ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18g06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009201.1| Triticum aestivum clone wle1n.pk0009.e6:fis, full insert mRNA sequence Length = 1334 Score = 799 bits (403), Expect = 0.0 Identities = 460/479 (96%) Strand = Plus / Minus Query: 173 ctaggacagaatggccgggtggcagtacggcccgttgacccagccgtcggcgatcttctt 232 |||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1124 ctaggagaggatggccgggtggcagtagggcccgttgacccagccgtcggcgatcttctt 1065 Query: 233 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgca 292 ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 1064 gtaggccgcctccgtcaggtggatcccgtcccagctcagcgacgacgatgggttgccgca 1005 Query: 293 cgccgacgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcc 352 |||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 1004 cgccgacgcgccggacatgccgcacctagccccgttctggtagttgtacttgccgccgcc 945 Query: 353 cgcgccgcagcacgccctcaggttcgtgctgaacccgtagctggcggggctcttgaccat 412 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 944 cgcgccgcagcacgccctcaggttcgtgctgaacccgtagctagcggggctcttgaccat 885 Query: 413 gtcgaagacgtgggagtagaagtcggcgtacatgatcttggcgtaggggtacttgctctg 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 884 gtcgaagacgtgggagtagaagtcggcgtacatgatcttggcgtaggggtacttgccctg 825 Query: 473 caggctagtcaccttgctctggagcagcgagttgtggcgggacgacagcgcgttgaaccg 532 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 824 caggctggtcaccttgctctggagcagcgagttgtggcgggccgacagcgcgttgaaccg 765 Query: 533 cttcaggcacccgtactggtcgtagtcgccggcgttggaggtctggtacagcgtgaggta 592 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 764 cttcaggcagccgtactggtcgtagtcgccggcgttggaggtctggtagagcgtgaggta 705 Query: 593 gatggggaagcagcccacggggagcaccccggggatgacgatgtacatggcgcccagcc 651 ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 704 gatggggaagcagccgacggggagcaccccggggatgacgacgtacatggcgcccagcc 646 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 ccctccccagcttcgaggaaggaaa 124 |||||||||||||||||||| |||| Sbjct: 1189 ccctccccagcttcgaggaatgaaa 1165 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cgatgcttattcttgcaacacatc 28 ||||||||||||| |||||||||| Sbjct: 1258 cgatgcttattctcgcaacacatc 1235
>gb|AY104167.1| Zea mays PCO062696 mRNA sequence Length = 1460 Score = 498 bits (251), Expect = e-137 Identities = 413/467 (88%) Strand = Plus / Minus Query: 183 atggccgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcc 242 ||||||||||||||||| | |||| ||||||||||||||||||||||| | ||||||||| Sbjct: 1149 atggccgggtggcagtaggccccgctgacccagccgtcggcgatcttcctatacgccgcc 1090 Query: 243 tccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgccgacgcg 302 |||||||||||||||||||||||||| |||||||||| ||||| |||||| ||||| Sbjct: 1089 tccgtcaggtggatgccgtcccagctgagcgacgacgccgggtcagagcacgcgtacgcg 1030 Query: 303 cccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcag 362 || | ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1029 ccgggcatgccgcaccgcgcgccgttctggtagttgtacttgccgccgccggcgccgcag 970 Query: 363 cacgccctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcgaagacg 422 || ||||| ||||| |||||||||||||||||| |||||||||| ||||||||| | ||| Sbjct: 969 caggccctgaggttggtgctgaacccgtagctgccggggctcttcaccatgtcgtacacg 910 Query: 423 tgggagtagaagtcggcgtacatgatcttggcgtaggggtacttgctctgcaggctagtc 482 ||| |||||||||||||||||||| | ||| ||||||||||||||||||||| | | Sbjct: 909 tggctgtagaagtcggcgtacatgacccgcgcgccggggtacttgctctgcaggctcgac 850 Query: 483 accttgctctggagcagcgagttgtggcgggacgacagcgcgttgaaccgcttcaggcac 542 |||||| ||| |||||||||||||| | | ||||||||||||||| ||||||||||| Sbjct: 849 accttggcctgcagcagcgagttgtgctgcgccgacagcgcgttgaagcgcttcaggcag 790 Query: 543 ccgtactggtcgtagtcgccggcgttggaggtctggtacagcgtgaggtagatggggaag 602 |||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||| Sbjct: 789 ccgtactggtcgtagtcgccggcgctggaggtctggtacagcgtcaggtagatcgggaag 730 Query: 603 cagcccacggggagcaccccggggatgacgatgtacatggcgcccag 649 || |||||||| ||||| || |||| || | ||||||||||||||| Sbjct: 729 caccccacgggcagcacgcccgggaccaccacgtacatggcgcccag 683
>dbj|AK121780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093M11, full insert sequence Length = 1430 Score = 452 bits (228), Expect = e-124 Identities = 405/464 (87%) Strand = Plus / Minus Query: 188 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 247 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 1133 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 1074 Query: 248 caggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgccgacgcgcccga 307 || ||||||||||||||||||| |||||||||||||||| |||||| | || ||||| Sbjct: 1073 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 1014 Query: 308 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 367 ||||||||||| |||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 1013 catgccgcacctcgcgccgttctggtagttgtacttccctcctcccgccccgcagcacgc 954 Query: 368 cctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcgaagacgtggga 427 ||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||| Sbjct: 953 cctcaaattcgtgctaaacccgtagttggagggggatttgaccatgtcgtagacgtggga 894 Query: 428 gtagaagtcggcgtacatgatcttggcgtaggggtacttgctctgcaggctagtcacctt 487 ||||||||||||||||||||| || |||||||||||||||| ||| | ||||| Sbjct: 893 gtagaagtcggcgtacatgatgcgagcccaggggtacttgctctggagggaggagacctt 834 Query: 488 gctctggagcagcgagttgtggcgggacgacagcgcgttgaaccgcttcaggcacccgta 547 | |||||| || ||||| |||||||| || || | |||||| || | ||||| ||||| Sbjct: 833 ggcctggaggagggagttatggcgggaggagagggtgttgaagcgggtgaggcagccgta 774 Query: 548 ctggtcgtagtcgccggcgttggaggtctggtacagcgtgaggtagatggggaagcagcc 607 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 773 ctggtcgtagtcgccggcgttggaggtgccgtacagcgtgaggtagatggggaagcagcc 714 Query: 608 cacggggagcaccccggggatgacgatgtacatggcgcccagcc 651 ||||||||||| ||||||| ||||| ||||||||||||||||| Sbjct: 713 gacggggagcacgccggggacgacgacgtacatggcgcccagcc 670
>dbj|AK104883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H08, full insert sequence Length = 1429 Score = 452 bits (228), Expect = e-124 Identities = 405/464 (87%) Strand = Plus / Minus Query: 188 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 247 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 1132 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 1073 Query: 248 caggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgccgacgcgcccga 307 || ||||||||||||||||||| |||||||||||||||| |||||| | || ||||| Sbjct: 1072 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 1013 Query: 308 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 367 ||||||||||| |||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 1012 catgccgcacctcgcgccgttctggtagttgtacttccctcctcccgccccgcagcacgc 953 Query: 368 cctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcgaagacgtggga 427 ||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||| Sbjct: 952 cctcaaattcgtgctaaacccgtagttggagggggatttgaccatgtcgtagacgtggga 893 Query: 428 gtagaagtcggcgtacatgatcttggcgtaggggtacttgctctgcaggctagtcacctt 487 ||||||||||||||||||||| || |||||||||||||||| ||| | ||||| Sbjct: 892 gtagaagtcggcgtacatgatgcgagcccaggggtacttgctctggagggaggagacctt 833 Query: 488 gctctggagcagcgagttgtggcgggacgacagcgcgttgaaccgcttcaggcacccgta 547 | |||||| || ||||| |||||||| || || | |||||| || | ||||| ||||| Sbjct: 832 ggcctggaggagggagttatggcgggaggagagggtgttgaagcgggtgaggcagccgta 773 Query: 548 ctggtcgtagtcgccggcgttggaggtctggtacagcgtgaggtagatggggaagcagcc 607 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 772 ctggtcgtagtcgccggcgttggaggtgccgtacagcgtgaggtagatggggaagcagcc 713 Query: 608 cacggggagcaccccggggatgacgatgtacatggcgcccagcc 651 ||||||||||| ||||||| ||||| ||||||||||||||||| Sbjct: 712 gacggggagcacgccggggacgacgacgtacatggcgcccagcc 669
>dbj|AK104394.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C04, full insert sequence Length = 1417 Score = 452 bits (228), Expect = e-124 Identities = 405/464 (87%) Strand = Plus / Minus Query: 188 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 247 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 1130 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 1071 Query: 248 caggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgccgacgcgcccga 307 || ||||||||||||||||||| |||||||||||||||| |||||| | || ||||| Sbjct: 1070 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 1011 Query: 308 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 367 ||||||||||| |||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 1010 catgccgcacctcgcgccgttctggtagttgtacttccctcctcccgccccgcagcacgc 951 Query: 368 cctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcgaagacgtggga 427 ||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||| Sbjct: 950 cctcaaattcgtgctaaacccgtagttggagggggatttgaccatgtcgtagacgtggga 891 Query: 428 gtagaagtcggcgtacatgatcttggcgtaggggtacttgctctgcaggctagtcacctt 487 ||||||||||||||||||||| || |||||||||||||||| ||| | ||||| Sbjct: 890 gtagaagtcggcgtacatgatgcgagcccaggggtacttgctctggagggaggagacctt 831 Query: 488 gctctggagcagcgagttgtggcgggacgacagcgcgttgaaccgcttcaggcacccgta 547 | |||||| || ||||| |||||||| || || | |||||| || | ||||| ||||| Sbjct: 830 ggcctggaggagggagttatggcgggaggagagggtgttgaagcgggtgaggcagccgta 771 Query: 548 ctggtcgtagtcgccggcgttggaggtctggtacagcgtgaggtagatggggaagcagcc 607 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 770 ctggtcgtagtcgccggcgttggaggtgccgtacagcgtgaggtagatggggaagcagcc 711 Query: 608 cacggggagcaccccggggatgacgatgtacatggcgcccagcc 651 ||||||||||| ||||||| ||||| ||||||||||||||||| Sbjct: 710 gacggggagcacgccggggacgacgacgtacatggcgcccagcc 667
>dbj|AK061497.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D03, full insert sequence Length = 1450 Score = 444 bits (224), Expect = e-121 Identities = 404/464 (87%) Strand = Plus / Minus Query: 188 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 247 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 1130 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 1071 Query: 248 caggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgccgacgcgcccga 307 || ||||||||||||||||||| |||||||||||||||| |||||| | || ||||| Sbjct: 1070 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 1011 Query: 308 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 367 ||||||||||| ||||||||||||||||| |||||| || || ||||| ||||||||||| Sbjct: 1010 catgccgcacctcgcgccgttctggtagtagtacttccctcctcccgccccgcagcacgc 951 Query: 368 cctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcgaagacgtggga 427 ||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||| Sbjct: 950 cctcaaattcgtgctaaacccgtagttggagggggatttgaccatgtcgtagacgtggga 891 Query: 428 gtagaagtcggcgtacatgatcttggcgtaggggtacttgctctgcaggctagtcacctt 487 ||||||||||||||||||||| || |||||||||||||||| ||| | ||||| Sbjct: 890 gtagaagtcggcgtacatgatgcgagcccaggggtacttgctctggagggaggagacctt 831 Query: 488 gctctggagcagcgagttgtggcgggacgacagcgcgttgaaccgcttcaggcacccgta 547 | |||||| || ||||| |||||||| || || | |||||| || | ||||| ||||| Sbjct: 830 ggcctggaggagggagttatggcgggaggagagggtgttgaagcgggtgaggcagccgta 771 Query: 548 ctggtcgtagtcgccggcgttggaggtctggtacagcgtgaggtagatggggaagcagcc 607 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 770 ctggtcgtagtcgccggcgttggaggtgccgtacagcgtgaggtagatggggaagcagcc 711 Query: 608 cacggggagcaccccggggatgacgatgtacatggcgcccagcc 651 ||||||||||| ||||||| ||||| ||||||||||||||||| Sbjct: 710 gacggggagcacgccggggacgacgacgtacatggcgcccagcc 667
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 240 bits (121), Expect = 5e-60 Identities = 181/201 (90%) Strand = Plus / Minus Query: 188 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 247 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 2894499 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 2894440 Query: 248 caggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgccgacgcgcccga 307 || ||||||||||||||||||| |||||||||||||||| |||||| | || ||||| Sbjct: 2894439 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 2894380 Query: 308 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 367 ||||||||||| |||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 2894379 catgccgcacctcgcgccgttctggtagttgtacttccctcctcccgccccgcagcacgc 2894320 Query: 368 cctcaggttcgtgctgaaccc 388 ||||| |||||||| ||||| Sbjct: 2894319 cctcaaattcgtgctaaaccc 2894299 Score = 220 bits (111), Expect = 4e-54 Identities = 213/247 (86%) Strand = Plus / Minus Query: 405 ttgaccatgtcgaagacgtgggagtagaagtcggcgtacatgatcttggcgtaggggtac 464 |||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 2893820 ttgaccatgtcgtagacgtgggagtagaagtcggcgtacatgatgcgagcccaggggtac 2893761 Query: 465 ttgctctgcaggctagtcaccttgctctggagcagcgagttgtggcgggacgacagcgcg 524 |||||||| ||| | |||||| |||||| || ||||| |||||||| || || | | Sbjct: 2893760 ttgctctggagggaggagaccttggcctggaggagggagttatggcgggaggagagggtg 2893701 Query: 525 ttgaaccgcttcaggcacccgtactggtcgtagtcgccggcgttggaggtctggtacagc 584 ||||| || | ||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 2893700 ttgaagcgggtgaggcagccgtactggtcgtagtcgccggcgttggaggtgccgtacagc 2893641 Query: 585 gtgaggtagatggggaagcagcccacggggagcaccccggggatgacgatgtacatggcg 644 ||||||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||| Sbjct: 2893640 gtgaggtagatggggaagcagccgacggggagcacgccggggacgacgacgtacatggcg 2893581 Query: 645 cccagcc 651 ||||||| Sbjct: 2893580 cccagcc 2893574 Score = 95.6 bits (48), Expect = 2e-16 Identities = 141/172 (81%) Strand = Plus / Plus Query: 195 cagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtgg 254 |||||||| ||||||| ||||||||| | ||||| |||||| || ||||| || |||||| Sbjct: 2907358 cagtacgggccgttgagccagccgtcagtgatctgcttgtaagctgcctcggtgaggtgg 2907417 Query: 255 atgccgtcccagctcagcgacgacgacgggttgccgcacgccgacgcgcccgacatgccg 314 |||||||||||||| || ||||| ||||||| |||||| || ||||| ||||| || Sbjct: 2907418 atgccgtcccagctaagatgcgacgccgggttggagcacgctgatgcgcctgacatccca 2907477 Query: 315 caccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacg 366 |||| |||| ||| | ||||||| ||||||| ||||| | |||||||||| Sbjct: 2907478 cacctcgcgttgttgttgtagttgaacttgccgccgcctgacccgcagcacg 2907529 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 585 gtgaggtagatggggaagcagcccacggggagcaccccggggatgacga 633 ||||||||||||||||||||||| | ||||||||| ||||||| ||||| Sbjct: 2908536 gtgaggtagatggggaagcagccgatggggagcacgccggggacgacga 2908584 Score = 61.9 bits (31), Expect = 2e-06 Identities = 153/191 (80%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 179 cagaatggccgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgc 238 |||||||| |||||||||||| || || ||| ||||||| ||||||| | || ||| Sbjct: 1572797 cagaatgggcgggtggcagtagggtcccctgagccagccgccggcgatgacccggttcgc 1572738 Query: 239 cgcctccgtcaggtggatgccgtcccagctcagcgacg-acgacgggttgccgcacgccg 297 |||||||||| ||| ||||||||||| || || || |||||||||| ||||||| | Sbjct: 1572737 cgcctccgtcgtgtgcgcgccgtcccagcaca-cggcgctcgacgggttggcgcacgcgg 1572679 Query: 298 acgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgc 357 |||||| ||||||||||||||| ||| || ||||||||| ||| || ||||||| Sbjct: 1572678 cggcgcccctcatgccgcaccgcgccacgtactcccagttgtactcgccgccccccgcgc 1572619 Query: 358 cgcagcacgcc 368 ||||||||||| Sbjct: 1572618 cgcagcacgcc 1572608 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 407 gaccatgtcgaagacgtgggagtagaagtcggcgtacatgat 448 |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 2908358 gaccatgtcgtagacgccggagtagaagtcggcgtacatgat 2908399 Score = 58.0 bits (29), Expect = 4e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 236 cgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgc 295 ||||||||||||| ||||| ||||||||||| || | |||||||| | |||||| Sbjct: 2899331 cgccgcctccgtcgtgtggacgccgtcccagcacacgtgcctcgacgggtcacggcacgc 2899272 Query: 296 cgacgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgc 355 || ||||||| ||| ||||||||||| || || ||||||||||| || ||||| || Sbjct: 2899271 cgccgcgcccttcatcccgcaccgcgcctcgaactcgtagttgtactccccgccgccggc 2899212 Query: 356 gccgcagcacgcc 368 ||||||||||||| Sbjct: 2899211 gccgcagcacgcc 2899199 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 332 gtagttgtacttgcccccgcccgcgccgcagcacgccct 370 ||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 28598037 gtagttgtactcgccgccgccggcgccgcagcacgccct 28598075 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 246 gtcaggtggatgccgtcccagctcagcgacgacgacgggttg 287 |||| |||||||||||||||||||| |||||||||||||| Sbjct: 19518652 gtcatgtggatgccgtcccagctcacgtacgacgacgggttg 19518693 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 490 tctggagcagcgagttgtggcgggacgacagcgcgttgaaccgcttcaggcacccgtact 549 |||| ||||||||||||||| || | |||| |||||| | |||||||||| ||||| | Sbjct: 1572444 tctgcagcagcgagttgtggtggatggccagctcgttgagcggcttcaggcagccgtagt 1572385 Query: 550 ggtcgtagtcg 560 |||||||||| Sbjct: 1572384 cgtcgtagtcg 1572374 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 aggactaggactaggactagga 178 |||||||||||||||||||||| Sbjct: 4780543 aggactaggactaggactagga 4780522 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gatcctcccctcccctcccc 107 |||||||||||||||||||| Sbjct: 18634548 gatcctcccctcccctcccc 18634567
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 240 bits (121), Expect = 5e-60 Identities = 181/201 (90%) Strand = Plus / Minus Query: 188 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 247 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 137980 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 137921 Query: 248 caggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgccgacgcgcccga 307 || ||||||||||||||||||| |||||||||||||||| |||||| | || ||||| Sbjct: 137920 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 137861 Query: 308 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 367 ||||||||||| |||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 137860 catgccgcacctcgcgccgttctggtagttgtacttccctcctcccgccccgcagcacgc 137801 Query: 368 cctcaggttcgtgctgaaccc 388 ||||| |||||||| ||||| Sbjct: 137800 cctcaaattcgtgctaaaccc 137780 Score = 220 bits (111), Expect = 4e-54 Identities = 213/247 (86%) Strand = Plus / Minus Query: 405 ttgaccatgtcgaagacgtgggagtagaagtcggcgtacatgatcttggcgtaggggtac 464 |||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 137301 ttgaccatgtcgtagacgtgggagtagaagtcggcgtacatgatgcgagcccaggggtac 137242 Query: 465 ttgctctgcaggctagtcaccttgctctggagcagcgagttgtggcgggacgacagcgcg 524 |||||||| ||| | |||||| |||||| || ||||| |||||||| || || | | Sbjct: 137241 ttgctctggagggaggagaccttggcctggaggagggagttatggcgggaggagagggtg 137182 Query: 525 ttgaaccgcttcaggcacccgtactggtcgtagtcgccggcgttggaggtctggtacagc 584 ||||| || | ||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 137181 ttgaagcgggtgaggcagccgtactggtcgtagtcgccggcgttggaggtgccgtacagc 137122 Query: 585 gtgaggtagatggggaagcagcccacggggagcaccccggggatgacgatgtacatggcg 644 ||||||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||| Sbjct: 137121 gtgaggtagatggggaagcagccgacggggagcacgccggggacgacgacgtacatggcg 137062 Query: 645 cccagcc 651 ||||||| Sbjct: 137061 cccagcc 137055 Score = 58.0 bits (29), Expect = 4e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 236 cgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgc 295 ||||||||||||| ||||| ||||||||||| || | |||||||| | |||||| Sbjct: 142812 cgccgcctccgtcgtgtggacgccgtcccagcacacgtgcctcgacgggtcacggcacgc 142753 Query: 296 cgacgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgc 355 || ||||||| ||| ||||||||||| || || ||||||||||| || ||||| || Sbjct: 142752 cgccgcgcccttcatcccgcaccgcgcctcgaactcgtagttgtactccccgccgccggc 142693 Query: 356 gccgcagcacgcc 368 ||||||||||||| Sbjct: 142692 gccgcagcacgcc 142680
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 240 bits (121), Expect = 5e-60 Identities = 181/201 (90%) Strand = Plus / Minus Query: 188 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 247 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 54645 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 54586 Query: 248 caggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgccgacgcgcccga 307 || ||||||||||||||||||| |||||||||||||||| |||||| | || ||||| Sbjct: 54585 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 54526 Query: 308 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 367 ||||||||||| |||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 54525 catgccgcacctcgcgccgttctggtagttgtacttccctcctcccgccccgcagcacgc 54466 Query: 368 cctcaggttcgtgctgaaccc 388 ||||| |||||||| ||||| Sbjct: 54465 cctcaaattcgtgctaaaccc 54445 Score = 220 bits (111), Expect = 4e-54 Identities = 213/247 (86%) Strand = Plus / Minus Query: 405 ttgaccatgtcgaagacgtgggagtagaagtcggcgtacatgatcttggcgtaggggtac 464 |||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 53966 ttgaccatgtcgtagacgtgggagtagaagtcggcgtacatgatgcgagcccaggggtac 53907 Query: 465 ttgctctgcaggctagtcaccttgctctggagcagcgagttgtggcgggacgacagcgcg 524 |||||||| ||| | |||||| |||||| || ||||| |||||||| || || | | Sbjct: 53906 ttgctctggagggaggagaccttggcctggaggagggagttatggcgggaggagagggtg 53847 Query: 525 ttgaaccgcttcaggcacccgtactggtcgtagtcgccggcgttggaggtctggtacagc 584 ||||| || | ||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 53846 ttgaagcgggtgaggcagccgtactggtcgtagtcgccggcgttggaggtgccgtacagc 53787 Query: 585 gtgaggtagatggggaagcagcccacggggagcaccccggggatgacgatgtacatggcg 644 ||||||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||| Sbjct: 53786 gtgaggtagatggggaagcagccgacggggagcacgccggggacgacgacgtacatggcg 53727 Query: 645 cccagcc 651 ||||||| Sbjct: 53726 cccagcc 53720 Score = 95.6 bits (48), Expect = 2e-16 Identities = 141/172 (81%) Strand = Plus / Plus Query: 195 cagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtgg 254 |||||||| ||||||| ||||||||| | ||||| |||||| || ||||| || |||||| Sbjct: 67504 cagtacgggccgttgagccagccgtcagtgatctgcttgtaagctgcctcggtgaggtgg 67563 Query: 255 atgccgtcccagctcagcgacgacgacgggttgccgcacgccgacgcgcccgacatgccg 314 |||||||||||||| || ||||| ||||||| |||||| || ||||| ||||| || Sbjct: 67564 atgccgtcccagctaagatgcgacgccgggttggagcacgctgatgcgcctgacatccca 67623 Query: 315 caccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacg 366 |||| |||| ||| | ||||||| ||||||| ||||| | |||||||||| Sbjct: 67624 cacctcgcgttgttgttgtagttgaacttgccgccgcctgacccgcagcacg 67675 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 585 gtgaggtagatggggaagcagcccacggggagcaccccggggatgacga 633 ||||||||||||||||||||||| | ||||||||| ||||||| ||||| Sbjct: 68682 gtgaggtagatggggaagcagccgatggggagcacgccggggacgacga 68730 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 407 gaccatgtcgaagacgtgggagtagaagtcggcgtacatgat 448 |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 68504 gaccatgtcgtagacgccggagtagaagtcggcgtacatgat 68545 Score = 58.0 bits (29), Expect = 4e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 236 cgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgc 295 ||||||||||||| ||||| ||||||||||| || | |||||||| | |||||| Sbjct: 59477 cgccgcctccgtcgtgtggacgccgtcccagcacacgtgcctcgacgggtcacggcacgc 59418 Query: 296 cgacgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgc 355 || ||||||| ||| ||||||||||| || || ||||||||||| || ||||| || Sbjct: 59417 cgccgcgcccttcatcccgcaccgcgcctcgaactcgtagttgtactccccgccgccggc 59358 Query: 356 gccgcagcacgcc 368 ||||||||||||| Sbjct: 59357 gccgcagcacgcc 59345
>gb|AY103823.1| Zea mays PCO141891 mRNA sequence Length = 1313 Score = 234 bits (118), Expect = 3e-58 Identities = 229/266 (86%) Strand = Plus / Minus Query: 183 atggccgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcc 242 ||||| ||| ||||||| |||||||||| ||||||||||| ||||| |||||| || ||| Sbjct: 1188 atggcggggcggcagtagggcccgttgagccagccgtcggtgatctgcttgtaggcggcc 1129 Query: 243 tccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgccgacgcg 302 || || |||||||||||||||||||| || ||||| |||| || |||||| |||||| Sbjct: 1128 tcggtgaggtggatgccgtcccagctgaggtgcgacgccgggctggagcacgcggacgcg 1069 Query: 303 cccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcag 362 |||||||||||||||||||||| ||||||||||||||||||||| || |||| |||||| Sbjct: 1068 cccgacatgccgcaccgcgcgctgttctggtagttgtacttgccgccccccgacccgcag 1009 Query: 363 cacgccctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcgaagacg 422 |||||| | || |||||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 1008 cacgcctggaacaccgagctgaacccgtagctgccggggttcttgaccatgtcgtagacg 949 Query: 423 tgggagtagaagtcggcgtacatgat 448 |||||||||||||||||||||||| Sbjct: 948 gcggagtagaagtcggcgtacatgat 923 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 585 gtgaggtagatggggaagcagcccacggggagcac 619 ||||||||||||||||||||||| | ||||||||| Sbjct: 786 gtgaggtagatggggaagcagccgatggggagcac 752
>gb|BT019092.1| Zea mays clone Contig690.F mRNA sequence Length = 811 Score = 174 bits (88), Expect = 2e-40 Identities = 229/272 (84%), Gaps = 3/272 (1%) Strand = Plus / Minus Query: 180 agaatggccgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgcc 239 |||||||||||| ||||||| |||||||||| ||||||||||| ||||| ||||||||| Sbjct: 561 agaatggccgggcggcagtagggcccgttgagccagccgtcggtgatctgcttgtacgcg 502 Query: 240 gcctccgtcaggtggatgccgtcccagctcagcgacgacg-acgggttgccgcacgccga 298 ||||| || |||||||||||||||||||| || || || ||||||| |||||| || Sbjct: 501 gcctcggtgaggtggatgccgtcccagctgaggtgcgccgcccgggttggagcacgcgga 442 Query: 299 cgcgccc-gacatgccgca-ccgcgcgccgttctggtagttgtacttgcccccgcccgcg 356 |||||| | ||||||||| |||||||| ||||||||||||||||||||| || || | Sbjct: 441 ggcgcccgggcatgccgcacccgcgcgctgttctggtagttgtacttgccgcctccggac 382 Query: 357 ccgcagcacgccctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcg 416 |||||||||| | | ||||||||||||||||||| | || |||||||||||||| Sbjct: 381 ccgcagcacgtctggaacgccgtgctgaacccgtagctgcctggattcttgaccatgtcg 322 Query: 417 aagacgtgggagtagaagtcggcgtacatgat 448 ||||| |||||||||||||||||||||||| Sbjct: 321 tagacggcggagtagaagtcggcgtacatgat 290 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 585 gtgaggtagatggggaagcagcccacggggagcaccccggg 625 ||||||||||||||||||||||| | |||||| || ||||| Sbjct: 153 gtgaggtagatggggaagcagccgatggggaggacgccggg 113
>gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full insert mRNA sequence Length = 1634 Score = 129 bits (65), Expect = 1e-26 Identities = 200/245 (81%) Strand = Plus / Minus Query: 204 ccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtggatgccgtcc 263 ||||||| ||||||||||| ||||| |||||| || ||||| || ||||||||||||||| Sbjct: 1216 ccgttgagccagccgtcggtgatctgcttgtaggcggcctcggtgaggtggatgccgtcc 1157 Query: 264 cagctcagcgacgacgacgggttgccgcacgccgacgcgcccgacatgccgcaccgcgcg 323 ||||| || ||||| |||| || |||| || || ||||| |||||||||||||||||| Sbjct: 1156 cagctgaggtgcgacgccgggctggcgcaggcggaggcgccggacatgccgcaccgcgcg 1097 Query: 324 ccgttctggtagttgtacttgcccccgcccgcgccgcagcacgccctcaggttcgtgctg 383 | ||| ||||||||||||||| || |||| |||||||||||| | || |||| Sbjct: 1096 ctgttggcgtagttgtacttgcctccccccgacccgcagcacgcctcgaacaccgagctg 1037 Query: 384 aacccgtagctggcggggctcttgaccatgtcgaagacgtgggagtagaagtcggcgtac 443 |||||||| || |||||||| |||||||||| | || || |||||||||||||||| Sbjct: 1036 aacccgtatttgctggggctctggaccatgtcgtacaccccggcgtagaagtcggcgtac 977 Query: 444 atgat 448 ||||| Sbjct: 976 atgat 972 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 551 gtcgtagtcgccggcgttggaggtctggtacagcgtgaggtagatggggaagcagcccac 610 |||||||||| ||||| ||||||| ||| | ||||||||||||||||||||||| | Sbjct: 869 gtcgtagtcggcggcgctggaggtgccgtagatggtgaggtagatggggaagcagccgat 810 Query: 611 ggggagcacccc 622 |||||||||||| Sbjct: 809 ggggagcacccc 798
>dbj|AK066113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051I09, full insert sequence Length = 1392 Score = 107 bits (54), Expect = 5e-20 Identities = 204/254 (80%) Strand = Plus / Minus Query: 195 cagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtgg 254 |||||||| ||||||| ||||||||| | ||||| |||||| || ||||| || |||||| Sbjct: 1074 cagtacgggccgttgagccagccgtcagtgatctgcttgtaagctgcctcggtgaggtgg 1015 Query: 255 atgccgtcccagctcagcgacgacgacgggttgccgcacgccgacgcgcccgacatgccg 314 |||||||||||||| || ||||| ||||||| |||||| || ||||| ||||| || Sbjct: 1014 atgccgtcccagctaagatgcgacgccgggttggagcacgctgatgcgcctgacatccca 955 Query: 315 caccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgccctcagg 374 |||| |||| ||| | ||||||| ||||||| ||||| | |||||||||| | | Sbjct: 954 cacctcgcgttgttgttgtagttgaacttgccgccgcctgacccgcagcacgtctcgaac 895 Query: 375 ttcgtgctgaacccgtagctggcggggctcttgaccatgtcgaagacgtgggagtagaag 434 |||||| || |||||| || ||||| | |||||||||| ||||| |||||||||| Sbjct: 894 accgtgctaaatccgtagttgccggggttgcggaccatgtcgtagacgccggagtagaag 835 Query: 435 tcggcgtacatgat 448 |||||||||||||| Sbjct: 834 tcggcgtacatgat 821 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 585 gtgaggtagatggggaagcagcccacggggagcaccccggggatgacga 633 ||||||||||||||||||||||| | ||||||||| ||||||| ||||| Sbjct: 684 gtgaggtagatggggaagcagccgatggggagcacgccggggacgacga 636
>gb|AY107565.1| Zea mays PCO081097 mRNA sequence Length = 916 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 550 ggtcgtagtcgccggcgttggaggtctggtacagcgtgaggtagatggggaagcagccca 609 ||||||||||| ||||||||||||| ||| || ||||||||||||||||||||||| | Sbjct: 229 ggtcgtagtcggcggcgttggaggtgccgtagagggtgaggtagatggggaagcagccga 170 Query: 610 cggggagcaccccggg 625 ||||||||||||||| Sbjct: 169 tggggagcaccccggg 154 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 423 tgggagtagaagtcggcgtacatgatc 449 |||| |||||||||||||||||||||| Sbjct: 356 tgggtgtagaagtcggcgtacatgatc 330 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 |||||||| || |||||||||||||||||| Sbjct: 545 gccgcctcggtgaggtggatgccgtcccag 516
>ref|NM_185495.1| Oryza sativa (japonica cultivar-group), Ozsa8592 predicted mRNA Length = 642 Score = 61.9 bits (31), Expect = 2e-06 Identities = 153/191 (80%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 179 cagaatggccgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgc 238 |||||||| |||||||||||| || || ||| ||||||| ||||||| | || ||| Sbjct: 636 cagaatgggcgggtggcagtagggtcccctgagccagccgccggcgatgacccggttcgc 577 Query: 239 cgcctccgtcaggtggatgccgtcccagctcagcgacg-acgacgggttgccgcacgccg 297 |||||||||| ||| ||||||||||| || || || |||||||||| ||||||| | Sbjct: 576 cgcctccgtcgtgtgcgcgccgtcccagcaca-cggcgctcgacgggttggcgcacgcgg 518 Query: 298 acgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgc 357 |||||| ||||||||||||||| ||| || ||||||||| ||| || ||||||| Sbjct: 517 cggcgcccctcatgccgcaccgcgccacgtactcccagttgtactcgccgccccccgcgc 458 Query: 358 cgcagcacgcc 368 ||||||||||| Sbjct: 457 cgcagcacgcc 447 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 490 tctggagcagcgagttgtggcgggacgacagcgcgttgaaccgcttcaggcacccgtact 549 |||| ||||||||||||||| || | |||| |||||| | |||||||||| ||||| | Sbjct: 283 tctgcagcagcgagttgtggtggatggccagctcgttgagcggcttcaggcagccgtagt 224 Query: 550 ggtcgtagtcg 560 |||||||||| Sbjct: 223 cgtcgtagtcg 213
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0538C01 Length = 155643 Score = 61.9 bits (31), Expect = 2e-06 Identities = 153/191 (80%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 179 cagaatggccgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgc 238 |||||||| |||||||||||| || || ||| ||||||| ||||||| | || ||| Sbjct: 101521 cagaatgggcgggtggcagtagggtcccctgagccagccgccggcgatgacccggttcgc 101462 Query: 239 cgcctccgtcaggtggatgccgtcccagctcagcgacg-acgacgggttgccgcacgccg 297 |||||||||| ||| ||||||||||| || || || |||||||||| ||||||| | Sbjct: 101461 cgcctccgtcgtgtgcgcgccgtcccagcaca-cggcgctcgacgggttggcgcacgcgg 101403 Query: 298 acgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgc 357 |||||| ||||||||||||||| ||| || ||||||||| ||| || ||||||| Sbjct: 101402 cggcgcccctcatgccgcaccgcgccacgtactcccagttgtactcgccgccccccgcgc 101343 Query: 358 cgcagcacgcc 368 ||||||||||| Sbjct: 101342 cgcagcacgcc 101332 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 490 tctggagcagcgagttgtggcgggacgacagcgcgttgaaccgcttcaggcacccgtact 549 |||| ||||||||||||||| || | |||| |||||| | |||||||||| ||||| | Sbjct: 101168 tctgcagcagcgagttgtggtggatggccagctcgttgagcggcttcaggcagccgtagt 101109 Query: 550 ggtcgtagtcg 560 |||||||||| Sbjct: 101108 cgtcgtagtcg 101098
>ref|XM_466655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1212 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 334 agttgtacttgcccccgcccgcgccgcagcacgc 367 ||||||||||||| |||||||||||||||||||| Sbjct: 1039 agttgtacttgccgccgcccgcgccgcagcacgc 1006
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 334 agttgtacttgcccccgcccgcgccgcagcacgc 367 ||||||||||||| |||||||||||||||||||| Sbjct: 23912824 agttgtacttgccgccgcccgcgccgcagcacgc 23912857 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 245 cgtcaggtggatgccgtcccagctca 270 ||||||||||| |||||||||||||| Sbjct: 23682105 cgtcaggtggacgccgtcccagctca 23682130
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 334 agttgtacttgcccccgcccgcgccgcagcacgc 367 ||||||||||||| |||||||||||||||||||| Sbjct: 134490 agttgtacttgccgccgcccgcgccgcagcacgc 134523
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0496E03 Length = 138622 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 334 agttgtacttgcccccgcccgcgccgcagcacgc 367 ||||||||||||| |||||||||||||||||||| Sbjct: 46788 agttgtacttgccgccgcccgcgccgcagcacgc 46821
>dbj|AK107226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D10, full insert sequence Length = 1439 Score = 58.0 bits (29), Expect = 4e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 236 cgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgcacgc 295 ||||||||||||| ||||| ||||||||||| || | |||||||| | |||||| Sbjct: 1172 cgccgcctccgtcgtgtggacgccgtcccagcacacgtgcctcgacgggtcacggcacgc 1113 Query: 296 cgacgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgc 355 || ||||||| ||| ||||||||||| || || ||||||||||| || ||||| || Sbjct: 1112 cgccgcgcccttcatcccgcaccgcgcctcgaactcgtagttgtactccccgccgccggc 1053 Query: 356 gccgcagcacgcc 368 ||||||||||||| Sbjct: 1052 gccgcagcacgcc 1040
>ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa8155 predicted mRNA Length = 1110 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccagct 268 ||||||||||| |||||||||||||||||||| Sbjct: 1034 gccgcctccgtgaggtggatgccgtcccagct 1003
>ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa8151 predicted mRNA Length = 1137 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccagct 268 ||||||||||| |||||||||||||||||||| Sbjct: 1061 gccgcctccgtgaggtggatgccgtcccagct 1030
>gb|BT017832.1| Zea mays clone EL01N0509A10.c mRNA sequence Length = 1420 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 232 tgtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttg 287 ||||||| || || |||| |||||||||||||||||||| |||||||||||||| Sbjct: 1177 tgtacgcagcttcggtcatgtggatgccgtcccagctcacgtacgacgacgggttg 1122
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccagct 268 ||||||||||| |||||||||||||||||||| Sbjct: 6380761 gccgcctccgtgaggtggatgccgtcccagct 6380730 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccagct 268 ||||||||||| |||||||||||||||||||| Sbjct: 6365981 gccgcctccgtgaggtggatgccgtcccagct 6365950 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 ||||||||||||||||||| |||||||||| Sbjct: 6362381 gccgcctccgtcaggtggacgccgtcccag 6362352 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 ||||||||||| |||||||||||||||||| Sbjct: 6342892 gccgcctccgtgaggtggatgccgtcccag 6342863 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 551 gtcgtagtcgccggcgttggaggtctggtacagcgtgaggta 592 |||||||||| ||| ||||||| ||||||||||||| ||||| Sbjct: 6267552 gtcgtagtcgtcggagttggagctctggtacagcgtcaggta 6267511 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Minus Query: 233 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgca 292 |||||||||||| || ||||| | |||||||||| ||| ||| |||||||| |||||| Sbjct: 6305209 gtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgccgca 6305150 Query: 293 cgccgacgcgcccgacatgccgcaccgcgcgc 324 | | | | | |||| |||||||||| |||||| Sbjct: 6305149 cacggtcacccccgccatgccgcactgcgcgc 6305118 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 240 gcctccgtcaggtggatgccgtcccag 266 |||||||||||||||| |||||||||| Sbjct: 6321000 gcctccgtcaggtggacgccgtcccag 6320974 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 239 cgcctccgtcaggtggatgccgtcccagctc 269 |||||| || ||||||||||||||||||||| Sbjct: 6282169 cgcctcggtgaggtggatgccgtcccagctc 6282139 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 ||||||||||| |||||||| ||||||||| Sbjct: 6356916 gccgcctccgtgaggtggatcccgtcccag 6356887 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 491 ctggagcagcgagttgtggcggga 514 ||||||||||||||||||| |||| Sbjct: 6733840 ctggagcagcgagttgtggtggga 6733863
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccagct 268 ||||||||||| |||||||||||||||||||| Sbjct: 3156 gccgcctccgtgaggtggatgccgtcccagct 3125
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccagct 268 ||||||||||| |||||||||||||||||||| Sbjct: 151827 gccgcctccgtgaggtggatgccgtcccagct 151796 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccagct 268 ||||||||||| |||||||||||||||||||| Sbjct: 137047 gccgcctccgtgaggtggatgccgtcccagct 137016 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 ||||||||||||||||||| |||||||||| Sbjct: 133447 gccgcctccgtcaggtggacgccgtcccag 133418 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 ||||||||||| |||||||||||||||||| Sbjct: 113958 gccgcctccgtgaggtggatgccgtcccag 113929 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 551 gtcgtagtcgccggcgttggaggtctggtacagcgtgaggta 592 |||||||||| ||| ||||||| ||||||||||||| ||||| Sbjct: 38618 gtcgtagtcgtcggagttggagctctggtacagcgtcaggta 38577 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Minus Query: 233 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgca 292 |||||||||||| || ||||| | |||||||||| ||| ||| |||||||| |||||| Sbjct: 76275 gtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgccgca 76216 Query: 293 cgccgacgcgcccgacatgccgcaccgcgcgc 324 | | | | | |||| |||||||||| |||||| Sbjct: 76215 cacggtcacccccgccatgccgcactgcgcgc 76184 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 240 gcctccgtcaggtggatgccgtcccag 266 |||||||||||||||| |||||||||| Sbjct: 92066 gcctccgtcaggtggacgccgtcccag 92040 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 239 cgcctccgtcaggtggatgccgtcccagctc 269 |||||| || ||||||||||||||||||||| Sbjct: 53235 cgcctcggtgaggtggatgccgtcccagctc 53205 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 ||||||||||| |||||||| ||||||||| Sbjct: 127982 gccgcctccgtgaggtggatcccgtcccag 127953
>gb|AY107619.1| Zea mays PCO073125 mRNA sequence Length = 617 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 232 tgtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttg 287 ||||||| || || |||| |||||||||||||||||||| |||||||||||||| Sbjct: 265 tgtacgcagcttcggtcatgtggatgccgtcccagctcacgtacgacgacgggttg 210
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 332 gtagttgtacttgcccccgcccgcgccgcagcacgccct 370 ||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 89515 gtagttgtactcgccgccgccggcgccgcagcacgccct 89553
>dbj|AK106962.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-F07, full insert sequence Length = 1384 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 332 gtagttgtacttgcccccgcccgcgccgcagcacgccct 370 ||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 1061 gtagttgtactcgccgccgccggcgccgcagcacgccct 1023
>ref|NM_188455.1| Oryza sativa (japonica cultivar-group), Ozsa8150 predicted mRNA Length = 1149 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 ||||||||||||||||||| |||||||||| Sbjct: 1073 gccgcctccgtcaggtggacgccgtcccag 1044
>ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa8146 predicted mRNA Length = 1194 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 ||||||||||| |||||||||||||||||| Sbjct: 1067 gccgcctccgtgaggtggatgccgtcccag 1038
>ref|NM_188436.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 551 gtcgtagtcgccggcgttggaggtctggtacagcgtgaggta 592 |||||||||| ||| ||||||| ||||||||||||| ||||| Sbjct: 714 gtcgtagtcgtcggagttggagctctggtacagcgtcaggta 673
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 155 ctaggactaggactaggactaggaca 180 |||||||||||||||||||||||||| Sbjct: 940270 ctaggactaggactaggactaggaca 940295 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 940264 ctaggactaggactaggactaggac 940288
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 551 gtcgtagtcgccggcgttggaggtctggtacagcgtgaggta 592 |||||||||| ||| ||||||| ||||||||||||| ||||| Sbjct: 129750 gtcgtagtcgtcggagttggagctctggtacagcgtcaggta 129709 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Minus Query: 233 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgca 292 |||||||||||| || ||||| | |||||||||| ||| ||| |||||||| |||||| Sbjct: 167407 gtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgccgca 167348 Query: 293 cgccgacgcgcccgacatgccgcaccgcgcgc 324 | | | | | |||| |||||||||| |||||| Sbjct: 167347 cacggtcacccccgccatgccgcactgcgcgc 167316 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 239 cgcctccgtcaggtggatgccgtcccagctc 269 |||||| || ||||||||||||||||||||| Sbjct: 144367 cgcctcggtgaggtggatgccgtcccagctc 144337
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0506C10 Length = 150549 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 246 gtcaggtggatgccgtcccagctcagcgacgacgacgggttg 287 |||| |||||||||||||||||||| |||||||||||||| Sbjct: 384 gtcatgtggatgccgtcccagctcacgtacgacgacgggttg 425
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0410C01 Length = 138424 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 246 gtcaggtggatgccgtcccagctcagcgacgacgacgggttg 287 |||| |||||||||||||||||||| |||||||||||||| Sbjct: 137061 gtcatgtggatgccgtcccagctcacgtacgacgacgggttg 137102
>dbj|AK105422.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B12, full insert sequence Length = 1772 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 551 gtcgtagtcgccggcgttggaggtctggtacagcgtgaggta 592 |||||||||| ||| ||||||| ||||||||||||| ||||| Sbjct: 1147 gtcgtagtcgtcggagttggagctctggtacagcgtcaggta 1106
>dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-G04, full insert sequence Length = 1526 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 ||||||||||| |||||||||||||||||| Sbjct: 1137 gccgcctccgtgaggtggatgccgtcccag 1108
>dbj|AK103614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133K20, full insert sequence Length = 1416 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 551 gtcgtagtcgccggcgttggaggtctggtacagcgtgaggta 592 |||||||||| ||| ||||||| ||||||||||||| ||||| Sbjct: 791 gtcgtagtcgtcggagttggagctctggtacagcgtcaggta 750
>dbj|AK067909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123P18, full insert sequence Length = 1580 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 246 gtcaggtggatgccgtcccagctcagcgacgacgacgggttg 287 |||| |||||||||||||||||||| |||||||||||||| Sbjct: 1179 gtcatgtggatgccgtcccagctcacgtacgacgacgggttg 1138
>dbj|AK061422.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-F12, full insert sequence Length = 1323 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 246 gtcaggtggatgccgtcccagctcagcgacgacgacgggttg 287 |||| |||||||||||||||||||| |||||||||||||| Sbjct: 1175 gtcatgtggatgccgtcccagctcacgtacgacgacgggttg 1134
>dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E09, full insert sequence Length = 1531 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 ||||||||||| |||||||||||||||||| Sbjct: 1137 gccgcctccgtgaggtggatgccgtcccag 1108
>gb|AY108995.1| Zea mays PCO109727 mRNA sequence Length = 847 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 240 gcctccgtcaggtggatgccgtcccagctc 269 |||||||| ||||||||||||||||||||| Sbjct: 323 gcctccgtgaggtggatgccgtcccagctc 294
>gb|AY104407.1| Zea mays PCO114073 mRNA sequence Length = 1726 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 240 gcctccgtcaggtggatgccgtcccagctc 269 |||||||||||||| ||||||||||||||| Sbjct: 1315 gcctccgtcaggtgaatgccgtcccagctc 1286
>gb|AC116810.14| Mus musculus chromosome 1, clone RP24-355J5, complete sequence Length = 147130 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 80352 ctaggactaggactaggactaggac 80328 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 80346 ctaggactaggactaggactaggac 80322 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 80340 ctaggactaggactaggactaggac 80316 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 80334 ctaggactaggactaggactaggac 80310 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 80328 ctaggactaggactaggactaggac 80304 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 80169 ctaggactaggactaggactaggac 80145 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 80163 ctaggactaggactaggactaggac 80139 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 79977 ctaggactaggactaggactaggac 79953 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 79971 ctaggactaggactaggactaggac 79947 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 79965 ctaggactaggactaggactaggac 79941 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 79959 ctaggactaggactaggactaggac 79935 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 79953 ctaggactaggactaggactaggac 79929 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 79947 ctaggactaggactaggactaggac 79923 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 79941 ctaggactaggactaggactaggac 79917 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 156 taggactaggactaggactaggac 179 |||||||||||||||||||||||| Sbjct: 80072 taggactaggactaggactaggac 80049 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactagga 178 |||||||||||||||||||||||| Sbjct: 80067 ctaggactaggactaggactagga 80044 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 156 taggactaggactaggactaggac 179 |||||||||||||||||||||||| Sbjct: 79982 taggactaggactaggactaggac 79959 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 157 aggactaggactaggactaggac 179 ||||||||||||||||||||||| Sbjct: 80356 aggactaggactaggactaggac 80334 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactagg 177 ||||||||||||||||||||||| Sbjct: 80322 ctaggactaggactaggactagg 80300 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 157 aggactaggactaggactaggac 179 ||||||||||||||||||||||| Sbjct: 80173 aggactaggactaggactaggac 80151 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggacta 175 ||||||||||||||||||||| Sbjct: 80157 ctaggactaggactaggacta 80137 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggacta 175 ||||||||||||||||||||| Sbjct: 79935 ctaggactaggactaggacta 79915 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 taggactaggactaggactaggac 179 ||||| |||||||||||||||||| Sbjct: 80106 taggaataggactaggactaggac 80083 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 taggactaggactaggacta 175 |||||||||||||||||||| Sbjct: 80100 taggactaggactaggacta 80081 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 taggactaggactaggactaggac 179 ||||| |||||||||||||||||| Sbjct: 80078 taggaataggactaggactaggac 80055 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactagga 178 |||||||||||||||||| ||||| Sbjct: 80061 ctaggactaggactaggaatagga 80038
>emb|AL161712.5|CEY66D12A Caenorhabditis elegans YAC Y66D12A, complete sequence Length = 123149 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 57242 ctaggactaggactaggactaggac 57218 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactaggac 179 ||||||||||||||||||||||||| Sbjct: 57236 ctaggactaggactaggactaggac 57212 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 157 aggactaggactaggactaggac 179 ||||||||||||||||||||||| Sbjct: 57246 aggactaggactaggactaggac 57224 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactag 176 |||||||||||||||||||||| Sbjct: 57230 ctaggactaggactaggactag 57209
>ref|NM_188443.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1128 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Minus Query: 233 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgca 292 |||||||||||| || ||||| | |||||||||| ||| ||| |||||||| |||||| Sbjct: 1044 gtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgccgca 985 Query: 293 cgccgacgcgcccgacatgccgcaccgcgcgc 324 | | | | | |||| |||||||||| |||||| Sbjct: 984 cacggtcacccccgccatgccgcactgcgcgc 953
>gb|BT008971.1| Triticum aestivum clone wdk1c.pk023.m3:fis, full insert mRNA sequence Length = 1472 Score = 48.1 bits (24), Expect = 0.036 Identities = 42/48 (87%) Strand = Plus / Minus Query: 240 gcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttg 287 ||||| |||| |||||||||||||||||||| ||| |||||||||| Sbjct: 1106 gcctcggtcatgtggatgccgtcccagctcacgtacgccgacgggttg 1059
>gb|AC010906.10| Homo sapiens BAC clone RP11-566O4 from 2, complete sequence Length = 208571 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 156 taggactaggactaggactaggac 179 |||||||||||||||||||||||| Sbjct: 141672 taggactaggactaggactaggac 141649 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggact 174 |||||||||||||||||||| Sbjct: 141667 ctaggactaggactaggact 141648
>dbj|AK059318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H05, full insert sequence Length = 1622 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Minus Query: 233 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgca 292 |||||||||||| || ||||| | |||||||||| ||| ||| |||||||| |||||| Sbjct: 1226 gtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgccgca 1167 Query: 293 cgccgacgcgcccgacatgccgcaccgcgcgc 324 | | | | | |||| |||||||||| |||||| Sbjct: 1166 cacggtcacccccgccatgccgcactgcgcgc 1135
>ref|NM_188447.1| Oryza sativa (japonica cultivar-group), Ozsa8142 predicted mRNA Length = 1125 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 240 gcctccgtcaggtggatgccgtcccag 266 |||||||||||||||| |||||||||| Sbjct: 1061 gcctccgtcaggtggacgccgtcccag 1035
>ref|NM_188437.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1119 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 239 cgcctccgtcaggtggatgccgtcccagctc 269 |||||| || ||||||||||||||||||||| Sbjct: 1041 cgcctcggtgaggtggatgccgtcccagctc 1011
>ref|XM_476139.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Minus Query: 204 ccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtggatgccgtcc 263 ||||||| ||||||| |||||| | |||||| || ||||| || || |||||||||||| Sbjct: 1100 ccgttgagccagccgccggcgacgtacttgtatgcggcctcggtgagatggatgccgtcc 1041 Query: 264 cag 266 ||| Sbjct: 1040 cag 1038
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08, complete sequence Length = 94286 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Minus Query: 204 ccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtggatgccgtcc 263 ||||||| ||||||| |||||| | |||||| || ||||| || || |||||||||||| Sbjct: 61884 ccgttgagccagccgccggcgacgtacttgtatgcggcctcggtgagatggatgccgtcc 61825 Query: 264 cag 266 ||| Sbjct: 61824 cag 61822 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 239 cgcctccgtcaggtggatgccgtcccagct 268 |||||| || |||||||||||||||||||| Sbjct: 46189 cgcctcggtgaggtggatgccgtcccagct 46160
>emb|AL031709.12|HS316G12 Human DNA sequence from clone LA16c-316G12 on chromosome 16 Contains the gene for C2 domain protein KIAA0734, the gene for a novel protein similar to predicted yeast, worm and archae-bacterial proteins, a novel gene and the 3' part of the gene for a novel protein similar to API1 and API2 (apoptosis inhibitor 1 and 2 (MIHB, MIHC, IAP1, IAP2)). Contains ESTs, a GSS and six putative CpG islands, complete sequence Length = 37476 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 gatcctcccctcccctccccagc 110 ||||||||||||||||||||||| Sbjct: 35497 gatcctcccctcccctccccagc 35519
>gb|BT009193.1| Triticum aestivum clone wle1.pk0001.d6:fis, full insert mRNA sequence Length = 1342 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 240 gcctccgtcaggtggatgccgtcccag 266 |||||||||||||||| |||||||||| Sbjct: 1141 gcctccgtcaggtggacgccgtcccag 1115
>ref|XM_778266.1| PREDICTED: Strongylocentrotus purpuratus similar to huntingtin interacting protein B isoform 2 (LOC578079), mRNA Length = 9433 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 157 aggactaggactaggactaggac 179 ||||||||||||||||||||||| Sbjct: 3074 aggactaggactaggactaggac 3052 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggacta 175 ||||||||||||||||||||| Sbjct: 3070 ctaggactaggactaggacta 3050
>emb|AL807372.1|NCB23E9 Neurospora crassa DNA linkage group II BAC clone B23E9 Length = 64710 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 153 ctctaggactaggactaggacta 175 ||||||||||||||||||||||| Sbjct: 22739 ctctaggactaggactaggacta 22717
>gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8 Length = 279011 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 gatcctcccctcccctccccagc 110 ||||||||||||||||||||||| Sbjct: 37329 gatcctcccctcccctccccagc 37351
>gb|AC117377.9| Homo sapiens 12 BAC RP11-406H4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107100 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 155 ctaggactaggactaggactagg 177 ||||||||||||||||||||||| Sbjct: 45092 ctaggactaggactaggactagg 45070
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Minus Query: 204 ccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtggatgccgtcc 263 ||||||| ||||||| |||||| | |||||| || ||||| || || |||||||||||| Sbjct: 6757623 ccgttgagccagccgccggcgacgtacttgtatgcggcctcggtgagatggatgccgtcc 6757564 Query: 264 cag 266 ||| Sbjct: 6757563 cag 6757561 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 239 cgcctccgtcaggtggatgccgtcccagct 268 |||||| || |||||||||||||||||||| Sbjct: 6741928 cgcctcggtgaggtggatgccgtcccagct 6741899 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 428 gtagaagtcggcgtacatgatcttggcgtaggggtacttgc 468 ||||||||||||| | ||||||||||| | ||| ||||||| Sbjct: 24836878 gtagaagtcggcgaagatgatcttggcatggggatacttgc 24836918 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 428 gtagaagtcggcgtacatgatcttggcgtaggggtacttgc 468 ||||||||||||| | ||||||||||| | |||||||||| Sbjct: 24830204 gtagaagtcggcgaagatgatcttggcatgagggtacttgc 24830244 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 428 gtagaagtcggcgtacatgatcttggcgtaggggtacttgc 468 ||||||||||||| | ||||||||||| | |||||||||| Sbjct: 24822435 gtagaagtcggcgaagatgatcttggcatgagggtacttgc 24822475 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 23483066 cctcccctcccctccccagc 23483085 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gatcctcccctcccctcccc 107 |||||||||||||||||||| Sbjct: 10442955 gatcctcccctcccctcccc 10442974
>dbj|AK119642.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F10, full insert sequence Length = 1452 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 240 gcctccgtcaggtggatgccgtcccag 266 |||||||||||||||| |||||||||| Sbjct: 1124 gcctccgtcaggtggacgccgtcccag 1098
>dbj|AK119598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-E01, full insert sequence Length = 1520 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 240 gcctccgtcaggtggatgccgtcccag 266 |||||||||||||||| |||||||||| Sbjct: 1121 gcctccgtcaggtggacgccgtcccag 1095
>dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D10, full insert sequence Length = 1356 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 239 cgcctccgtcaggtggatgccgtcccagctc 269 |||||| || ||||||||||||||||||||| Sbjct: 965 cgcctcggtgaggtggatgccgtcccagctc 935
>dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E04, full insert sequence Length = 1583 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 239 cgcctccgtcaggtggatgccgtcccagctc 269 |||||| || ||||||||||||||||||||| Sbjct: 1193 cgcctcggtgaggtggatgccgtcccagctc 1163
>dbj|AK061118.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F05, full insert sequence Length = 1577 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 240 gcctccgtcaggtggatgccgtcccag 266 |||||||||||||||| |||||||||| Sbjct: 1124 gcctccgtcaggtggacgccgtcccag 1098
>dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F04, full insert sequence Length = 1356 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 239 cgcctccgtcaggtggatgccgtcccagctc 269 |||||| || ||||||||||||||||||||| Sbjct: 965 cgcctcggtgaggtggatgccgtcccagctc 935
>dbj|AK059088.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B07, full insert sequence Length = 1691 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 240 gcctccgtcaggtggatgccgtcccag 266 |||||||||||||||| |||||||||| Sbjct: 1384 gcctccgtcaggtggacgccgtcccag 1358
>gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228417 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 91 cctcccctcccctccccagcttc 113 ||||||||||||||||||||||| Sbjct: 174044 cctcccctcccctccccagcttc 174066
>gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complete sequence Length = 189521 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 91 cctcccctcccctccccagcttc 113 ||||||||||||||||||||||| Sbjct: 95801 cctcccctcccctccccagcttc 95779
>ref|NM_188454.1| Oryza sativa (japonica cultivar-group), Ozsa8149 predicted mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 ||||||||||| |||||||| ||||||||| Sbjct: 1055 gccgcctccgtgaggtggatcccgtcccag 1026
>ref|XM_476138.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1113 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 239 cgcctccgtcaggtggatgccgtcccagct 268 |||||| || |||||||||||||||||||| Sbjct: 1023 cgcctcggtgaggtggatgccgtcccagct 994
>ref|XM_466608.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 245 cgtcaggtggatgccgtcccagctca 270 ||||||||||| |||||||||||||| Sbjct: 1128 cgtcaggtggacgccgtcccagctca 1103
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 239 cgcctccgtcaggtggatgccgtcccagct 268 |||||| || |||||||||||||||||||| Sbjct: 113090 cgcctcggtgaggtggatgccgtcccagct 113061
>gb|AC105515.5| Rattus norvegicus 14 BAC CH230-13H11 (Children's Hospital Oakland Research Institute) complete sequence Length = 221805 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 gaaggaaaccgaggaacaaccc 138 |||||||||||||||||||||| Sbjct: 140745 gaaggaaaccgaggaacaaccc 140724
>emb|X74507.1|PSMDH P.sativum mdh mRNA for chloroplast malate dehydrogenase (NADP+) Length = 1326 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 ctctaggactaggactaggact 174 |||||||||||||||||||||| Sbjct: 72 ctctaggactaggactaggact 93
>gb|AY883461.1| Zea mays subsp. parviglumis cultivar HGW-Wilkes Site 6 teosinte glume architecture 1 (tga1) gene, promoter region Length = 1566 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 ctaggactaggactaggactag 176 |||||||||||||||||||||| Sbjct: 1528 ctaggactaggactaggactag 1549
>gb|AY883460.1| Zea mays subsp. parviglumis cultivar BFB-Benz 967 teosinte glume architecture 1 (tga1) gene, promoter region Length = 1266 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 ctaggactaggactaggactag 176 |||||||||||||||||||||| Sbjct: 1228 ctaggactaggactaggactag 1249
>gb|AY883459.1| Zea mays subsp. parviglumis cultivar TAK-Kato Site 4 teosinte glume architecture 1 (tga1) gene, promoter region Length = 1374 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 ctaggactaggactaggactag 176 |||||||||||||||||||||| Sbjct: 1336 ctaggactaggactaggactag 1357
>gb|AY883452.1| Zea mays subsp. parviglumis cultivar GWB-Beadle&Kato Site 4 teosinte glume architecture 1 (tga1) gene, promoter region Length = 1254 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 ctaggactaggactaggactag 176 |||||||||||||||||||||| Sbjct: 1216 ctaggactaggactaggactag 1237
>gb|AC107403.6| Drosophila melanogaster X BAC RP98-21M21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181831 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 155 ctaggactaggactaggactaggaca 180 ||||||||||||||||||| |||||| Sbjct: 97739 ctaggactaggactaggacgaggaca 97764 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 actaggactaggactaggac 179 |||||||||||||||||||| Sbjct: 97738 actaggactaggactaggac 97757
>gb|AC105421.2| Homo sapiens BAC clone RP11-695A18 from 4, complete sequence Length = 162793 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 atcctcccctcccctccccagc 110 |||||||||||||||||||||| Sbjct: 119359 atcctcccctcccctccccagc 119338
>dbj|AP004280.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0648E08 Length = 135175 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 aggactaggactaggactagga 178 |||||||||||||||||||||| Sbjct: 55947 aggactaggactaggactagga 55926
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 aggactaggactaggactagga 178 |||||||||||||||||||||| Sbjct: 143142 aggactaggactaggactagga 143121
>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1669_F01 Length = 140019 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 245 cgtcaggtggatgccgtcccagctca 270 ||||||||||| |||||||||||||| Sbjct: 123205 cgtcaggtggacgccgtcccagctca 123230
>dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D08, full insert sequence Length = 1551 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 239 cgcctccgtcaggtggatgccgtcccagct 268 |||||| || |||||||||||||||||||| Sbjct: 1113 cgcctcggtgaggtggatgccgtcccagct 1084
>dbj|AK107557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B05, full insert sequence Length = 1723 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 237 gccgcctccgtcaggtggatgccgtcccag 266 ||||||||||| |||||||| ||||||||| Sbjct: 1284 gccgcctccgtgaggtggatcccgtcccag 1255
>gb|AE003429.4| Drosophila melanogaster chromosome X, section 13 of 74 of the complete sequence Length = 326403 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 155 ctaggactaggactaggactaggaca 180 ||||||||||||||||||| |||||| Sbjct: 258293 ctaggactaggactaggacgaggaca 258318 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 actaggactaggactaggac 179 |||||||||||||||||||| Sbjct: 258292 actaggactaggactaggac 258311
>emb|AL929233.9| Mouse DNA sequence from clone RP23-388H13 on chromosome 2, complete sequence Length = 133534 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 82 aatggtgatcctcccctcccctcccc 107 |||||||| ||||||||||||||||| Sbjct: 116476 aatggtgaccctcccctcccctcccc 116451
>ref|NM_112144.2| Arabidopsis thaliana unknown protein AT3G13062 transcript variant AT3G13062.1 mRNA, complete cds Length = 1709 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 ggactaggactaggactagga 178 ||||||||||||||||||||| Sbjct: 114 ggactaggactaggactagga 94
>ref|NM_180243.2| Arabidopsis thaliana unknown protein AT3G13062 transcript variant AT3G13062.3 mRNA, complete cds Length = 1733 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 ggactaggactaggactagga 178 ||||||||||||||||||||| Sbjct: 114 ggactaggactaggactagga 94
>ref|NM_180242.2| Arabidopsis thaliana unknown protein AT3G13062 transcript variant AT3G13062.2 mRNA, complete cds Length = 1716 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 ggactaggactaggactagga 178 ||||||||||||||||||||| Sbjct: 114 ggactaggactaggactagga 94
>gb|AC152753.1| Mus musculus chromosome 17 clone RP23-65L9, complete sequence Length = 211853 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 atcctcccctcccctccccag 109 ||||||||||||||||||||| Sbjct: 153086 atcctcccctcccctccccag 153106
>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01, complete sequence Length = 118799 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 428 gtagaagtcggcgtacatgatcttggcgtaggggtacttgc 468 ||||||||||||| | ||||||||||| | |||||||||| Sbjct: 112187 gtagaagtcggcgaagatgatcttggcatgagggtacttgc 112227 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 428 gtagaagtcggcgtacatgatcttggcgtaggggtacttgc 468 ||||||||||||| | ||||||||||| | |||||||||| Sbjct: 104418 gtagaagtcggcgaagatgatcttggcatgagggtacttgc 104458
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 428 gtagaagtcggcgtacatgatcttggcgtaggggtacttgc 468 ||||||||||||| | ||||||||||| | ||| ||||||| Sbjct: 23763 gtagaagtcggcgaagatgatcttggcatggggatacttgc 23803 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 428 gtagaagtcggcgtacatgatcttggcgtaggggtacttgc 468 ||||||||||||| | ||||||||||| | |||||||||| Sbjct: 17089 gtagaagtcggcgaagatgatcttggcatgagggtacttgc 17129 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 428 gtagaagtcggcgtacatgatcttggcgtaggggtacttgc 468 ||||||||||||| | ||||||||||| | |||||||||| Sbjct: 9320 gtagaagtcggcgaagatgatcttggcatgagggtacttgc 9360
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 tcctcccctcccctccccagc 110 ||||||||||||||||||||| Sbjct: 4510224 tcctcccctcccctccccagc 4510204
>gb|AC124748.5| Mus musculus BAC clone RP23-261I7 from chromosome 17, complete sequence Length = 184968 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 atcctcccctcccctccccag 109 ||||||||||||||||||||| Sbjct: 71458 atcctcccctcccctccccag 71478
>gb|AC121919.3| Mus musculus BAC clone RP24-195I15 from chromosome 14, complete sequence Length = 146974 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 aggactaggactaggactagg 177 ||||||||||||||||||||| Sbjct: 7429 aggactaggactaggactagg 7449
>gb|AC110157.7| Mus musculus chromosome 14, clone RP23-151K23, complete sequence Length = 243114 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 atcctcccctcccctccccagcttc 113 |||||||||||||| |||||||||| Sbjct: 59775 atcctcccctccccaccccagcttc 59751
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 550 ggtcgtagtcgccggcgttggaggtctgg 578 |||||||||||||| ||||||||| |||| Sbjct: 56078 ggtcgtagtcgccgccgttggagggctgg 56050
>gb|AC106899.5| Homo sapiens BAC clone RP11-734N2 from 2, complete sequence Length = 132562 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 tgatcctcccctcccctcccc 107 ||||||||||||||||||||| Sbjct: 3304 tgatcctcccctcccctcccc 3324
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 tcctcccctcccctccccagc 110 ||||||||||||||||||||| Sbjct: 4510339 tcctcccctcccctccccagc 4510319
>emb|BX823851.1|CNS0A7G7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS83ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1562 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 ggactaggactaggactagga 178 ||||||||||||||||||||| Sbjct: 50 ggactaggactaggactagga 30
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 tcctcccctcccctccccagc 110 ||||||||||||||||||||| Sbjct: 115516 tcctcccctcccctccccagc 115496
>gb|AF323755.2| Rhodococcus sp. NCIMB 9784 camphor-degrading gene cluster, partial sequence Length = 9976 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 218 gtcggcgatcttcttgtacgccgcctccg 246 |||||||||||||| ||||||| |||||| Sbjct: 1008 gtcggcgatcttctggtacgcctcctccg 1036
>gb|AC154745.3| Mus musculus BAC clone RP24-395F6 from chromosome 13, complete sequence Length = 144172 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 tgatcctcccctcccctcccc 107 ||||||||||||||||||||| Sbjct: 12167 tgatcctcccctcccctcccc 12187
>dbj|AB026645.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGH6 Length = 81020 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 ggactaggactaggactagga 178 ||||||||||||||||||||| Sbjct: 75068 ggactaggactaggactagga 75048
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 619 ccccggggatgacgatgtacatggc 643 |||||| |||||||||||||||||| Sbjct: 794834 ccccggcgatgacgatgtacatggc 794858
>gb|AC004052.1|AC004052 Homo sapiens chromosome 4 clone B209B10 map 4q25, complete sequence Length = 156490 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 tagtaaataaaaataatggtg 88 ||||||||||||||||||||| Sbjct: 31388 tagtaaataaaaataatggtg 31408
>emb|CT025551.9| Mouse DNA sequence from clone RP23-414I10 on chromosome 13, complete sequence Length = 196737 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 tgatcctcccctcccctcccc 107 ||||||||||||||||||||| Sbjct: 22016 tgatcctcccctcccctcccc 22036
>gb|AC169502.1| Mus musculus BAC clone RP24-409G12 from chromosome 9, complete sequence Length = 146217 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atcctcccctcccctcccca 108 |||||||||||||||||||| Sbjct: 35131 atcctcccctcccctcccca 35112 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atcctcccctcccctcccca 108 |||||||||||||||||||| Sbjct: 23207 atcctcccctcccctcccca 23188
>gb|AC137609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0010H19, complete sequence Length = 162902 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gatcctcccctcccctcccc 107 |||||||||||||||||||| Sbjct: 125988 gatcctcccctcccctcccc 126007
>gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, complete sequence Length = 186659 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atcctcccctcccctcccca 108 |||||||||||||||||||| Sbjct: 56878 atcctcccctcccctcccca 56897
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 1138576 cctcccctcccctccccagc 1138557
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 4286 cctcccctcccctccccagc 4267
>gb|AC137745.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0041J18, complete sequence Length = 129523 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ccgcgccgcagcacgccctc 371 |||||||||||||||||||| Sbjct: 18490 ccgcgccgcagcacgccctc 18509
>gb|AC137003.3| Oryza sativa (japonica cultivar-group) Chromosome 5 BAC clone OSJNBb0069G11, complete sequence Length = 174844 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gatcctcccctcccctcccc 107 |||||||||||||||||||| Sbjct: 59771 gatcctcccctcccctcccc 59790
>gb|AC008201.8| Drosophila melanogaster clone BACR11E07, complete sequence Length = 190153 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 537 aggcacccgtactggtcgtagtcg 560 ||||||||| |||||||||||||| Sbjct: 133999 aggcacccgaactggtcgtagtcg 134022
>ref|XM_368522.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00722.4) partial mRNA Length = 2967 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 560 gccggcgttggaggtctggtacag 583 |||||||||||||||| ||||||| Sbjct: 696 gccggcgttggaggtcaggtacag 673
>gb|AC138401.9| Mus musculus chromosome 13, clone RP24-79G5, complete sequence Length = 209942 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gatcctcccctcccctcccc 107 |||||||||||||||||||| Sbjct: 128557 gatcctcccctcccctcccc 128538
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ccgcgccgcagcacgccctc 371 |||||||||||||||||||| Sbjct: 131319 ccgcgccgcagcacgccctc 131338
>gb|AC146187.2| Pan troglodytes BAC clone RP43-25A10 from 7, complete sequence Length = 156796 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 79164 cctcccctcccctccccagc 79145
>gb|DQ371286.1| Culicoides flavipulicaris haplotype Fla03 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2a, 2S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 369 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tagtaaataaaaataatggt 87 |||||||||||||||||||| Sbjct: 291 tagtaaataaaaataatggt 272
>gb|DQ371285.1| Culicoides flavipulicaris haplotype Fla02 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2a, 2S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 368 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tagtaaataaaaataatggt 87 |||||||||||||||||||| Sbjct: 291 tagtaaataaaaataatggt 272
>gb|DQ371284.1| Culicoides flavipulicaris haplotype Fla01 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2a, 2S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 368 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tagtaaataaaaataatggt 87 |||||||||||||||||||| Sbjct: 291 tagtaaataaaaataatggt 272
>gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, complete sequence Length = 168986 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atcctcccctcccctcccca 108 |||||||||||||||||||| Sbjct: 74802 atcctcccctcccctcccca 74821
>gb|AC162916.3| Mus musculus BAC clone RP23-395G18 from chromosome 1, complete sequence Length = 224904 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 157781 cctcccctcccctccccagc 157762
>gb|AC161246.2| Mus musculus BAC clone RP24-421E18 from chromosome 9, complete sequence Length = 201524 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tcctcccctcccctccccag 109 |||||||||||||||||||| Sbjct: 170741 tcctcccctcccctccccag 170760
>gb|AC138208.11| Mus musculus chromosome 1, clone RP23-304E4, complete sequence Length = 166332 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 41073 cctcccctcccctccccagc 41054
>gb|AC125141.4| Mus musculus BAC clone RP24-333C3 from chromosome 17, complete sequence Length = 148447 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 74216 cctcccctcccctccccagc 74197
>gb|AC004691.1| Homo sapiens PAC clone RP4-740D2 from 7, complete sequence Length = 141990 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 125887 cctcccctcccctccccagc 125906
>gb|AC135188.2| Mus musculus BAC clone RP23-206P4 from chromosome 14, complete sequence Length = 182464 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tcctcccctcccctccccag 109 |||||||||||||||||||| Sbjct: 89358 tcctcccctcccctccccag 89377
>emb|CT009546.4| Mouse DNA sequence from clone RP23-111H19 on chromosome 13, complete sequence Length = 207769 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 ggactaggactaggactagg 177 |||||||||||||||||||| Sbjct: 27853 ggactaggactaggactagg 27872
>gb|AC122525.4| Mus musculus BAC clone RP24-496O17 from chromosome 9, complete sequence Length = 196461 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 atcctcccctcccctccccagctt 112 ||||| |||||||||||||||||| Sbjct: 114040 atccttccctcccctccccagctt 114017
>emb|AJ843249.1| Physcomitrella patens mRNA for GDSL-like lipase precursor (gdslll gene) Length = 1752 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 gtggatgccgtcccagctca 270 |||||||||||||||||||| Sbjct: 1239 gtggatgccgtcccagctca 1220
>gb|AC104920.10| Mus musculus chromosome 10, clone RP23-360H23, complete sequence Length = 212273 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 gactaggactaggactagga 178 |||||||||||||||||||| Sbjct: 108793 gactaggactaggactagga 108812
>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence Length = 255062 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 tcctcccctcccctccccagcttc 113 |||||||||||||||||| ||||| Sbjct: 136673 tcctcccctcccctcccctgcttc 136650
>gb|AC107715.5| Mus musculus chromosome 10, clone RP24-376I19, complete sequence Length = 156153 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ctcccctcccctccccagct 111 |||||||||||||||||||| Sbjct: 8434 ctcccctcccctccccagct 8415
>gb|AC157809.4| Mus musculus chromosome 1, clone RP24-375B12, complete sequence Length = 138350 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 72135 cctcccctcccctccccagc 72154
>emb|AL512658.12| Human DNA sequence from clone RP11-518I13 on chromosome 6 Contains a novel gene and a CpG island, complete sequence Length = 173103 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 tcctcccctcccctccccagcttc 113 ||||||||||||||||||| |||| Sbjct: 104505 tcctcccctcccctccccatcttc 104528
>emb|AL451063.4| Human DNA sequence from clone RP11-267N12 on chromosome 1 Contains the 5' end of the RGS5 gene for regulator of G-protein signalling 5, the 3' ends of two novel genes and a CCA-adding tRNA nucleotidyl transferase 1 (TRNT1) pseudogene, complete sequence Length = 66608 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 33300 cctcccctcccctccccagc 33319
>gb|AC025853.17| Homo sapiens chromosome 8, clone RP11-353K12, complete sequence Length = 173681 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cccctcccctccccagcttc 113 |||||||||||||||||||| Sbjct: 79702 cccctcccctccccagcttc 79683
>emb|AL121827.34|HSA261N11 Human DNA sequence from clone RP11-261N11 on chromosome 20, complete sequence Length = 184223 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 agctggcggggctcttgacc 410 |||||||||||||||||||| Sbjct: 54835 agctggcggggctcttgacc 54816
>gb|BT023796.1| Drosophila melanogaster AT30049 full insert cDNA Length = 3235 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 537 aggcacccgtactggtcgtagtcg 560 ||||||||| |||||||||||||| Sbjct: 2614 aggcacccgaactggtcgtagtcg 2591
>emb|AL669869.10| Mouse DNA sequence from clone RP23-198E14 on chromosome 11 Contains the 3' end of the Mgl2 gene for macrophage galactose N-acetyl-galactosamine specific lectin 2, the Mgl1 gene for macrophage galactose N-acetyl-galactosamine specific lectin 1, the gene for a novel RNA polymerase Rpb1 C-terminal repeat domain containing protein, three novel genes, the Bcl6b gene for B-cell CLL/lymphoma 6 member B, the Alox12 gene for arachidonate 12-lipoxygenase and four CpG islands, complete sequence Length = 174390 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gatcctcccctcccctcccc 107 |||||||||||||||||||| Sbjct: 98173 gatcctcccctcccctcccc 98154
>emb|CR933731.5| Mouse DNA sequence from clone DN-160I24 on chromosome 11, complete sequence Length = 212982 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gatcctcccctcccctcccc 107 |||||||||||||||||||| Sbjct: 78195 gatcctcccctcccctcccc 78176
>dbj|AK123873.1| Homo sapiens cDNA FLJ41879 fis, clone OCBBF2020741 Length = 3334 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 agctggcggggctcttgacc 410 |||||||||||||||||||| Sbjct: 1859 agctggcggggctcttgacc 1840
>ref|NM_142931.3| Drosophila melanogaster CG10192-RA (CG10192), mRNA Length = 7120 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 537 aggcacccgtactggtcgtagtcg 560 ||||||||| |||||||||||||| Sbjct: 2614 aggcacccgaactggtcgtagtcg 2591
>gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosome unknown, complete sequence Length = 212960 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tattcttgcaacacatcacc 31 |||||||||||||||||||| Sbjct: 66982 tattcttgcaacacatcacc 67001
>gb|AC158602.6| Mus musculus 10 BAC RP23-136G23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182817 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ctcccctcccctccccagct 111 |||||||||||||||||||| Sbjct: 110843 ctcccctcccctccccagct 110824
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ccgcgccgcagcacgccctc 371 |||||||||||||||||||| Sbjct: 16490720 ccgcgccgcagcacgccctc 16490739
>gb|AC126943.5| Mus musculus BAC clone RP23-307F3 from chromosome 10, complete sequence Length = 192356 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tcctcccctcccctccccag 109 |||||||||||||||||||| Sbjct: 122068 tcctcccctcccctccccag 122087
>gb|AC146604.5| Mus musculus BAC clone RP23-306G1 from chromosome 13, complete sequence Length = 213725 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tagtaaataaaaataatggt 87 |||||||||||||||||||| Sbjct: 201445 tagtaaataaaaataatggt 201426
>gb|AC099860.13| Mus musculus chromosome 1, clone RP23-5C23, complete sequence Length = 230538 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 atcctcccctcccctccccagctt 112 ||||||||||||||||||| |||| Sbjct: 186672 atcctcccctcccctcccctgctt 186649
>gb|AC131157.4| Homo sapiens 12 BAC RP11-70F11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180907 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 34478 cctcccctcccctccccagc 34459
>gb|AF130418.3|AF130418 Homo sapiens chromosome 21q21 PCY PAC2N gi 5430716 containing marker STS SHGC-8183, complete sequence Length = 104835 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tagtaaataaaaataatggt 87 |||||||||||||||||||| Sbjct: 94774 tagtaaataaaaataatggt 94755
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 491 ctggagcagcgagttgtggcggga 514 ||||||||||||||||||| |||| Sbjct: 85992 ctggagcagcgagttgtggtggga 86015
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 491 ctggagcagcgagttgtggcggga 514 ||||||||||||||||||| |||| Sbjct: 15901 ctggagcagcgagttgtggtggga 15924
>gb|AC117695.15| Mus musculus chromosome 1, clone RP23-450I19, complete sequence Length = 188171 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 45155 cctcccctcccctccccagc 45174
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 1395 cctcccctcccctccccagc 1376
>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0020P04 Length = 153894 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gatcctcccctcccctcccc 107 |||||||||||||||||||| Sbjct: 86651 gatcctcccctcccctcccc 86670
>dbj|BS000032.1| Pan troglodytes chromosome 22 clone:RP43-047I19, map 22, complete sequences Length = 166625 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tagtaaataaaaataatggt 87 |||||||||||||||||||| Sbjct: 106784 tagtaaataaaaataatggt 106765
>emb|BX640402.2| Chicken DNA sequence from clone WAG-10A12, complete sequence Length = 131863 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 agatggggaagcagcccacg 611 |||||||||||||||||||| Sbjct: 34403 agatggggaagcagcccacg 34422
>dbj|AK107015.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-G02, full insert sequence Length = 2228 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 491 ctggagcagcgagttgtggcggga 514 ||||||||||||||||||| |||| Sbjct: 1586 ctggagcagcgagttgtggtggga 1609
>dbj|AK102461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094D02, full insert sequence Length = 2454 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 175 cctcccctcccctccccagc 156
>dbj|AK102384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092C19, full insert sequence Length = 1623 Score = 40.1 bits (20), Expect = 8.9 Identities = 74/92 (80%) Strand = Plus / Minus Query: 233 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggttgccgca 292 |||||||||||| || ||||| | |||||||||| ||| || |||||||| |||||| Sbjct: 1227 gtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacaccgacgggtcgccgca 1168 Query: 293 cgccgacgcgcccgacatgccgcaccgcgcgc 324 | | | | | |||| |||||||||| |||||| Sbjct: 1167 cacggtcacccccgccatgccgcactgcgcgc 1136
>gb|AC136371.4| Mus musculus chromosome 1, clone RP23-405G16, complete sequence Length = 225976 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 44178 cctcccctcccctccccagc 44159
>gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83 of 118 of the complete sequence Length = 230236 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 537 aggcacccgtactggtcgtagtcg 560 ||||||||| |||||||||||||| Sbjct: 12972 aggcacccgaactggtcgtagtcg 12995
>dbj|AP000439.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-44E22, complete sequence Length = 105962 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cccctcccctccccagcttc 113 |||||||||||||||||||| Sbjct: 10746 cccctcccctccccagcttc 10727
>dbj|AP001669.1| Homo sapiens genomic DNA, chromosome 21q, section 13/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tagtaaataaaaataatggt 87 |||||||||||||||||||| Sbjct: 68182 tagtaaataaaaataatggt 68163
>dbj|AP003965.2| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-31O9, complete sequence Length = 121852 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cccctcccctccccagcttc 113 |||||||||||||||||||| Sbjct: 80614 cccctcccctccccagcttc 80595
>emb|BX510358.4| Mouse DNA sequence from clone RP23-78G10 on chromosome X, complete sequence Length = 60208 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 12518 cctcccctcccctccccagc 12499
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gccgcacgccgacgcgcccg 306 |||||||||||||||||||| Sbjct: 2140766 gccgcacgccgacgcgcccg 2140747
>gb|AC162298.4| Mus musculus chromosome 1, clone RP24-285P15, complete sequence Length = 138146 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 atcctcccctcccctccccagctt 112 ||||||||||||||||||| |||| Sbjct: 17301 atcctcccctcccctcccctgctt 17278
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ccgcgccgcagcacgccctc 371 |||||||||||||||||||| Sbjct: 16581725 ccgcgccgcagcacgccctc 16581744
>emb|AL935121.9| Mouse DNA sequence from clone RP23-432M14 on chromosome 2, complete sequence Length = 106940 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 96090 cctcccctcccctccccagc 96109
>gb|AC139382.3| Mus musculus BAC clone RP23-30B24 from 12, complete sequence Length = 180698 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 158199 cctcccctcccctccccagc 158218
>gb|AC134608.3| Mus musculus BAC clone RP23-68H13 from 13, complete sequence Length = 253539 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tagtaaataaaaataatggt 87 |||||||||||||||||||| Sbjct: 140268 tagtaaataaaaataatggt 140249
>dbj|AP005233.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-211G23, complete sequence Length = 157200 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cccctcccctccccagcttc 113 |||||||||||||||||||| Sbjct: 103608 cccctcccctccccagcttc 103589
>gb|DQ279079.1| Chlamydomonas reinhardtii PhoA (PHOA) mRNA, complete cds; nuclear gene for plastid product Length = 2619 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 ggtcgtagtcgccggcgttg 569 |||||||||||||||||||| Sbjct: 889 ggtcgtagtcgccggcgttg 870
>gb|AC171198.1| Mus musculus BAC clone RP23-251J18 from chromosome 9, complete sequence Length = 178608 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atcctcccctcccctcccca 108 |||||||||||||||||||| Sbjct: 135300 atcctcccctcccctcccca 135281 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atcctcccctcccctcccca 108 |||||||||||||||||||| Sbjct: 123377 atcctcccctcccctcccca 123358
>gb|AC171200.1| Mus musculus BAC clone RP24-423F5 from chromosome 13, complete sequence Length = 170621 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 ggactaggactaggactagg 177 |||||||||||||||||||| Sbjct: 161316 ggactaggactaggactagg 161335
>emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chromosome 2, complete sequence Length = 142263 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aggaaggaaaccgaggaaca 134 |||||||||||||||||||| Sbjct: 18532 aggaaggaaaccgaggaaca 18551
>emb|AL669975.9| Mouse DNA sequence from clone RP23-218H24 on chromosome X, complete sequence Length = 230634 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ctcccctcccctccccagct 111 |||||||||||||||||||| Sbjct: 77902 ctcccctcccctccccagct 77921
>emb|AL671923.15| Mouse DNA sequence from clone RP23-322C16 on chromosome X, complete sequence Length = 213730 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gatcctcccctcccctcccc 107 |||||||||||||||||||| Sbjct: 5411 gatcctcccctcccctcccc 5392
>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0095J22, complete sequence Length = 151730 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cctcccctcccctccccagc 110 |||||||||||||||||||| Sbjct: 18790 cctcccctcccctccccagc 18809
>emb|X53538.1|HMRDNAS Herdmania momus rDNA for 18S, 5.8S and 26S ribosomal RNA Length = 7967 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gcacgccgacgcgcccgaca 309 |||||||||||||||||||| Sbjct: 7921 gcacgccgacgcgcccgaca 7902 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,870,517 Number of Sequences: 3902068 Number of extensions: 4870517 Number of successful extensions: 186476 Number of sequences better than 10.0: 188 Number of HSP's better than 10.0 without gapping: 191 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 184491 Number of HSP's gapped (non-prelim): 1948 length of query: 651 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 628 effective length of database: 17,143,297,704 effective search space: 10765990958112 effective search space used: 10765990958112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
