ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18f04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191468.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1398 Score = 139 bits (70), Expect = 1e-29 Identities = 133/154 (86%) Strand = Plus / Minus Query: 440 tgctaccggaagccttatagggtgtgggatacctgctactgtatggcttgaatgactttg 499 ||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| | Sbjct: 784 tgctaccggaagccttataaggtgtggggtacctatagctgtatggcttgaatggcttcg 725 Query: 500 tttcaccaaattcaggagcaaagccaatctcatggtttccagctgtcgagatccaaggct 559 ||||||||| ||| || ||||| | |||||||| |||||||||||| |||||||||||| Sbjct: 724 tttcaccaagttctggggcaaaatctatctcatgatttccagctgtccagatccaaggct 665 Query: 560 ggtatgcgagattccgctctacaaatcttaccca 593 |||| || | ||||| ||||||||||||| |||| Sbjct: 664 ggtaggcaacattcctctctacaaatcttgccca 631
>dbj|AK071643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105J09, full insert sequence Length = 2008 Score = 139 bits (70), Expect = 1e-29 Identities = 133/154 (86%) Strand = Plus / Minus Query: 440 tgctaccggaagccttatagggtgtgggatacctgctactgtatggcttgaatgactttg 499 ||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| | Sbjct: 1056 tgctaccggaagccttataaggtgtggggtacctatagctgtatggcttgaatggcttcg 997 Query: 500 tttcaccaaattcaggagcaaagccaatctcatggtttccagctgtcgagatccaaggct 559 ||||||||| ||| || ||||| | |||||||| |||||||||||| |||||||||||| Sbjct: 996 tttcaccaagttctggggcaaaatctatctcatgatttccagctgtccagatccaaggct 937 Query: 560 ggtatgcgagattccgctctacaaatcttaccca 593 |||| || | ||||| ||||||||||||| |||| Sbjct: 936 ggtaggcaacattcctctctacaaatcttgccca 903
>dbj|AK059025.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B09, full insert sequence Length = 1536 Score = 139 bits (70), Expect = 1e-29 Identities = 133/154 (86%) Strand = Plus / Minus Query: 440 tgctaccggaagccttatagggtgtgggatacctgctactgtatggcttgaatgactttg 499 ||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| | Sbjct: 603 tgctaccggaagccttataaggtgtggggtacctatagctgtatggcttgaatggcttcg 544 Query: 500 tttcaccaaattcaggagcaaagccaatctcatggtttccagctgtcgagatccaaggct 559 ||||||||| ||| || ||||| | |||||||| |||||||||||| |||||||||||| Sbjct: 543 tttcaccaagttctggggcaaaatctatctcatgatttccagctgtccagatccaaggct 484 Query: 560 ggtatgcgagattccgctctacaaatcttaccca 593 |||| || | ||||| ||||||||||||| |||| Sbjct: 483 ggtaggcaacattcctctctacaaatcttgccca 450
>dbj|AB023386.1| Glycine max mRNA for acid phosphatase, partial cds Length = 223 Score = 123 bits (62), Expect = 8e-25 Identities = 122/142 (85%) Strand = Plus / Minus Query: 440 tgctaccggaagccttatagggtgtgggatacctgctactgtatggcttgaatgactttg 499 ||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| | Sbjct: 142 tgctaccggaagccttataaggtgtggggtacctatagctgtatggcttgaatggcttcg 83 Query: 500 tttcaccaaattcaggagcaaagccaatctcatggtttccagctgtcgagatccaaggct 559 ||||||||| ||| || ||||| | |||||||| |||||||||||| |||||||||||| Sbjct: 82 tttcaccaagttctggggcaaaatctatctcatgatttccagctgtccagatccaaggct 23 Query: 560 ggtatgcgagattccgctctac 581 |||| || | ||||| |||||| Sbjct: 22 ggtaggcaacattcctctctac 1
>emb|AJ538650.1|NTA538650 Nicotiana tabacum cDNA-AFLP-fragment BC32-M2-053 Length = 234 Score = 97.6 bits (49), Expect = 5e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 440 tgctaccggaagccttatagggtgtgggatacctgctactgtatggcttgaatgactttg 499 ||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| | Sbjct: 113 tgctaccggaagccttataaggtgtggggtacctatagctgtatggcttgaatggcttcg 54 Query: 500 tttcaccaaattcaggagcaaagccaatctcatggtttccagctgtcgagatc 552 ||||||||| ||| || ||||| | |||||||| |||||||||||| ||||| Sbjct: 53 tttcaccaagttctggggcaaaatctatctcatgatttccagctgtccagatc 1
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 526 atctcatggtttccagctgtcgagatccaaggctggtatgcgagattccgctctacaaat 585 |||||||| |||||||||||| |||||||||||||||| || | ||||| |||||||||| Sbjct: 32843369 atctcatgatttccagctgtccagatccaaggctggtaggcaacattcctctctacaaat 32843428 Query: 586 cttaccca 593 ||| |||| Sbjct: 32843429 cttgccca 32843436 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 440 tgctaccggaagccttatagggtgtgggatacctgctactgtatggcttgaatgactttg 499 ||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| | Sbjct: 32843158 tgctaccggaagccttataaggtgtggggtacctatagctgtatggcttgaatggcttcg 32843217 Query: 500 tttcacc 506 ||||||| Sbjct: 32843218 tttcacc 32843224
>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413G02 Length = 155633 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 526 atctcatggtttccagctgtcgagatccaaggctggtatgcgagattccgctctacaaat 585 |||||||| |||||||||||| |||||||||||||||| || | ||||| |||||||||| Sbjct: 64774 atctcatgatttccagctgtccagatccaaggctggtaggcaacattcctctctacaaat 64833 Query: 586 cttaccca 593 ||| |||| Sbjct: 64834 cttgccca 64841 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 440 tgctaccggaagccttatagggtgtgggatacctgctactgtatggcttgaatgactttg 499 ||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| | Sbjct: 64563 tgctaccggaagccttataaggtgtggggtacctatagctgtatggcttgaatggcttcg 64622 Query: 500 tttcacc 506 ||||||| Sbjct: 64623 tttcacc 64629
>dbj|AK060314.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C12, full insert sequence Length = 1042 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 440 tgctaccggaagccttatagggtgtgggatacctgctactgtatggcttgaatgactttg 499 ||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| | Sbjct: 97 tgctaccggaagccttataaggtgtggggtacctatagctgtatggcttgaatggcttcg 38 Query: 500 tttcaccaaattcaggagcaaa 521 ||||||||| ||| || ||||| Sbjct: 37 tttcaccaagttctggggcaaa 16
>gb|AY598341.1| Solanum tuberosum purple acid phosphatase 2 (PAP2) mRNA, partial cds Length = 1601 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 479 tgtatggcttgaatgactttgtttcaccaaattcaggagcaaagccaatctcatggtttc 538 |||| |||||||||| |||||||| |||| |||||||||||| | ||||||||||||| Sbjct: 691 tgtagggcttgaatggttttgtttccccaatttcaggagcaaaatctatctcatggtttc 632 Query: 539 cagctgtcgagatccaagg 557 | |||||| | |||||||| Sbjct: 631 ctgctgtccaaatccaagg 613
>dbj|AB017967.1| Nicotiana tabacum PAP mRNA for purple acid phosphatase, complete cds, isolate:NtPAP12 Length = 1920 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 479 tgtatggcttgaatgactttgtttcaccaaattcaggagcaaagccaatctcatggtttc 538 |||| |||||||| | ||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 1051 tgtagggcttgaaaggctttgtttccccaatttcaggagcaaaatctatctcatgatttc 992 Query: 539 cagctgtcgagatccaagg 557 | || ||| | |||||||| Sbjct: 991 ctgcagtccaaatccaagg 973
>dbj|AB023388.1| Lycopersicon esculentum mRNA for acid phosphatase, partial cds Length = 223 Score = 46.1 bits (23), Expect = 0.16 Identities = 65/79 (82%) Strand = Plus / Minus Query: 479 tgtatggcttgaatgactttgtttcaccaaattcaggagcaaagccaatctcatggtttc 538 |||| ||||| |||| |||||||| |||| |||||||||||| | | |||||| |||| Sbjct: 103 tgtagggcttaaatggttttgtttccccaatttcaggagcaaaatctaactcatgatttc 44 Query: 539 cagctgtcgagatccaagg 557 | |||||| | |||||||| Sbjct: 43 ctgctgtccaaatccaagg 25
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 307 gaactgcaaacacctttgatgtggaa 332 |||||||||| ||||||||||||||| Sbjct: 5452303 gaactgcaaaaacctttgatgtggaa 5452278
>ref|NM_194846.1| Oryza sativa (japonica cultivar-group) putative copia-type pol polyprotein (OSJNBb0016M10.4), mRNA Length = 3678 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtatt 611 ||||||||||||||||||||| Sbjct: 1226 ccacatatgtcaccttgtatt 1206
>gb|AC105743.8| Oryza sativa chromosome 3 BAC OSJNBa0035N15 genomic sequence, complete sequence Length = 171120 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtatt 611 ||||||||||||||||||||| Sbjct: 25627 ccacatatgtcaccttgtatt 25607
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 ccacatatgtcaccttgtatt 611 ||||||||||||||||||||| Sbjct: 18752258 ccacatatgtcaccttgtatt 18752278 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 aattggtctgaagtcatttg 397 |||||||||||||||||||| Sbjct: 21950227 aattggtctgaagtcatttg 21950208 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aaccgtcatctctgacctca 63 |||||||||||||||||||| Sbjct: 20622135 aaccgtcatctctgacctca 20622116 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 18831213 ccacatatgtcaccttgtat 18831194 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 15024498 ccacatatgtcaccttgtat 15024517
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtatt 611 ||||||||||||||||||||| Sbjct: 39466 ccacatatgtcaccttgtatt 39446
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tttgctgtcgtcctggccttg 25 ||||||||||||||||||||| Sbjct: 2310152 tttgctgtcgtcctggccttg 2310172
>gb|AY804257.1| Medicago truncatula purple acid phosphatase (PAP1) mRNA, complete cds Length = 1698 Score = 42.1 bits (21), Expect = 2.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 484 ggcttgaatgactttgtttcaccaaattcaggagcaaagccaatctcatggtttcca 540 |||||||||| |||||||| |||| ||| |||||||| ||| |||||||||||| Sbjct: 774 ggcttgaatggttttgtttctccaatttctggagcaaaatcaagttcatggtttcca 718
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtatt 611 ||||||||||||||||||||| Sbjct: 2858434 ccacatatgtcaccttgtatt 2858414
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 ccacatatgtcaccttgtatt 611 ||||||||||||||||||||| Sbjct: 18746299 ccacatatgtcaccttgtatt 18746319 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 aattggtctgaagtcatttg 397 |||||||||||||||||||| Sbjct: 21943256 aattggtctgaagtcatttg 21943237 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aaccgtcatctctgacctca 63 |||||||||||||||||||| Sbjct: 20615164 aaccgtcatctctgacctca 20615145 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 18825254 ccacatatgtcaccttgtat 18825235 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 15019032 ccacatatgtcaccttgtat 15019051
>gb|AC118223.11| Mus musculus chromosome 7, clone RP23-337G6, complete sequence Length = 196119 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 596 tatgtcaccttgtattatcat 616 ||||||||||||||||||||| Sbjct: 38860 tatgtcaccttgtattatcat 38880
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtatt 611 ||||||||||||||||||||| Sbjct: 2858385 ccacatatgtcaccttgtatt 2858365
>dbj|AB023387.1| Oryza sativa mRNA for acid phosphatase, partial cds Length = 223 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 499 gtttcaccaaattcaggagcaaagccaatctcatggtttcc 539 |||||||||| ||| |||||||| |||| ||||||||||| Sbjct: 83 gtttcaccaatttctggagcaaaatcaatttcatggtttcc 43
>ref|XM_472628.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4131 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 1421 ccacatatgtcaccttgtat 1402
>gb|AC115688.8| Oryza sativa chromosome 3 BAC OJ1324_A07 genomic sequence, complete sequence Length = 114629 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 36100 ccacatatgtcaccttgtat 36119
>ref|XM_709303.1| Candida albicans SC5314 hypothetical protein (CaO19.1750), mRNA Length = 600 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tcttctttcttcaactcttg 304 |||||||||||||||||||| Sbjct: 425 tcttctttcttcaactcttg 406
>ref|XM_709302.1| Candida albicans SC5314 hypothetical protein (CaO19.1749), mRNA Length = 528 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tcttctttcttcaactcttg 304 |||||||||||||||||||| Sbjct: 17 tcttctttcttcaactcttg 36
>ref|XM_709263.1| Candida albicans SC5314 hypothetical protein (CaO19.9319), mRNA Length = 600 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tcttctttcttcaactcttg 304 |||||||||||||||||||| Sbjct: 425 tcttctttcttcaactcttg 406
>ref|XM_709262.1| Candida albicans SC5314 hypothetical protein (CaO19.9318), mRNA Length = 528 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tcttctttcttcaactcttg 304 |||||||||||||||||||| Sbjct: 17 tcttctttcttcaactcttg 36
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 acatattttccgccttcttt 240 |||||||||||||||||||| Sbjct: 1568545 acatattttccgccttcttt 1568564
>gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genomic sequence, complete sequence Length = 152417 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aaccgtcatctctgacctca 63 |||||||||||||||||||| Sbjct: 35892 aaccgtcatctctgacctca 35873
>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete sequence Length = 137184 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 18264 ccacatatgtcaccttgtat 18245
>ref|XM_805471.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503703.10) partial mRNA Length = 1137 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccatgcttgaaatgatgttg 107 |||||||||||||||||||| Sbjct: 380 ccatgcttgaaatgatgttg 399
>gb|AE014262.1| Streptococcus agalactiae 2603V/R section 72 of 100 of the complete genome Length = 22602 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 acatattttccgccttcttt 240 |||||||||||||||||||| Sbjct: 20735 acatattttccgccttcttt 20754
>emb|BX548155.1|OSJN00293 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0041A24, complete sequence Length = 50879 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 22468 ccacatatgtcaccttgtat 22487
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtcgacggctttcgccttga 44 |||||||||||||||||||| Sbjct: 120630 gtcgacggctttcgccttga 120611
>emb|AL766852.1|SAG766852 Streptococcus agalactiae NEM316 complete genome, segment 10 Length = 174050 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 acatattttccgccttcttt 240 |||||||||||||||||||| Sbjct: 45576 acatattttccgccttcttt 45595
>emb|AL033502.1|CAC38F10 C.albicans cosmid Ca38F10 Length = 39871 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tcttctttcttcaactcttg 304 |||||||||||||||||||| Sbjct: 30161 tcttctttcttcaactcttg 30180
>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048F08, from chromosome 3, complete sequence Length = 155790 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 130275 ccacatatgtcaccttgtat 130256
>gb|AC150891.3| Medicago truncatula chromosome 2 BAC clone mth2-76a9, complete sequence Length = 142579 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 atgacaattgacaaaagaaa 166 |||||||||||||||||||| Sbjct: 79355 atgacaattgacaaaagaaa 79374
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 22077776 ccacatatgtcaccttgtat 22077795
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 aattggtctgaagtcatttg 397 |||||||||||||||||||| Sbjct: 17537788 aattggtctgaagtcatttg 17537807
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 6158837 ccacatatgtcaccttgtat 6158818
>gb|AC135560.4| Oryza sativa chromosome 3 BAC OSJNBa0031I04 genomic sequence, complete sequence Length = 168859 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 168428 ccacatatgtcaccttgtat 168447
>gb|AC024255.22|AC024255 Homo sapiens 12 BAC RP11-31A23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165236 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 ctttgtttcaccaaattcag 514 |||||||||||||||||||| Sbjct: 116942 ctttgtttcaccaaattcag 116961
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 aattggtctgaagtcatttg 397 |||||||||||||||||||| Sbjct: 58789 aattggtctgaagtcatttg 58808
>dbj|AP005779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0042J07 Length = 126938 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 61847 ccacatatgtcaccttgtat 61828
>dbj|AP003931.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1664_D08 Length = 128553 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ccacatatgtcaccttgtat 610 |||||||||||||||||||| Sbjct: 33392 ccacatatgtcaccttgtat 33373
>ref|XM_308398.2| Anopheles gambiae str. PEST ENSANGP00000019107 (ENSANGG00000016618), partial mRNA Length = 7668 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 atggtgatgaatgtcacctc 366 |||||||||||||||||||| Sbjct: 6397 atggtgatgaatgtcacctc 6416
>emb|CT573313.6| H.melpomene DNA sequence from clone AEHM-46M10, complete sequence Length = 112576 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 638 atgttaggtcctagaagaaa 657 |||||||||||||||||||| Sbjct: 32492 atgttaggtcctagaagaaa 32511
>gb|AC175116.2| Mus musculus BAC clone RP23-396H16 from chromosome 5, complete sequence Length = 210409 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 aatcctcttctttcttcaactctt 303 ||||||||| |||||||||||||| Sbjct: 205003 aatcctcttatttcttcaactctt 204980
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 aattggtctgaagtcatttg 397 |||||||||||||||||||| Sbjct: 17492159 aattggtctgaagtcatttg 17492178
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162200 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 aattggtctgaagtcatttg 397 |||||||||||||||||||| Sbjct: 30124 aattggtctgaagtcatttg 30143
>gb|AC171500.2| Mus musculus BAC clone RP24-67A10 from chromosome 5, complete sequence Length = 185497 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 aatcctcttctttcttcaactctt 303 ||||||||| |||||||||||||| Sbjct: 7108 aatcctcttatttcttcaactctt 7085
>emb|AL627130.13| Mouse DNA sequence from clone RP23-442A20 on chromosome 4, complete sequence Length = 185761 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcttctttcttcaactctt 303 |||||||||||||||||||| Sbjct: 31984 ctcttctttcttcaactctt 32003 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,543,430 Number of Sequences: 3902068 Number of extensions: 6543430 Number of successful extensions: 150065 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 149432 Number of HSP's gapped (non-prelim): 626 length of query: 711 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 688 effective length of database: 17,143,297,704 effective search space: 11794588820352 effective search space used: 11794588820352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
