || || | |||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 2194 attattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcat 2135 Query: 179 gattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttg 238 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2134 gattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttg 2075 Query: 239 ctgcagagtcccatgtcgaatttcatctcttggccacgggaaac 282 ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2074 ctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 2031 Score = 285 bits (144), Expect = 9e-74 Identities = 249/284 (87%) Strand = Plus / Minus Query: 349 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 408 |||||||||||||||||||||||| ||||||||||| ||||| ||| |||| || ||||| Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717 Query: 409 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 468 ||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657 Query: 469 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 528 ||||||||||||||| | ||||| |||||||||||| || || || || |||||||| Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 1597 Query: 529 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 588 ||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||| ||| Sbjct: 1596 ctccagaactaaaaccagtatgagaacacaaatgaccacactcttaatactcttgctggg 1537 Query: 589 tgccatggttggctagttggccttaatttctcaagtagaatgag 632 |||||||||||||| ||||| |||||||||| || |||||||| Sbjct: 1536 tgccatggttggcttcttggctttaatttctccagaagaatgag 1493 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 282 cattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcat 341 |||||||||||||||||||||| ||| || |||||||||| |||||||||| ||| ||| Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878 Query: 342 ttggttcacc 351 ||||||||| Sbjct: 1877 ctggttcacc 1868
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 206 bits (104), Expect = 6e-50 Identities = 377/466 (80%), Gaps = 4/466 (0%) Strand = Plus / Minus Query: 144 gaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatga 203 ||||| ||||| ||||||||||| ||||| ||||||||| |||| | ||| |||||| Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437 Query: 204 catcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 263 | |||| | ||||||||||| ||||| | ||| |||||||| |||||||| ||||| Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377 Query: 264 tctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaattg 323 ||||||||||| | ||||||||||||||||||||| ||||||||| ||||||| || | Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317 Query: 324 tgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggatagt 383 ||||||||||||| ||| ||||||||||||||| | ||||||| ||| |||| |||| Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatagc 257 Query: 384 ccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagactggtc 443 | |||||||||| ||| || ||||||||| |||||| || ||||||| ||| | Sbjct: 256 catcaggacatgtt---ccgtctacgattttacatccacaaagagatgcgcagcgtggcc 200 Query: 444 gggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagc 503 ||||| ||||| ||||||||| |||| ||||||||||| | | ||| || ||||| Sbjct: 199 gggaagtaccggttaaacggcagacgttatagcagtttcttgcagatgtgctcgggcagc 140 Query: 504 aactcttgccttctacttggacctgctccagaactaaacccaatatgagaacacaaataa 563 ||||||| || ||||| ||||||||| ||||||||||||| | || ||| ||||||| | Sbjct: 139 aactctttccctctacctggacctgccccagaactaaacctagtacgaggacacaaagca 80 Query: 564 ccacgctcttaatactcttgttggttgccatggttggctagttggc 609 |||| | ||||| || ||| |||||||||||| |||||||||||| Sbjct: 79 ccacacacttaagacctttggtggttgccatgg-tggctagttggc 35
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 184 bits (93), Expect = 2e-43 Identities = 258/313 (82%) Strand = Plus / Minus Query: 290 atgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttca 349 ||||||||||| ||||||||| |||||||||| ||||||||||||| |||| || |||| Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327 Query: 350 ccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatg 409 ||| |||||| |||||||| | | ||||| | || || ||||| |||| || || | Sbjct: 326 ccgtattcagagagaagatgctgtttaggccaatcacttggacaagttgtaacgtctaag 267 Query: 410 attttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcg 469 | |||||||||||| | | |||||||||||| || | | |||| || ||||||||| | Sbjct: 266 agtttacaaccacatggacctgcgcagactgggcgcggagcaccagctaaacggcagaca 207 Query: 470 ttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgc 529 |||||||||||| | |||||||| ||||||||||||||||||| ||||| ||||||||| Sbjct: 206 ttgtagcagtttattgccgtcgtgctcttgcagcaactcttgccctctacctggacctgc 147 Query: 530 tccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggtt 589 |||||||||||||||| ||||| | ||||||||| | ||||| |||| |||| | || Sbjct: 146 tccagaactaaacccagcatgaggaaacaaataacagcactcttgatacccttgcttgtg 87 Query: 590 gccatggttggct 602 ||||||||||||| Sbjct: 86 gccatggttggct 74 Score = 79.8 bits (40), Expect = 1e-11 Identities = 118/144 (81%) Strand = Plus / Minus Query: 133 aatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaac 192 |||| |||||||||| ||||||||||||| | || | ||| |||||||||||| | || Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499 Query: 193 agactgaatgacatcaccatcattacagaaacgggcacatgcgttgctgcagagtcccat 252 ||| || |||| |||| | |||||||||||| ||||||||||| |||||| | ||| Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcat 439 Query: 253 gtcgaatttcatctcttggccacg 276 ||||| ||||||||||||||||| Sbjct: 438 gtcgatgttcatctcttggccacg 415
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 113 bits (57), Expect = 7e-22 Identities = 114/133 (85%) Strand = Plus / Minus Query: 468 cgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacct 527 |||||||||||||||| |||| |||| ||||||||||||||| || ||||||||||| | Sbjct: 149 cgttgtagcagtttcttgccgtggtgtccttgcagcaactctttccctctacttggacat 90 Query: 528 gctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttgg 587 |||||||||||| ||||||| ||||||||||| ||||| ||||||| || |||| | Sbjct: 89 gctccagaactatccccaatacaagaacacaaatgaccacactcttaagacccttgatac 30 Query: 588 ttgccatggttgg 600 || |||||||||| Sbjct: 29 ttcccatggttgg 17
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 469 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 528 ||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 73 Query: 529 ctccagaactaaacccaatatgag 552 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin Length = 641 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 469 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 528 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 189 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 130 Query: 529 ctccagaactaaacccaatatgag 552 |||||||| || |||| |||||| Sbjct: 129 ttccagaaccaaccccagtatgag 106
>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene Length = 901 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 469 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 528 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 73 Query: 529 ctccagaactaaacccaatatgag 552 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 469 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 528 ||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| Sbjct: 140 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 81 Query: 529 ctccagaactaaacccaatatgag 552 |||||||| || |||| |||||| Sbjct: 80 ttccagaaccaaccccagtatgag 57
>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds Length = 915 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 469 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 528 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 177 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 118 Query: 529 ctccagaactaaacccaatatgag 552 |||||||| || |||| |||||| Sbjct: 117 ttccagaaccaaccccagtatgag 94
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 496 cttgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaac 555 ||||||||||||||| || ||||||||||||||||||||||||| ||||||| || || Sbjct: 122 cttgcagcaactctttccctctacttggacctgctccagaactatccccaatacaaggac 63 Query: 556 acaaataaccacgctcttaa 575 |||||| || || ||||||| Sbjct: 62 acaaatgactacactcttaa 43
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 469 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 528 ||||||||||||||| || ||| |||||||||||||||| ||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactctttccttctacttgcacctg 73 Query: 529 ctccagaactaaacccaatatgag 552 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin Length = 535 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 498 tgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgag 552 ||||||||||||||||||||||||| || || |||||||| || |||| |||||| Sbjct: 127 tgcagcaactcttgccttctacttgcacatgttccagaaccaaccccagtatgag 73
>emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin Length = 569 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 469 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 528 ||||||||||||||| || ||| || ||||||||||||||||||||||||| ||||| Sbjct: 107 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctacttgcacctg 48 Query: 529 ctccagaac 537 || ||||| Sbjct: 47 ttcgagaac 39
>gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) gene, complete cds Length = 1805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 469 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 528 ||||||||||||||| || ||| || ||||||||||||||||||||||||| ||||| Sbjct: 485 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctacttgcacctg 426 Query: 529 ctccagaac 537 || ||||| Sbjct: 425 ttcgagaac 417
>emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese Spring Length = 888 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 469 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 528 ||||||||||||||| ||| ||| || ||||||| |||||||||||||| || | ||| Sbjct: 132 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacctgcagctg 73 Query: 529 ctccagaactaaacccaatatgag 552 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin Length = 567 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 469 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 528 ||||||||||||||| ||| ||| || ||||||| |||||||||||||| || | ||| Sbjct: 91 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacctgcagctg 32 Query: 529 ctccagaactaaacccaatatgag 552 |||||||| || |||| |||||| Sbjct: 31 ttccagaaccaaccccagtatgag 8
>gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete sequence Length = 58609 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 aaaaaacagaaatacataact 79 ||||||||||||||||||||| Sbjct: 8230 aaaaaacagaaatacataact 8210
>emb|BX248402.13| Zebrafish DNA sequence from clone CH211-226P14 in linkage group 14, complete sequence Length = 137130 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 atgacatcaccatcattacagaaac 224 |||||||||||||||||||| |||| Sbjct: 27486 atgacatcaccatcattacataaac 27462
>emb|BX004990.12| Zebrafish DNA sequence from clone DKEY-12H12, complete sequence Length = 201461 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 atgacatcaccatcattacagaaac 224 |||||||||||||||||||| |||| Sbjct: 188699 atgacatcaccatcattacataaac 188723
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 caagattgttgaacagaaaat 135 ||||||||||||||||||||| Sbjct: 6740764 caagattgttgaacagaaaat 6740784
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 caagattgttgaacagaaaat 135 ||||||||||||||||||||| Sbjct: 61817 caagattgttgaacagaaaat 61837
>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15 Length = 1523 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 cgtgttcttgcagcaactct 509 |||||||||||||||||||| Sbjct: 947 cgtgttcttgcagcaactct 966
>gb|AC101677.8| Mus musculus chromosome 10, clone RP23-138N1, complete sequence Length = 206087 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 atgacatcaccatcattaca 219 |||||||||||||||||||| Sbjct: 32100 atgacatcaccatcattaca 32119
>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence Length = 173428 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 cgtgttcttgcagcaactct 509 |||||||||||||||||||| Sbjct: 54209 cgtgttcttgcagcaactct 54190
>emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on chromosome 13, complete sequence Length = 159981 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 ttaatactcttgttggttgc 591 |||||||||||||||||||| Sbjct: 131995 ttaatactcttgttggttgc 131976
>emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4, COMPLETE SEQUENCE Length = 114414 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aaatacataactaagatgat 87 |||||||||||||||||||| Sbjct: 70952 aaatacataactaagatgat 70971
>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence Length = 109548 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aaatacataactaagatgat 87 |||||||||||||||||||| Sbjct: 645 aaatacataactaagatgat 664
>gb|AC022395.4| Homo sapiens chromosome 10 clone RP11-354M20, complete sequence Length = 193669 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 aactaagatgatacatttgc 95 |||||||||||||||||||| Sbjct: 96493 aactaagatgatacatttgc 96512
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence Length = 175838 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 aacccaatatgagaacacaa 559 |||||||||||||||||||| Sbjct: 112938 aacccaatatgagaacacaa 112957
>gb|AC026188.6| Homo sapiens chromosome 3 clone RP11-319I18 map 3p, complete sequence Length = 177721 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 aagattgttgaacagaaaat 135 |||||||||||||||||||| Sbjct: 113658 aagattgttgaacagaaaat 113677
>gb|AC097482.2| Homo sapiens BAC clone RP11-131L11 from 4, complete sequence Length = 160763 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 taatttctcaagtagaatga 631 |||||||||||||||||||| Sbjct: 11306 taatttctcaagtagaatga 11325
>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206425 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 atgacatcaccatcattaca 219 |||||||||||||||||||| Sbjct: 52069 atgacatcaccatcattaca 52050
>gb|AC133435.2| Homo sapiens 3 BAC RP11-343B5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 116556 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cagactgaatgacatcacca 211 |||||||||||||||||||| Sbjct: 64821 cagactgaatgacatcacca 64802
>gb|AC084654.1|CBRG45O23 Caenorhabditis briggsae cosmid G45O23, complete sequence Length = 34686 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 acagaaatacataactaaga 83 |||||||||||||||||||| Sbjct: 19747 acagaaatacataactaaga 19766
>gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small heat shock protein (vis1) gene, complete cds Length = 2257 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 actcttattggaacgagggaaaaa 63 |||||||||||||||| ||||||| Sbjct: 1736 actcttattggaacgaaggaaaaa 1713
>gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small heat shock protein (vis1) gene, complete cds Length = 2224 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 actcttattggaacgagggaaaaa 63 |||||||||||||||| ||||||| Sbjct: 1703 actcttattggaacgaaggaaaaa 1680
>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence Length = 172551 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 aacccaatatgagaacacaa 559 |||||||||||||||||||| Sbjct: 31644 aacccaatatgagaacacaa 31663
>gb|AC008498.3|AC008498 Homo sapiens chromosome 5 clone CTC-436P18, complete sequence Length = 217898 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 aaaaaacagaaatacataac 78 |||||||||||||||||||| Sbjct: 161134 aaaaaacagaaatacataac 161153
>gb|AC155325.5| Mus musculus 10 BAC RP24-86C24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171402 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 atgacatcaccatcattaca 219 |||||||||||||||||||| Sbjct: 34723 atgacatcaccatcattaca 34704
>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence Length = 190982 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 aactaagatgatacatttgc 95 |||||||||||||||||||| Sbjct: 32396 aactaagatgatacatttgc 32377
>gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complete sequence Length = 227073 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 aaaaaacagaaatacataac 78 |||||||||||||||||||| Sbjct: 101064 aaaaaacagaaatacataac 101083
>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete cds Length = 1047 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 ccttggccatagaaatcatgccca 169 |||||||||| ||||||||||||| Sbjct: 862 ccttggccattgaaatcatgccca 839
>emb|AL591882.12| Mouse DNA sequence from clone RP23-53L16 on chromosome 2, complete sequence Length = 251814 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 atttctcaagtagaatgagc 633 |||||||||||||||||||| Sbjct: 20803 atttctcaagtagaatgagc 20822
>gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3p, complete sequence Length = 179814 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 aagattgttgaacagaaaat 135 |||||||||||||||||||| Sbjct: 3697 aagattgttgaacagaaaat 3716 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,262,153 Number of Sequences: 3902068 Number of extensions: 5262153 Number of successful extensions: 98516 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98370 Number of HSP's gapped (non-prelim): 128 length of query: 633 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 610 effective length of database: 17,143,297,704 effective search space: 10457411599440 effective search space used: 10457411599440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)