Clone Name | rbasd18g06 |
---|---|
Clone Library Name | barley_pub |
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 94.7 bits (234), Expect = 2e-19 Identities = 52/152 (34%), Positives = 72/152 (47%), Gaps = 9/152 (5%) Frame = -3 Query: 646 GAMYIVIPGVLPVGCFPIYLTLYQTSNAGDYDQYGCLKRFNALSSRHNSLLQSKVTSLQS 467 G Y I P+GC + + + A D+D +GC+ N L+ + N L+ V L+S Sbjct: 210 GGRYFWIHNTGPIGCLAYVIERFP-NKASDFDSHGCVSPLNHLAQQFNHALKQAVIELRS 268 Query: 466 KYPYAKIMYADFYSHVFDMVKSPASYGFSTNLRACCGAGGGKYNYQNGARCGMSG----- 302 A I Y D YS ++ +GF +L +CCG GGKYNY G CGM Sbjct: 269 SLSEAAITYVDVYSLKHELFVHAQGHGFKGSLVSCCG-HGGKYNYNKGIGCGMKKIVKGK 327 Query: 301 ----ASACGNPSSSLSWDGIHLTEAAYKKIAD 218 C P ++ WDG+H T+AA K I D Sbjct: 328 EVYIGKPCDEPDKAVVWDGVHFTQAANKFIFD 359
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 87.8 bits (216), Expect = 3e-17 Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 9/165 (5%) Frame = -3 Query: 649 LGAMYIVIPGVLPVGCFPIYLTLYQTSNAGDYDQYGCLKRFNALSSRHNSLLQSKVTSLQ 470 LGA I P+GC LT + + + D GC K +N ++ N L+ V L+ Sbjct: 213 LGARTFWIHNTGPIGCLSFILTYFPWA---EKDSAGCAKAYNEVAQHFNHKLKEIVAQLR 269 Query: 469 SKYPYAKIMYADFYSHVFDMVKSPASYGFSTNLRACCGAGGGKYNYQNGARCGMSGAS-- 296 P A ++ D YS + + P +GF L CCG GGKYN+ A CG + + Sbjct: 270 KDLPLATFVHVDIYSVKYSLFSEPEKHGFEFPLITCCGY-GGKYNFSVTAPCGDTVTADD 328 Query: 295 -------ACGNPSSSLSWDGIHLTEAAYKKIADGWVNGPYCHPAI 182 +C PS ++WDG H TEAA + D G + P + Sbjct: 329 GTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQISTGAFSDPPV 373
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 73.6 bits (179), Expect = 5e-13 Identities = 46/141 (32%), Positives = 63/141 (44%) Frame = -3 Query: 646 GAMYIVIPGVLPVGCFPIYLTLYQTSNAGDYDQYGCLKRFNALSSRHNSLLQSKVTSLQS 467 GA I + G P+GC P + C + N S NS L + L Sbjct: 393 GARRIGVIGTPPLGCVPSQRLKKKKI---------CNEELNYASQLFNSKLLLILGQLSK 443 Query: 466 KYPYAKIMYADFYSHVFDMVKSPASYGFSTNLRACCGAGGGKYNYQNGARCGMSGASACG 287 P + +Y D Y+ + M+++PA+YGF + CC G GA C S + C Sbjct: 444 TLPNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTG----LLSAGALCKKSTSKICP 499 Query: 286 NPSSSLSWDGIHLTEAAYKKI 224 N SS L WDG+H T+ AYK I Sbjct: 500 NTSSYLFWDGVHPTQRAYKTI 520
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 59.7 bits (143), Expect = 7e-09 Identities = 42/139 (30%), Positives = 57/139 (41%) Frame = -3 Query: 646 GAMYIVIPGVLPVGCFPIYLTLYQTSNAGDYDQYGCLKRFNALSSRHNSLLQSKVTSLQS 467 GA I + G P+GC P + C + N + NS L + L Sbjct: 310 GARRIGVIGTPPIGCTPSQRVKKKKI---------CNEDLNYAAQLFNSKLVIILGQLSK 360 Query: 466 KYPYAKIMYADFYSHVFDMVKSPASYGFSTNLRACCGAGGGKYNYQNGARCGMSGASACG 287 P + I+Y D YS M++SP YGF + CC G K G C Sbjct: 361 TLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLTK----GGVFCKERTLKNMS 416 Query: 286 NPSSSLSWDGIHLTEAAYK 230 N SS L WDG+H ++ AY+ Sbjct: 417 NASSYLFWDGLHPSQRAYE 435
>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)| (Endo-1,4-beta-glucanase) (Cellulase) (Fragment) Length = 224 Score = 34.3 bits (77), Expect = 0.33 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = -3 Query: 280 SSSLSWDGIHLTEAAYKKIADGW 212 ++ +SWDG+HL+E Y KIA+ W Sbjct: 111 NTDISWDGLHLSEIGYTKIANIW 133
>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 630 Score = 34.3 bits (77), Expect = 0.33 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 7/58 (12%) Frame = -3 Query: 415 DMVKSPASYG---FSTNLRACCGAGGGKYNYQNGARCGMSG----ASACGNPSSSLSW 263 D K SYG S+N +GGG + NG G SG +S+ GNPS+S SW Sbjct: 572 DFRKQGGSYGGGASSSNWGGSSSSGGGWGSSNNGGYSGYSGRSNGSSSYGNPSASNSW 629
>RPC1_GIALA (P25202) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)| Length = 1741 Score = 31.6 bits (70), Expect = 2.1 Identities = 37/145 (25%), Positives = 51/145 (35%), Gaps = 11/145 (7%) Frame = -3 Query: 616 LPVGCFPIYLTLYQTS-------NAGDYDQYGCL-KRFNALSSRHNSLLQSKVTSLQSKY 461 L G FP+ L Y+ N Y Q CL +R N S S+L T+ Sbjct: 1193 LAEGAFPVLLDRYKAEAELDVLLNKDFYGQEACLIERSNVTSYFQQSILPKLTTNTHIAT 1252 Query: 460 PYAKIMYADFYSHVFDMVKSPASYGFSTNLRACCGAGGGKY---NYQNGARCGMSGASAC 290 A + A F + K F +R KY N + G+ CG A + Sbjct: 1253 TVAPALAASFLQTT--LTKKDID-DFLRQVRR-------KYIRLNLEPGSPCGAVAAQSV 1302 Query: 289 GNPSSSLSWDGIHLTEAAYKKIADG 215 G PS+ ++ H A I G Sbjct: 1303 GEPSTQMTLKSFHHAGLASMNITQG 1327
>PHCA2_FREDI (P08040) C-phycocyanin-2 alpha chain| Length = 162 Score = 30.4 bits (67), Expect = 4.8 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -3 Query: 523 ALSSRHNSLLQSKVTSLQSKYPYAKIMYA-DFYSHVFDMVKSPASYGFSTNLRACCGAGG 347 ALSS+ NSL Q V ++ K+PY M +F S K G+ + C G Sbjct: 43 ALSSKANSLAQGAVNAVYQKFPYTTQMQGKNFASDQRGKDKCARDIGYYIRIVTYCLVAG 102 Query: 346 G 344 G Sbjct: 103 G 103
>MAOC_FLATR (P22178) NADP-dependent malic enzyme, chloroplast precursor (EC| 1.1.1.40) (NADP-ME) Length = 648 Score = 30.0 bits (66), Expect = 6.2 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%) Frame = -3 Query: 643 AMYIVIPGVLPVGCFPIYLTLYQTSN---AGDYDQYGCLKRFNALSSRHNSLLQSKVTSL 473 A+Y + GV P C PI + + T+N D + Y LK+ A + L+ ++++ Sbjct: 268 ALYTALGGVRPSACLPITIDV-GTNNEKLLNDDEFYIGLKQKRAAGQEYAELMNEFMSAV 326 Query: 472 QSKY-PYAKIMYADFYSH-VFDMVK 404 + Y I + DF +H FD+++ Sbjct: 327 KQNYGENLLIQFEDFANHNAFDLLE 351
>NFAC1_HUMAN (O95644) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) Length = 943 Score = 30.0 bits (66), Expect = 6.2 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 2/96 (2%) Frame = -3 Query: 556 YDQYGCLKRFNALSSRHNSLLQSKVTSLQSKY--PYAKIMYADFYSHVFDMVKSPASYGF 383 Y CL ++LSSR S+ +S +S Y PYA + + S + GF Sbjct: 165 YRDPSCLSPASSLSSRS---CNSEASSYESNYSYPYASPQTSPWQSPCVSPKTTDPEEGF 221 Query: 382 STNLRACCGAGGGKYNYQNGARCGMSGASACGNPSS 275 L AC G +++ R ++ S G SS Sbjct: 222 PRGLGACTLLGSPRHSPSTSPRASVTEESWLGARSS 257 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,064,127 Number of Sequences: 219361 Number of extensions: 1490077 Number of successful extensions: 4696 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4433 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4680 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)