>KCNN4_HUMAN (O15554) Intermediate conductance calcium-activated potassium|
           channel protein 4 (SK4) (KCa4) (IK1) (IKCa1) (Putative
           Gardos channel)
          Length = 427

 Score = 32.3 bits (72), Expect = 0.98
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -2

Query: 253 LDKQKDQRGWRRCLGDGQMMLMHFELVTIWFGRLTW-LHLCCLSCITEISEDLL 95
           L+++K   GW   L    + LM      +WFG  +W L+L  + C   IS  LL
Sbjct: 19  LEQEKSLAGWALVLAGTGIGLMVLHAEMLWFGGCSWALYLFLVKCTISISTFLL 72

>GAP_CAEEL (P34288) GTPase-activating protein GAP (CeGAP)|
          Length = 1317

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -3

Query: 552 GTSPAGDDNRPPPANGARSAGSFRMGTEDTKDMLKNADWKTVSGPVITESS 400
           GT+  GD N     NG  S+ S     ++++D    +   TV+GPV T SS
Sbjct: 89  GTARVGDSNEATAENGTSSSSS----RKNSRDDGLTSSPTTVAGPVFTTSS 135

>SCNAA_MOUSE (Q61180) Amiloride-sensitive sodium channel alpha-subunit|
           (Epithelial Na+ channel alpha subunit) (Alpha ENaC)
           (Nonvoltage-gated sodium channel 1 alpha subunit)
           (SCNEA) (Alpha NaCH)
          Length = 699

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -3

Query: 522 PPPANGARSAGSFRMGTEDTKDMLKNADWK 433
           PPP N ARSA S      D    +   DWK
Sbjct: 221 PPPPNPARSARSASSSVRDNNPQVDRKDWK 250

>TOP2A_PIG (O46374) DNA topoisomerase 2-alpha (EC 5.99.1.3) (DNA topoisomerase|
            II, alpha isozyme)
          Length = 1533

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 549  TSPAGDDNRPPPANGARSAGSFRMGTEDTKDMLKNADWKTVSG-PVITESSQPVVKKRLP 373
            TSP   +  P P     S   F    +D KD +  +    V+  P +TE+ +PV KK + 
Sbjct: 1360 TSPKHTNKEPKPQKSTPSVSDF--DADDAKDNVPPSPSSPVADFPAVTETIKPVSKKNVT 1417

Query: 372  KK 367
             K
Sbjct: 1418 VK 1419

>UVRA_PARDE (P29927) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A) (Fragment)
          Length = 110

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 471 EDTKDMLKNADWKTVSGPVITESSQPVVKKRLPKKIRQVPECY 343
           E   D++K ADW    GP   +    +V    P+++ +VPE +
Sbjct: 51  EHNLDVIKTADWIIDIGPEGGDGGGAIVATGTPEQVAEVPESH 93

>SYE2_COXBU (Q83BL6) Glutamyl-tRNA synthetase 2 (EC 6.1.1.17) (Glutamate--tRNA|
           ligase 2) (GluRS 2)
          Length = 464

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 170 NLVWQTHLASLMLLKLYHGNKRRFVVSDYLLRLTNADNVFRC 45
           NL WQ    +      YH +KR+ +  DY  RL  AD  + C
Sbjct: 63  NLEWQEGPGADEGNGPYHQSKRQAIYDDYYQRLEEADQAYPC 104

>KCNQ2_HUMAN (O43526) Potassium voltage-gated channel subfamily KQT member 2|
           (Voltage-gated potassium channel subunit Kv7.2)
           (Neuroblastoma-specific potassium channel alpha subunit
           KvLQT2) (KQT-like 2)
          Length = 872

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = -3

Query: 555 HGTSPAGDDNR----PPPANGARSAGSFRMGTEDTKDMLKNAD 439
           HGTSP GD       PPP    RS  ++  G   + + L+  D
Sbjct: 728 HGTSPVGDHGSLVRIPPPPAHERSLSAYGGGNRASMEFLRQED 770


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,921,008
Number of Sequences: 219361
Number of extensions: 1491225
Number of successful extensions: 4353
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4351
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)