>gb|AY549888.2| Triticum aestivum putative proteinase inhibitor-related protein
           (wrsi5-1) mRNA, complete cds
          Length = 608

 Score =  557 bits (281), Expect = e-155
 Identities = 405/444 (91%), Gaps = 3/444 (0%)
 Strand = Plus / Minus

                                                                       
Query: 41  tacatattgttggccgtataacgcggcccacacacaagcatagcaacacgatgactgctc 100
           |||||||||||||||||||| | || |||||| | ||||||||   | | ||||||||||
Sbjct: 477 tacatattgttggccgtatagcacgacccacagagaagcatagg--cgccatgactgctc 420

                                                                       
Query: 101 atctcatctgagctttattctaggcggcacacctcgtccgagcctgaagccctgaagcga 160
           ||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||||  ||
Sbjct: 419 atctcatctgagctttattttaggcggcacccctcgtctgagactgaagccctgaacgga 360

                                                                       
Query: 161 tcagtgctttttgcatgggccaccgcaggtgccgtcgacggtgctcttcatgtcggcgca 220
           |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct: 359 tcagtgctttttgcatggcccgccgcaggtgccatcgacggtgctcttcatgtcggcgca 300

                                                                       
Query: 221 gcggaacgtcttgtgagggctcggggtcaccacgcggcaggcggagcagcctttggggca 280
            |||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||
Sbjct: 299 ccggaacgtcttgtgagggctgggcgtcaccacgcggcaggccgagcagcccttggggca 240

                                                                       
Query: 281 cttggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttgttgcagca 340
           || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 239 ctgggggtgggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcagca 180

                                                                       
Query: 341 cttggggaagaagtcggcgttcacgtgggagaggatccccatgaccaggacggcctggag 400
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 179 cttggggaagaagtcggcgttcacgtgtgagaggatccccatgaccaggacggcctggag 120

                                                                       
Query: 401 gatgaggatcgccgccagcttggtgcccttcatggctgcggatgaactctcttagcgcaa 460
           ||| ||||||||||| |||||||||| |||||||  ||| ||||||| || |||||||||
Sbjct: 119 gatcaggatcgccgcgagcttggtgctcttcatgcttgctgatgaaccct-ttagcgcaa 61

                                   
Query: 461 agctcgagctttacctgtgcggtc 484
           |||||   ||| ||||||||||||
Sbjct: 60  agctctcacttcacctgtgcggtc 37

>emb|Z48729.1|HVBSI1 H.vulgare Bsi1 gene for putative protease inhibitor
          Length = 498

 Score =  307 bits (155), Expect = 2e-80
 Identities = 256/289 (88%), Gaps = 3/289 (1%)
 Strand = Plus / Minus

                                                                       
Query: 156 agcgatcagtgctttttgcatgggccaccgcaggtgccgtcgacggtgctcttcatgtcg 215
           |||||||||| ||| |||||||| || |||||||||||||||||||||   |||||||||
Sbjct: 286 agcgatcagtacttcttgcatggcccgccgcaggtgccgtcgacggtggctttcatgtcg 227

                                                                       
Query: 216 gcgcagcggaacgtcttgtgagggctcggggtcaccacgcggcaggcggagcagcctttg 275
           |||||||||||||||| |   ||| ||| ||||||||||||||| || ||||||||  ||
Sbjct: 226 gcgcagcggaacgtctgg---gggttcgtggtcaccacgcggcacgccgagcagccggtg 170

                                                                       
Query: 276 gggcacttggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttgttg 335
           |||||||  || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 169 gggcactgcggatgggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttg 110

                                                                       
Query: 336 cagcacttggggaagaagtcggcgttcacgtgggagaggatccccatgaccaggacggcc 395
           |||||| |||||||  || ||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 109 cagcacgtggggaaatagacggcgttcacgtgcgagaggactcccatgaccaggacggcc 50

                                                            
Query: 396 tggaggatgaggatcgccgccagcttggtgcccttcatggctgcggatg 444
           |||||||| || |||||||| ||||||||||||||||||| ||| ||||
Sbjct: 49  tggaggatcagaatcgccgcgagcttggtgcccttcatggttgctgatg 1

>gb|L11882.1|WHTWALI5A Triticum aestivum protein of unknown function (wali5) mRNA,
           complete cds
          Length = 520

 Score =  295 bits (149), Expect = 7e-77
 Identities = 250/283 (88%), Gaps = 3/283 (1%)
 Strand = Plus / Minus

                                                                       
Query: 153 tgaagcgatcagtgctttttgcatgggccaccgcaggtgccgtcgacggtgctcttcatg 212
           |||| |||||||| ||| ||||| || ||||||||||||||||||||||||   ||||| 
Sbjct: 350 tgaaccgatcagtacttcttgcagggtccaccgcaggtgccgtcgacggtggatttcata 291

                                                                       
Query: 213 tcggcgcagcggaacgtcttgtgagggctcggggtcaccacgcggcaggcggagcagcct 272
           || ||||||||  || | | |   |||||||  | |||||||||||| || |||||||| 
Sbjct: 290 tccgcgcagcgccacatttcg---gggctcgtcgacaccacgcggcacgccgagcagccc 234

                                                                       
Query: 273 ttggggcacttggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttg 332
           | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tggggacacttggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttg 174

                                                                       
Query: 333 ttgcagcacttggggaagaagtcggcgttcacgtgggagaggatccccatgaccaggacg 392
           ||||||||||||||||| || |||||||||||||| |||||||  |||||||||||||||
Sbjct: 173 ttgcagcacttggggaaaaaatcggcgttcacgtgtgagaggagtcccatgaccaggacg 114

                                                      
Query: 393 gcctggaggatgaggatcgccgccagcttggtgcccttcatgg 435
           ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 113 gcctggaggatcaggatcgccgcgagcttggtgcccttcatgg 71



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 1   ctttttgtcgagagagaaaacacagtgacga 31
           |||||| |||||||||||||||||| |||||
Sbjct: 497 ctttttctcgagagagaaaacacagcgacga 467

>gb|L28009.1|WHTWALIA Triticum aestivum (wali6) mRNA, complete cds
          Length = 585

 Score =  117 bits (59), Expect = 4e-23
 Identities = 118/137 (86%), Gaps = 3/137 (2%)
 Strand = Plus / Minus

                                                                       
Query: 277 ggcacttggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttgttgc 336
           |||||||||||  |||||||||||||||  || ||||||||||| |||||||||||| ||
Sbjct: 229 ggcacttggggccggcgtcgtcgcagaccacggcccccgagaagaacctgcagttgtcgc 170

                                                                       
Query: 337 agcacttggggaagaagtcggcgttcacgtgggagaggatccccatgaccaggacggcct 396
           |||| || ||   ||| ||||||||| | || |||||||| |||||||||||||||||||
Sbjct: 169 agcatttcgg---gaactcggcgttcgcctgtgagaggattcccatgaccaggacggcct 113

                            
Query: 397 ggaggatgaggatcgcc 413
           |||| || |||||||||
Sbjct: 112 ggagaatcaggatcgcc 96

>gb|L11881.1|WHTWALI3A Triticum aestivum protein of unknown function (wali3) mRNA,
           complete cds
          Length = 564

 Score =  117 bits (59), Expect = 4e-23
 Identities = 115/133 (86%), Gaps = 3/133 (2%)
 Strand = Plus / Minus

                                                                       
Query: 277 ggcacttggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttgttgc 336
           |||||||||||  |||||| ||||||||  || ||||||||||| |||||||||||| ||
Sbjct: 208 ggcacttggggccggcgtcatcgcagaccacggcccccgagaagaacctgcagttgtcgc 149

                                                                       
Query: 337 agcacttggggaagaagtcggcgttcacgtgggagaggatccccatgaccaggacggcct 396
           ||||||||||   ||| ||||||||| | || |||||||| |||||||||||||||||||
Sbjct: 148 agcacttggg---gaactcggcgttcgcctgtgagaggattcccatgaccaggacggcct 92

                        
Query: 397 ggaggatgaggat 409
           | ||||| |||||
Sbjct: 91  gaaggatcaggat 79

>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
             sequence; splicing factor SF2-like protein (SF2) and
             universal stress protein (USP1) genes and Hv
             receptor-kinase-like pseudogene, complete cds; and
             retrotransposons Sandra6 and Sandra7, complete sequence
          Length = 82293

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 367   gggagaggatccccatgaccaggacggcctggagga 402
             |||||||||| ||||||||||||| |||||||||||
Sbjct: 71845 gggagaggattcccatgaccaggatggcctggagga 71810

>ref|NM_184249.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 306

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 375 atccccatgaccaggacggcctggag 400
           ||||||||||||||||||||||||||
Sbjct: 59  atccccatgaccaggacggcctggag 34

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                         
Query: 375     atccccatgaccaggacggcctggag 400
               ||||||||||||||||||||||||||
Sbjct: 1757672 atccccatgaccaggacggcctggag 1757697

>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504H10
          Length = 143515

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 375    atccccatgaccaggacggcctggag 400
              ||||||||||||||||||||||||||
Sbjct: 100015 atccccatgaccaggacggcctggag 100040

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 368      ggagaggatccccatgaccagga 390
                |||||||||||||||||||||||
Sbjct: 25930540 ggagaggatccccatgaccagga 25930562

>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0017B12
          Length = 157424

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 368   ggagaggatccccatgaccagga 390
             |||||||||||||||||||||||
Sbjct: 85638 ggagaggatccccatgaccagga 85660

>dbj|AK070101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044I16, full
           insert sequence
          Length = 2261

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 368 ggagaggatccccatgaccagga 390
           |||||||||||||||||||||||
Sbjct: 840 ggagaggatccccatgaccagga 818

>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 190    tgccgtcgacggtgctcttca 210
              |||||||||||||||||||||
Sbjct: 634922 tgccgtcgacggtgctcttca 634902

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 325     tgcagttgttgcagcacttg 344
               ||||||||||||||||||||
Sbjct: 2027872 tgcagttgttgcagcacttg 2027891

>ref|NM_001040330.1| Danio rerio zgc:136662 (zgc:136662), mRNA
          Length = 2659

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  gcaggtgccgtcgacggtgc 204
            ||||||||||||||||||||
Sbjct: 1389 gcaggtgccgtcgacggtgc 1408

>ref|NM_001012370.1| Danio rerio exostoses (multiple) 1c (ext1c), mRNA
          Length = 2214

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  gcaggtgccgtcgacggtgc 204
            ||||||||||||||||||||
Sbjct: 1137 gcaggtgccgtcgacggtgc 1156

>gb|BC115216.1| Danio rerio exostoses (multiple) 1c, mRNA (cDNA clone MGC:136662
            IMAGE:8000407), complete cds
          Length = 2659

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  gcaggtgccgtcgacggtgc 204
            ||||||||||||||||||||
Sbjct: 1389 gcaggtgccgtcgacggtgc 1408

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 391     cggcctggaggatgaggatcgccgccag 418
               |||| |||||||| ||||||||||||||
Sbjct: 1946720 cggcgtggaggatcaggatcgccgccag 1946747

>gb|AC090116.15| Homo sapiens 12q BAC RP11-578B16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162004

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    ctgctcatctcatctgagct 114
             ||||||||||||||||||||
Sbjct: 86150 ctgctcatctcatctgagct 86131

>ref|XM_680169.1| PREDICTED: Danio rerio similar to EXT1c (LOC572763), partial mRNA
          Length = 240

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gcaggtgccgtcgacggtgc 204
           ||||||||||||||||||||
Sbjct: 117 gcaggtgccgtcgacggtgc 136

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     tttttgcatgggccaccgca 187
               ||||||||||||||||||||
Sbjct: 1357636 tttttgcatgggccaccgca 1357655

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    tcatgtcggcgcagcggaac 227
              ||||||||||||||||||||
Sbjct: 807692 tcatgtcggcgcagcggaac 807673

>gb|AF042096.3|AF042096 Bradyrhizobium japonicum UbiE (ubiE) gene, partial cds; AarF (aarF),
            panthotenate metabolism flavoprotein (dfp),
            deoxyuridine-triphosphatase (dut), putative sensor
            protein (bdfA), GalF-like (galF), hypothetical protein
            genes, complete cds; putative helicase 2 gene, partial
            cds; and unknown genes
          Length = 13289

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 208  tcatgtcggcgcagcggaac 227
            ||||||||||||||||||||
Sbjct: 8347 tcatgtcggcgcagcggaac 8366

>gb|AY734457.1| Danio rerio EXT1c mRNA, complete cds
          Length = 2214

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  gcaggtgccgtcgacggtgc 204
            ||||||||||||||||||||
Sbjct: 1137 gcaggtgccgtcgacggtgc 1156


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,509,677
Number of Sequences: 3902068
Number of extensions: 3509677
Number of successful extensions: 64294
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64009
Number of HSP's gapped (non-prelim): 281
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)