Clone Name | rbasd17p11 |
---|---|
Clone Library Name | barley_pub |
>GUN_PHAVU (P22503) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Abscission cellulase) Length = 496 Score = 40.8 bits (94), Expect = 0.002 Identities = 17/38 (44%), Positives = 26/38 (68%) Frame = -2 Query: 521 MVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISL 408 +V GPD +D F D R++Y++ EPT NA VA++ +L Sbjct: 455 IVGGPDSNDRFNDARSDYSHAEPTTYINAAFVASISAL 492
>GUN2_PERAE (P23666) Endoglucanase 2 (EC 3.2.1.4) (Endo-1,4-beta-glucanase)| (Abscission cellulase 2) (Fragment) Length = 130 Score = 38.1 bits (87), Expect = 0.015 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = -2 Query: 521 MVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISLA 405 ++ GPD D F D R NY +EP NA LV AL A Sbjct: 86 ILGGPDSRDSFSDDRNNYQQSEPATYINAPLVGALAFFA 124
>GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Abscission cellulase 1) Length = 494 Score = 38.1 bits (87), Expect = 0.015 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = -2 Query: 521 MVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISLA 405 ++ GPD D F D R NY +EP NA LV AL A Sbjct: 450 ILGGPDNRDSFSDDRNNYQQSEPATYINAPLVGALAFFA 488
>GUN9_ARATH (Q9C9H5) Probable family 9 endoglucanase At1g71380 precursor (EC| 3.2.1.4) Length = 484 Score = 35.0 bits (79), Expect = 0.13 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = -2 Query: 521 MVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISLA 405 +V GP+++DG+ D R +Y++ EP NA V L A Sbjct: 441 IVGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPLAYFA 479
>GUN6_DICDI (P22699) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Spore germination protein 270-6) (Cellulase) Length = 705 Score = 33.5 bits (75), Expect = 0.36 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = -2 Query: 521 MVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISLAD 402 +V GP +D + D RT+Y E NAG V AL SL + Sbjct: 416 LVGGPGSNDEYTDDRTDYISNEVATDYNAGFVGALASLVN 455
>GUNG_CLOCE (P37700) Endoglucanase G precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase G) (Cellulase G) (EGCCG) Length = 725 Score = 30.4 bits (67), Expect = 3.1 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -2 Query: 521 MVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISL 408 +V GPD DG+ D NY E NAG AL + Sbjct: 434 LVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAKM 471
>GUNZ_CLOSR (P23659) Endoglucanase Z precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Thermoactive cellulase) (Avicelase I) Length = 986 Score = 29.6 bits (65), Expect = 5.3 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -2 Query: 521 MVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISL 408 +V GP K D + D NY E NAG V AL + Sbjct: 426 LVGGPGKDDSYTDDINNYINNEVACDYNAGFVGALAKM 463
>REL_CHICK (P16236) C-Rel proto-oncogene protein (C-Rel protein) (p68)| Length = 598 Score = 29.6 bits (65), Expect = 5.3 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -3 Query: 370 TPSSQQFPQCSRHPHHRRQLG 308 T SSQ +P CS+ PH QLG Sbjct: 349 TSSSQMYPPCSQMPHQPAQLG 369
>GUNI_CLOTM (Q02934) Endoglucanase 1 precursor (EC 3.2.1.4) (Endoglucanase I)| (EGI) (Endo-1,4-beta-glucanase) (Cellulase I) Length = 879 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = -2 Query: 521 MVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISL 408 +V GPD D + D +NY E NAG V L + Sbjct: 474 LVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKM 511
>BMS1_HUMAN (Q14692) Ribosome biogenesis protein BMS1 homolog| Length = 1282 Score = 29.3 bits (64), Expect = 6.9 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Frame = -3 Query: 373 RTPSSQQFPQCSRHPHHRRQLGNLEESDS*TFHKHQMEGATDGCLIYSKDH---KQKADN 203 + P ++ P R PH R+ L L+ T H +M+ A + +++K+H KQK + Sbjct: 1188 KVPKDRRRPAVIREPHERKILALLDALS--TVHSQKMKKAKEQRHLHNKEHFRAKQKEEE 1245 Query: 202 ISLQ 191 L+ Sbjct: 1246 EKLK 1249
>EXOC2_DROME (Q9VQQ9) Exocyst complex component 2 (Exocyst complex component| Sec5) Length = 894 Score = 28.9 bits (63), Expect = 9.0 Identities = 12/42 (28%), Positives = 20/42 (47%) Frame = -2 Query: 140 PWTGSCVRFVKLNFEVLVVLHIPSSRVKFFL*KWYLCKSFCF 15 PW C+RF ++ + L+ L +PS + + FCF Sbjct: 510 PWIPQCLRFTRIAYATLISLDLPSEALDIIQKLIDEVRLFCF 551
>MURA2_PROMA (Q7VAC5) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC| 2.5.1.7) (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2) Length = 427 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/36 (41%), Positives = 25/36 (69%) Frame = -3 Query: 277 HKHQMEGATDGCLIYSKDHKQKADNISLQSFYFCIG 170 +K+Q+E T G ++SKD +A + SL++ +FCIG Sbjct: 64 NKNQLEIMTSGLSLFSKDLSCEAFH-SLRASFFCIG 98
>PHF3_HUMAN (Q92576) PHD finger protein 3| Length = 2039 Score = 28.9 bits (63), Expect = 9.0 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = -3 Query: 361 SQQFPQCSRHPHHRRQLGNLEESDS*TFHKHQME 260 S P C + PHH Q G++ S HK Q + Sbjct: 600 SHAHPGCLKEPHHPAQTGHVSHSSQKQCHKPQQQ 633
>ILVD_BLOFL (Q7VRL8) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 618 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = +1 Query: 196 SLCCLLSVYGLCCISNNHLLLPPFDAYEMFRN 291 S+ CL+ V GL N LL FD EMF N Sbjct: 207 SMNCLMEVLGLAQPGNGSLLATHFDRKEMFLN 238 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,760,362 Number of Sequences: 219361 Number of extensions: 1387685 Number of successful extensions: 3335 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3246 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3335 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)