Clone Name	rbasd17p08
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK070082.1| Oryza sativa (japonica cultivar-group) cDNA clon...	188	1e-44
2	ref|NM_188722.1| Oryza sativa (japonica cultivar-group), predic...	165	2e-37
3	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	139	9e-30
4	dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic D...	139	9e-30
5	gb|BC094393.1| Mus musculus RIKEN cDNA 1110005A23 gene, mRNA (cD...	42	1.6
6	ref|NM_025364.1| Mus musculus RIKEN cDNA 1110005A23 gene (111000...	42	1.6
7	ref|XM_991289.1| PREDICTED: Mus musculus similar to cytokine ind...	42	1.6
8	ref|XM_924323.2| PREDICTED: Mus musculus similar to cytokine ind...	42	1.6
9	ref|XM_899946.2| PREDICTED: Mus musculus similar to cytokine ind...	42	1.6
10	gb|AC132088.4| Mus musculus BAC clone RP24-410M8 from chromosome...	42	1.6
11	gb|AC134830.2| Mus musculus BAC clone RP24-498G16 from chromosom...	42	1.6
12	emb|AL359853.18| Human DNA sequence from clone RP11-12M5 on chro...	42	1.6
13	dbj|AK146248.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length...	42	1.6
14	dbj|AK003453.1| Mus musculus 18-day embryo whole body cDNA, RIKE...	42	1.6
15	dbj|AK088266.1| Mus musculus 2 days neonate thymus thymic cells ...	42	1.6
16	dbj|AK018773.1| Mus musculus adult male cerebellum cDNA, RIKEN f...	42	1.6
17	emb|AL732501.8| Mouse DNA sequence from clone RP23-325I22 on chr...	42	1.6
18	gb|BC027510.1| Mus musculus RIKEN cDNA 1110005A23 gene, mRNA (cD...	42	1.6
19	gb|BC100070.1| Rattus norvegicus similar to RIKEN cDNA 1110005A2...	42	1.6
20	ref|NM_001033070.1| Rattus norvegicus similar to RIKEN cDNA 1110...	42	1.6
21	gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome	40	6.4
22	gb|AY617967.1| Sterkiella histriomuscorum clone UGC1O0006_K18_F ...	40	6.4
23	gb|CP000284.1| Methylobacillus flagellatus KT, complete genome	40	6.4
24	emb|AL390997.10| Human DNA sequence from clone RP11-159G6 on chr...	40	6.4
25	emb|AL137839.6| Human DNA sequence from clone RP3-471C18 on chro...	40	6.4
26	emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in...	40	6.4
27	dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome	40	6.4
28	gb|AC098719.3| Mus musculus clone RP23-2M3, complete sequence	40	6.4
29	emb|AL954696.17| Zebrafish DNA sequence from clone CH211-234K4, ...	40	6.4
30	gb|AC073063.12| Homo sapiens BAC clone RP11-136B3 from 7, comple...	40	6.4
31	dbj|AK156103.1| Mus musculus activated spleen cDNA, RIKEN full-l...	40	6.4
32	gb|AC079345.5| Homo sapiens BAC clone RP11-181C18 from 4, comple...	40	6.4
33	gb|BC109532.1| Bos taurus cDNA clone MGC:133754 IMAGE:8056746, c...	40	6.4
34	gb|AC159643.2| Mus musculus BAC clone RP23-384H10 from chromosom...	40	6.4
35	gb|AC104088.6| Homo sapiens BAC clone RP11-744C22 from 2, comple...	40	6.4
36	gb|AC146422.4| Pan troglodytes BAC clone RP43-27K9 from chromoso...	40	6.4
37	gb|AC153655.4| Mus musculus BAC clone RP23-451K20 from chromosom...	40	6.4
38	emb|BX004839.9| Zebrafish DNA sequence from clone DKEY-18A23 in ...	40	6.4
39	gb|AC007894.2|F21H2 Arabidopsis thaliana chromosome 1 BAC F21H2 ...	40	6.4
40	gb|AC140425.3| Mus musculus BAC clone RP24-97E12 from 1, complet...	40	6.4
41	gb|AC147644.3| Gallus gallus BAC clone CH261-77K20 from chromoso...	40	6.4
42	gb|AC149588.4| Mus musculus BAC clone RP23-366I10 from 15, compl...	40	6.4
43	emb|CT030154.8| Mouse DNA sequence from clone RP23-387H3 on chro...	40	6.4
44	emb|AL808126.10| Mouse DNA sequence from clone RP23-37B4 on chro...	40	6.4
45	emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chro...	40	6.4
46	emb|AL645856.5| Mouse DNA sequence from clone RP23-151N19 on chr...	40	6.4

---

>dbj|AK070082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044E02, full
           insert sequence
          Length = 960

 Score =  188 bits (95), Expect = 1e-44
 Identities = 168/193 (87%)
 Strand = Plus / Minus

                                                                       
Query: 280 atcaagcaggtgttgcttccttgctgctatctgccacattgacacctttgaagttcaata 339
           ||||||||||||||||| |||||||||| |||||  |||  ||||||||||||||||| |
Sbjct: 618 atcaagcaggtgttgctgccttgctgctttctgctccatgaacacctttgaagttcaaga 559

                                                                       
Query: 340 ttccanaaaggcctcgtcctttggcgaggcgctcaagttcagcaagcttcagcttgagct 399
           ||||  |||||||||||||||| |||||| |||||| |||||||||| |||| || || |
Sbjct: 558 ttcctgaaaggcctcgtcctttagcgaggtgctcaatttcagcaagcctcagtttaagat 499

                                                                       
Query: 400 cttctaaatctttagctaaaatctcttccttttgtctcagttcctcaagttnctgtttac 459
           | || |||||||||| |||| ||||||||  |||| ||| ||||||||||| ||||||||
Sbjct: 498 cctccaaatctttagataaactctcttcccgttgtttcaattcctcaagttcctgtttac 439

                        
Query: 460 gagcttcctcctt 472
           |||||||||||||
Sbjct: 438 gagcttcctcctt 426



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 134 tttgatccattcacccaaagaatgggcatggc 165
           |||||||||| |||| ||||||||||||||||
Sbjct: 762 tttgatccatacaccaaaagaatgggcatggc 731

---

>ref|NM_188722.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 720

 Score =  165 bits (83), Expect = 2e-37
 Identities = 167/195 (85%), Gaps = 3/195 (1%)
 Strand = Plus / Minus

                                                                       
Query: 281 tcaagcaggtgttgcttccttgctgctatctgccacattgacacctttgaagttcaatat 340
           |||||||||||||||| |||||||||| |||||  |||  ||||||||||||||||| ||
Sbjct: 720 tcaagcaggtgttgctgccttgctgctttctgctccatgaacacctttgaagttcaagat 661

                                                                       
Query: 341 tccanaaaggcctcgtcctttggcgaggcgctcaagttcagcaagcttcagcttgagctc 400
           |||  |||||||||||||||| |||||| |||||| |||||||||| |||| || || ||
Sbjct: 660 tcctgaaaggcctcgtcctttagcgaggtgctcaatttcagcaagcctcagtttaagatc 601

                                                                       
Query: 401 ttctaaatctttagctaaaatctcttccttttgtctcagtt---cctcaagttnctgttt 457
            || |||||||||| |||| ||||||||  |||| ||| ||   ||||||||| ||||||
Sbjct: 600 ctccaaatctttagataaactctcttcccgttgtttcaattccacctcaagttcctgttt 541

                          
Query: 458 acgagcttcctcctt 472
           |||||||||||||||
Sbjct: 540 acgagcttcctcctt 526

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  139 bits (70), Expect = 9e-30
 Identities = 129/149 (86%)
 Strand = Plus / Minus

                                                                           
Query: 280     atcaagcaggtgttgcttccttgctgctatctgccacattgacacctttgaagttcaata 339
               ||||||||||||||||| |||||||||| |||||  |||  ||||||||||||||||| |
Sbjct: 7854418 atcaagcaggtgttgctgccttgctgctttctgctccatgaacacctttgaagttcaaga 7854359

                                                                           
Query: 340     ttccanaaaggcctcgtcctttggcgaggcgctcaagttcagcaagcttcagcttgagct 399
               ||||  |||||||||||||||| |||||| |||||| |||||||||| |||| || || |
Sbjct: 7854358 ttcctgaaaggcctcgtcctttagcgaggtgctcaatttcagcaagcctcagtttaagat 7854299

                                            
Query: 400     cttctaaatctttagctaaaatctcttcc 428
               | || |||||||||| |||| ||||||||
Sbjct: 7854298 cctccaaatctttagataaactctcttcc 7854270



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                              
Query: 442     cctcaagttnctgtttacgagcttcctcctt 472
               ||||||||| |||||||||||||||||||||
Sbjct: 7853151 cctcaagttcctgtttacgagcttcctcctt 7853121



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                               
Query: 134     tttgatccattcacccaaagaatgggcatggc 165
               |||||||||| |||| ||||||||||||||||
Sbjct: 7854562 tttgatccatacaccaaaagaatgggcatggc 7854531

---

>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1066G12
          Length = 136263

 Score =  139 bits (70), Expect = 9e-30
 Identities = 129/149 (86%)
 Strand = Plus / Minus

                                                                         
Query: 280   atcaagcaggtgttgcttccttgctgctatctgccacattgacacctttgaagttcaata 339
             ||||||||||||||||| |||||||||| |||||  |||  ||||||||||||||||| |
Sbjct: 49364 atcaagcaggtgttgctgccttgctgctttctgctccatgaacacctttgaagttcaaga 49305

                                                                         
Query: 340   ttccanaaaggcctcgtcctttggcgaggcgctcaagttcagcaagcttcagcttgagct 399
             ||||  |||||||||||||||| |||||| |||||| |||||||||| |||| || || |
Sbjct: 49304 ttcctgaaaggcctcgtcctttagcgaggtgctcaatttcagcaagcctcagtttaagat 49245

                                          
Query: 400   cttctaaatctttagctaaaatctcttcc 428
             | || |||||||||| |||| ||||||||
Sbjct: 49244 cctccaaatctttagataaactctcttcc 49216



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 442   cctcaagttnctgtttacgagcttcctcctt 472
             ||||||||| |||||||||||||||||||||
Sbjct: 48097 cctcaagttcctgtttacgagcttcctcctt 48067



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 134   tttgatccattcacccaaagaatgggcatggc 165
             |||||||||| |||| ||||||||||||||||
Sbjct: 49508 tttgatccatacaccaaaagaatgggcatggc 49477

---

>gb|BC094393.1| Mus musculus RIKEN cDNA 1110005A23 gene, mRNA (cDNA clone
           IMAGE:30550736), with apparent retained intron
          Length = 1097

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 agttcagcaagcttcagcttg 395
           |||||||||||||||||||||
Sbjct: 51  agttcagcaagcttcagcttg 31

---

>ref|NM_025364.1| Mus musculus RIKEN cDNA 1110005A23 gene (1110005A23Rik), mRNA
          Length = 893

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 agttcagcaagcttcagcttg 395
           |||||||||||||||||||||
Sbjct: 64  agttcagcaagcttcagcttg 44

---

>ref|XM_991289.1| PREDICTED: Mus musculus similar to cytokine induced protein 29 kDa
           (LOC636633), mRNA
          Length = 866

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 agttcagcaagcttcagcttg 395
           |||||||||||||||||||||
Sbjct: 83  agttcagcaagcttcagcttg 63

---

>ref|XM_924323.2| PREDICTED: Mus musculus similar to cytokine induced protein 29 kDa,
           transcript variant 2 (LOC636633), mRNA
          Length = 866

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 agttcagcaagcttcagcttg 395
           |||||||||||||||||||||
Sbjct: 83  agttcagcaagcttcagcttg 63

---

>ref|XM_899946.2| PREDICTED: Mus musculus similar to cytokine induced protein 29 kDa,
           transcript variant 2 (LOC625193), mRNA
          Length = 866

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 agttcagcaagcttcagcttg 395
           |||||||||||||||||||||
Sbjct: 83  agttcagcaagcttcagcttg 63

---

>gb|AC132088.4| Mus musculus BAC clone RP24-410M8 from chromosome 19, complete sequence
          Length = 159681

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 375   agttcagcaagcttcagcttg 395
             |||||||||||||||||||||
Sbjct: 30718 agttcagcaagcttcagcttg 30738

---

>gb|AC134830.2| Mus musculus BAC clone RP24-498G16 from chromosome 19, complete
             sequence
          Length = 155666

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   agttcagcaagcttcagcttg 395
             |||||||||||||||||||||
Sbjct: 27141 agttcagcaagcttcagcttg 27121

---

>emb|AL359853.18| Human DNA sequence from clone RP11-12M5 on chromosome 1 Contains five
             novel genes and a CpG island, complete sequence
          Length = 173031

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    ctattatttcatcaggatgtc 111
             |||||||||||||||||||||
Sbjct: 76847 ctattatttcatcaggatgtc 76827

---

>dbj|AK146248.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library,
           clone:I730042C22 product:Nuclear protein Hcc-1, full
           insert sequence
          Length = 919

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 agttcagcaagcttcagcttg 395
           |||||||||||||||||||||
Sbjct: 90  agttcagcaagcttcagcttg 70

---

>dbj|AK003453.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110005A23 product:hypothetical
           SAP domain containing protein, full insert sequence
          Length = 893

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 agttcagcaagcttcagcttg 395
           |||||||||||||||||||||
Sbjct: 64  agttcagcaagcttcagcttg 44

---

>dbj|AK088266.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430008O03
           product:NUCLEAR PROTEIN HCC-1 homolog [Mus musculus],
           full insert sequence
          Length = 890

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 agttcagcaagcttcagcttg 395
           |||||||||||||||||||||
Sbjct: 61  agttcagcaagcttcagcttg 41

---

>dbj|AK018773.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
           library, clone:1500016M05 product:NUCLEAR PROTEIN HCC-1
           homolog [Mus musculus], full insert sequence
          Length = 620

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 agttcagcaagcttcagcttg 395
           |||||||||||||||||||||
Sbjct: 75  agttcagcaagcttcagcttg 55

---

>emb|AL732501.8| Mouse DNA sequence from clone RP23-325I22 on chromosome X, complete
              sequence
          Length = 206856

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 167    atagtatcaaagaactgtgacagaa 191
              ||||||||||| |||||||||||||
Sbjct: 193329 atagtatcaaaaaactgtgacagaa 193353

---

>gb|BC027510.1| Mus musculus RIKEN cDNA 1110005A23 gene, mRNA (cDNA clone MGC:41057
           IMAGE:1382354), complete cds
          Length = 908

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 agttcagcaagcttcagcttg 395
           |||||||||||||||||||||
Sbjct: 51  agttcagcaagcttcagcttg 31

---

>gb|BC100070.1| Rattus norvegicus similar to RIKEN cDNA 1110005A23, mRNA (cDNA
           clone MGC:112623 IMAGE:7385206), complete cds
          Length = 1244

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 agttcagcaagcttcagcttg 395
           |||||||||||||||||||||
Sbjct: 205 agttcagcaagcttcagcttg 185

---

>ref|NM_001033070.1| Rattus norvegicus similar to RIKEN cDNA 1110005A23 (RGD1305692),
           mRNA
          Length = 1244

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 agttcagcaagcttcagcttg 395
           |||||||||||||||||||||
Sbjct: 205 agttcagcaagcttcagcttg 185

---

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    cctttggcgaggcgctcaag 376
              ||||||||||||||||||||
Sbjct: 988440 cctttggcgaggcgctcaag 988421

---

>gb|AY617967.1| Sterkiella histriomuscorum clone UGC1O0006_K18_F genomic sequence
          Length = 739

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 383 aagcttcagcttgagctctt 402
           ||||||||||||||||||||
Sbjct: 485 aagcttcagcttgagctctt 504

---

>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 296     ttccttgctgctatctgcca 315
               ||||||||||||||||||||
Sbjct: 2412049 ttccttgctgctatctgcca 2412068

---

>emb|AL390997.10| Human DNA sequence from clone RP11-159G6 on chromosome Xq21.33-23,
             complete sequence
          Length = 112328

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   ctcttctaaatctttagcta 417
             ||||||||||||||||||||
Sbjct: 81612 ctcttctaaatctttagcta 81593

---

>emb|AL137839.6| Human DNA sequence from clone RP3-471C18 on chromosome 6 Contains the
             3' end of two novel genes, complete sequence
          Length = 108793

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   ctaaaatctcttccttttgt 434
             ||||||||||||||||||||
Sbjct: 29273 ctaaaatctcttccttttgt 29254

---

>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3,
             complete sequence
          Length = 241961

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   cccccttctcctgaccaaag 267
             ||||||||||||||||||||
Sbjct: 12188 cccccttctcctgaccaaag 12169

---

>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome
          Length = 1166239

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 408     tctttagctaaaatctcttc 427
               ||||||||||||||||||||
Sbjct: 1000739 tctttagctaaaatctcttc 1000758

---

>gb|AC098719.3| Mus musculus clone RP23-2M3, complete sequence
          Length = 219626

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   acagaagaaaccaattagcc 205
             ||||||||||||||||||||
Sbjct: 14879 acagaagaaaccaattagcc 14860

---

>emb|AL954696.17| Zebrafish DNA sequence from clone CH211-234K4, complete sequence
          Length = 149858

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     caatcacactattatttcat 102
              ||||||||||||||||||||
Sbjct: 141997 caatcacactattatttcat 141978

---

>gb|AC073063.12| Homo sapiens BAC clone RP11-136B3 from 7, complete sequence
          Length = 84113

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   agttcagcaagcttcagctt 394
             ||||||||||||||||||||
Sbjct: 72997 agttcagcaagcttcagctt 72978

---

>dbj|AK156103.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830008B03 product:unclassifiable, full
           insert sequence
          Length = 2945

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 380 agcaagcttcagcttgagctcttc 403
           |||| |||||||||||||||||||
Sbjct: 611 agcatgcttcagcttgagctcttc 634

---

>gb|AC079345.5| Homo sapiens BAC clone RP11-181C18 from 4, complete sequence
          Length = 171325

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   atctcttccttttgtctcag 439
             ||||||||||||||||||||
Sbjct: 72070 atctcttccttttgtctcag 72089

---

>gb|BC109532.1| Bos taurus cDNA clone MGC:133754 IMAGE:8056746, complete cds
          Length = 912

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 375 agttcagcaagcttcagctt 394
           ||||||||||||||||||||
Sbjct: 61  agttcagcaagcttcagctt 42

---

>gb|AC159643.2| Mus musculus BAC clone RP23-384H10 from chromosome 12, complete sequence
          Length = 200939

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    agaagaaaccaattagccaa 207
              ||||||||||||||||||||
Sbjct: 130601 agaagaaaccaattagccaa 130620

---

>gb|AC104088.6| Homo sapiens BAC clone RP11-744C22 from 2, complete sequence
          Length = 158746

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    agaactgtgacagaagaaac 196
              ||||||||||||||||||||
Sbjct: 110230 agaactgtgacagaagaaac 110211

---

>gb|AC146422.4| Pan troglodytes BAC clone RP43-27K9 from chromosome 7, complete sequence
          Length = 189507

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    agttcagcaagcttcagctt 394
              ||||||||||||||||||||
Sbjct: 134804 agttcagcaagcttcagctt 134823

---

>gb|AC153655.4| Mus musculus BAC clone RP23-451K20 from chromosome 1, complete sequence
          Length = 167208

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     ctttatatcttgttctgtgg 46
              ||||||||||||||||||||
Sbjct: 121466 ctttatatcttgttctgtgg 121447

---

>emb|BX004839.9| Zebrafish DNA sequence from clone DKEY-18A23 in linkage group 6,
            complete sequence
          Length = 223000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  aggatgtctaatggatcaac 123
            ||||||||||||||||||||
Sbjct: 1532 aggatgtctaatggatcaac 1513

---

>gb|AC007894.2|F21H2 Arabidopsis thaliana chromosome 1 BAC F21H2 sequence, complete sequence
          Length = 88512

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    tcacacaatcacactattat 97
             ||||||||||||||||||||
Sbjct: 51436 tcacacaatcacactattat 51455

---

>gb|AC140425.3| Mus musculus BAC clone RP24-97E12 from 1, complete sequence
          Length = 187415

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ctttatatcttgttctgtgg 46
             ||||||||||||||||||||
Sbjct: 43576 ctttatatcttgttctgtgg 43557

---

>gb|AC147644.3| Gallus gallus BAC clone CH261-77K20 from chromosome unknown, complete
             sequence
          Length = 191888

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 427   ccttttgtctcagttcctcaagtt 450
             |||||| |||||||||||||||||
Sbjct: 94693 ccttttctctcagttcctcaagtt 94716

---

>gb|AC149588.4| Mus musculus BAC clone RP23-366I10 from 15, complete sequence
          Length = 200656

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   acagaagaaaccaattagcc 205
             ||||||||||||||||||||
Sbjct: 23692 acagaagaaaccaattagcc 23711

---

>emb|CT030154.8| Mouse DNA sequence from clone RP23-387H3 on chromosome 12, complete
              sequence
          Length = 213294

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 188    agaagaaaccaattagccaa 207
              ||||||||||||||||||||
Sbjct: 164497 agaagaaaccaattagccaa 164478

---

>emb|AL808126.10| Mouse DNA sequence from clone RP23-37B4 on chromosome 2, complete
             sequence
          Length = 94874

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   tcaagcaggtgttgcttcct 300
             ||||||||||||||||||||
Sbjct: 85686 tcaagcaggtgttgcttcct 85705

---

>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete
              sequence
          Length = 195413

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     tttcatcaggatgtctaatg 116
              ||||||||||||||||||||
Sbjct: 120066 tttcatcaggatgtctaatg 120047

---

>emb|AL645856.5| Mouse DNA sequence from clone RP23-151N19 on chromosome 11, complete
              sequence
          Length = 116300

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 380    agcaagcttcagcttgagctcttc 403
              |||| |||||||||||||||||||
Sbjct: 107498 agcatgcttcagcttgagctcttc 107521


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,605,821
Number of Sequences: 3902068
Number of extensions: 4605821
Number of successful extensions: 129992
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129846
Number of HSP's gapped (non-prelim): 145
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---