Clone Name | rbasd18f24 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5) | 34 | 0.54 | 2 | ORK1_DROME (Q94526) Open rectifier potassium channel protein 1 (... | 31 | 3.5 | 3 | YK13_CAEEL (P34337) Putative tyrosine-protein phosphatase C15H7.... | 30 | 6.0 | 4 | AKT6_ARATH (Q8GXE6) Potassium channel AKT6 (Shaker pollen inward... | 30 | 7.8 |
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>EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5)| Length = 427 Score = 33.9 bits (76), Expect = 0.54 Identities = 25/91 (27%), Positives = 34/91 (37%) Frame = +3 Query: 387 YSPRNPKTLISHKVPAESYKQHPPIPGRHRLWLRLGRYLIVFEPPTFVLD**KHPWQMLS 566 +SP PK +K P K + P P H Y+ PP P + S Sbjct: 331 HSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP---------PVKHYS 381 Query: 567 QLFVFHKSKNFTSDYEIRMPPTVPINHYSDP 659 V+H Y + PP P++HYS P Sbjct: 382 PPPVYHSPPPPKEKYVYKSPPPPPVHHYSPP 412
>ORK1_DROME (Q94526) Open rectifier potassium channel protein 1 (Two pore| domain potassium channel Ork1) Length = 1001 Score = 31.2 bits (69), Expect = 3.5 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -1 Query: 441 RTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPASS 334 R PP P+E + SL SGG + + + DG P S+ Sbjct: 599 RGPPPPFESNGSLASGGGGLTNMGFQMEDGATPPSA 634
>YK13_CAEEL (P34337) Putative tyrosine-protein phosphatase C15H7.3 (EC| 3.1.3.48) Length = 398 Score = 30.4 bits (67), Expect = 6.0 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +1 Query: 40 KLATSKSANDRLMNRERRSKRPRRLGAELMASW*TRR 150 K TSKS NDR + ER+SK+ + G + S TR+ Sbjct: 11 KKKTSKSGNDRSIRSERKSKQKKPAGEKSQKSRRTRK 47
>AKT6_ARATH (Q8GXE6) Potassium channel AKT6 (Shaker pollen inward rectifier| K(+) channel) (Potassium channel SPIK) Length = 888 Score = 30.0 bits (66), Expect = 7.8 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = -1 Query: 546 VFINQERKLGARRRSDTVLVSTINDADQGSADVAYRTPPAPYEKSKSLGSGGSMV 382 V ++Q+RKL R S ++S N AD G R+P P G GGSM+ Sbjct: 773 VVVSQKRKLNNFRNSLFGIISAANSADDGGE--VPRSPAVP-------GGGGSMI 818 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,042,224 Number of Sequences: 219361 Number of extensions: 2015932 Number of successful extensions: 4935 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4756 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4933 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7706249192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)