ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18f18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009005.1| Triticum aestivum clone wdk2c.pk018.g2:fis, full ... 811 0.0
2ref|NM_189093.2| Oryza sativa (japonica cultivar-group), mRNA 145 2e-31
3dbj|AK059272.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
4gb|AY108711.1| Zea mays PCO139150 mRNA sequence 111 2e-21
5ref|NM_111177.3| Arabidopsis thaliana unknown protein AT3G03070 ... 101 2e-18
6gb|AF325039.2|AF325039 Arabidopsis thaliana AT3g03070 (AT3g03070... 101 2e-18
7emb|BX825616.1|CNS0A4XY Arabidopsis thaliana Full-length cDNA Co... 101 2e-18
8emb|BX826264.1|CNS0A6CC Arabidopsis thaliana Full-length cDNA Co... 101 2e-18
9gb|BT004574.1| Arabidopsis thaliana At3g03070 gene, complete cds 101 2e-18
10gb|AY087471.1| Arabidopsis thaliana clone 35785 mRNA, complete s... 101 2e-18
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
12dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
13gb|AC124954.14| Medicago truncatula clone mth2-10g9, complete se... 56 1e-04
14gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC... 52 0.002
15emb|AJ429077.1|HMA429077 Haloarcula marismortui ORF11, ORF10, OR... 44 0.46
16gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 44 0.46
17gb|AC123709.9| Mus musculus chromosome 13, clone RP23-375O18, co... 44 0.46
18gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete s... 42 1.8
19gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 7.2
20gb|AC126041.3| Mus musculus BAC clone RP24-268A23 from chromosom... 40 7.2
21gb|AC134540.3| Mus musculus BAC clone RP24-400M10 from chromosom... 40 7.2
22gb|AC125331.4| Mus musculus chromosome 7 clone RP23-11L1, comple... 40 7.2
23gb|AC098715.3| Mus musculus BAC clone RP23-2D23 from 7, complete... 40 7.2
24gb|AC166741.1| Brassica rapa subsp. pekinensis clone KBrH080C09,... 40 7.2
25gb|AC016839.12| Homo sapiens chromosome 18, clone RP11-399L5, co... 40 7.2
26gb|AC069548.6| Homo sapiens chromosome 10 clone RP11-522H2, comp... 40 7.2
27gb|AY198340.1| Hordeum vulgare subsp. vulgare phosphoethanolamin... 40 7.2
28gb|AC151286.4| Mus musculus BAC clone RP23-368B8 from chromosome... 40 7.2
29gb|AC165087.4| Mus musculus BAC clone RP23-198K7 from chromosome... 40 7.2
30emb|AL604023.12| Mouse DNA sequence from clone RP23-468D17 on ch... 40 7.2 
>gb|BT009005.1| Triticum aestivum clone wdk2c.pk018.g2:fis, full insert mRNA sequence
          Length = 1782

 Score =  811 bits (409), Expect = 0.0
 Identities = 466/485 (96%)
 Strand = Plus / Minus

                                                                        
Query: 33   aagtaggatgacagtcatagacaacattttgccatcaagcgcaatacacagtacattggc 92
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1583 aagtaggatgacagtcacagacaacattttgccatcaagcgcaatacacagtacattggc 1524

                                                                        
Query: 93   atacattgtgaacccaacaagcatgcagcaactccaaattctgctgtggtaaattaaggt 152
            |||||||||||||||||  ||||||||||||||||||||||||||||||||||  | |||
Sbjct: 1523 atacattgtgaacccaatgagcatgcagcaactccaaattctgctgtggtaaaggatggt 1464

                                                                        
Query: 153  atcttgtctaattagtgatggtggtcttgaacatagcgaaggccgcagtatttgcacaca 212
            ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 atcttctctacttagtgatggtggtcttgaacatagcgaaggccgcagtatttgcacaca 1404

                                                                        
Query: 213  gcaggtgcctccagatcaaggcagatgtactcaattggatggccaagggcagggttttta 272
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 gcaggtgcatccagatcaaggcagatgtactcaattggatggccaagggcagggttttta 1344

                                                                        
Query: 273  tccccttcacatgcagcaattcgcccttcaaccttgatcggtggcacctcattgatcagt 332
            |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 1343 tccccttcacatgcggcaattcgcccttcaaccttgattggtggcacctcattgataagt 1284

                                                                        
Query: 333  tccattggagatttcttgcttgtgtcctgcatccatttggcggtgtggcttccaacgacg 392
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1283 tccattggagatttcttgcttgtgtcctgcatccatttcgcggtgtggcttccaacgacg 1224

                                                                        
Query: 393  gccgcagcgccgactgccttccccgtggcgaagccccgcgccgcgccagcgtggcgggtg 452
            ||||| ||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||
Sbjct: 1223 gccgcggcgccgactgccttctccgtggcgaggccccgcgccgcgccagggtggcgggtg 1164

                                                                        
Query: 453  ccggttagggttctaaggagcgtcgggagcagcctcctcgttgcggtcgccatggctgat 512
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 ccggttagggttctgaggagcgtcgggagcagcctcctcgttgcggtcgccatggctgat 1104

                 
Query: 513  aacgg 517
             ||||
Sbjct: 1103 gacgg 1099
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>ref|NM_189093.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 569

 Score =  145 bits (73), Expect = 2e-31
 Identities = 139/161 (86%)
 Strand = Plus / Minus

                                                                       
Query: 279 tcacatgcagcaattcgcccttcaaccttgatcggtggcacctcattgatcagttccatt 338
           ||||| ||||||||||| ||||||||||||||||| || ||  | ||||||| |||||||
Sbjct: 254 tcacaagcagcaattcgtccttcaaccttgatcggaggtactgcgttgatcaattccatt 195

                                                                       
Query: 339 ggagatttcttgcttgtgtcctgcatccatttggcggtgtggcttccaacgacggccgca 398
           || || ||||||||||||||||||||||| |||||||||||||| || |||||||| || 
Sbjct: 194 ggggacttcttgcttgtgtcctgcatccacttggcggtgtggctgccgacgacggcggcg 135

                                                    
Query: 399 gcgccgactgccttccccgtggcgaagccccgcgccgcgcc 439
           |||||||| ||| || |||||| || ||| ||||| |||||
Sbjct: 134 gcgccgaccgccctctccgtggagacgcctcgcgcggcgcc 94



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 88/109 (80%)
 Strand = Plus / Minus

                                                                       
Query: 153 atcttgtctaattagtgatggtggtcttgaacatagcgaaggccgcagtatttgcacaca 212
           |||||||||  | |||||||||| ||||||||| | || || || ||||| ||||| |||
Sbjct: 395 atcttgtcttctcagtgatggtgatcttgaacaaaacggagaccacagtacttgcataca 336

                                                            
Query: 213 gcaggtgcctccagatcaaggcagatgtactcaattggatggccaaggg 261
           |||||    ||||| ||||||||||| || || || |||||||| ||||
Sbjct: 335 gcaggctggtccaggtcaaggcagatatattcgatcggatggccgaggg 287
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>dbj|AK059272.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B12, full
           insert sequence
          Length = 569

 Score =  145 bits (73), Expect = 2e-31
 Identities = 139/161 (86%)
 Strand = Plus / Minus

                                                                       
Query: 279 tcacatgcagcaattcgcccttcaaccttgatcggtggcacctcattgatcagttccatt 338
           ||||| ||||||||||| ||||||||||||||||| || ||  | ||||||| |||||||
Sbjct: 254 tcacaagcagcaattcgtccttcaaccttgatcggaggtactgcgttgatcaattccatt 195

                                                                       
Query: 339 ggagatttcttgcttgtgtcctgcatccatttggcggtgtggcttccaacgacggccgca 398
           || || ||||||||||||||||||||||| |||||||||||||| || |||||||| || 
Sbjct: 194 ggggacttcttgcttgtgtcctgcatccacttggcggtgtggctgccgacgacggcggcg 135

                                                    
Query: 399 gcgccgactgccttccccgtggcgaagccccgcgccgcgcc 439
           |||||||| ||| || |||||| || ||| ||||| |||||
Sbjct: 134 gcgccgaccgccctctccgtggagacgcctcgcgcggcgcc 94



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 88/109 (80%)
 Strand = Plus / Minus

                                                                       
Query: 153 atcttgtctaattagtgatggtggtcttgaacatagcgaaggccgcagtatttgcacaca 212
           |||||||||  | |||||||||| ||||||||| | || || || ||||| ||||| |||
Sbjct: 395 atcttgtcttctcagtgatggtgatcttgaacaaaacggagaccacagtacttgcataca 336

                                                            
Query: 213 gcaggtgcctccagatcaaggcagatgtactcaattggatggccaaggg 261
           |||||    ||||| ||||||||||| || || || |||||||| ||||
Sbjct: 335 gcaggctggtccaggtcaaggcagatatattcgatcggatggccgaggg 287
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>gb|AY108711.1| Zea mays PCO139150 mRNA sequence
          Length = 724

 Score =  111 bits (56), Expect = 2e-21
 Identities = 119/140 (85%)
 Strand = Plus / Minus

                                                                       
Query: 274 ccccttcacatgcagcaattcgcccttcaaccttgatcggtggcacctcattgatcagtt 333
           ||||||||||  | ||||| || || ||||||||||| || || ||||| ||||||||||
Sbjct: 261 ccccttcacagacggcaatgcgaccatcaaccttgattggaggtacctcgttgatcagtt 202

                                                                       
Query: 334 ccattggagatttcttgcttgtgtcctgcatccatttggcggtgtggcttccaacgacgg 393
           ||||||| || |||||||| |||||||||||||| || ||||||||||| || |||||||
Sbjct: 201 ccattggcgacttcttgctcgtgtcctgcatccacttagcggtgtggctgccgacgacgg 142

                               
Query: 394 ccgcagcgccgactgccttc 413
           | || ||||| || ||||||
Sbjct: 141 cggctgcgccaacagccttc 122



 Score =  103 bits (52), Expect = 6e-19
 Identities = 85/96 (88%)
 Strand = Plus / Minus

                                                                       
Query: 164 ttagtgatggtggtcttgaacatagcgaaggccgcagtatttgcacacagcaggtgcctc 223
           ||||||||||||  |||||||||| || || || ||||| |||||||||  |||||||||
Sbjct: 374 ttagtgatggtgaacttgaacataacggagaccacagtacttgcacacattaggtgcctc 315

                                               
Query: 224 cagatcaaggcagatgtactcaattggatggccaag 259
           ||||||||||||||||||||| ||||| ||||||||
Sbjct: 314 cagatcaaggcagatgtactcgattgggtggccaag 279



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 458 tagggttctaaggagcgtcgggagcagcctcctcgttgcggtcgccatggctg 510
           |||||| || |||||||  ||||||||||||| ||| ||||||||||||||||
Sbjct: 89  tagggtcctgaggagcgcggggagcagcctccgcgtcgcggtcgccatggctg 37
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>ref|NM_111177.3| Arabidopsis thaliana unknown protein AT3G03070 mRNA, complete cds
          Length = 714

 Score =  101 bits (51), Expect = 2e-18
 Identities = 165/203 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcttgaacatagcgaaggccgcagtatttgcacacagcaggtgcctccagatcaaggcag 236
           ||||||||||| |||||||||||||| ||||| |  |||||  | |  || || ||||| 
Sbjct: 407 tcttgaacataacgaaggccgcagtacttgcagatcgcaggctcatttaggtcgaggcat 348

                                                                       
Query: 237 atgtactcaattggatggccaagggcagggtttttatccccttcacatgcagcaattcgc 296
           ||| |||| |||||||| || ||||| || ||  | || |||||||| ||| |||| |  
Sbjct: 347 atgaactcgattggatgacctagggccggattggtgtctccttcacaagcaacaatcctt 288

                                                                       
Query: 297 ccttcaaccttgatcggtggcacctcattgatcagttccattggagatttcttgcttgtg 356
           || ||||| ||||| ||||| |||||| | ||||||||||| || |||||||||||| | 
Sbjct: 287 ccatcaactttgataggtggaacctcactaatcagttccataggtgatttcttgcttcta 228

                                  
Query: 357 tcctgcatccatttggcggtgtg 379
           |||||||||||||||||||||||
Sbjct: 227 tcctgcatccatttggcggtgtg 205
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>gb|AF325039.2|AF325039 Arabidopsis thaliana AT3g03070 (AT3g03070/T17B22_24) mRNA, complete
           cds
          Length = 572

 Score =  101 bits (51), Expect = 2e-18
 Identities = 165/203 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcttgaacatagcgaaggccgcagtatttgcacacagcaggtgcctccagatcaaggcag 236
           ||||||||||| |||||||||||||| ||||| |  |||||  | |  || || ||||| 
Sbjct: 347 tcttgaacataacgaaggccgcagtacttgcagatcgcaggctcatttaggtcgaggcat 288

                                                                       
Query: 237 atgtactcaattggatggccaagggcagggtttttatccccttcacatgcagcaattcgc 296
           ||| |||| |||||||| || ||||| || ||  | || |||||||| ||| |||| |  
Sbjct: 287 atgaactcgattggatgacctagggccggattggtgtctccttcacaagcaacaatcctt 228

                                                                       
Query: 297 ccttcaaccttgatcggtggcacctcattgatcagttccattggagatttcttgcttgtg 356
           || ||||| ||||| ||||| |||||| | ||||||||||| || |||||||||||| | 
Sbjct: 227 ccatcaactttgataggtggaacctcactaatcagttccataggtgatttcttgcttcta 168

                                  
Query: 357 tcctgcatccatttggcggtgtg 379
           |||||||||||||||||||||||
Sbjct: 167 tcctgcatccatttggcggtgtg 145
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>emb|BX825616.1|CNS0A4XY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL49ZE04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 533

 Score =  101 bits (51), Expect = 2e-18
 Identities = 165/203 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcttgaacatagcgaaggccgcagtatttgcacacagcaggtgcctccagatcaaggcag 236
           ||||||||||| |||||||||||||| ||||| |  |||||  | |  || || ||||| 
Sbjct: 377 tcttgaacataacgaaggccgcagtacttgcagatcgcaggctcatttaggtcgaggcat 318

                                                                       
Query: 237 atgtactcaattggatggccaagggcagggtttttatccccttcacatgcagcaattcgc 296
           ||| |||| |||||||| || ||||| || ||  | || |||||||| ||| |||| |  
Sbjct: 317 atgaactcgattggatgacctagggccggattggtgtctccttcacaagcaacaatcctt 258

                                                                       
Query: 297 ccttcaaccttgatcggtggcacctcattgatcagttccattggagatttcttgcttgtg 356
           || ||||| ||||| ||||| |||||| | ||||||||||| || |||||||||||| | 
Sbjct: 257 ccatcaactttgataggtggaacctcactaatcagttccataggtgatttcttgcttcta 198

                                  
Query: 357 tcctgcatccatttggcggtgtg 379
           |||||||||||||||||||||||
Sbjct: 197 tcctgcatccatttggcggtgtg 175
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>emb|BX826264.1|CNS0A6CC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL95ZA08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 614

 Score =  101 bits (51), Expect = 2e-18
 Identities = 165/203 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcttgaacatagcgaaggccgcagtatttgcacacagcaggtgcctccagatcaaggcag 236
           ||||||||||| |||||||||||||| ||||| |  |||||  | |  || || ||||| 
Sbjct: 307 tcttgaacataacgaaggccgcagtacttgcagatcgcaggctcatttaggtcgaggcat 248

                                                                       
Query: 237 atgtactcaattggatggccaagggcagggtttttatccccttcacatgcagcaattcgc 296
           ||| |||| |||||||| || ||||| || ||  | || |||||||| ||| |||| |  
Sbjct: 247 atgaactcgattggatgacctagggccggattggtgtctccttcacaagcaacaatcctt 188

                                                                       
Query: 297 ccttcaaccttgatcggtggcacctcattgatcagttccattggagatttcttgcttgtg 356
           || ||||| ||||| ||||| |||||| | ||||||||||| || |||||||||||| | 
Sbjct: 187 ccatcaactttgataggtggaacctcactaatcagttccataggtgatttcttgcttcta 128

                                  
Query: 357 tcctgcatccatttggcggtgtg 379
           |||||||||||||||||||||||
Sbjct: 127 tcctgcatccatttggcggtgtg 105
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>gb|BT004574.1| Arabidopsis thaliana At3g03070 gene, complete cds
          Length = 333

 Score =  101 bits (51), Expect = 2e-18
 Identities = 165/203 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcttgaacatagcgaaggccgcagtatttgcacacagcaggtgcctccagatcaaggcag 236
           ||||||||||| |||||||||||||| ||||| |  |||||  | |  || || ||||| 
Sbjct: 320 tcttgaacataacgaaggccgcagtacttgcagatcgcaggctcatttaggtcgaggcat 261

                                                                       
Query: 237 atgtactcaattggatggccaagggcagggtttttatccccttcacatgcagcaattcgc 296
           ||| |||| |||||||| || ||||| || ||  | || |||||||| ||| |||| |  
Sbjct: 260 atgaactcgattggatgacctagggccggattggtgtctccttcacaagcaacaatcctt 201

                                                                       
Query: 297 ccttcaaccttgatcggtggcacctcattgatcagttccattggagatttcttgcttgtg 356
           || ||||| ||||| ||||| |||||| | ||||||||||| || |||||||||||| | 
Sbjct: 200 ccatcaactttgataggtggaacctcactaatcagttccataggtgatttcttgcttcta 141

                                  
Query: 357 tcctgcatccatttggcggtgtg 379
           |||||||||||||||||||||||
Sbjct: 140 tcctgcatccatttggcggtgtg 118
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>gb|AY087471.1| Arabidopsis thaliana clone 35785 mRNA, complete sequence
          Length = 639

 Score =  101 bits (51), Expect = 2e-18
 Identities = 165/203 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcttgaacatagcgaaggccgcagtatttgcacacagcaggtgcctccagatcaaggcag 236
           ||||||||||| |||||||||||||| ||||| |  |||||  | |  || || ||||| 
Sbjct: 416 tcttgaacataacgaaggccgcagtacttgcagatcgcaggctcatttaggtcgaggcat 357

                                                                       
Query: 237 atgtactcaattggatggccaagggcagggtttttatccccttcacatgcagcaattcgc 296
           ||| |||| |||||||| || ||||| || ||  | || |||||||| ||| |||| |  
Sbjct: 356 atgaactcgattggatgacctagggccggattggtgtctccttcacaagcaacaatcctt 297

                                                                       
Query: 297 ccttcaaccttgatcggtggcacctcattgatcagttccattggagatttcttgcttgtg 356
           || ||||| ||||| ||||| |||||| | ||||||||||| || |||||||||||| | 
Sbjct: 296 ccatcaactttgataggtggaacctcactaatcagttccataggtgatttcttgcttcta 237

                                  
Query: 357 tcctgcatccatttggcggtgtg 379
           |||||||||||||||||||||||
Sbjct: 236 tcctgcatccatttggcggtgtg 214
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 75/85 (88%)
 Strand = Plus / Minus

                                                                           
Query: 279     tcacatgcagcaattcgcccttcaaccttgatcggtggcacctcattgatcagttccatt 338
               ||||| ||||||||||| ||||||||||||||||| || ||  | ||||||| |||||||
Sbjct: 3608979 tcacaagcagcaattcgtccttcaaccttgatcggaggtactgcgttgatcaattccatt 3608920

                                        
Query: 339     ggagatttcttgcttgtgtcctgca 363
               || || |||||||||||||||||||
Sbjct: 3608919 ggggacttcttgcttgtgtcctgca 3608895



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                           
Query: 358     cctgcatccatttggcggtgtggcttccaacgacggccgcagcgccgactgccttccccg 417
               |||||||||| |||||||||||||| || |||||||| || |||||||| ||| || |||
Sbjct: 3607232 cctgcatccacttggcggtgtggctgccgacgacggcggcggcgccgaccgccctctccg 3607173

                                     
Query: 418     tggcgaagccccgcgccgcgcc 439
               ||| || ||| ||||| |||||
Sbjct: 3607172 tggagacgcctcgcgcggcgcc 3607151



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 88/109 (80%)
 Strand = Plus / Minus

                                                                           
Query: 153     atcttgtctaattagtgatggtggtcttgaacatagcgaaggccgcagtatttgcacaca 212
               |||||||||  | |||||||||| ||||||||| | || || || ||||| ||||| |||
Sbjct: 3609244 atcttgtcttctcagtgatggtgatcttgaacaaaacggagaccacagtacttgcataca 3609185

                                                                
Query: 213     gcaggtgcctccagatcaaggcagatgtactcaattggatggccaaggg 261
               |||||    ||||| ||||||||||| || || || |||||||| ||||
Sbjct: 3609184 gcaggctggtccaggtcaaggcagatatattcgatcggatggccgaggg 3609136
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>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0577B11
          Length = 180355

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 75/85 (88%)
 Strand = Plus / Minus

                                                                         
Query: 279   tcacatgcagcaattcgcccttcaaccttgatcggtggcacctcattgatcagttccatt 338
             ||||| ||||||||||| ||||||||||||||||| || ||  | ||||||| |||||||
Sbjct: 87485 tcacaagcagcaattcgtccttcaaccttgatcggaggtactgcgttgatcaattccatt 87426

                                      
Query: 339   ggagatttcttgcttgtgtcctgca 363
             || || |||||||||||||||||||
Sbjct: 87425 ggggacttcttgcttgtgtcctgca 87401



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                         
Query: 358   cctgcatccatttggcggtgtggcttccaacgacggccgcagcgccgactgccttccccg 417
             |||||||||| |||||||||||||| || |||||||| || |||||||| ||| || |||
Sbjct: 85738 cctgcatccacttggcggtgtggctgccgacgacggcggcggcgccgaccgccctctccg 85679

                                   
Query: 418   tggcgaagccccgcgccgcgcc 439
             ||| || ||| ||||| |||||
Sbjct: 85678 tggagacgcctcgcgcggcgcc 85657



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 88/109 (80%)
 Strand = Plus / Minus

                                                                         
Query: 153   atcttgtctaattagtgatggtggtcttgaacatagcgaaggccgcagtatttgcacaca 212
             |||||||||  | |||||||||| ||||||||| | || || || ||||| ||||| |||
Sbjct: 87750 atcttgtcttctcagtgatggtgatcttgaacaaaacggagaccacagtacttgcataca 87691

                                                              
Query: 213   gcaggtgcctccagatcaaggcagatgtactcaattggatggccaaggg 261
             |||||    ||||| ||||||||||| || || || |||||||| ||||
Sbjct: 87690 gcaggctggtccaggtcaaggcagatatattcgatcggatggccgaggg 87642
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>gb|AC124954.14| Medicago truncatula clone mth2-10g9, complete sequence
          Length = 115040

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 56/64 (87%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                         
Query: 297   ccttcaaccttgatcggtggcacctcattgatcagttccattggagatttcttgcttgtg 356
             ||||| ||||| || | |||||| |||||||| || ||||||||||||||||||||||| 
Sbjct: 72040 ccttcgaccttaatagttggcacttcattgat-agctccattggagatttcttgcttgta 72098

                 
Query: 357   tcct 360
             ||||
Sbjct: 72099 tcct 72102
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>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence,
             complete sequence
          Length = 96540

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                   
Query: 300   tcaaccttgatcggtggcacctcattgatcagttccattggagatttcttgctt 353
             ||||| ||||| ||||| |||||| | ||||||||||| || ||||||||||||
Sbjct: 83922 tcaactttgataggtggaacctcactaatcagttccataggtgatttcttgctt 83869



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 177   tcttgaacatagcgaaggccgcagtatttgca 208
             ||||||||||| |||||||||||||| |||||
Sbjct: 84150 tcttgaacataacgaaggccgcagtacttgca 84119



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 358   cctgcatccatttggcggtgtg 379
             ||||||||||||||||||||||
Sbjct: 82825 cctgcatccatttggcggtgtg 82804
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>emb|AJ429077.1|HMA429077 Haloarcula marismortui ORF11, ORF10, ORF1, ORF2, ORF3, ORF4, narG gene,
             narH gene, ORF7, ORF8, narJ gene and ORF12 (partial)
          Length = 11087

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 388   cgacggccgcagcgccgactgc 409
             ||||||||||||||||||||||
Sbjct: 10244 cgacggccgcagcgccgactgc 10223
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 388     cgacggccgcagcgccgactgc 409
               ||||||||||||||||||||||
Sbjct: 1072329 cgacggccgcagcgccgactgc 1072308
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>gb|AC123709.9| Mus musculus chromosome 13, clone RP23-375O18, complete sequence
          Length = 99670

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 206   gcacacagcaggtgcctccaga 227
             ||||||||||||||||||||||
Sbjct: 66169 gcacacagcaggtgcctccaga 66148
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>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence
          Length = 634917

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 316    gcacctcattgatcagttcca 336
              |||||||||||||||||||||
Sbjct: 601442 gcacctcattgatcagttcca 601422
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    tcgcccttcaaccttgatcg 312
              ||||||||||||||||||||
Sbjct: 592917 tcgcccttcaaccttgatcg 592936
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>gb|AC126041.3| Mus musculus BAC clone RP24-268A23 from chromosome 18, complete
           sequence
          Length = 168391

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 atccccttcacatgcagcaa 291
           ||||||||||||||||||||
Sbjct: 228 atccccttcacatgcagcaa 209
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>gb|AC134540.3| Mus musculus BAC clone RP24-400M10 from chromosome 18, complete sequence
          Length = 189505

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    atccccttcacatgcagcaa 291
              ||||||||||||||||||||
Sbjct: 176161 atccccttcacatgcagcaa 176142
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>gb|AC125331.4| Mus musculus chromosome 7 clone RP23-11L1, complete sequence
          Length = 255921

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   ggtttttatccccttcacat 284
             ||||||||||||||||||||
Sbjct: 64693 ggtttttatccccttcacat 64712
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>gb|AC098715.3| Mus musculus BAC clone RP23-2D23 from 7, complete sequence
          Length = 247835

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    ggtttttatccccttcacat 284
              ||||||||||||||||||||
Sbjct: 232522 ggtttttatccccttcacat 232541
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>gb|AC166741.1| Brassica rapa subsp. pekinensis clone KBrH080C09, complete sequence
          Length = 132099

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 292   ttcgcccttcaaccttgatcggtg 315
             ||||||||| ||||||||||||||
Sbjct: 92474 ttcgccctttaaccttgatcggtg 92497
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>gb|AC016839.12| Homo sapiens chromosome 18, clone RP11-399L5, complete sequence
          Length = 152689

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 337    ttggagatttcttgcttgtgtcct 360
              ||||||||||||||||||| ||||
Sbjct: 124410 ttggagatttcttgcttgtttcct 124433
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>gb|AC069548.6| Homo sapiens chromosome 10 clone RP11-522H2, complete sequence
          Length = 131909

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      aagttaaagtcacattatta 24
              ||||||||||||||||||||
Sbjct: 118141 aagttaaagtcacattatta 118160
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>gb|AY198340.1| Hordeum vulgare subsp. vulgare phosphoethanolamine
            cytidylyltransferase mRNA, complete cds
          Length = 1783

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 337  ttggagatttcttgcttgtg 356
            ||||||||||||||||||||
Sbjct: 1031 ttggagatttcttgcttgtg 1050
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>gb|AC151286.4| Mus musculus BAC clone RP23-368B8 from chromosome 17, complete sequence
          Length = 178835

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    cgcaatacacagtacattgg 91
             ||||||||||||||||||||
Sbjct: 68881 cgcaatacacagtacattgg 68900
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>gb|AC165087.4| Mus musculus BAC clone RP23-198K7 from chromosome 17, complete sequence
          Length = 211272

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    cgcaatacacagtacattgg 91
             ||||||||||||||||||||
Sbjct: 34310 cgcaatacacagtacattgg 34291
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>emb|AL604023.12| Mouse DNA sequence from clone RP23-468D17 on chromosome 11, complete
             sequence
          Length = 225399

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   ttgcttgtgtcctgcatcca 367
             ||||||||||||||||||||
Sbjct: 30773 ttgcttgtgtcctgcatcca 30792


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,370,351
Number of Sequences: 3902068
Number of extensions: 4370351
Number of successful extensions: 77799
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77671
Number of HSP's gapped (non-prelim): 128
length of query: 535
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 512
effective length of database: 17,143,297,704
effective search space: 8777368424448
effective search space used: 8777368424448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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