ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18g01 |
|---|---|
| Clone Library Name | barley_pub |
>FOX2_NEUCR (Q01373) Peroxisomal hydratase-dehydrogenase-epimerase (HDE)| (Multifunctional beta-oxidation protein) (MFP) [Includes: 2-enoyl-CoA hydratase (EC 4.2.1.-); D-3-hydroxyacyl CoA dehydrogenase (EC 1.1.1.-)] Length = 894 Score = 152 bits (384), Expect = 1e-36 Identities = 86/194 (44%), Positives = 112/194 (57%) Frame = -3 Query: 720 PIXSCASVVNKVKVAGLHDKGKATILEIETTTSLKDSGEVLCMNRSTIFLRGAGGFSDSS 541 PI + +V+K K+ + DKG A I++ TT ++GE L N T+FLRG GGF Sbjct: 704 PIPTSGRLVSKGKLLEVVDKGSAAIVKQGITTFNAETGEELFYNEMTVFLRGCGGFGGQK 763 Query: 540 RPYSYTTYPANQISRISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVAGF 361 +P A P +P AV E QT + QA +YRLSGDYNPLH DP A+V GF Sbjct: 764 KPADRGASTAAN----KPPARSPDAVVEVQTTEEQAAIYRLSGDYNPLHVDPAFAKVGGF 819 Query: 360 ARPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQY 181 PILHGLC+ G A +AV + + +NI RF V PG+TLVTEMW +G +V + Sbjct: 820 KVPILHGLCSFGIAGKAVYEKY-----GKFKNIKVRFAGTVNPGQTLVTEMWKEGNKVVF 874 Query: 180 QTKAKERDRAVLSG 139 QTK KE + +SG Sbjct: 875 QTKVKETGKLAISG 888
>DHB4_HUMAN (P51659) Peroxisomal multifunctional enzyme type 2 (MFE-2)| (D-bifunctional protein) (DBP) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) [Includes: D-3-hydroxyacyl-CoA dehydratase (EC 4.2.1.107) (3-alpha,7-alpha,12-alpha-trihydroxy-5 Length = 735 Score = 152 bits (383), Expect = 1e-36 Identities = 80/195 (41%), Positives = 114/195 (58%) Frame = -3 Query: 726 YKPIXSCASVVNKVKVAGLHDKGKATILEIETTTSLKDSGEVLCMNRSTIFLRGAGGFSD 547 YKP+ + + VA + DKG ++ ++ + + E++C N+ ++FL G+GGF Sbjct: 413 YKPLPRAGKLKCEAVVADVLDKGSGVVIIMDVYSYSEK--ELICHNQFSLFLVGSGGFGG 470 Query: 546 SSRPYSYTTYPANQISRISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVA 367 ++IPN P AV D T +QA LYRLSGD+NPLH DP A +A Sbjct: 471 KRTSDKVKV-------AVAIPNRPPDAVLTDTTSLNQAALYRLSGDWNPLHIDPNFASLA 523 Query: 366 GFARPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRV 187 GF +PILHGLCT GF+AR V++ F + D + + I RF VYPG+TL TEMW +G R+ Sbjct: 524 GFDKPILHGLCTFGFSARRVLQQFADNDVSRFKAIKARFAKPVYPGQTLQTEMWKEGNRI 583 Query: 186 QYQTKAKERDRAVLS 142 +QTK +E V+S Sbjct: 584 HFQTKVQETGDIVIS 598
>DHB4_MOUSE (P51660) Peroxisomal multifunctional enzyme type 2 (MFE-2)| (D-bifunctional protein) (DBP) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) [Includes: D-3-hydroxyacyl-CoA dehydratase (EC 4.2.1.107) (3-alpha,7-alpha,12-alpha-trihydroxy-5 Length = 734 Score = 151 bits (382), Expect = 2e-36 Identities = 78/195 (40%), Positives = 113/195 (57%) Frame = -3 Query: 726 YKPIXSCASVVNKVKVAGLHDKGKATILEIETTTSLKDSGEVLCMNRSTIFLRGAGGFSD 547 YKP+ + + +A + DKG ++ ++ + E++C N+ ++F+ G+GGF Sbjct: 412 YKPLPRSGELKCEAVIADILDKGSGVVIVMDVYSY--SGKELICYNQFSVFVVGSGGFGG 469 Query: 546 SSRPYSYTTYPANQISRISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVA 367 + +++PN P AV D T +QA LYRLSGD+NPLH DP A VA Sbjct: 470 KRTSEKLK-------AAVAVPNRPPDAVLRDATSLNQAALYRLSGDWNPLHIDPDFASVA 522 Query: 366 GFARPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRV 187 GF +PILHGLCT GF+AR V++ F + D + + I RF VYPG+TL TEMW +G R+ Sbjct: 523 GFEKPILHGLCTFGFSARHVLQQFADNDVSRFKAIKVRFAKPVYPGQTLQTEMWKEGNRI 582 Query: 186 QYQTKAKERDRAVLS 142 +QTK E V+S Sbjct: 583 HFQTKVHETGDVVIS 597
>DHB4_RAT (P97852) Peroxisomal multifunctional enzyme type 2 (MFE-2)| (D-bifunctional protein) (DBP) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) [Includes: D-3-hydroxyacyl-CoA dehydratase (EC 4.2.1.107) (3-alpha,7-alpha,12-alpha-trihydroxy-5-b Length = 734 Score = 148 bits (374), Expect = 1e-35 Identities = 76/195 (38%), Positives = 113/195 (57%) Frame = -3 Query: 726 YKPIXSCASVVNKVKVAGLHDKGKATILEIETTTSLKDSGEVLCMNRSTIFLRGAGGFSD 547 YKP+ + + +A + DKG ++ ++ + E++C N+ ++F+ G+GGF Sbjct: 412 YKPLPRSGELKCEAVIADILDKGSGIVIVMDVYSY--SGKELICYNQFSVFVVGSGGFGG 469 Query: 546 SSRPYSYTTYPANQISRISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVA 367 + +++P+ P AV D T +QA LYRLSGD NPLH DP A +A Sbjct: 470 KRTSEKLK-------AAVAVPSRPPDAVLRDTTSLNQAALYRLSGDSNPLHIDPSFASIA 522 Query: 366 GFARPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRV 187 GF +PILHGLCT GF+AR V++ F + D + + I RF VYPG+TL TEMW +G R+ Sbjct: 523 GFEKPILHGLCTFGFSARHVLQQFADNDVSRFKAIKVRFAKPVYPGQTLQTEMWKEGNRI 582 Query: 186 QYQTKAKERDRAVLS 142 +QTK +E V+S Sbjct: 583 HFQTKVQETGDIVIS 597
>FOX2_YEAST (Q02207) Peroxisomal hydratase-dehydrogenase-epimerase (HDE)| (Multifunctional beta-oxidation protein) (MFP) [Includes: 2-enoyl-CoA hydratase (EC 4.2.1.-); D-3-hydroxyacyl CoA dehydrogenase (EC 1.1.1.-)] Length = 900 Score = 89.4 bits (220), Expect = 1e-17 Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 1/191 (0%) Frame = -3 Query: 672 LHDKGKATILEIETTTSLKDSGEVLCMNRSTIFLRGAGGFSDSSRPYSYTTYPANQISRI 493 L GKA ++ T + +++ N + F+RGA + + Sbjct: 717 LDKNGKAALVVGGFETYDIKTKKLIAYNEGSFFIRGA--HVPPEKEVRDGKRAKFAVQNF 774 Query: 492 SIPNS-APSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAA 316 +P+ P E T + QA LYRLSGD+NPLH DP +A+ F PILHGLCTLG +A Sbjct: 775 EVPHGKVPDFEAEISTNKDQAALYRLSGDFNPLHIDPTLAKAVKFPTPILHGLCTLGISA 834 Query: 315 RAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAVLSGY 136 +A+ + + + + RF V+PG+TL + W G V +QT R+ VL Sbjct: 835 KALFEHY-----GPYEELKVRFTNVVFPGDTLKVKAWKQGSVVVFQTIDTTRNVIVLDNA 889 Query: 135 VLLKQHIPSSL 103 + S L Sbjct: 890 AVKLSQAKSKL 900
>FOX2_CANTR (P22414) Peroxisomal hydratase-dehydrogenase-epimerase (HDE)| (Multifunctional beta-oxidation protein) (MFP) [Includes: 2-enoyl-CoA hydratase (EC 4.2.1.-); D-3-hydroxyacyl CoA dehydrogenase (EC 1.1.1.-)] Length = 906 Score = 87.8 bits (216), Expect = 3e-17 Identities = 55/152 (36%), Positives = 75/152 (49%), Gaps = 1/152 (0%) Frame = -3 Query: 612 SGEVLCMNRSTIFLRGAGGFSDSSRPYSYTTYPANQISRISIPNSAPSAVYEDQTQQSQA 433 SGE++ N +T F+R + Y PA ++ P AP + + A Sbjct: 746 SGELIYSNEATYFIRNCQADNKV-----YADRPAFATNQFLAPKRAPDYQVDVPVSEDLA 800 Query: 432 LLYRLSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFGR 253 LYRLSGD NPLH DP A+ A F +PILHG+CT G +A+A+I F I R Sbjct: 801 ALYRLSGDRNPLHIDPNFAKGAKFPKPILHGMCTYGLSAKALIDKF-----GMFNEIKAR 855 Query: 252 FLLHVYPGETLVTEMWVDG-QRVQYQTKAKER 160 F V+PGETL W + + +QT +R Sbjct: 856 FTGIVFPGETLRVLAWKESDDTIVFQTHVVDR 887
>FAS1_YEAST (P07149) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2. Length = 2051 Score = 43.5 bits (101), Expect = 7e-04 Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 6/134 (4%) Frame = -3 Query: 498 RISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFA 319 ++++ N P AV + T + R+SGD NP+H A A I HG+ + + Sbjct: 1530 KVNLENPIPIAVLDSYTPSTNEPYARVSGDLNPIHVSRHFASYANLPGTITHGMFS-SAS 1588 Query: 318 ARAVIKSF-CNGDPAAVQNIFGRFLLHVYPGETLVTEM----WVDGQR-VQYQTKAKERD 157 RA+I+++ + + V+ +F+ V P L T + ++G++ ++++T+ E D Sbjct: 1589 VRALIENWAADSVSSRVRGYTCQFVDMVLPNTALKTSIQHVGMINGRKLIKFETR-NEDD 1647 Query: 156 RAVLSGYVLLKQHI 115 VL+G ++Q + Sbjct: 1648 VVVLTGEAEIEQPV 1661
>TOXC_COCCA (Q92215) Putative fatty acid synthase subunit TOXC [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2.3.1.3 Length = 2080 Score = 43.1 bits (100), Expect = 9e-04 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 8/144 (5%) Frame = -3 Query: 528 YTTYPANQIS---RISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVAGFA 358 Y +Y N + +S+PN+ S V S R SGD NP+H A+ AG Sbjct: 1537 YGSYSQNSVDFEDPVSVPNNGESLVI--CAPSSNEAYARTSGDLNPIHVSRTFAEYAGLP 1594 Query: 357 RPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEM----WVDGQ- 193 I HG+ V + +G+ ++ F+ V P + L ++ V+G Sbjct: 1595 GLITHGMYCSAAIQDLVERLVADGNAGRIRQFSMSFVGMVLPNQKLEVKLEHIGMVEGMI 1654 Query: 192 RVQYQTKAKERDRAVLSGYVLLKQ 121 R+ + +A+E V+ G + Q Sbjct: 1655 RLHIEARAQETGHRVIVGEAKITQ 1678
>FAS1_CANAL (P34731) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2. Length = 2037 Score = 39.7 bits (91), Expect = 0.010 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 6/106 (5%) Frame = -3 Query: 420 LSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFG-RFLL 244 +SGDYNP+H + A A I HG+ + + RA+++ + + AA F F+ Sbjct: 1542 VSGDYNPIHVSRVFAAYAKLPGTITHGMYS-SASIRALVEEWAANNVAARVRAFKCDFVG 1600 Query: 243 HVYPGETLVTEM----WVDGQR-VQYQTKAKERDRAVLSGYVLLKQ 121 V P +TL T M ++G++ ++ +T+ E + VL G ++Q Sbjct: 1601 MVLPNDTLQTTMEHVGMINGRKIIKVETRNVETELPVLIGEAEIEQ 1646
>STCK_EMENI (Q00706) Putative sterigmatocystin biosynthesis fatty acid synthase| beta subunit Length = 1914 Score = 38.9 bits (89), Expect = 0.016 Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 16/140 (11%) Frame = -3 Query: 708 CASVVNKVKVAGLHDK------GKATILEIETTTSLKDSG-EVLCMNR-----STIFLRG 565 C+ ++ K+ + LH + G L++ + SL S V+C++ +++ Sbjct: 1328 CSDLIGKILIFQLHSQTVFDAAGAPASLQVSGSVSLAPSDTSVVCVSSVGTRIGRVYMEE 1387 Query: 564 AGGFSDSSRPYSYTTYPANQISRISIPNSA---PSAVYEDQTQQSQALLYRL-SGDYNPL 397 G ++ + + A ++ R +P + A T +Q+ Y + SGD NP+ Sbjct: 1388 EGFGANPVMDF-LNRHGAPRVQRQPLPRAGWTGDDAASISFTAPAQSEGYAMVSGDTNPI 1446 Query: 396 HSDPMVAQVAGFARPILHGL 337 H P+ ++ AG +P++HGL Sbjct: 1447 HVCPLFSRFAGLGQPVVHGL 1466
>FAS1_YARLI (P34229) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2. Length = 2086 Score = 37.7 bits (86), Expect = 0.037 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 6/108 (5%) Frame = -3 Query: 420 LSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAARAVIKSF-CNGDPAAVQNIFGRFLL 244 +SGDYNP+H A A I HG+ + A R++I+ + + + V+ +F Sbjct: 1587 VSGDYNPIHVSRAFASYASLPGTITHGMYS-SAAVRSLIEVWAAENNVSRVRAFSCQFQG 1645 Query: 243 HVYPGETLVTEM----WVDGQRVQYQTKA-KERDRAVLSGYVLLKQHI 115 V P + +VT + ++G+++ T +E + VLSG ++Q I Sbjct: 1646 MVLPNDEIVTRLEHVGMINGRKIIKVTSTNRETEAVVLSGEAEVEQPI 1693
>FAS1_SCHPO (Q9UUG0) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2. Length = 2073 Score = 37.4 bits (85), Expect = 0.048 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 7/109 (6%) Frame = -3 Query: 420 LSGDYNPLHSDPMVAQVAGF--ARPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFGRFL 247 +SGDYNP+H P A I HG+ T A R V P V++ F+ Sbjct: 1572 VSGDYNPIHVSPTFAAFVELPGTHGITHGMYTSAAARRFVETYAAQNVPERVKHYEVTFV 1631 Query: 246 LHVYPGETLVTEM----WVDGQR-VQYQTKAKERDRAVLSGYVLLKQHI 115 V P L+T++ ++G++ ++ + +E VL G ++Q + Sbjct: 1632 NMVLPNTELITKLSHTGMINGRKIIKVEVLNQETSEPVLVGTAEVEQPV 1680
>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)| Length = 2570 Score = 35.4 bits (80), Expect = 0.18 Identities = 37/145 (25%), Positives = 51/145 (35%), Gaps = 32/145 (22%) Frame = -1 Query: 398 CIQTLWLHRL----QGSPVRYCTA--SAPWGSRPVRSSSRSATGIQRLCRTYLAGSCCTS 237 C+ T W GS + C S+P R V S +G Q LCR+ AG+ C Sbjct: 1950 CVTTTWKPSCCPGHYGSECQACPGGPSSPCSDRGVCMDGMSGSG-QCLCRSGFAGTACEL 2008 Query: 236 TPAKRWSPRC----------------GSMARGCS---TRPR-------RKSATAPCSPDT 135 + P C GS + C T PR + T PC+P+ Sbjct: 2009 CAPGAFGPHCQACRCTVHGRCDEGLGGSGSCFCDEGWTGPRCEVQLELQPVCTPPCAPEA 2068 Query: 134 CCSNNTSPHHCKCRCVIRTIGEICS 60 C S C+C G +C+ Sbjct: 2069 VCRAGNS---CECSLGYEGDGRVCT 2090
>DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila Delta homolog| 3) (M-Delta-3) Length = 592 Score = 35.0 bits (79), Expect = 0.24 Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 2/100 (2%) Frame = -1 Query: 353 RYCTASAPWGSRPVRSSSRSATGIQRL-CRTYLAGSCCTSTPAKRWSP-RCGSMARGCST 180 R A PW R+ + R C G+ C R +P RCG R C+ Sbjct: 148 RRLAAGGPWARDVQRTGTWELHFSYRARCEPPAVGAACARLCRSRSAPSRCGPGLRPCTP 207 Query: 179 RPRRKSATAPCSPDTCCSNNTSPHHCKCRCVIRTIGEICS 60 P A + C P + +CRC+ G +C+ Sbjct: 208 FPDECEAPSVCRPGCSPEHGYCEEPDECRCLEGWTGPLCT 247
>Y2081_STRCO (P45497) UPF0124 protein SCO2081| Length = 242 Score = 34.7 bits (78), Expect = 0.31 Identities = 27/110 (24%), Positives = 39/110 (35%) Frame = -1 Query: 392 QTLWLHRLQGSPVRYCTASAPWGSRPVRSSSRSATGIQRLCRTYLAGSCCTSTPAKRWSP 213 + +W++++ G+ V APWG RPV T + L L C P P Sbjct: 60 RVVWMNQVHGADV--AVVDAPWGDRPVPRVDAVVTAERGLALAVLTADC---VPVLLADP 114 Query: 212 RCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCRCVIRTIGEIC 63 G A + RP + P + P R V RT +C Sbjct: 115 VSGVAAAAHAGRPGLVAGVVPAAVRAMAELGADP----ARIVARTGPAVC 160
>MAOC_KLEAE (P49251) Protein maoC| Length = 335 Score = 34.7 bits (78), Expect = 0.31 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 8/102 (7%) Frame = -3 Query: 420 LSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAA--------RAVIKSFCNGDPAAVQN 265 LSGD+ H D + A + F ++HG + AA R VI ++ ++N Sbjct: 225 LSGDHFYAHMDKIAAAESIFGERVVHGYFLISAAAGLFVDAGVRPVIANY------GMEN 278 Query: 264 IFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAVLSG 139 + RF+ V PG+T+ + + V++Q A E+ A +G Sbjct: 279 L--RFIEPVKPGDTIQVRLTCKRKTVKHQRSADEKAPAWWNG 318
>MAOC_ECOLI (P77455) Protein maoC (Phenylacetic acid degradation protein paaZ)| Length = 681 Score = 34.3 bits (77), Expect = 0.40 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 5/106 (4%) Frame = -3 Query: 420 LSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFG----R 253 LSGD+ H D + A + F ++HG L AA + + G + N +G R Sbjct: 558 LSGDHFYAHMDKIAAAESIFGERVVHGYFVLSAAAGLFVDA---GVGPVIAN-YGLESLR 613 Query: 252 FLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAVLSGYV-LLKQH 118 F+ V PG+T+ + + ++ Q A+E+ V+ V + QH Sbjct: 614 FIEPVKPGDTIQVRLTCKRKTLKKQRSAEEKPTGVVEWAVEVFNQH 659
>FOG2_HUMAN (Q8WW38) Zinc finger protein ZFPM2 (Zinc finger protein multitype| 2) (Friend of GATA protein 2) (FOG-2) (hFOG-2) Length = 1151 Score = 33.5 bits (75), Expect = 0.69 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 466 CRRCGIWNRNARNLVGRISRIRVWPGRVRKTSSTTQENSTPVH 594 C+ CGIW R+ RNL + + GR R+ + ++EN H Sbjct: 252 CKSCGIWYRSERNLQAHL--MYYCSGRQREAAPVSEENEDSAH 292
>CD97_HUMAN (P48960) CD97 antigen precursor (Leukocyte antigen CD97)| Length = 835 Score = 33.1 bits (74), Expect = 0.90 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 8/70 (11%) Frame = -1 Query: 278 RLCRTYLAGSC--------CTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSN 123 RLC++Y G+C C P ++ P + C+ S PC T C N Sbjct: 125 RLCKSY--GTCVNTLGSYTCQCLPGFKFIPEDPKV---CTDVNECTSGQNPCHSSTHCLN 179 Query: 122 NTSPHHCKCR 93 N + C+CR Sbjct: 180 NVGSYQCRCR 189
>EMR2_HUMAN (Q9UHX3) EGF-like module-containing mucin-like hormone| receptor-like 2 precursor (EGF-like module EMR2) (CD312 antigen) Length = 823 Score = 33.1 bits (74), Expect = 0.90 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 8/70 (11%) Frame = -1 Query: 278 RLCRTYLAGSC--------CTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSN 123 RLC++Y G+C C P + P + C+ S PC T C N Sbjct: 128 RLCKSY--GTCVNTLGSYTCQCLPGFKLKPEDPKL---CTDVNECTSGQNPCHSSTHCLN 182 Query: 122 NTSPHHCKCR 93 N + C+CR Sbjct: 183 NVGSYQCRCR 192
>FOG2_MOUSE (Q8CCH7) Zinc finger protein ZFPM2 (Zinc finger protein multitype| 2) (Friend of GATA protein 2) (Friend of GATA-2) (FOG-2) (mFOG-2) Length = 1151 Score = 32.3 bits (72), Expect = 1.5 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 466 CRRCGIWNRNARNLVGRISRIRVWPGRVRKTSSTTQENSTPVH 594 C+ CGIW R+ RNL + + GR R+ + ++EN H Sbjct: 252 CKSCGIWYRSERNLQAHL--MYYCSGRQREAAPVSEENEDNSH 292
>ARVC_HUMAN (O00192) Armadillo repeat protein deleted in velo-cardio-facial| syndrome Length = 962 Score = 31.6 bits (70), Expect = 2.6 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Frame = -1 Query: 299 RSATGIQRLCRTYLA-GSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTC 132 R + L R YL+ G P R SP GS++RG RP R P D C Sbjct: 170 RGGGPVATLSRAYLSSGGGFPEGPEPRDSPSYGSLSRGLGMRPPRAGPLGPGPGDGC 226
>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein| 5.9) (Ultrahigh sulfur keratin-associated protein 5.9) (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra high-sulfur matrix protein A) (UHS keratin A) (UHS KerA) Length = 169 Score = 31.6 bits (70), Expect = 2.6 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -1 Query: 251 SCCTSTPAKRWSPRCGSMARGC-STRPRRKSATAPCSPDTCCSNNTSPHHCKCRC 90 +C S+ KR CG GC S + S PC CCS+ C+C C Sbjct: 51 ACSCSSCGKRGCGSCGGSKGGCGSCGCSQCSCCKPC----CCSSGCGSSCCQCSC 101 Score = 29.6 bits (65), Expect = 10.0 Identities = 16/61 (26%), Positives = 22/61 (36%) Frame = -1 Query: 272 CRTYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCR 93 C + SCC + K + +C CS+ R S C +CC S C Sbjct: 88 CSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSS----CCQSSCCKPCCSSSGCGSS 143 Query: 92 C 90 C Sbjct: 144 C 144
>VE2_HPV24 (P50770) Regulatory protein E2| Length = 467 Score = 31.2 bits (69), Expect = 3.4 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = -1 Query: 353 RYCTASAPWGSRPVRSSSRS-ATGIQRLCRTYLAGSCCTSTPAKRWSPRCGSMARGCSTR 177 R C P G R V +SSR G +R S +S+P +PR + RGC TR Sbjct: 300 RRCRGDTPRGQRGVSTSSRGRGRGSRR--------SSSSSSP----TPRTKASQRGCDTR 347 Query: 176 PRRKSATAP 150 R S +P Sbjct: 348 SVRDSGISP 356
>CSMD2_HUMAN (Q7Z408) CUB and sushi domain-containing protein 2 (CUB and sushi| multiple domains protein 2) Length = 3487 Score = 30.8 bits (68), Expect = 4.5 Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 10/101 (9%) Frame = -1 Query: 371 LQGSPVRYCTASAPW-GSRPVRSSSRSAT---------GIQRLCRTYLAGSCCTSTPAKR 222 L GSP R+C + W G++P T GIQ + Y GS K Sbjct: 3102 LVGSPRRFCQSDGTWSGTQPSCIDPTLTTCADPGVPQFGIQNNSQGYQVGSTVLFRCQK- 3160 Query: 221 WSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCK 99 G + +G +TR + T +P C PHHC+ Sbjct: 3161 -----GYLLQGSTTRTCLPNLTWSGTPPDCV-----PHHCR 3191
>DPO4_BACCR (Q818U9) DNA polymerase IV (EC 2.7.7.7) (Pol IV)| Length = 415 Score = 30.8 bits (68), Expect = 4.5 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = +2 Query: 269 CTAAGSPLQNDLMTARAANPRVQRPCSIGRANPATCATIGSECK 400 C A GSPL+ M +A +Q PCSIG A A S+ K Sbjct: 124 CYALGSPLEIAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMK 167
>MURD_RHILO (Q98KB1) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 466 Score = 30.8 bits (68), Expect = 4.5 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +2 Query: 257 PNMFCTAAGSPLQNDLMTARAANPRVQRPCSIGRANPATCATIG 388 P ++ A G P + + R PR+ + IG A PA AT+G Sbjct: 352 PRIYWIAGGLPKEGGIEPLRGFFPRIAKAYLIGEAAPAFSATLG 395
>DPO4_BACAN (Q81M86) DNA polymerase IV (EC 2.7.7.7) (Pol IV)| Length = 412 Score = 30.8 bits (68), Expect = 4.5 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = +2 Query: 269 CTAAGSPLQNDLMTARAANPRVQRPCSIGRANPATCATIGSECK 400 C A GSPL+ M +A +Q PCSIG A A S+ K Sbjct: 121 CYALGSPLEIAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMK 164
>CRYS_DICDI (P21837) Crystal protein precursor| Length = 550 Score = 30.8 bits (68), Expect = 4.5 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = +1 Query: 538 PGRVRKTSSTTQENSTPVHT*HFTRILEAGRSFDLENSCFPFVVQTSYLNLVYNT 702 PGR S + Q N +P++ + ++L G SF+ +C V + L +V+NT Sbjct: 403 PGRYH-VSKSAQANESPIYHYQYKQVLSGGHSFE---ACEGLVCHGTELPMVFNT 453
>MRAZ_NOCFA (Q5YYY8) Protein mraZ| Length = 143 Score = 30.4 bits (67), Expect = 5.8 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = +2 Query: 284 SPLQNDLMTARAANPRVQRPCSIGR----ANPATCATIGSECKGL*SPDNLYKSAWDCCV 451 +P + A AA QRP + GR A+ A + +C + S D L WD Sbjct: 62 NPQARAFVRALAAGTDEQRPDAQGRITLSADHRRYANLSRDCVVIGSVDFL--EIWDKQA 119 Query: 452 WSSYTAEGAEFGIEMREIWLAG 517 W SY AE E + R+ L G Sbjct: 120 WESYLAEHEEDYAQARDESLGG 141
>MT23B_MYTED (P80258) Metallothionein 20-III isoform B (MT-20-IIIB)| Length = 71 Score = 30.4 bits (67), Expect = 5.8 Identities = 20/60 (33%), Positives = 25/60 (41%) Frame = -1 Query: 275 LCRTYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKC 96 +C T +G CC A + + CG GC R S T C D T P +CKC Sbjct: 13 ICGTGCSGKCCQCGDACKCASGCG--CSGCKV-VCRCSGTCACGCDC-----TGPTNCKC 64
>ZP2_HUMAN (Q05996) Zona pellucida sperm-binding protein 2 precursor (Zona| pellucida glycoprotein ZP2) (Zona pellucida protein A) Length = 745 Score = 30.4 bits (67), Expect = 5.8 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Frame = -3 Query: 657 KATILEIETTTSLKDSGEVLCMNRSTIF---LRGAGGFSDSSRPYSYTTYPANQISRISI 487 K T L T S+ E LC + +I L GF D YSY T PA + + + Sbjct: 340 KLTFLLRPETVSMVIYPECLCESPVSIVTGELCTQDGFMDVE-VYSYQTQPALDLGTLRV 398 Query: 486 PNSAPSAVYEDQTQ 445 NS+ V+E Q+Q Sbjct: 399 GNSSCQPVFEAQSQ 412
>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL| receptor) (Scavenger receptor class F member 1) Length = 830 Score = 30.4 bits (67), Expect = 5.8 Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 10/79 (12%) Frame = -1 Query: 269 RTYLAGSCCTSTPAKRWSPRC------GSMARGCSTRPRRKSATAPCSPDT----CCSNN 120 R A CT P R + RC GS C+ R PCSPDT C Sbjct: 229 RCSAASGECTCPPGFRGA-RCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPG 287 Query: 119 TSPHHCKCRCVIRTIGEIC 63 + C+ C+ T GE C Sbjct: 288 WNGTQCQQPCLPGTFGESC 306
>KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-associated| protein 10.6) (High sulfur keratin-associated protein 10.6) (Keratin-associated protein 18-6) (Keratin-associated protein 18.6) Length = 365 Score = 30.4 bits (67), Expect = 5.8 Identities = 22/90 (24%), Positives = 32/90 (35%) Frame = -1 Query: 401 PCIQTLWLHRLQGSPVRYCTASAPWGSRPVRSSSRSATGIQRLCRTYLAGSCCTSTPAKR 222 PC + G+ C S+ + S RS++ + LC +CC P+ Sbjct: 265 PCQHACCVPVCSGASTSCCQQSSCQPACCTASCCRSSSSVSLLCHPVCKSTCCVPVPS-- 322 Query: 221 WSPRCGSMARGCSTRPRRKSATAPCSPDTC 132 CG+ A C R TA C C Sbjct: 323 ----CGASASSCQPSCCR---TASCVSLLC 345
>YCR2_ENTAG (Q01336) Hypothetical protein in crtE 3'region (ORF2) (Fragment)| Length = 529 Score = 30.4 bits (67), Expect = 5.8 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = -3 Query: 291 NGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAV 148 NG+ +AV N+ G+ + GE L+ EMW V K +D+ V Sbjct: 68 NGNISAVLNLKGQLAFYNQRGELLLEEMWRQRSTVGIGASEKSQDKYV 115
>SPY1_HUMAN (O43609) Sprouty homolog 1 (Spry-1)| Length = 319 Score = 30.4 bits (67), Expect = 5.8 Identities = 37/148 (25%), Positives = 55/148 (37%), Gaps = 18/148 (12%) Frame = -1 Query: 449 HNNPRHSYTGYLGIII-------PCIQTLWLHRLQGSPVRYCTASAPWG-------SRPV 312 +NN H +T +LG + P + S +AS+ G +RPV Sbjct: 86 NNNYEHRHTSHLGHAVLPSNARGPILSRSTSTGSAASSGSNSSASSEQGLLGRSPPTRPV 145 Query: 311 ---RSSSRSATGIQRLCRTYLAGSCCTS-TPAKRWSPRCGSMARGCSTRPRRKSATAPCS 144 RS T ++L L GS T K +CG G T PR + C+ Sbjct: 146 PGHRSERAIRTQPKQLIVDDLKGSLKEDLTQHKFICEQCGKCKCGECTAPRTLPSCLACN 205 Query: 143 PDTCCSNNTSPHHCKCRCVIRTIGEICS 60 CS + + C C+++ I CS Sbjct: 206 RQCLCSAESMVEYGTCMCLVKGIFYHCS 233
>CELR3_RAT (O88278) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| (Multiple epidermal growth factor-like domains 2) Length = 3313 Score = 30.4 bits (67), Expect = 5.8 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 7/69 (10%) Frame = -1 Query: 245 CTSTPAKRWSPRCGSMARGCST-----RPRRKSATAPCS--PDTCCSNNTSPHHCKCRCV 87 C K + P C + C RPR + PC P S + +PH +C C Sbjct: 2031 CNCDVHKGFDPNCNKTSGQCHCKEFHYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCR 2090 Query: 86 IRTIGEICS 60 +G C+ Sbjct: 2091 PGALGRQCN 2099
>ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog| Length = 328 Score = 30.0 bits (66), Expect = 7.6 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +1 Query: 112 GDV-LFEQHVSGEHGAVALFRLGLVLHPLAIDPHLGDQRFAGVDVQQEPAKY 264 GD+ +F +H+S + ALF L +++P DP + D GV + + Y Sbjct: 224 GDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTDFTTPGVTIFMQVPSY 275
>ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog| Length = 328 Score = 30.0 bits (66), Expect = 7.6 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +1 Query: 112 GDV-LFEQHVSGEHGAVALFRLGLVLHPLAIDPHLGDQRFAGVDVQQEPAKY 264 GD+ +F +H+S + ALF L +++P DP + D GV + + Y Sbjct: 224 GDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTDFTTPGVTIFMQVPSY 275
>MT23A_MYTGA (P69154) Metallothionein 20-III isoform A (MT-20-IIIA) (MT-I)| Length = 71 Score = 30.0 bits (66), Expect = 7.6 Identities = 20/60 (33%), Positives = 25/60 (41%) Frame = -1 Query: 275 LCRTYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKC 96 +C T +G CC A + + CG GC R S T C D T P +CKC Sbjct: 13 ICGTGCSGKCCQCGDACKCASGCG--CSGCKV-VCRCSGTCACGCDC-----TGPINCKC 64
>MT23A_MYTED (P69153) Metallothionein 20-III isoform A (MT-20-IIIA)| Length = 71 Score = 30.0 bits (66), Expect = 7.6 Identities = 20/60 (33%), Positives = 25/60 (41%) Frame = -1 Query: 275 LCRTYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKC 96 +C T +G CC A + + CG GC R S T C D T P +CKC Sbjct: 13 ICGTGCSGKCCQCGDACKCASGCG--CSGCKV-VCRCSGTCACGCDC-----TGPINCKC 64
>NOTCH_DROME (P07207) Neurogenic locus Notch protein precursor| Length = 2703 Score = 29.6 bits (65), Expect = 10.0 Identities = 16/70 (22%), Positives = 25/70 (35%) Frame = -1 Query: 266 TYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCRCV 87 T L G C + ++ C + G + A++PC C+ C C Sbjct: 147 TCLNGGTCQLKTLEEYTCACANGYTGERCETKNLCASSPCRNGATCTALAGSSSFTCSCP 206 Query: 86 IRTIGEICSY 57 G+ CSY Sbjct: 207 PGFTGDTCSY 216
>MRE11_PYRAB (Q9UZC9) DNA double-strand break repair protein mre11| Length = 423 Score = 29.6 bits (65), Expect = 10.0 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = -3 Query: 600 LCMNRSTIFLRGAGGFSDSSRPYSYTTYPANQISRISIPNSAPSAVYE---DQTQQSQAL 430 +C++ F+ AG +SSRP T A +I +I N+ P E D+TQ+ ++ Sbjct: 45 ICVDEKVDFIVIAGDLFNSSRPSPGTIKTAVKILQIPRDNNIPVFAIEGNHDRTQRGPSI 104 Query: 429 LYRL 418 L+ L Sbjct: 105 LHLL 108
>FOLD_SALTY (P58688) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 287 Score = 29.6 bits (65), Expect = 10.0 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = +2 Query: 554 KPPAPRKKIVLLFIHNTSPESLRLVVVSISRIVAFPLSCKPATLTLFTTLAH 709 +P PR + LL +N L VV+ S IV P+S + TT+ H Sbjct: 138 RPCTPRGIVTLLERYNIDTYGLNAVVIGASNIVGRPMSMELLLAGCTTTVTH 189
>FOLD_SALTI (Q60006) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 287 Score = 29.6 bits (65), Expect = 10.0 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = +2 Query: 554 KPPAPRKKIVLLFIHNTSPESLRLVVVSISRIVAFPLSCKPATLTLFTTLAH 709 +P PR + LL +N L VV+ S IV P+S + TT+ H Sbjct: 138 RPCTPRGIVTLLERYNIDTYGLNAVVIGASNIVGRPMSMELLLAGCTTTVTH 189
>MRE11_PYRHO (O58686) DNA double-strand break repair protein mre11| Length = 413 Score = 29.6 bits (65), Expect = 10.0 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = -3 Query: 600 LCMNRSTIFLRGAGGFSDSSRPYSYTTYPANQISRISIPNSAPSAVYE---DQTQQSQAL 430 +C+ S F+ AG +SSRP T A ++ +I N+ P E D+TQ+ ++ Sbjct: 35 MCVKESVDFIIIAGDLFNSSRPSPGTIKTAIKLLQIPKENNIPVFAIEGNHDRTQRGPSV 94 Query: 429 LYRL 418 L+ L Sbjct: 95 LHLL 98 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 114,904,701 Number of Sequences: 219361 Number of extensions: 2688757 Number of successful extensions: 8628 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 7799 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8596 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7536258401 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
